Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2TRA BPC Identified: 30 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
tRNA 2TRA 1!A:71!A U:A WC [cWW][XX] 10.06 62.06; 56.64 5.41 0.68 0.64 12.93
tRNA 2TRA 2!A:70!A C:G WC [cWW][XIX] 10.74 58.32; 52.52 5.81 -3.78 0.18 7.07
tRNA 2TRA 3!A:69!A C:G WC [cWW][XIX] 10.67 54.38; 60.22 5.84 9.57 0.36 10.68
tRNA 2TRA 4!A:68!A G:C WC [cWW][XIX] 10.46 59.73; 59.13 0.61 -3.39 0.08 5.08
tRNA 2TRA 5!A:67!A U:G Wb [cWW][XXVIII] 10.31 70.07; 45.36 24.71 2.22 0.12 2.36
tRNA 2TRA 6!A:66!A G:C WC [cWW][XIX] 10.67 54.33; 54.87 0.54 -8.47 0.13 10.21
tRNA 2TRA 7!A:65!A A:U WC [cWW][XX] 11.16 52.11; 49.31 2.8 -11.47 0.27 11.49
tRNA 2TRA 8!A:14!A U:A rH_1 [tWH][XXIV] 9.63 31.9; 21.12 10.78 173.94 0.0 7.28
tRNA 2TRA 9!A:23!A A:A rS* [tHH][-] 11.0 9.88; 10.83 0.95 155.55 0.33 8.88
tRNA 2TRA 10!A:45!A G:G pS_2 [---][-] 9.06 40.82; 113.3 72.48 -21.77 0.78 22.88
tRNA 2TRA 10!A:25!A G:U Wb [cWW][XXVIII] 10.49 42.51; 68.69 26.17 1.74 0.07 7.15
tRNA 2TRA 11!A:24!A U:A WC [cWW][XX] 10.52 56.44; 55.7 0.74 -11.32 0.25 13.58
tRNA 2TRA 12!A:23!A U:A WC [cWW][XX] 10.92 52.03; 52.5 0.48 -1.12 0.26 6.58
tRNA 2TRA 13!A:22!A U:G Wb_PSU [---][-] 10.38 80.49; 45.42 35.06 -12.76 0.15 11.39
tRNA 2TRA 14!A:21!A A:A pfS [cSW][-] 9.3 36.82; 117.07 80.26 -14.08 0.17 19.13
tRNA 2TRA 15!A:47!A A:U rWC [tWW][XXI] 11.03 28.09; 43.74 15.65 178.65 0.61 4.11
tRNA 2TRA 22!A:46!A G:A rH*_1 [tHW][-] 11.82 18.45; 23.57 5.12 -170.94 0.25 9.49
tRNA 2TRA 25!A:45!A U:G sWb* [---][-] 13.03 25.09; 63.63 38.54 -18.66 1.1 15.79
tRNA 2TRA 26!A:44!A G:A WC [cWW][VIII] 12.73 44.97; 46.8 1.83 -7.42 0.36 22.8
tRNA 2TRA 27!A:43!A G:C WC [cWW][XIX] 10.91 53.75; 47.85 5.9 -12.95 0.18 11.12
tRNA 2TRA 28!A:42!A G:C WC [cWW][XIX] 10.51 56.14; 54.63 1.5 -7.28 0.03 8.19
tRNA 2TRA 29!A:41!A C:G WC [cWW][XIX] 10.35 59.97; 56.82 3.15 -11.0 0.2 9.76
tRNA 2TRA 30!A:40!A G:U Wb [cWW][XXVIII] 10.63 45.47; 64.65 19.18 -10.59 0.01 14.54
tRNA 2TRA 31!A:39!A C:G WC [cWW][XIX] 10.7 56.96; 50.81 6.15 -8.95 0.04 17.18
tRNA 2TRA 48!A:64!A C:G WC [cWW][XIX] 10.8 53.51; 50.95 2.56 -5.06 0.19 11.36
tRNA 2TRA 49!A:63!A G:C WC [cWW][XIX] 10.5 54.26; 59.43 5.16 1.13 0.05 7.17
tRNA 2TRA 50!A:62!A G:C WC [cWW][XIX] 10.61 53.22; 54.37 1.15 3.11 0.28 5.42
tRNA 2TRA 51!A:61!A G:C WC [cWW][XIX] 10.71 54.85; 52.8 2.05 0.3 0.03 4.78
tRNA 2TRA 52!A:60!A G:C WC [cWW][XIX] 10.79 51.53; 53.25 1.72 5.27 0.21 9.48
tRNA 2TRA 53!A:57!A U:A rH_1 [tWH][XXIV] 9.82 35.89; 15.43 20.46 -160.24 0.48 15.06