Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2R8S BPC Identified: 80 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Group_I_RNA 2R8S 107!R:214!R U:A WC [cWW][XX] 10.03 59.45; 63.62 4.17 -6.66 0.32 10.88
Group_I_RNA 2R8S 108!R:213!R G:C WC [cWW][XIX] 10.62 54.92; 54.56 0.36 -11.11 0.11 16.84
Group_I_RNA 2R8S 109!R:212!R C:G WC [cWW][XIX] 10.49 56.92; 55.88 1.04 -12.04 0.07 14.48
Group_I_RNA 2R8S 109!R:184!R C:A rpS(bs:O2-O2*) [cSS][-] 5.48 105.68; 154.0 48.32 -42.97 0.6 18.69
Group_I_RNA 2R8S 110!R:211!R G:C WC [cWW][XIX] 10.8 50.68; 53.7 3.02 -13.14 0.55 21.94
Group_I_RNA 2R8S 110!R:183!R G:A rpS(sb:O2*-N3) [---][-] 5.75 156.4; 94.83 61.57 -39.12 0.3 26.31
Group_I_RNA 2R8S 111!R:210!R G:A WC [cWW][VIII] 12.45 50.01; 49.05 0.96 -8.93 0.14 17.5
Group_I_RNA 2R8S 112!R:208!R G:C WC [cWW][XIX] 10.73 54.13; 52.43 1.7 -6.19 0.16 3.37
Group_I_RNA 2R8S 113!R:207!R A:A S [tSH][-] 9.29 88.98; 6.04 82.94 -61.64 0.91 18.72
Group_I_RNA 2R8S 114!R:206!R A:A S [tSH][-] 9.37 4.03; 91.19 87.16 -36.62 0.25 14.08
Group_I_RNA 2R8S 116!R:205!R G:U Wb [cWW][XXVIII] 10.33 41.85; 67.97 26.12 1.52 0.14 14.05
Group_I_RNA 2R8S 117!R:204!R G:C WC [cWW][XIX] 10.6 53.48; 55.62 2.14 -5.36 0.14 13.64
Group_I_RNA 2R8S 118!R:203!R G:C WC [cWW][XIX] 10.36 57.75; 57.68 0.06 -9.88 0.11 17.25
Group_I_RNA 2R8S 119!R:202!R G:U Wb [cWW][XXVIII] 10.39 43.99; 67.25 23.26 -12.15 0.38 15.2
Group_I_RNA 2R8S 120!R:201!R U:G Wb [cWW][XXVIII] 10.53 64.82; 43.43 21.39 -10.13 0.11 11.26
Group_I_RNA 2R8S 121!R:200!R C:G WC [cWW][XIX] 10.77 54.68; 51.49 3.19 -2.01 0.05 4.65
Group_I_RNA 2R8S 121!R:123!R C:A pfS(sb:O2*-N3) [---][-] 6.49 129.35; 88.66 40.69 -19.81 1.43 47.38
Group_I_RNA 2R8S 123!R:198!R A:A rH [tWH][V] 11.97 24.15; 15.74 8.41 -170.09 0.17 42.49
Group_I_RNA 2R8S 124!R:201!R C:G fS*_1 [tWS][-] 9.68 14.29; 90.47 76.18 -135.16 1.54 42.44
Group_I_RNA 2R8S 124!R:197!R C:C rH_2 [tWH][-] 10.81 9.79; 42.88 33.09 -144.75 0.42 7.8
Group_I_RNA 2R8S 126!R:202!R G:U rS(ss:O2*-O2*)_1 [---][-] 5.38 103.09; 162.44 59.35 -131.96 2.47 56.44
Group_I_RNA 2R8S 126!R:201!R G:G rS [tSS][IV] 9.24 74.09; 91.13 17.04 -133.56 0.9 50.24
Group_I_RNA 2R8S 126!R:196!R G:A WC [cWW][VIII] 12.61 46.09; 50.01 3.92 -12.56 1.02 31.04
Group_I_RNA 2R8S 127!R:195!R C:G WC [cWW][XIX] 10.5 53.61; 57.96 4.35 -19.15 1.07 33.8
Group_I_RNA 2R8S 128!R:194!R C:G WC [cWW][XIX] 10.48 53.36; 54.0 0.64 -14.31 0.04 18.88
Group_I_RNA 2R8S 129!R:193!R G:C WC [cWW][XIX] 10.78 53.52; 52.36 1.17 -11.68 0.06 15.93
Group_I_RNA 2R8S 131!R:192!R U:A WC [cWW][XX] 10.21 57.14; 58.8 1.67 -12.09 0.07 15.56
Group_I_RNA 2R8S 132!R:191!R C:G WC [cWW][XIX] 10.55 55.63; 53.77 1.85 -7.66 0.06 9.55
Group_I_RNA 2R8S 133!R:190!R A:U WC [cWW][XX] 10.68 54.66; 52.79 1.87 -6.06 0.04 7.82
Group_I_RNA 2R8S 134!R:189!R G:C WC [cWW][XIX] 10.56 55.21; 54.58 0.63 -11.26 0.04 16.1
Group_I_RNA 2R8S 135!R:187!R U:A H_1 [cWH][XXIII] 8.64 55.88; 52.61 3.27 -8.2 0.11 10.84
Group_I_RNA 2R8S 136!R:182!R A:U WC [cWW][XX] 10.65 56.08; 49.87 6.21 -6.06 0.04 16.67
Group_I_RNA 2R8S 137!R:186!R C:A rpS(bs:O2-O2*) [cSS][-] 5.85 105.11; 149.7 44.6 -39.78 1.83 18.02
Group_I_RNA 2R8S 137!R:181!R C:G WC [cWW][XIX] 10.45 57.02; 53.79 3.22 -17.61 0.11 23.67
Group_I_RNA 2R8S 138!R:180!R C:G WC [cWW][XIX] 10.76 52.37; 53.27 0.9 -1.33 0.09 6.18
Group_I_RNA 2R8S 139!R:185!R A:U rS(ss:O2*-O2*)_1 [---][-] 5.65 147.44; 130.74 16.7 106.81 0.91 52.0
Group_I_RNA 2R8S 139!R:164!R A:G S [tSH][XI] 8.88 6.9; 99.12 92.22 -18.68 0.7 25.02
Group_I_RNA 2R8S 140!R:163!R A:G S [tSH][XI] 9.41 9.08; 99.77 90.69 15.25 0.15 12.13
Group_I_RNA 2R8S 141!R:162!R G:U Wb [cWW][XXVIII] 10.35 41.69; 69.29 27.6 -9.76 0.11 18.99
Group_I_RNA 2R8S 142!R:161!R U:A WC [cWW][XX] 10.47 57.14; 54.09 3.05 -10.79 0.05 20.48
Group_I_RNA 2R8S 143!R:160!R C:G WC [cWW][XIX] 10.55 56.67; 54.42 2.25 -8.79 0.01 13.03
Group_I_RNA 2R8S 144!R:159!R U:A WC [cWW][XX] 10.6 54.24; 55.86 1.63 -6.39 0.23 9.49
Group_I_RNA 2R8S 145!R:158!R C:G WC [cWW][XIX] 10.63 51.81; 53.5 1.69 -6.71 0.24 12.71
Group_I_RNA 2R8S 146!R:157!R A:U WC [cWW][XX] 10.32 53.93; 56.46 2.53 -12.11 0.04 18.85
Group_I_RNA 2R8S 147!R:156!R G:U Wb [cWW][XXVIII] 10.49 43.75; 61.58 17.83 -8.02 0.31 19.36
Group_I_RNA 2R8S 148!R:155!R G:U Wb [cWW][XXVIII] 10.3 46.34; 67.2 20.86 -3.94 0.53 11.31
Group_I_RNA 2R8S 149!R:154!R G:C WC [cWW][XIX] 10.44 54.63; 56.4 1.78 6.9 0.12 6.11
Group_I_RNA 2R8S 150!R:153!R G:A S [tSH][XI] 9.14 96.48; 12.3 84.18 -75.68 0.83 13.71
Group_I_RNA 2R8S 150!R:152!R G:A S(sb:O2*-N7) [---][-] 7.65 91.08; 30.84 60.24 -174.24 1.69 24.79
Group_I_RNA 2R8S 151!R:248!R A:A rWb* [tWW][I] 13.5 27.98; 26.76 1.22 137.5 0.35 24.0
Group_I_RNA 2R8S 152!R:250!R A:G fS(sb:O2*-N6) [---][-] 8.9 39.91; 105.2 65.29 164.61 1.79 33.32
Group_I_RNA 2R8S 152!R:224!R A:U rpS(sb:O2*-N3) [cSS][-] 5.55 99.63; 145.97 46.34 -60.59 0.16 29.36
Group_I_RNA 2R8S 153!R:250!R A:G rS [tSS][-] 7.97 70.67; 83.97 13.31 161.02 1.03 23.38
Group_I_RNA 2R8S 153!R:223!R A:C rpS(bs:O2-O2*) [cSS][-] 5.88 156.17; 100.55 55.62 -71.8 0.33 25.67
Group_I_RNA 2R8S 154!R:251!R C:G rS(ss:O2*-O2*) [---][-] 5.83 153.31; 153.33 0.03 -126.16 0.72 23.27
Group_I_RNA 2R8S 164!R:178!R G:A rH_2 [---][-] 12.29 36.45; 31.56 4.9 -35.01 2.53 59.5
Group_I_RNA 2R8S 165!R:175!R C:G WC [cWW][XIX] 10.55 54.17; 53.21 0.96 -6.82 0.06 11.3
Group_I_RNA 2R8S 166!R:174!R C:G WC [cWW][XIX] 10.54 56.44; 55.49 0.95 -6.67 0.07 7.87
Group_I_RNA 2R8S 168!R:188!R U:G rH*_1 [tHW][-] 12.63 21.18; 23.58 2.41 164.7 0.34 9.04
Group_I_RNA 2R8S 171!R:172!R A:A pS [cSH][-] 6.53 145.55; 34.98 110.57 21.99 0.44 29.06
Group_I_RNA 2R8S 181!R:186!R G:A rS [tSS][-] 7.95 87.37; 56.8 30.56 158.52 0.71 40.85
Group_I_RNA 2R8S 184!R:212!R A:G rS [tSS][-] 8.03 60.19; 86.67 26.48 156.33 0.99 32.94
Group_I_RNA 2R8S 197!R:200!R C:G rpS [cSS][-] 5.38 150.42; 107.99 42.43 -30.06 0.99 35.38
Group_I_RNA 2R8S 215!R:258!R G:U Wb [cWW][XXVIII] 10.49 40.32; 67.32 27.01 -4.68 0.75 19.7
Group_I_RNA 2R8S 216!R:257!R C:G WC [cWW][XIX] 10.58 56.54; 54.16 2.39 -9.92 0.03 11.83
Group_I_RNA 2R8S 218!R:254!R A:G S_mo [tSH][XI] 10.28 21.1; 74.39 53.29 137.86 2.08 12.51
Group_I_RNA 2R8S 219!R:254!R A:G S [tSH][XI] 9.26 5.65; 99.48 93.83 -13.4 0.29 8.06
Group_I_RNA 2R8S 220!R:253!R G:U Wb [cWW][XXVIII] 10.36 42.25; 67.9 25.65 -10.03 0.14 15.81
Group_I_RNA 2R8S 221!R:252!R U:A WC [cWW][XX] 10.93 50.66; 56.89 6.22 -11.88 0.41 18.54
Group_I_RNA 2R8S 222!R:251!R C:G WC [cWW][XIX] 10.48 54.32; 51.81 2.5 -15.48 0.09 18.33
Group_I_RNA 2R8S 223!R:250!R C:G WC [cWW][XIX] 10.55 53.35; 50.52 2.83 -11.34 0.12 11.14
Group_I_RNA 2R8S 224!R:248!R U:A rH_1 [tWH][XXIV] 9.42 39.29; 19.69 19.59 132.97 0.49 16.68
Group_I_RNA 2R8S 225!R:226!R A:A pS [cSH][-] 6.49 144.8; 34.33 110.46 26.71 0.75 27.41
Group_I_RNA 2R8S 227!R:247!R G:U Wb [cWW][XXVIII] 10.52 38.35; 73.6 35.25 -7.45 0.02 14.52
Group_I_RNA 2R8S 228!R:246!R U:A WC [cWW][XX] 10.76 52.54; 52.54 0.0 -7.33 0.15 16.89
Group_I_RNA 2R8S 229!R:245!R C:G WC [cWW][XIX] 10.68 52.77; 53.64 0.87 -6.44 0.09 13.4
Group_I_RNA 2R8S 230!R:244!R A:U WC [cWW][XX] 10.71 57.46; 54.13 3.33 -12.26 0.0 16.51
Group_I_RNA 2R8S 231!R:243!R A:U WC [cWW][XX] 11.02 56.15; 53.99 2.16 -16.29 0.26 24.84
Group_I_RNA 2R8S 232!R:242!R C:G WC [cWW][XIX] 10.67 54.51; 54.96 0.45 -13.05 0.4 21.49
Group_I_RNA 2R8S 233!R:241!R A:U WC [cWW][XX] 10.49 63.84; 50.79 13.06 -8.84 0.55 28.51