Identified Basepairs and Their Conformations and Conformational Parameters
| RNA |
PDB |
Position |
bp |
bpC; LG [LW][Sanger] |
dCC |
<X ; <Y |
|<X - <Y| |
Torsion |
Z-Diff |
Buckle |
PDB Id: 1CSL
BPC Identified: 12
Ambiguities: 0
| vRNA |
1CSL |
43!A:77!B |
A:U |
sWC [---][-] |
11.68 |
14.46; 70.44 |
55.98 |
7.93 |
0.17 |
18.38 |
| vRNA |
1CSL |
44!A:76!B |
A:U |
WC [cWW][XX] |
10.82 |
49.72; 53.56 |
3.84 |
-18.68 |
0.51 |
24.75 |
| vRNA |
1CSL |
45!A:75!B |
C:G |
WC [cWW][XIX] |
10.68 |
54.66; 55.27 |
0.62 |
-15.87 |
0.61 |
24.19 |
| vRNA |
1CSL |
46!A:74!B |
G:C |
WC [cWW][XIX] |
10.67 |
55.3; 54.19 |
1.11 |
-11.72 |
0.42 |
20.94 |
| vRNA |
1CSL |
47!A:73!B |
G:A |
WC [cWW][VIII] |
12.83 |
44.47; 46.51 |
2.04 |
6.1 |
0.53 |
17.64 |
| vRNA |
1CSL |
48!A:71!B |
G:G |
H_1 [cWH][VI] |
11.4 |
63.81; 33.9 |
29.92 |
5.07 |
0.37 |
17.86 |
| vRNA |
1CSL |
49!A:70!B |
C:G |
WC [cWW][XIX] |
10.61 |
56.54; 55.34 |
1.19 |
-9.35 |
0.39 |
16.86 |
| vRNA |
1CSL |
50!A:69!B |
G:C |
WC [cWW][XIX] |
10.66 |
54.08; 55.79 |
1.71 |
-11.54 |
0.06 |
17.49 |
| vRNA |
1CSL |
51!A:67!B |
C:G |
WC [cWW][XIX] |
10.68 |
55.53; 54.01 |
1.52 |
-12.46 |
0.33 |
18.37 |
| vRNA |
1CSL |
52!A:66!B |
A:U |
WC [cWW][XX] |
10.92 |
53.0; 50.41 |
2.58 |
-10.82 |
0.15 |
16.04 |
| vRNA |
1CSL |
53!A:65!B |
G:C |
WC [cWW][XIX] |
10.78 |
53.47; 52.42 |
1.05 |
-17.44 |
0.41 |
23.94 |
| vRNA |
1CSL |
54!A:64!B |
A:U |
WC [cWW][XX] |
10.78 |
54.51; 51.76 |
2.75 |
-18.33 |
0.19 |
25.65 |