Last modified on 24 August 2012.

Literature Reference:

Feagin J.E., Harrell M.I., Lee J.C., Coe K.J., Sands B.H., Cannone J.J., Tami G., Schnare M.N., and Gutell R.R. (2012)
The Fragmented Mitochondrial Ribosomal RNAs of Plasmodium falciparum.
PLoS One, 7(6):e38320.

Manuscript Figures and Tables:

Tables are presented in a single HTML document; figures appear in both PDF (Adobe Portable Document Format) and TIF (Tagged Image File) formats.
Figure/Table Title Panel
Table 1. P. falciparum small mt RNA mapping and identification. HTML
Table 2. Relative sizes of mtRNAs. HTML
Figure 1. Schematic map of the P. falciparum mt genome. PDF | TIF
Figure 2. SSU rRNA secondary structure. PDF | TIF
Figure 3. LSU rRNA secondary structure, 5' half. PDF | TIF
Figure 4. LSU rRNA secondary structure, 3' half. PDF | TIF
Figure 5. rRNA tertiary structure. PDF | TIF

Supplemental Information:

File formats: PDF, Adobe Portable Document Format; TIF, Tagged Image File format.
Figure/Table Title Panel
Table S1. Mt genomes from Plasmodium species and related apicomplexans. PDF
Table S2. Intergenic size variation among hemosporidian mt genomes. PDF
Table S3. Similarity of individual mt genes from Plasmodium species relative to P. falciparum. PDF
Table S4. Oligonucleotides used in this study. PDF
Table S5. P. falciparum mt rRNA 3' end sequences. PDF
Table S6. Abutted P. falciparum mt gene sets. PDF
Table S7. Fragment placement in rRNA alignments for covariation analysis. PDF
Table S8. Prospective covariations found in fragmented apicomplexan mt rRNA genes. PDF
Table S9. Correspondence of P. falciparum and C. elegans mt rRNAs. PDF
Figure S1. RNA10 variation among Plasmodium species. PDF | TIF
Figure S2. Identification of P. falciparum mitochondrial GTPase center rRNAs. PDF | TIF
Figure S3. Small mitochondrial RNAs of P. falciparum. PDF | TIF
Figure S4. LSUF analysis. PDF | TIF
Figure S5. Mapping P. falciparum mt RNAs. PDF | TIF
Figure S6. Proposed secondary structure for T. parva mt SSU rRNA. PDF | TIF
Figure S7. Proposed secondary structure for T. parva mt LSU rRNA (5' half). PDF | TIF
Figure S8. Proposed secondary structure for T. parva mt LSU rRNA (3' half). PDF | TIF
Figure S9. Location of type 1 and 2 covariations in SSU rRNA. PDF | TIF
Figure S10. Location of type 1 and 2 covariations in LSU rRNA (5' half). PDF | TIF
Figure S11. Location of type 1 and 2 covariations in LSU rRNA (3' half). PDF | TIF
Figure S12. SSU rRNA tertiary structure. PDF | TIF
Figure S13. LSU rRNA tertiary structure. PDF | TIF
Figure S14. P. falciparum mt SSU rRNAs color-coded to tertiary structure. PDF | TIF
Figure S15. P. falciparum mt LSU rRNAs (5' half) color-coded to tertiary structure. PDF | TIF
Figure S16. P. falciparum mt LSU rRNAs (3' half) color-coded to tertiary structure. PDF | TIF