Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 2WW9 BPC Identified: 61 Ambiguities: 1
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
rRNA 2WW9 41!D:103!D A:G S [tSH][XI] 9.62 16.27; 93.84 77.57 59.38 1.74 11.52
rRNA 2WW9 42!D:102!D G:U Wb [cWW][XXVIII] 10.35 52.2; 71.85 19.65 -10.4 0.16 21.33
rRNA 2WW9 43!D:101!D A:U WC [cWW][XX] 10.35 59.21; 64.18 4.97 -15.71 0.33 20.41
rRNA 2WW9 44!D:100!D A:U WC [cWW][XX] 11.42 43.74; 47.93 4.2 -20.41 1.27 37.0
rRNA 2WW9 45!D:58!D C:G WC [cWW][XIX] 11.16 48.46; 50.3 1.83 -20.23 0.83 20.52
rRNA 2WW9 46!D:61!D G:A rS [tSS][-] 8.88 85.12; 49.49 35.63 154.15 0.97 48.59
rRNA 2WW9 46!D:57!D G:C WC [cWW][XIX] 11.03 54.52; 48.22 6.3 -30.24 1.5 25.77
rRNA 2WW9 47!D:56!D C:G Wb [---][-] 10.64 60.11; 46.92 13.19 -38.34 0.85 38.22
rRNA 2WW9 49!D:77!D G:A S [tSH][XI] 11.16 80.89; 21.72 59.17 0.9 1.02 34.27
rRNA 2WW9 51!D:75!D G:G H_1 [cWH][VI] 10.63 68.29; 12.33 55.96 -19.14 0.2 67.43
rRNA 2WW9 51!D:53!D G:A fS [tSW][X] 9.35 119.04; 18.98 100.06 31.86 1.27 13.09
rRNA 2WW9 51!D:52!D G:A pS_1 [cSH][-] 6.89 147.78; 35.43 112.36 6.62 0.91 10.67
rRNA 2WW9 57!D:61!D C:A rpS(bs:O2-O2*) [cSS][-] 6.12 101.67; 142.28 40.61 -5.94 0.05 22.82
rRNA 2WW9 58!D:59!D G:A pfS_1 [---][-] 7.65 130.62; 80.85 49.77 4.47 0.9 13.3
rRNA 2WW9 64!D:96!D U:A Wb* [---][-] 10.49 48.21; 67.93 19.72 -14.86 1.09 39.06
rRNA 2WW9 66!D:93!D A:U WC [cWW][XX] 10.48 56.68; 60.94 4.25 -19.28 0.3 23.55
rRNA 2WW9 67!D:92!D U:A WC [cWW][XX] 10.75 57.51; 60.5 3.0 -4.64 0.72 8.97
rRNA 2WW9 68!D:89!D G:A S [tSH][XI] 9.93 104.79; 10.56 94.23 -21.73 0.35 15.24
rRNA 2WW9 72!D:81!D A:U WC [cWW][XX] 10.85 55.68; 56.23 0.55 -6.08 0.33 8.1
rRNA 2WW9 73!D:80!D U:A WC [cWW][XX] 10.99 49.9; 55.81 5.91 -1.33 0.57 15.2
rRNA 2WW9 74!D:79!D U:A WC [cWW][XX] 10.31 55.99; 61.86 5.87 3.06 1.46 38.99
rRNA 2WW9 528!E:532!E U:A rH_1 [tWH][XXIV] 10.18 33.36; 15.47 17.89 -164.12 0.12 8.13
rRNA 2WW9 529!E:554!E G:A pfS(sb:O2*-N6) [---][-] 10.22 170.28; 25.9 144.38 155.29 0.14 9.77
rRNA 2WW9 529!E:533!E G:A S [tSH][XI] 9.56 96.64; 4.44 92.2 -57.03 0.43 22.18
rRNA 2WW9 529!E:531!E G:A S(sb:O2*-N7) [---][-] 7.6 81.71; 33.81 47.91 -164.06 1.51 31.3
rRNA 2WW9 530!E:553!E A:A rS* [tHH][-] 9.81 32.63; 29.56 3.07 -71.55 2.08 54.05
rRNA 2WW9 532!E:555!E A:A rWb* [tWW][I] 13.74 32.3; 24.18 8.13 -154.62 0.24 27.46
rRNA 2WW9 533!E:557!E* A:A rWC [---][-]; rWb*_v [---][-] 13.28 32.15; 32.98 0.83 -128.41 0.64 28.68
rRNA 2WW9 533!E:551!E A:U rpS(sb:O2*-N3) [cSS][-] 5.69 102.08; 139.59 37.51 3.44 1.04 13.61
rRNA 2WW9 534!E:561!E G:C WC [cWW][XIX] 10.94 55.3; 48.85 6.45 12.59 1.42 37.66
rRNA 2WW9 536!E:549!E A:A S [tSH][-] 9.54 7.63; 96.6 88.98 25.35 0.15 14.4
rRNA 2WW9 537!E:548!E C:G Wb* [---][-] 11.04 48.65; 69.52 20.87 -0.8 0.47 9.52
rRNA 2WW9 538!E:547!E U:A WC [cWW][XX] 10.75 56.66; 54.85 1.81 -5.04 0.1 10.23
rRNA 2WW9 539!E:546!E U:G WC [---][-] 10.92 52.56; 50.4 2.17 -3.5 0.28 17.42
rRNA 2WW9 540!E:545!E U:A Wb [---][-] 10.52 64.34; 47.92 16.42 -3.2 0.06 7.95
rRNA 2WW9 541!E:544!E G:A S [tSH][XI] 9.19 94.33; 12.54 81.8 -110.31 0.57 16.68
rRNA 2WW9 541!E:543!E G:A S(sb:O2*-N7) [---][-] 8.11 84.28; 35.72 48.56 -177.87 1.81 27.75
rRNA 2WW9 550!E:558!E G:G rH_2_Mo [---][-] 13.02 38.3; 23.33 14.97 58.79 1.62 40.72
rRNA 2WW9 551!E:555!E U:A rH_1 [tWH][XXIV] 9.85 33.98; 23.64 10.34 167.86 0.86 20.77
rRNA 2WW9 552!E:557!E G:A S [tSH][XI] 9.93 95.45; 4.37 91.07 -23.91 0.95 31.0
rRNA 2WW9 552!E:555!E G:A S(bp:N1-O2P)_1 [---][-] 8.81 64.71; 32.88 31.83 -111.77 2.26 30.61
rRNA 2WW9 558!E:559!E G:U pS* [cHS][-] 6.14 139.03; 56.45 82.58 45.94 0.53 43.05
rRNA 2WW9 559!E:560!E U:A S(sp:O2*-O2P) [---][-] 9.2 170.27; 97.78 72.49 -19.41 1.07 62.26
rRNA 2WW9 560!E:561!E A:C S*(ps:O2P-O2*) [---][-] 8.53 133.89; 76.4 57.49 58.91 2.43 62.82
rRNA 2WW9 1654!F:1678!F C:G WC [cWW][XIX] 11.24 42.14; 52.91 10.77 -15.64 0.93 26.02
rRNA 2WW9 1655!F:1677!F C:G WC [cWW][XIX] 10.88 54.95; 51.11 3.85 -18.64 0.18 23.44
rRNA 2WW9 1656!F:1676!F A:U WC [cWW][XX] 10.76 55.62; 55.17 0.45 -10.51 0.16 18.17
rRNA 2WW9 1657!F:1675!F C:G WC [cWW][XIX] 10.91 54.46; 53.91 0.56 -13.1 0.55 24.96
rRNA 2WW9 1658!F:1674!F G:C WC [cWW][XIX] 11.03 51.58; 51.02 0.56 -15.13 0.51 32.85
rRNA 2WW9 1659!F:1673!F U:A WC [cWW][XX] 11.28 52.39; 42.34 10.05 -24.3 0.46 27.57
rRNA 2WW9 1660!F:1671!F C:G rH_1 [tWH][-] 11.22 23.64; 7.83 15.81 -159.12 0.21 16.62
rRNA 2WW9 1662!F:1673!F A:A pfS [cSW][-] 8.81 44.57; 123.05 78.48 -23.27 0.02 46.96
rRNA 2WW9 1663!F:1671!F C:G WC [cWW][XIX] 10.81 55.21; 51.11 4.09 -25.2 0.74 38.18
rRNA 2WW9 1664!F:1670!F A:U WC [cWW][XX] 10.53 50.72; 61.75 11.03 -4.54 1.0 26.78
rRNA 2WW9 912!G:929!G G:C WC [cWW][XIX] 11.14 49.86; 51.28 1.42 0.19 0.12 5.75
rRNA 2WW9 913!G:928!G C:G WC [cWW][XIX] 11.12 51.07; 48.37 2.7 -3.14 0.22 10.75
rRNA 2WW9 914!G:927!G C:G WC [cWW][XIX] 11.01 52.65; 52.26 0.4 -1.11 0.17 9.35
rRNA 2WW9 915!G:926!G A:U WC [cWW][XX] 11.01 53.22; 52.38 0.84 -0.92 0.07 9.87
rRNA 2WW9 916!G:925!G G:C WC [cWW][XIX] 11.1 49.0; 52.2 3.2 -4.14 0.11 11.3
rRNA 2WW9 917!G:924!G C:G WC [cWW][XIX] 11.06 50.12; 52.85 2.73 -1.44 0.46 12.52
rRNA 2WW9 918!G:923!G A:U WC [cWW][XX] 10.69 59.33; 51.8 7.53 3.69 1.11 3.78