Identified Basepairs and Their Conformations and Conformational Parameters

PDB Id: 3G4M BPC Identified: 35 Ambiguities: 0
RNA PDB Position bp bpC; LG [LW][Sanger] dCC <X ; <Y |<X - <Y| Torsion Z-Diff Buckle
Riboswitch 3G4M 16!A:80!A G:C WC [cWW][XIX] 10.75 54.65; 43.21 11.45 -20.96 0.27 22.1
Riboswitch 3G4M 17!A:79!A A:U WC [cWW][XX] 10.58 55.34; 53.59 1.75 -13.53 0.08 15.26
Riboswitch 3G4M 18!A:78!A C:G WC [cWW][XIX] 10.82 47.2; 54.85 7.65 -12.09 0.29 19.5
Riboswitch 3G4M 19!A:77!A A:U WC [cWW][XX] 10.2 57.46; 59.56 2.1 -9.22 0.22 14.06
Riboswitch 3G4M 20!A:76!A U:A WC [cWW][XX] 10.4 53.82; 56.99 3.17 -10.15 0.17 17.38
Riboswitch 3G4M 21!A:75!A A:U WC [cWW][XX] 10.56 53.83; 55.53 1.7 -5.89 0.17 11.84
Riboswitch 3G4M 22!A:52!A U:A WC [cWW][XX] 10.45 58.1; 55.95 2.16 2.67 0.67 14.26
Riboswitch 3G4M 23!A:46!A A:G fS [tSW][X] 9.77 5.92; 116.2 110.27 158.4 0.52 4.36
Riboswitch 3G4M 25!A:45!A U:A WC [cWW][XX] 10.35 55.08; 56.3 1.22 -9.02 0.22 12.24
Riboswitch 3G4M 26!A:44!A C:A WC [---][-] 11.06 47.11; 55.81 8.7 -10.7 0.08 13.93
Riboswitch 3G4M 27!A:43!A G:C WC [cWW][XIX] 10.32 57.13; 58.35 1.22 -9.67 0.04 12.77
Riboswitch 3G4M 28!A:42!A C:G WC [cWW][XIX] 10.55 55.69; 57.02 1.33 -8.39 0.31 17.63
Riboswitch 3G4M 29!A:41!A G:C WC [cWW][XIX] 10.61 52.69; 56.42 3.72 -1.78 0.32 9.06
Riboswitch 3G4M 30!A:40!A U:A WC [cWW][XX] 10.29 57.13; 57.55 0.41 -1.3 0.2 1.11
Riboswitch 3G4M 31!A:39!A G:C WC [cWW][XIX] 10.6 56.34; 50.23 6.11 -2.23 0.08 8.48
Riboswitch 3G4M 33!A:66!A A:A rH [tWH][V] 12.25 21.35; 20.38 0.97 139.56 0.39 12.53
Riboswitch 3G4M 33!A:37!A A:G pfS(sb:O2*-N3) [---][-] 5.3 100.96; 156.8 55.84 -5.21 1.49 12.58
Riboswitch 3G4M 34!A:65!A U:A rH_1 [tWH][XXIV] 9.51 32.94; 18.14 14.8 177.06 0.17 2.75
Riboswitch 3G4M 34!A:37!A U:G rpS [cSS][-] 4.59 121.64; 97.81 23.83 126.37 1.7 26.29
Riboswitch 3G4M 35!A:64!A A:A rH [tWH][V] 12.38 24.0; 21.28 2.72 179.57 0.43 6.01
Riboswitch 3G4M 37!A:61!A G:C WC [cWW][XIX] 10.86 49.21; 53.49 4.28 -15.19 0.43 12.93
Riboswitch 3G4M 38!A:66!A G:A fS [tSW][X] 9.2 118.74; 24.09 94.65 -88.08 0.37 35.35
Riboswitch 3G4M 38!A:60!A G:C WC [cWW][XIX] 10.72 56.33; 54.86 1.48 -5.26 0.83 20.95
Riboswitch 3G4M 46!A:53!A G:C WC [cWW][XIX] 10.9 52.07; 56.27 4.2 5.44 0.73 18.65
Riboswitch 3G4M 49!A:76!A U:A pfS* [cWS][-] 6.23 64.54; 129.63 65.09 34.75 1.51 31.02
Riboswitch 3G4M 50!A:75!A C:U pfS [cSW][-] 7.54 38.72; 134.62 95.9 -18.57 0.27 14.14
Riboswitch 3G4M 54!A:72!A C:G WC [cWW][XIX] 10.43 54.44; 56.95 2.52 -7.91 0.41 15.43
Riboswitch 3G4M 55!A:71!A G:C WC [cWW][XIX] 10.54 56.26; 56.05 0.21 -13.75 0.43 13.62
Riboswitch 3G4M 55!A:70!A G:C WC_mo [cWW][XIX] 12.8 39.0; 35.37 3.63 9.81 2.43 29.85
Riboswitch 3G4M 56!A:70!A G:C WC [cWW][XIX] 10.66 50.65; 52.79 2.15 -11.04 0.04 18.59
Riboswitch 3G4M 57!A:69!A G:U Wb [cWW][XXVIII] 10.41 39.52; 67.54 28.02 -11.4 0.05 15.67
Riboswitch 3G4M 58!A:68!A C:G WC [cWW][XIX] 10.59 52.37; 54.02 1.65 -11.8 0.07 16.97
Riboswitch 3G4M 59!A:67!A A:U WC [cWW][XX] 10.84 54.57; 50.26 4.31 -11.02 0.12 16.19
Riboswitch 3G4M 61!A:65!A C:A pfS [cSW][-] 9.13 129.62; 42.52 87.1 12.88 0.75 17.25
Riboswitch 3G4M 62!A:63!A G:U pS* [cHS][-] 6.8 145.55; 48.71 96.84 -0.51 0.54 2.44