Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3F2W BPC Identified: 54 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3F2W 1!X:112!X G:C WC_Mo [cWW][XIX] 10.5 66.6; 55.94 10.66 -6.8 0.98 16.18
Riboswitch 3F2W 2!X:111!X G:U Wb [cWW][XXVIII] 10.32 46.58; 67.53 20.95 -15.63 0.09 20.97
Riboswitch 3F2W 3!X:110!X A:U Wb [---][-] 10.3 56.9; 69.45 12.56 -22.48 0.36 28.4
Riboswitch 3F2W 4!X:109!X U:A WC [cWW][XX] 10.72 55.08; 50.47 4.62 -13.17 0.28 15.03
Riboswitch 3F2W 5!X:108!X C:G WC_Mo [cWW][XIX] 10.85 57.38; 62.09 4.71 -16.2 0.02 20.45
Riboswitch 3F2W 6!X:107!X U:A WC [cWW][XX] 10.92 56.92; 48.51 8.41 -14.47 0.14 14.83
Riboswitch 3F2W 7!X:106!X U:A WC [cWW][XX] 11.15 42.47; 49.44 6.97 18.4 0.04 29.25
Riboswitch 3F2W 8!X:105!X C:G WC [cWW][XIX] 10.72 51.65; 55.89 4.24 -14.57 0.58 12.95
Riboswitch 3F2W 9!X:104!X G:A S [tSH][XI] 9.89 91.0; 4.24 86.76 -47.07 1.9 43.38
Riboswitch 3F2W 11!X:31!X G:C rpS [cSS][-] 5.08 99.62; 159.59 59.97 -39.88 0.59 28.38
Riboswitch 3F2W 12!X:93!X G:G rS [tSS][IV] 8.41 59.54; 84.88 25.33 160.46 0.35 43.55
Riboswitch 3F2W 13!X:28!X C:G pfS [cSW][-] 9.3 98.91; 55.15 43.76 -11.95 0.0 15.32
Riboswitch 3F2W 14!X:28!X A:G S [tSH][XI] 9.76 8.12; 97.98 89.87 -29.37 0.9 19.08
Riboswitch 3F2W 15!X:27!X G:C WC [cWW][XIX] 10.65 57.42; 55.91 1.51 -3.79 0.21 8.36
Riboswitch 3F2W 16!X:26!X G:C WC [cWW][XIX] 10.64 58.33; 61.4 3.07 -7.98 0.37 16.9
Riboswitch 3F2W 17!X:25!X G:C WC [cWW][XIX] 10.73 58.84; 49.16 9.68 6.79 0.93 25.85
Riboswitch 3F2W 18!X:22!X U:A rH_1 [tWH][XXIV] 10.14 37.57; 17.17 20.4 -177.15 0.86 19.47
Riboswitch 3F2W 19!X:90!X G:A S [tSH][XI] 9.01 100.78; 8.25 92.54 -42.17 0.58 29.41
Riboswitch 3F2W 19!X:22!X G:A S(bp:N1-O2P)_1 [---][-] 8.35 66.16; 33.91 32.24 -101.14 2.48 28.49
Riboswitch 3F2W 19!X:21!X G:A S(sb:O2*-N7) [---][-] 7.02 81.83; 34.92 46.91 -157.68 1.57 34.08
Riboswitch 3F2W 29!X:94!X A:U WC [cWW][XX] 10.61 54.68; 52.78 1.9 -7.63 0.39 14.39
Riboswitch 3F2W 30!X:93!X C:G WC [cWW][XIX] 10.69 56.65; 52.86 3.79 -23.89 0.3 27.97
Riboswitch 3F2W 31!X:84!X C:G WC [cWW][XIX] 10.67 59.49; 50.5 8.99 -22.04 0.16 27.3
Riboswitch 3F2W 32!X:83!X G:C WC [cWW][XIX] 10.72 52.41; 54.67 2.26 -14.11 0.29 19.18
Riboswitch 3F2W 33!X:104!X G:A rS [tSS][-] 8.23 85.71; 62.68 23.04 172.6 0.14 10.7
Riboswitch 3F2W 33!X:46!X G:C WC [cWW][XIX] 10.67 52.71; 55.7 2.99 -6.33 0.12 9.36
Riboswitch 3F2W 34!X:105!X U:G rS(ss:O2*-O2*)_2 [---][-] 5.43 169.58; 144.73 24.85 -125.35 1.03 31.98
Riboswitch 3F2W 34!X:45!X U:A WC [cWW][XX] 10.15 57.84; 57.78 0.06 -6.85 0.2 18.71
Riboswitch 3F2W 35!X:44!X G:C WC [cWW][XIX] 10.68 58.47; 49.03 9.45 -5.21 0.27 20.59
Riboswitch 3F2W 36!X:43!X G:C WC [cWW][XIX] 10.46 58.09; 50.49 7.6 -11.69 1.05 31.49
Riboswitch 3F2W 37!X:40!X U:A rH_1 [tWH][XXIV] 9.37 33.82; 19.7 14.12 175.88 0.32 10.83
Riboswitch 3F2W 38!X:70!X A:G S [tSH][XI] 9.87 9.74; 101.96 92.23 -3.2 0.98 34.59
Riboswitch 3F2W 41!X:82!X G:C WC [cWW][XIX] 10.72 54.1; 52.68 1.42 -16.06 0.07 21.95
Riboswitch 3F2W 41!X:63!X G:A rS [tSS][-] 8.46 85.55; 54.85 30.7 157.43 0.87 39.37
Riboswitch 3F2W 42!X:81!X U:A WC [cWW][XX] 10.73 51.38; 50.85 0.53 -0.88 0.14 16.15
Riboswitch 3F2W 46!X:104!X C:A rpS(bs:O2-O2*) [cSS][-] 5.97 103.43; 152.29 48.87 -55.19 0.73 18.29
Riboswitch 3F2W 49!X:60!X A:U WC [cWW][XX] 10.9 47.1; 58.63 11.53 -13.76 0.15 16.8
Riboswitch 3F2W 50!X:59!X A:U WC [cWW][XX] 10.86 55.42; 51.8 3.62 -13.75 0.14 21.68
Riboswitch 3F2W 51!X:58!X G:C WC [cWW][XIX] 10.74 55.81; 55.55 0.27 -20.05 0.03 24.82
Riboswitch 3F2W 52!X:57!X U:G Wb [cWW][XXVIII] 10.93 66.63; 42.24 24.39 -15.46 0.3 19.83
Riboswitch 3F2W 62!X:83!X G:C rpS [cSS][-] 5.56 98.54; 152.21 53.67 -47.6 0.03 30.06
Riboswitch 3F2W 63!X:82!X A:C rpS(bs:O2-O2*) [cSS][-] 5.65 147.07; 103.64 43.42 -36.96 1.44 17.49
Riboswitch 3F2W 64!X:80!X U:A WC [cWW][XX] 10.17 56.73; 59.35 2.62 -0.27 0.06 2.4
Riboswitch 3F2W 65!X:79!X U:A WC [cWW][XX] 10.58 55.41; 59.14 3.73 -8.68 0.13 13.18
Riboswitch 3F2W 66!X:78!X U:A WC [cWW][XX] 10.62 53.93; 52.16 1.76 -3.59 0.4 9.96
Riboswitch 3F2W 67!X:77!X G:C WC [cWW][XIX] 10.37 53.97; 55.58 1.6 -9.94 0.51 20.3
Riboswitch 3F2W 68!X:76!X G:C WC [cWW][XIX] 10.88 59.66; 45.56 14.1 -8.39 0.18 15.01
Riboswitch 3F2W 69!X:73!X U:A rH_1 [tWH][XXIV] 10.63 39.49; 10.84 28.66 -162.15 0.11 13.58
Riboswitch 3F2W 70!X:72!X G:A S(sb:O2*-N7) [---][-] 7.29 85.93; 35.09 50.84 -159.76 1.12 34.46
Riboswitch 3F2W 85!X:98!X A:G WC [cWW][VIII] 12.7 50.03; 48.15 1.89 -11.54 0.15 16.35
Riboswitch 3F2W 86!X:97!X C:G WC [cWW][XIX] 10.43 56.29; 55.57 0.72 -18.16 1.09 37.58
Riboswitch 3F2W 87!X:96!X A:U WC [cWW][XX] 10.29 57.52; 56.65 0.87 -19.33 0.46 23.22
Riboswitch 3F2W 88!X:95!X G:C WC [cWW][XIX] 10.65 59.45; 48.28 11.18 -18.45 0.3 29.69
Riboswitch 3F2W 89!X:92!X U:A rH_1 [tWH][XXIV] 9.79 32.65; 20.19 12.45 -149.02 0.15 16.22