Last modified on 23 March 2007.
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rRNA Conservation Diagrams:
| Phylogeny | 5S | 16S | 23S | ||||||
|---|---|---|---|---|---|---|---|---|---|
| RSD | CD | #S | RSD | CD | #S | RSD | CD | #S | |
| * root (3DOM+2ORG) | 5S | 5S | 686 | 16S | 16S | 6389 | 23S-5 23S-3 | 23S-5 23S-3 | 922 |
| * root | 5S | 5S | 678 | 16S | 16S | 5591 | 23S-5 23S-3 | 23S-5 23S-3 | 585 |
| * Archaea | 5S | 5S | 53 | 16S | 16S | 171 | 23S-5 23S-3 | 23S-5 23S-3 | 39 |
| * Bacteria | 5S | 5S | 323 | 16S | 16S | 4213 | 23S-5 23S-3 | 23S-5 23S-3 | 431 |
| * Firmicutes | 5S | 5S | 125 | -- | -- | -- | -- | -- | -- |
| * Actinobacteria | 5S | 5S | 55 | -- | -- | -- | -- | -- | -- |
| * Bacillus/Clostridium group | 5S | 5S | 71 | -- | -- | -- | -- | -- | -- |
| * Proteobacteria | 5S | 5S* | 165 | 16S | 16S* | 1594 | 23S-5 23S-3 | 23S-5* 23S-3* | 164 |
| * Alphaproteobacteria | 5S | 5S* | 47 | -- | -- | -- | -- | -- | -- |
| * Betaproteobacteria | 5S | 5S* | 28 | -- | -- | -- | -- | -- | -- |
| * Gammaproteobacteria | 5S | 5S* | 82 | 16S | 16S* | 784 | 23S-5 23S-3 | 23S-5* 23S-3* | 78 |
| * Eukaryota | 5S | 5S | 299 | 16S | 16S | 1937 | 23S-5 23S-3 | 23S-5 23S-3 | 115 |
| * Acanthamoebidae | -- | -- | -- | 16S | 16S | 132 | -- | -- | -- |
| * Coccidia | -- | -- | -- | 16S | 16S | 125 | -- | -- | -- |
| * Entamoebidae | -- | -- | -- | 16S | 16S | 17 | -- | -- | -- |
| * Giardiinae | -- | -- | -- | 16S | 16S | 18 | -- | -- | -- |
| * Haemosporida | -- | -- | -- | 16S | 16S | 24 | -- | -- | -- |
| * Haplosporida | -- | -- | -- | 16S | 16S | 10 | -- | -- | -- |
| * Heterolobosea | -- | -- | -- | 16S | 16S | 29 | -- | -- | -- |
| * Litostomatea (Ciliophora) | -- | -- | -- | 16S | 16S | 28 | -- | -- | -- |
| * Lobosea | -- | -- | -- | 16S | 16S | 58 | -- | -- | -- |
| * Microsporidia | -- | -- | -- | 16S | 16S | 200 | -- | -- | -- |
| * Parabasalidea | -- | -- | -- | 16S | 16S | 68 | -- | -- | -- |
| * Perkinsea | -- | -- | -- | 16S | 16S | 10 | -- | -- | -- |
| * Piroplasmida | -- | -- | -- | 16S | 16S | 106 | -- | -- | -- |
| * Bacillariophyta (stramenopiles) | -- | -- | -- | 16S | 16S | 181 | -- | -- | -- |
| * Blastocystis (stramenopiles) | -- | -- | -- | 16S | 16S | 49 | -- | -- | -- |
| * Oomycetes (stramenopiles) | -- | -- | -- | 16S | 16S | 19 | -- | -- | -- |
| * Trypanosomatidae (Euglenozoa) | -- | -- | -- | 16S | 16S | 174 | -- | -- | -- |
| * Eukaryota (C) | -- | -- | -- | 16S | 16S | 127 | 23S-5 23S-3 | 23S-5 23S-3 | 52 |
| * Eukaryota (M) | -- | -- | -- | 16S | 16S | 899 | 23S-5 23S-3 | 23S-5 23S-3 | 285 |
| * Mollusca (M) | -- | -- | -- | -- | -- | -- | 23S-5 23S-3 | 23S-5 23S-3 | 10 |
Intron RNA Conservation Diagrams:
| Grouping | RSD | CD | #S |
|---|---|---|---|
| Group IA Introns | I1 | I1 | 109 |
| Group IB Introns | I1 | I1 | 201 |
| Group IC1 Introns | I1 | I1 | 818 |
| Group IC2 Introns | I1 | I1 | 31 |
| Group IC3 Introns | I1 | I1 | 361 |
| Group IE Introns | I1 | I1 | 248 |
| Group IIA Introns | I2 | I2* | 172 |
| Group IIB Introns | I2 | I2* | 574 |
