Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 1YY0 BPC Identified: 32 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
dsRNA 1YY0 1!A:16!B G:C Wb [---][-] 10.9 41.02; 55.79 14.77 -2.94 0.47 16.96
dsRNA 1YY0 2!A:15!B C:G WC [cWW][XIX] 10.5 54.96; 59.29 4.33 -12.4 0.33 9.98
dsRNA 1YY0 3!A:14!B A:U WC [cWW][XX] 9.93 60.75; 58.4 2.35 -15.69 0.3 22.1
dsRNA 1YY0 4!A:13!B G:C WC [cWW][XIX] 10.22 49.82; 61.38 11.57 -6.75 0.03 12.54
dsRNA 1YY0 5!A:12!B A:U WC [cWW][XX] 10.07 57.56; 58.77 1.21 -6.18 0.17 10.7
dsRNA 1YY0 6!A:11!B C:A Wb [cWW][-] 10.26 72.13; 47.71 24.42 -7.91 0.54 10.03
dsRNA 1YY0 7!A:10!B U:A WC [cWW][XX] 10.26 58.81; 54.19 4.61 -10.75 0.1 15.38
dsRNA 1YY0 8!A:9!B U:A Wb* [---][-] 10.3 50.72; 65.81 15.09 -7.79 0.28 13.13
dsRNA 1YY0 9!A:8!B A:U WC [cWW][XX] 10.17 52.42; 58.57 6.15 -5.59 0.13 8.7
dsRNA 1YY0 10!A:7!B A:U WC [cWW][XX] 10.42 52.5; 59.04 6.54 -6.35 0.22 4.36
dsRNA 1YY0 11!A:6!B A:C WC [---][-] 10.76 45.7; 59.6 13.89 -11.39 0.44 18.64
dsRNA 1YY0 12!A:5!B U:A WC [cWW][XX] 10.69 58.55; 55.1 3.45 -5.72 0.13 9.25
dsRNA 1YY0 13!A:4!B C:G WC [cWW][XIX] 10.88 55.14; 55.27 0.13 -4.56 0.22 21.56
dsRNA 1YY0 14!A:3!B U:A WC [cWW][XX] 10.34 52.72; 59.73 7.01 -2.72 0.4 4.91
dsRNA 1YY0 15!A:2!B G:C WC [cWW][XIX] 10.77 56.27; 50.03 6.24 -6.7 0.17 9.69
dsRNA 1YY0 16!A:1!B C:G WC [cWW][XIX] 10.66 57.46; 48.3 9.16 0.56 0.07 0.18
dsRNA 1YY0 1!C:16!D G:C WC [cWW][XIX] 10.68 51.11; 57.67 6.57 -3.67 0.38 11.55
dsRNA 1YY0 2!C:15!D C:G WC [cWW][XIX] 10.68 51.1; 56.05 4.95 -5.82 0.07 5.01
dsRNA 1YY0 3!C:14!D A:U WC [cWW][XX] 10.45 55.69; 57.89 2.2 1.24 0.14 5.49
dsRNA 1YY0 4!C:13!D G:C WC [cWW][XIX] 10.36 55.34; 57.81 2.47 -0.42 0.14 4.22
dsRNA 1YY0 5!C:12!D A:U WC [cWW][XX] 10.58 54.53; 54.73 0.2 -2.56 0.05 13.84
dsRNA 1YY0 6!C:11!D C:A Wb [cWW][-] 10.47 61.44; 46.2 15.24 -2.41 0.03 12.19
dsRNA 1YY0 7!C:10!D U:A WC [cWW][XX] 10.71 48.96; 50.91 1.95 -1.12 0.09 9.56
dsRNA 1YY0 8!C:9!D U:A WC [cWW][XX] 10.71 53.32; 55.48 2.16 -9.87 0.07 15.03
dsRNA 1YY0 9!C:8!D A:U WC [cWW][XX] 10.71 55.48; 53.34 2.14 -9.86 0.07 15.03
dsRNA 1YY0 10!C:7!D A:U WC [cWW][XX] 10.71 50.88; 48.92 1.96 -1.13 0.09 9.56
dsRNA 1YY0 11!C:6!D A:C Wb [cWW][-] 10.47 46.23; 61.47 15.23 -2.39 0.03 12.18
dsRNA 1YY0 12!C:5!D U:A WC [cWW][XX] 10.58 54.74; 54.52 0.22 -2.56 0.05 13.84
dsRNA 1YY0 13!C:4!D C:G WC [cWW][XIX] 10.36 57.82; 55.36 2.47 -0.41 0.14 4.22
dsRNA 1YY0 14!C:3!D U:A WC [cWW][XX] 10.45 57.92; 55.71 2.21 1.25 0.14 5.49
dsRNA 1YY0 15!C:2!D G:C WC [cWW][XIX] 10.68 56.04; 51.09 4.95 -5.82 0.07 5.01
dsRNA 1YY0 16!C:1!D C:G WC [cWW][XIX] 10.68 57.7; 51.12 6.58 -3.66 0.38 11.55