#- #- editor #- Fri May 11 12:33:53 2001 #- #- #- Reference sequence: E.coli #- Attributes: #= E.coli nobase in -out vis prt rna lin 5>3 func ref #= AQUIFICALE nobase -in out vis bold rna lin 5>3 func #= A.aeolicus nobase in out vis prt rna lin 5>3 func #= A.pyrophil nobase in out vis prt rna lin 5>3 func #= THERMOTOGA nobase -in out vis bold rna lin 5>3 func #= F.islandic nobase in out vis prt rna lin 5>3 func #= T.maritima nobase in out vis prt rna lin 5>3 func #= RADIO-RESI nobase -in out vis bold rna lin 5>3 func #= T.thermoph nobase in out vis prt rna lin 5>3 func #= FLE-CYT-BA nobase -in out vis bold rna lin 5>3 func #= M.odoratus nobase in out vis prt rna lin 5>3 func #= F.flexilis nobase in out vis prt rna lin 5>3 func #= GREENSULFU nobase -in out vis bold rna lin 5>3 func #= C.limicola nobase in out vis prt rna lin 5>3 func #= PLANCTOMYC nobase -in out vis bold rna lin 5>3 func #= C.pneumo.1 nobase in out vis prt rna lin 5>3 func #= C.pneumo.2 nobase in out vis prt rna lin 5>3 func #= C.pneumo.3 nobase in out vis prt rna lin 5>3 func #= C.pneumo.4 nobase in out vis prt rna lin 5>3 func #= C.pneumo.5 nobase in out vis prt rna lin 5>3 func #= C.pneumo.6 nobase in out vis prt rna lin 5>3 func #= C.trach.01 nobase in out vis prt rna lin 5>3 func #= C.trach.02 nobase in out vis prt rna lin 5>3 func #= C.trach.03 nobase in out vis prt rna lin 5>3 func #= C.trach.04 nobase in out vis prt rna lin 5>3 func #= C.trach.05 nobase in out vis prt rna lin 5>3 func #= C.trach.06 nobase in out vis prt rna lin 5>3 func #= C.trach.07 nobase in out vis prt rna lin 5>3 func #= C.trach.08 nobase in out vis prt rna lin 5>3 func #= C.trach.09 nobase in out vis prt rna lin 5>3 func #= C.trach.10 nobase in out vis prt rna lin 5>3 func #= C.trach.11 nobase in out vis prt rna lin 5>3 func #= C.trach.12 nobase in out vis prt rna lin 5>3 func #= C.trach.13 nobase in out vis prt rna lin 5>3 func #= C.trach.14 nobase in out vis prt rna lin 5>3 func #= Chlamyd.sp nobase in out vis prt rna lin 5>3 func #= C.pecoru.1 nobase in out vis prt rna lin 5>3 func #= C.pecoru.2 nobase in out vis prt rna lin 5>3 func #= C.pecoru.3 nobase in out vis prt rna lin 5>3 func #= C.pecoru.4 nobase in out vis prt rna lin 5>3 func #= C.pecoru.5 nobase in out vis prt rna lin 5>3 func #= C.pecoru.6 nobase in out vis prt rna lin 5>3 func #= C.psitt.01 nobase in out vis prt rna lin 5>3 func #= C.psitt.02 nobase in out vis prt rna lin 5>3 func #= C.psitt.03 nobase in out vis prt rna lin 5>3 func #= C.psitt.04 nobase in out vis prt rna lin 5>3 func #= C.psitt.05 nobase in out vis prt rna lin 5>3 func #= C.psitt.06 nobase in out vis prt rna lin 5>3 func #= C.psitt.07 nobase in out vis prt rna lin 5>3 func #= C.psitt.08 nobase in out vis prt rna lin 5>3 func #= C.psitt.09 nobase in out vis prt rna lin 5>3 func #= C.psitt.10 nobase in out vis prt rna lin 5>3 func #= C.psitt.11 nobase in out vis prt rna lin 5>3 func #= C.psitt.12 nobase in out vis prt rna lin 5>3 func #= C.psitt.14 nobase in out vis prt rna lin 5>3 func #= C.psitt.15 nobase in out vis prt rna lin 5>3 func #= C.psitt.16 nobase in out vis prt rna lin 5>3 func #= C.psitt.17 nobase in out vis prt rna lin 5>3 func #= C.psitt.18 nobase in out vis prt rna lin 5>3 func #= Simkan.ZV1 nobase in out vis prt rna lin 5>3 func #= Pir.marina nobase in out vis prt rna lin 5>3 func #= CYANOBACTE nobase -in out vis bold rna lin 5>3 func #= Syn.PCC.1 nobase in out vis prt rna lin 5>3 func #= Syn.PCC.2 nobase in out vis prt rna lin 5>3 func #= Synec.6803 nobase in out vis prt rna lin 5>3 func #= F.succinog nobase in out vis prt rna lin 5>3 func #= SPIROCHETE nobase -in out vis bold rna lin 5>3 func #= Bra.hyodys nobase in out vis prt rna lin 5>3 func #= Bra.inno.1 nobase in out vis prt rna lin 5>3 func #= Bra.inno.2 nobase in out vis prt rna lin 5>3 func #= Bra.inno.3 nobase in out vis prt rna lin 5>3 func #= Bra.pilosi nobase in out vis prt rna lin 5>3 func #= T.pallid.A nobase in out vis prt rna lin 5>3 func #= T.pallid.B nobase in out vis prt rna lin 5>3 func #= B.burgdo.1 nobase in out vis prt rna lin 5>3 func #= B.burgdo.2 nobase in out vis prt rna lin 5>3 func #= B.burgdo.3 nobase in out vis prt rna lin 5>3 func #= B.burgdo.4 nobase in out vis prt rna lin 5>3 func #= B.burgdo.5 nobase in out vis prt rna lin 5>3 func #= L.santaros nobase in out vis prt rna lin 5>3 func #= L.borgpete nobase in out vis prt rna lin 5>3 func #= L.interrog nobase in out vis prt rna lin 5>3 func #= PURPLE.ALP nobase -in out vis bold rna lin 5>3 func #= R.rubrum nobase in out vis prt rna lin 5>3 func #= A.xylinus nobase in out vis prt rna lin 5>3 func #= A.intermed nobase in out vis prt rna lin 5>3 func #= A.europa.1 nobase in out vis prt rna lin 5>3 func #= A.europa.2 nobase in out vis prt rna lin 5>3 func #= R.ricketts nobase in out vis prt rna lin 5>3 func #= R.bellii nobase in out vis prt rna lin 5>3 func #= R.prowazek nobase in out vis prt rna lin 5>3 func #= Wol.pipien nobase in out vis prt rna lin 5>3 func #= P.denitrif nobase in out vis prt rna lin 5>3 func #= R.capsulat nobase in out vis prt rna lin 5>3 func #= R.sphaer.A nobase in out vis prt rna lin 5>3 func #= R.sphaer.B nobase in out vis prt rna lin 5>3 func #= R.sphaer.C nobase in out vis prt rna lin 5>3 func #= Z.mobilis nobase in out vis prt rna lin 5>3 func #= B.diminuta nobase in out vis prt rna lin 5>3 func #= R.palustri nobase in out vis prt rna lin 5>3 func #= B.lupini nobase in out vis prt rna lin 5>3 func #= B.japoni.1 nobase in out vis prt rna lin 5>3 func #= B.japoni.2 nobase in out vis prt rna lin 5>3 func #= A.vitis nobase in out vis prt rna lin 5>3 func #= B.bacillif nobase in out vis prt rna lin 5>3 func #= Z.ramigera nobase in out vis prt rna lin 5>3 func #= PURPLE.BET nobase -in out vis bold rna lin 5>3 func #= N.meningit nobase in out vis prt rna lin 5>3 func #= N.gonorrho nobase in out vis prt rna lin 5>3 func #= R.picketti nobase in out vis prt rna lin 5>3 func #= R.solana.1 nobase in out vis prt rna lin 5>3 func #= R.solana.2 nobase in out vis prt rna lin 5>3 func #= R.solana.3 nobase in out vis prt rna lin 5>3 func #= R.solana.4 nobase in out vis prt rna lin 5>3 func #= R.solana.5 nobase in out vis prt rna lin 5>3 func #= B.mallei nobase in out vis prt rna lin 5>3 func #= B.pseudoma nobase in out vis prt rna lin 5>3 func #= B.gladioli nobase in out vis prt rna lin 5>3 func #= A.faecalis nobase in out vis prt rna lin 5>3 func #= B.avium nobase in out vis prt rna lin 5>3 func #= B.bronchis nobase in out vis prt rna lin 5>3 func #= B.parapert nobase in out vis prt rna lin 5>3 func #= B.pertussi nobase in out vis prt rna lin 5>3 func #= T.ferrooxi nobase in out vis prt rna lin 5>3 func #= X.fragaria nobase in out vis prt rna lin 5>3 func #= T.cuprin.1 nobase in out vis prt rna lin 5>3 func #= T.cuprin.2 nobase in out vis prt rna lin 5>3 func #= M.bispor.1 nobase in out vis prt rna lin 5>3 func #= M.bispor.2 nobase in out vis prt rna lin 5>3 func #= PURPLE.GAM nobase -in out vis bold rna lin 5>3 func #= L.mucor nobase in out vis prt rna lin 5>3 func #= C.burnetii nobase in out vis prt rna lin 5>3 func #= A.calcoace nobase in out vis prt rna lin 5>3 func #= P.stutze.1 nobase in out vis prt rna lin 5>3 func #= P.stutze.2 nobase in out vis prt rna lin 5>3 func #= P.aerugino nobase in out vis prt rna lin 5>3 func #= P.perfecto nobase in out vis prt rna lin 5>3 func #= P.cepacia nobase in out vis prt rna lin 5>3 func #= V.vulnif.1 nobase in out vis prt rna lin 5>3 func #= V.vulnif.2 nobase in out vis prt rna lin 5>3 func #= V.vulnif.3 nobase in out vis prt rna lin 5>3 func #= V.choler.1 nobase in out vis prt rna lin 5>3 func #= V.choler.2 nobase in out vis prt rna lin 5>3 func #= R.amylophi nobase in out vis prt rna lin 5>3 func #= A.hydrop.1 nobase in out vis prt rna lin 5>3 func #= A.hydrop.2 nobase in out vis prt rna lin 5>3 func #= S.typhi nobase in out vis prt rna lin 5>3 func #= S.enteri.1 nobase in out vis prt rna lin 5>3 func #= S.enteri.2 nobase in out vis prt rna lin 5>3 func #= S.enteri.3 nobase in out vis prt rna lin 5>3 func #= S.enteri.4 nobase in out vis prt rna lin 5>3 func #= S.enteri.5 nobase in out vis prt rna lin 5>3 func #= S.enteri.6 nobase in out vis prt rna lin 5>3 func #= S.enteri.7 nobase in out vis prt rna lin 5>3 func #= S.enteri.8 nobase in out vis prt rna lin 5>3 func #= S.bongori nobase in out vis prt rna lin 5>3 func #= E.coli.A1 nobase in out vis prt rna lin 5>3 func #= E.coli.A2 nobase in out vis prt rna lin 5>3 func #= E.coli.B nobase in out vis prt rna lin 5>3 func #= E.coli.C nobase in out vis prt rna lin 5>3 func #= E.coli.E nobase in out vis prt rna lin 5>3 func #= E.coli.H nobase in out vis prt rna lin 5>3 func #= C.freundii nobase in out vis prt rna lin 5>3 func #= K.pneumoni nobase in out vis prt rna lin 5>3 func #= Y.enteroco nobase in out vis prt rna lin 5>3 func #= P.shigello nobase in out vis prt rna lin 5>3 func #= H.influe.F nobase in out vis prt rna lin 5>3 func #= H.influe.E nobase in out vis prt rna lin 5>3 func #= H.influe.D nobase in out vis prt rna lin 5>3 func #= H.influe.C nobase in out vis prt rna lin 5>3 func #= H.influe.B nobase in out vis prt rna lin 5>3 func #= H.influe.A nobase in out vis prt rna lin 5>3 func #= A.actino.1 nobase in out vis prt rna lin 5>3 func #= A.actino.2 nobase in out vis prt rna lin 5>3 func #= A.actino.3 nobase in out vis prt rna lin 5>3 func #= A.actino.4 nobase in out vis prt rna lin 5>3 func #= A.actino.5 nobase in out vis prt rna lin 5>3 func #= A.actino.6 nobase in out vis prt rna lin 5>3 func #= A.actino.7 nobase in out vis prt rna lin 5>3 func #= A.actino.8 nobase in out vis prt rna lin 5>3 func #= A.actino.9 nobase in out vis prt rna lin 5>3 func #= PURPLE.DEL nobase -in out vis bold rna lin 5>3 func #= N.exedens nobase in out vis prt rna lin 5>3 func #= S.aurantia nobase in out vis prt rna lin 5>3 func #= H.pylori.1 nobase in out vis prt rna lin 5>3 func #= H.pylori.2 nobase in out vis prt rna lin 5>3 func #= H.pylori.3 nobase in out vis prt rna lin 5>3 func #= PURPLE.EPS nobase -in out vis bold rna lin 5>3 func #= W.succinog nobase in out vis prt rna lin 5>3 func #= A.cryaerop nobase in out vis prt rna lin 5>3 func #= A.skirrowi nobase in out vis prt rna lin 5>3 func #= A.butzleri nobase in out vis prt rna lin 5>3 func #= A.nitrofig nobase in out vis prt rna lin 5>3 func #= Cam.sp. nobase in out vis prt rna lin 5>3 func #= Cam.hyoile nobase in out vis prt rna lin 5>3 func #= C.jejuni.1 nobase in out vis prt rna lin 5>3 func #= C.jejuni.2 nobase in out vis prt rna lin 5>3 func #= C.jejuni.3 nobase in out vis prt rna lin 5>3 func #= C.jejuni.4 nobase in out vis prt rna lin 5>3 func #= C.jejuni.5 nobase in out vis prt rna lin 5>3 func #= C.jejuni.6 nobase in out vis prt rna lin 5>3 func #= C.lari.1 nobase in out vis prt rna lin 5>3 func #= C.lari.2 nobase in out vis prt rna lin 5>3 func #= C.upsali.1 nobase in out vis prt rna lin 5>3 func #= C.upsali.2 nobase in out vis prt rna lin 5>3 func #= C.coli.1 nobase in out vis prt rna lin 5>3 func #= C.coli.2 nobase in out vis prt rna lin 5>3 func #= C.coli.3 nobase in out vis prt rna lin 5>3 func #= C.hyointes nobase in out vis prt rna lin 5>3 func #= C.fetus.1 nobase in out vis prt rna lin 5>3 func #= C.fetus.2 nobase in out vis prt rna lin 5>3 func #= C.mucosa.1 nobase in out vis prt rna lin 5>3 func #= C.mucosa.2 nobase in out vis prt rna lin 5>3 func #= C.concisus nobase in out vis prt rna lin 5>3 func #= C.s.bubulu nobase in out vis prt rna lin 5>3 func #= C.s.fecali nobase in out vis prt rna lin 5>3 func #= C.s.sputor nobase in out vis prt rna lin 5>3 func #= GRAM+.HIGH nobase -in out vis bold rna lin 5>3 func #= Frankia.1 nobase in out vis prt rna lin 5>3 func #= Frankia.2 nobase in out vis prt rna lin 5>3 func #= S.galbus nobase in out vis prt rna lin 5>3 func #= S.griseus nobase in out vis prt rna lin 5>3 func #= A.oriental nobase in out vis prt rna lin 5>3 func #= S.rimosus nobase in out vis prt rna lin 5>3 func #= S.mashuens nobase in out vis prt rna lin 5>3 func #= S.coelicol nobase in out vis prt rna lin 5>3 func #= S.ambofaci nobase in out vis prt rna lin 5>3 func #= S.livida.1 nobase in out vis prt rna lin 5>3 func #= S.livida.2 nobase in out vis prt rna lin 5>3 func #= M.luteus nobase in out vis prt rna lin 5>3 func #= A.utahensi nobase in out vis prt rna lin 5>3 func #= P.freudenr nobase in out vis prt rna lin 5>3 func #= M.avium nobase in out vis prt rna lin 5>3 func #= M.kansasii nobase in out vis prt rna lin 5>3 func #= M.gastri nobase in out vis prt rna lin 5>3 func #= M.leprae nobase in out vis prt rna lin 5>3 func #= M.tubercul nobase in out vis prt rna lin 5>3 func #= M.smegmati nobase in out vis prt rna lin 5>3 func #= M.phlei nobase in out vis prt rna lin 5>3 func #= M.paratube nobase in out vis prt rna lin 5>3 func #= R.erythrop nobase in out vis prt rna lin 5>3 func #= R.fascians nobase in out vis prt rna lin 5>3 func #= D.thermoph nobase in out vis prt rna lin 5>3 func #= P.frisinge nobase in out vis prt rna lin 5>3 func #= P.niger nobase in out vis prt rna lin 5>3 func #= GRAM+.LAC nobase -in out vis bold rna lin 5>3 func #= B.sp.PS3 nobase in out vis prt rna lin 5>3 func #= B.alcaloph nobase in out vis prt rna lin 5>3 func #= B.stearo.1 nobase in out vis prt rna lin 5>3 func #= B.stearo.2 nobase in out vis prt rna lin 5>3 func #= B.lichenif nobase in out vis prt rna lin 5>3 func #= S.epidermi nobase in out vis prt rna lin 5>3 func #= S.aureus.1 nobase in out vis prt rna lin 5>3 func #= S.aureus.2 nobase in out vis prt rna lin 5>3 func #= S.aureus.3 nobase in out vis prt rna lin 5>3 func #= S.carnosus nobase in out vis prt rna lin 5>3 func #= S.piscifer nobase in out vis prt rna lin 5>3 func #= S.condimen nobase in out vis prt rna lin 5>3 func #= B.anthraci nobase in out vis prt rna lin 5>3 func #= B.cereus.1 nobase in out vis prt rna lin 5>3 func #= B.cereus.2 nobase in out vis prt rna lin 5>3 func #= B.thuringi nobase in out vis prt rna lin 5>3 func #= B.globispo nobase in out vis prt rna lin 5>3 func #= B.subtil.W nobase in out vis prt rna lin 5>3 func #= B.subtil.O nobase in out vis prt rna lin 5>3 func #= B.subtil.J nobase in out vis prt rna lin 5>3 func #= B.subtil.I nobase in out vis prt rna lin 5>3 func #= B.subtil.H nobase in out vis prt rna lin 5>3 func #= B.subtil.G nobase in out vis prt rna lin 5>3 func #= B.subtil.E nobase in out vis prt rna lin 5>3 func #= B.subtil.D nobase in out vis prt rna lin 5>3 func #= B.subtil.B nobase in out vis prt rna lin 5>3 func #= B.subtil.A nobase in out vis prt rna lin 5>3 func #= B.subti.01 nobase in out vis prt rna lin 5>3 func #= B.subti.02 nobase in out vis prt rna lin 5>3 func #= B.subti.03 nobase in out vis prt rna lin 5>3 func #= B.subti.04 nobase in out vis prt rna lin 5>3 func #= B.subti.05 nobase in out vis prt rna lin 5>3 func #= B.subti.06 nobase in out vis prt rna lin 5>3 func #= B.subti.07 nobase in out vis prt rna lin 5>3 func #= B.subti.08 nobase in out vis prt rna lin 5>3 func #= B.subti.09 nobase in out vis prt rna lin 5>3 func #= B.subti.10 nobase in out vis prt rna lin 5>3 func #= B.subti.11 nobase in out vis prt rna lin 5>3 func #= B.subti.12 nobase in out vis prt rna lin 5>3 func #= L.monocy.1 nobase in out vis prt rna lin 5>3 func #= L.monocy.2 nobase in out vis prt rna lin 5>3 func #= L.monocy.3 nobase in out vis prt rna lin 5>3 func #= L.innocua nobase in out vis prt rna lin 5>3 func #= L.welshime nobase in out vis prt rna lin 5>3 func #= L.seeliger nobase in out vis prt rna lin 5>3 func #= L.ivanov.1 nobase in out vis prt rna lin 5>3 func #= L.ivanov.2 nobase in out vis prt rna lin 5>3 func #= L.grayi nobase in out vis prt rna lin 5>3 func #= L.murrayi nobase in out vis prt rna lin 5>3 func #= W.confusa nobase in out vis prt rna lin 5>3 func #= W.paramese nobase in out vis prt rna lin 5>3 func #= O.oeni nobase in out vis prt rna lin 5>3 func #= L.mesent.1 nobase in out vis prt rna lin 5>3 func #= L.mesent.2 nobase in out vis prt rna lin 5>3 func #= L.mes.dext nobase in out vis prt rna lin 5>3 func #= L.carnosum nobase in out vis prt rna lin 5>3 func #= Leu.lactis nobase in out vis prt rna lin 5>3 func #= L.delbruec nobase in out vis prt rna lin 5>3 func #= L.lactis.1 nobase in out vis prt rna lin 5>3 func #= L.lactis.2 nobase in out vis prt rna lin 5>3 func #= L.lactis.3 nobase in out vis prt rna lin 5>3 func #= S.uberis nobase in out vis prt rna lin 5>3 func #= S.thermoph nobase in out vis prt rna lin 5>3 func #= S.oralis nobase in out vis prt rna lin 5>3 func #= S.parauber nobase in out vis prt rna lin 5>3 func #= S.macedoni nobase in out vis prt rna lin 5>3 func #= GRAM+.MYCO nobase -in out vis bold rna lin 5>3 func #= M.capricol nobase in out vis prt rna lin 5>3 func #= M.genitali nobase in out vis prt rna lin 5>3 func #= M.pneumoni nobase in out vis prt rna lin 5>3 func #= M.gallis.1 nobase in out vis prt rna lin 5>3 func #= M.gallis.2 nobase in out vis prt rna lin 5>3 func #= M.floccula nobase in out vis prt rna lin 5>3 func #= M.hyopneum nobase in out vis prt rna lin 5>3 func #= GRAM+.CLOS nobase -in out vis bold rna lin 5>3 func #= C.histol.1 nobase in out vis prt rna lin 5>3 func #= C.histol.2 nobase in out vis prt rna lin 5>3 func #= C.histol.3 nobase in out vis prt rna lin 5>3 func #= C.botuli.a nobase in out vis prt rna lin 5>3 func #= C.botuli.b nobase in out vis prt rna lin 5>3 func #= C.botul.2b nobase in out vis prt rna lin 5>3 func #= C.botuli.e nobase in out vis prt rna lin 5>3 func #= C.botuli.f nobase in out vis prt rna lin 5>3 func #= C.tyrobuty nobase in out vis prt rna lin 5>3 func #- #:E.coli:name:Escherichia coli #:E.coli:subsp: #:E.coli:strain: #:E.coli:atcc:? #:E.coli:acs:J01695 #:E.coli:auth: #:E.coli:title: #:E.coli:jour:E.coli:who:Published #:E.coli:who:Published #:E.coli:date:July 11, 1980 #:E.coli:rem:Phylo:Eubacteria,Purple,gamma,3 #:AQUIFICALE:name: #:AQUIFICALE:subsp: #:AQUIFICALE:strain: #:AQUIFICALE:atcc: #:AQUIFICALE:acs:DIVIDER #:AQUIFICALE:auth: #:AQUIFICALE:title: #:AQUIFICALE:jour: #:AQUIFICALE:who:Robin Gutell,Chem-359,28595,7868901 #:AQUIFICALE:date:Thu May 21 19:38:19 1998 #:A.aeolicus:name:Aquifex aeolicus. #:A.aeolicus:subsp: #:A.aeolicus:strain: #:A.aeolicus:atcc: #:A.aeolicus:acs:AE000751, AE000709 #:A.aeolicus:auth:. #:A.aeolicus:title:Aquifex aeolicus #:A.aeolicus:jour:Nature 392 (6674), 353-358 (1998) #:A.aeolicus:who: #:A.aeolicus:date:30-OCT-1997 #:A.aeolicus:auth:Deckert,G., Warren,P.V., Gaasterland,T., Young,W.G., Lenox,A.L #:A.aeolicus:auth:., Graham,D.E., Overbeek,R., Snead,M.A., Keller,M., Aujay,M., #:A.aeolicus:auth:Huber,R., Feldman,R.A., Short,J.M., Olson,G.J. and Swanson,R.V #:A.aeolicus:title:The complete genome of the hyperthermophilic bacterium #:A.aeolicus:rem:ref:1 (bases 1 to 13534) #:A.aeolicus:rem:ref:2 (bases 1 to 13534) #:A.aeolicus:rem:auth:Deckert,G., Warren,P.V., Gaasterland,T., Young,W.G., #:A.aeolicus:rem:: Lenox,A.L., Graham,D.E., Overbeek,R., Snead,M.A., Keller,M., #:A.aeolicus:rem:: Aujay,M., Huber,R., Feldman,R.A., Short,J.M., Olson,G.J. #:A.aeolicus:rem:: and Swanson,R.V. #:A.aeolicus:rem:jour:Submitted (25-JUL-1997) Diversa Corporation, Genomics, #:A.aeolicus:rem:: San Diego, CA 92121 #:A.aeolicus:rem:title:Direct Submission #:A.aeolicus:rem:KEYWORDS:. #:A.aeolicus:rem:GenBank ACCESSION:AE0007 1 AE00 657 #:A.aeolicus:rem:Putative indicates no similarity to known proteins #:A.aeolicus:rem:Hypothetical indicates similarity to a protein of unknown #:A.aeolicus:rem:function. #:A.pyrophil:name:Aquifex pyrophilus #:A.pyrophil:subsp: #:A.pyrophil:strain: #:A.pyrophil:atcc: #:A.pyrophil:acs:Y15785 #:A.pyrophil:auth: #:A.pyrophil:title: #:A.pyrophil:jour: #:A.pyrophil:who: #:A.pyrophil:date: #:A.pyrophil:rem:LOCUS APY15785 2986 bp DNA BCT 11-DEC-1997 #:A.pyrophil:rem:DEFINITION Aquifex pyrophilus 23S rRNA gene. #:A.pyrophil:rem:ACCESSION Y15785 #:A.pyrophil:rem:NID g2687824 #:A.pyrophil:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene. #:A.pyrophil:rem:SOURCE Aquifex pyrophilus. #:A.pyrophil:rem: ORGANISM Aquifex pyrophilus #:A.pyrophil:rem: Eubacteria; Aquificales; Aquificaceae; Aquifex. #:A.pyrophil:rem:REFERENCE 1 (bases 1 to 2986) #:A.pyrophil:rem: AUTHORS Ludwig,W., Strunk,O., Klugbauer,S., Klugbauer,N., Weizenegger,M., #:A.pyrophil:rem: Neumaier,J., Bachleitner,M. and Schleifer,K.H. #:A.pyrophil:rem: TITLE Bacterial phylogeny based on comparative sequence analysis #:A.pyrophil:rem: JOURNAL Electrophoresis In press #:A.pyrophil:rem:REFERENCE 2 (bases 1 to 2986) #:A.pyrophil:rem: AUTHORS Ludwig,W. #:A.pyrophil:rem: TITLE Direct Submission #:A.pyrophil:rem: JOURNAL Submitted (04-DEC-1997) W. Ludwig, Lehrstuhl fuer Mikrobiologie, #:A.pyrophil:rem: Technische Universitaet Muenchen, Muenchen, FRG #:A.pyrophil:rem:FEATURES Location/Qualifiers #:A.pyrophil:rem: source 1..2986 #:A.pyrophil:rem: /organism="Aquifex pyrophilus" #:A.pyrophil:rem: /strain="DSM 6858" #:A.pyrophil:rem: /db_xref="taxon:2714" #:A.pyrophil:rem: rRNA <1..>2986 #:A.pyrophil:rem: /gene="23S rRNA" #:A.pyrophil:rem: /product="23S ribosomal RNA" #:A.pyrophil:rem: gene 1..2986 #:A.pyrophil:rem: /gene="23S rRNA" #:A.pyrophil:rem:BASE COUNT 642 a 843 c 1088 g 413 t #:A.pyrophil:rem:ORIGIN #:THERMOTOGA:name: #:THERMOTOGA:subsp: #:THERMOTOGA:strain: #:THERMOTOGA:atcc: #:THERMOTOGA:acs:DIVIDER #:THERMOTOGA:auth: #:THERMOTOGA:title: #:THERMOTOGA:jour: #:THERMOTOGA:who:Robin Gutell,MCDB-256,28595,7868901 #:THERMOTOGA:date:Fri Dec 17 13:21:57 1993 #:F.islandic:auth:,M., Neumaier,J., Bachleitner,M. and Schleifer,K.H. #:F.islandic:name:Fervidobacterium islandicum. #:F.islandic:subsp: #:F.islandic:strain: #:F.islandic:atcc: #:F.islandic:acs:Y15790 #:F.islandic:auth:Ludwig,W., Strunk,O., Klugbauer,S., Klugbauer,N., Weizenegger #:F.islandic:title:Bacterial phylogeny based on comparative sequence analysis #:F.islandic:jour:Electrophoresis In press #:F.islandic:who: #:F.islandic:date:11-DEC-1997 #:F.islandic:rem:ref:1 (bases 1 to 2992) #:F.islandic:rem:ref:2 (bases 1 to 2992) #:F.islandic:rem:auth:Ludwig,W. #:F.islandic:rem:jour:Submitted (04-DEC-1997) W. Ludwig, Lehrstuhl fuer #:F.islandic:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:F.islandic:rem:: FRG #:F.islandic:rem:title:Direct Submission #:F.islandic:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:F.islandic:rem:GenBank ACCESSION:Y15790 #:T.maritima:name:Thermotoga maritima #:T.maritima:subsp: #:T.maritima:strain: #:T.maritima:atcc: #:T.maritima:acs:M67498 #:T.maritima:auth: #:T.maritima:title: #:T.maritima:jour: #:T.maritima:who: #:T.maritima:date: #:T.maritima:rem:LOCUS TMORRNAA 3023 bp ss-rRNA RNA 28-MAY-1992 #:T.maritima:rem:DEFINITION Thermotoga maritima large subunit ribosomal RNA, complete. #:T.maritima:rem:ACCESSION M67498 #:T.maritima:rem:KEYWORDS large subunit ribosomal RNA. #:T.maritima:rem:SOURCE Thermotoga maritima rRNA. #:T.maritima:rem: ORGANISM Thermotoga maritima #:T.maritima:rem: Prokaryota; Bacteria; Eubacteriomycetes; Eubacteriales. #:T.maritima:rem:REFERENCE 1 (bases 1 to 3023) #:T.maritima:rem: AUTHORS Achenbach,L. and Woese,C.R. #:T.maritima:rem: TITLE Sequence of the ribosomal operon of Thermotoga maritima #:T.maritima:rem: JOURNAL Unpublished (1991) #:T.maritima:rem: STANDARD full staff_entry #:T.maritima:rem:FEATURES Location/Qualifiers #:T.maritima:rem: rRNA 1..3023 #:T.maritima:rem: /product="large subunit ribosomal RNA" #:T.maritima:rem: /gene="large subunit rRNA" #:T.maritima:rem:BASE COUNT 660 a 812 c 1093 g 458 t #:T.maritima:rem:ORIGIN #:RADIO-RESI:name: #:RADIO-RESI:subsp: #:RADIO-RESI:strain: #:RADIO-RESI:atcc: #:RADIO-RESI:acs:DIVIDER #:RADIO-RESI:auth: #:RADIO-RESI:title: #:RADIO-RESI:jour: #:RADIO-RESI:who:Robin Gutell,MCDB-256,28595,7868901 #:RADIO-RESI:date:Fri Dec 17 13:24:00 1993 #:T.thermoph:name:Thermus thermophilus #:T.thermoph:subsp: #:T.thermoph:strain: #:T.thermoph:atcc: #:T.thermoph:acs:X12612 #:T.thermoph:auth:Ludwig,W. #:T.thermoph:title: #:T.thermoph:jour: #:T.thermoph:who: #:T.thermoph:date: #:T.thermoph:rem:LOCUS X12612 2915 bp UNA 15-JUN-1989 #:T.thermoph:rem:DEFINITION Thermus thermophilus gene for 23S rRNA. #:T.thermoph:rem:ACCESSION X12612 #:T.thermoph:rem:REFERENCE 1 (bases 1 to 2915; enum. 1 to 2915) #:T.thermoph:rem: AUTHORS Ludwig,W. #:T.thermoph:rem: TITLE ; #:T.thermoph:rem: JOURNAL Unpublished (1988) see COMMENT for author address #:T.thermoph:rem: STANDARD unannotated staff_entry #:T.thermoph:rem:REFERENCE 2 (bases ??) #:T.thermoph:rem: AUTHORS Hoepfl,P., Ludwig,W., Hartmann,R.K., Ulbrich,N. and Schleifer,K.H. #:T.thermoph:rem: TITLE Complete nucleotide sequence of 23S ribosomal RNA gene from Thermus #:T.thermoph:rem: thermophilus HB8 #:T.thermoph:rem: JOURNAL Nucleic Acids Res. 16, 9043-9043 (1988) #:T.thermoph:rem: STANDARD unannotated staff_entry #:T.thermoph:rem:BASE COUNT 636 a 794 c 1066 g 419 t #:T.thermoph:rem:ORIGIN #:FLE-CYT-BA:name: #:FLE-CYT-BA:subsp: #:FLE-CYT-BA:strain: #:FLE-CYT-BA:atcc: #:FLE-CYT-BA:acs:DIVIDER #:FLE-CYT-BA:auth: #:FLE-CYT-BA:title: #:FLE-CYT-BA:jour: #:FLE-CYT-BA:who:Robin Gutell,MCDB-256,28595,7868901 #:FLE-CYT-BA:date:Fri Dec 17 13:20:16 1993 #:M.odoratus:name:Myroides odoratus. #:M.odoratus:subsp: #:M.odoratus:strain:was Flavobacterium odoratum #:M.odoratus:atcc: #:M.odoratus:acs:M32365 M62807 #:M.odoratus:auth:Woese,C.R., Mandelco,L., Yang,D., Gherna,R. and Madigan,M.T. #:M.odoratus:title: #:M.odoratus:jour: #:M.odoratus:who: #:M.odoratus:date: #:F.flexilis:name:Flexibacter flexilis #:F.flexilis:subsp: #:F.flexilis:strain: #:F.flexilis:atcc: #:F.flexilis:acs:M31906 M62806 #:F.flexilis:auth:Woese,C.R., Mandelco,L., Yang,D., Gherna,R. and Madigan,M.T. #:F.flexilis:title: #:F.flexilis:jour: #:F.flexilis:who: #:F.flexilis:date: #:GREENSULFU:name: #:GREENSULFU:subsp: #:GREENSULFU:strain: #:GREENSULFU:atcc: #:GREENSULFU:acs:DIVIDER #:GREENSULFU:auth: #:GREENSULFU:title: #:GREENSULFU:jour: #:GREENSULFU:who:Robin Gutell,MCDB-256,28595,7868901 #:GREENSULFU:date:Fri Dec 17 13:20:57 1993 #:C.limicola:name:Chlorobium limicola #:C.limicola:subsp: #:C.limicola:strain: #:C.limicola:atcc: #:C.limicola:acs:M31904 M62805 #:C.limicola:auth:Woese,C.R., Mandelco,L., Yang,D., Gherna,R. and Madigan,M.T. #:C.limicola:title: #:C.limicola:jour: #:C.limicola:who: #:C.limicola:date: #:PLANCTOMYC:name: #:PLANCTOMYC:subsp: #:PLANCTOMYC:strain: #:PLANCTOMYC:atcc: #:PLANCTOMYC:acs:DIVIDER #:PLANCTOMYC:auth: #:PLANCTOMYC:title: #:PLANCTOMYC:jour: #:PLANCTOMYC:who:Robin Gutell,MCDB-256,28595,7868901 #:PLANCTOMYC:date:Fri Dec 17 13:24:30 1993 #:C.pneumo.1:title:gene are phylogenetic markers for Chlamydia spp #:C.pneumo.1:name:Chlamydia pneumoniae. #:C.pneumo.1:subsp: #:C.pneumo.1:strain: #:C.pneumo.1:atcc: #:C.pneumo.1:acs:U68421 #:C.pneumo.1:auth:Everett,K.D. and Andersen,A.A. #:C.pneumo.1:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pneumo.1:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pneumo.1:who: #:C.pneumo.1:date:18-SEP-1997 #:C.pneumo.1:rem:ref:1 (bases 1 to 1282) #:C.pneumo.1:rem:ref:2 (bases 1 to 1282) #:C.pneumo.1:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pneumo.1:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pneumo.1:rem:: Ames, IA 50010, USA #:C.pneumo.1:rem:title:Direct Submission #:C.pneumo.1:rem:KEYWORDS:. #:C.pneumo.1:rem:GenBank ACCESSION:U68421 #:C.pneumo.2:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pneumo.2:name:Chlamydia pneumoniae. #:C.pneumo.2:subsp: #:C.pneumo.2:strain: #:C.pneumo.2:atcc: #:C.pneumo.2:acs:U68422 #:C.pneumo.2:auth:Everett,K.D. and Andersen,A.A. #:C.pneumo.2:title:gene are phylogenetic markers for Chlamydia spp #:C.pneumo.2:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pneumo.2:who: #:C.pneumo.2:date:18-SEP-1997 #:C.pneumo.2:rem:ref:1 (bases 1 to 1284) #:C.pneumo.2:rem:ref:2 (bases 1 to 1284) #:C.pneumo.2:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pneumo.2:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pneumo.2:rem:: Ames, IA 50010, USA #:C.pneumo.2:rem:title:Direct Submission #:C.pneumo.2:rem:KEYWORDS:. #:C.pneumo.2:rem:GenBank ACCESSION:U68422 #:C.pneumo.3:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pneumo.3:name:Chlamydia pneumoniae. #:C.pneumo.3:subsp: #:C.pneumo.3:strain: #:C.pneumo.3:atcc: #:C.pneumo.3:acs:U68423 #:C.pneumo.3:auth:Everett,K.D. and Andersen,A.A. #:C.pneumo.3:title:gene are phylogenetic markers for Chlamydia spp #:C.pneumo.3:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pneumo.3:who: #:C.pneumo.3:date:18-SEP-1997 #:C.pneumo.3:rem:ref:1 (bases 1 to 1284) #:C.pneumo.3:rem:ref:2 (bases 1 to 1284) #:C.pneumo.3:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pneumo.3:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pneumo.3:rem:: Ames, IA 50010, USA #:C.pneumo.3:rem:title:Direct Submission #:C.pneumo.3:rem:KEYWORDS:. #:C.pneumo.3:rem:GenBank ACCESSION:U68423 #:C.pneumo.4:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pneumo.4:name:Chlamydia pneumoniae. #:C.pneumo.4:subsp: #:C.pneumo.4:strain: #:C.pneumo.4:atcc: #:C.pneumo.4:acs:U68424 #:C.pneumo.4:auth:Everett,K.D. and Andersen,A.A. #:C.pneumo.4:title:gene are phylogenetic markers for Chlamydia spp #:C.pneumo.4:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pneumo.4:who: #:C.pneumo.4:date:18-SEP-1997 #:C.pneumo.4:rem:ref:1 (bases 1 to 1284) #:C.pneumo.4:rem:ref:2 (bases 1 to 1284) #:C.pneumo.4:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pneumo.4:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pneumo.4:rem:: Ames, IA 50010, USA #:C.pneumo.4:rem:title:Direct Submission #:C.pneumo.4:rem:KEYWORDS:. #:C.pneumo.4:rem:GenBank ACCESSION:U68424 #:C.pneumo.5:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pneumo.5:name:Chlamydia pneumoniae. #:C.pneumo.5:subsp: #:C.pneumo.5:strain: #:C.pneumo.5:atcc: #:C.pneumo.5:acs:U68425 #:C.pneumo.5:auth:Everett,K.D. and Andersen,A.A. #:C.pneumo.5:title:gene are phylogenetic markers for Chlamydia spp #:C.pneumo.5:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pneumo.5:who: #:C.pneumo.5:date:18-SEP-1997 #:C.pneumo.5:rem:ref:1 (bases 1 to 1284) #:C.pneumo.5:rem:ref:2 (bases 1 to 1284) #:C.pneumo.5:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pneumo.5:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pneumo.5:rem:: Ames, IA 50010, USA #:C.pneumo.5:rem:title:Direct Submission #:C.pneumo.5:rem:KEYWORDS:. #:C.pneumo.5:rem:GenBank ACCESSION:U68425 #:C.pneumo.6:title:gene are phylogenetic markers for Chlamydia spp #:C.pneumo.6:name:Chlamydia pneumoniae. #:C.pneumo.6:subsp: #:C.pneumo.6:strain: #:C.pneumo.6:atcc: #:C.pneumo.6:acs:U68426 #:C.pneumo.6:auth:Everett,K.D. and Andersen,A.A. #:C.pneumo.6:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pneumo.6:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pneumo.6:who: #:C.pneumo.6:date:18-SEP-1997 #:C.pneumo.6:rem:ref:1 (bases 1 to 1284) #:C.pneumo.6:rem:ref:2 (bases 1 to 1284) #:C.pneumo.6:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pneumo.6:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pneumo.6:rem:: Ames, IA 50010, USA #:C.pneumo.6:rem:title:Direct Submission #:C.pneumo.6:rem:KEYWORDS:. #:C.pneumo.6:rem:GenBank ACCESSION:U68426 #:C.trach.01:auth:Aravind,L., Mitchell,W.P., Olinger,L., Tatusov,R.L., Zhao,Q., #:C.trach.01:auth:Koonin,E.V. and Davis,R.W. #:C.trach.01:title:Humans: Chlamydia trachomatis #:C.trach.01:name:Chlamydia trachomatis. #:C.trach.01:subsp: #:C.trach.01:strain: #:C.trach.01:atcc: #:C.trach.01:acs:AE001345 #:C.trach.01:auth:Stephens,R.S., Kalman,S., Lammel,C.J., Fan,J., Marathe,R., #:C.trach.01:title:Genome Sequence of an Obligate Intracellular Pathogen of #:C.trach.01:jour:Unpublished #:C.trach.01:who: #:C.trach.01:date:20-MAY-1998 #:C.trach.01:rem:ref:1 (bases 1 to 10050) #:C.trach.01:rem:ref:2 (bases 1 to 10050) #:C.trach.01:rem:auth:Stephens,R.S., Kalman,S., Lammel,C.J., Fan,J., Marathe,R., #:C.trach.01:rem:: Aravind,L., Mitchell,W.P., Olinger,L., Tatusov,R.L., Zhao, #:C.trach.01:rem:: Q., Koonin,E.V. and Davis,R.W. #:C.trach.01:rem:jour:Submitted (20-MAY-1998) Program in Infectious Diseases, #:C.trach.01:rem:: University of California, 235 Warren Hall, Berkeley, CA #:C.trach.01:rem:: 94720-7360, USA #:C.trach.01:rem:title:Direct Submission #:C.trach.01:rem:KEYWORDS:. #:C.trach.01:rem:GenBank ACCESSION:AE0013 5 AE00 273 #:C.trach.02:auth:Koonin,E.V. and Davis,R.W. #:C.trach.02:auth:Stephens,R.S., Kalman,S., Lammel,C.J., Fan,J., Marathe,R., #:C.trach.02:title:Genome Sequence of an Obligate Intracellular Pathogen of #:C.trach.02:name:Chlamydia trachomatis. #:C.trach.02:subsp: #:C.trach.02:strain: #:C.trach.02:atcc: #:C.trach.02:acs:AE001347 #:C.trach.02:auth:Aravind,L., Mitchell,W.P., Olinger,L., Tatusov,R.L., Zhao,Q., #:C.trach.02:title:Humans: Chlamydia trachomatis #:C.trach.02:jour:Unpublished #:C.trach.02:who: #:C.trach.02:date:20-MAY-1998 #:C.trach.02:rem:ref:1 (bases 1 to 10382) #:C.trach.02:rem:ref:2 (bases 1 to 10382) #:C.trach.02:rem:auth:Stephens,R.S., Kalman,S., Lammel,C.J., Fan,J., Marathe,R., #:C.trach.02:rem:: Aravind,L., Mitchell,W.P., Olinger,L., Tatusov,R.L., Zhao, #:C.trach.02:rem:: Q., Koonin,E.V. and Davis,R.W. #:C.trach.02:rem:jour:Submitted (20-MAY-1998) Program in Infectious Diseases, #:C.trach.02:rem:: University of California, 235 Warren Hall, Berkeley, CA #:C.trach.02:rem:: 94720-7360, USA #:C.trach.02:rem:title:Direct Submission #:C.trach.02:rem:KEYWORDS:. #:C.trach.02:rem:GenBank ACCESSION:AE0013 7 AE00 273 #:C.trach.03:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.03:name:Chlamydia trachomatis. #:C.trach.03:subsp: #:C.trach.03:strain: #:C.trach.03:atcc: #:C.trach.03:acs:U68420 #:C.trach.03:auth:Everett,K.D. and Andersen,A.A. #:C.trach.03:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.03:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.03:who: #:C.trach.03:date:18-SEP-1997 #:C.trach.03:rem:ref:1 (bases 1 to 2762) #:C.trach.03:rem:ref:2 (bases 1 to 2762) #:C.trach.03:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.03:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.03:rem:: Ames, IA 50010, USA #:C.trach.03:rem:title:Direct Submission #:C.trach.03:rem:KEYWORDS:. #:C.trach.03:rem:GenBank ACCESSION:U68420 #:C.trach.04:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.04:name:Chlamydia trachomatis. #:C.trach.04:subsp: #:C.trach.04:strain: #:C.trach.04:atcc: #:C.trach.04:acs:U68443 #:C.trach.04:auth:Everett,K.D. and Andersen,A.A. #:C.trach.04:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.04:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.04:who: #:C.trach.04:date:18-SEP-1997 #:C.trach.04:rem:ref:1 (bases 1 to 1304) #:C.trach.04:rem:ref:2 (bases 1 to 1304) #:C.trach.04:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.04:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.04:rem:: Ames, IA 50010, USA #:C.trach.04:rem:title:Direct Submission #:C.trach.04:rem:KEYWORDS:. #:C.trach.04:rem:GenBank ACCESSION:U68443 #:C.trach.05:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.05:name:Chlamydia trachomatis. #:C.trach.05:subsp: #:C.trach.05:strain: #:C.trach.05:atcc: #:C.trach.05:acs:U68427 #:C.trach.05:auth:Everett,K.D. and Andersen,A.A. #:C.trach.05:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.05:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.05:who: #:C.trach.05:date:18-SEP-1997 #:C.trach.05:rem:ref:1 (bases 1 to 1299) #:C.trach.05:rem:ref:2 (bases 1 to 1299) #:C.trach.05:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.05:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.05:rem:: Ames, IA 50010, USA #:C.trach.05:rem:title:Direct Submission #:C.trach.05:rem:KEYWORDS:. #:C.trach.05:rem:GenBank ACCESSION:U68427 #:C.trach.06:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.06:name:Chlamydia trachomatis. #:C.trach.06:subsp: #:C.trach.06:strain: #:C.trach.06:atcc: #:C.trach.06:acs:U68428 #:C.trach.06:auth:Everett,K.D. and Andersen,A.A. #:C.trach.06:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.06:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.06:who: #:C.trach.06:date:18-SEP-1997 #:C.trach.06:rem:ref:1 (bases 1 to 1299) #:C.trach.06:rem:ref:2 (bases 1 to 1299) #:C.trach.06:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.06:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.06:rem:: Ames, IA 50010, USA #:C.trach.06:rem:title:Direct Submission #:C.trach.06:rem:KEYWORDS:. #:C.trach.06:rem:GenBank ACCESSION:U68428 #:C.trach.07:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.07:name:Chlamydia trachomatis. #:C.trach.07:subsp: #:C.trach.07:strain: #:C.trach.07:atcc: #:C.trach.07:acs:U68429 #:C.trach.07:auth:Everett,K.D. and Andersen,A.A. #:C.trach.07:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.07:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.07:who: #:C.trach.07:date:18-SEP-1997 #:C.trach.07:rem:ref:1 (bases 1 to 1298) #:C.trach.07:rem:ref:2 (bases 1 to 1298) #:C.trach.07:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.07:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.07:rem:: Ames, IA 50010, USA #:C.trach.07:rem:title:Direct Submission #:C.trach.07:rem:KEYWORDS:. #:C.trach.07:rem:GenBank ACCESSION:U68429 #:C.trach.08:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.08:name:Chlamydia trachomatis. #:C.trach.08:subsp: #:C.trach.08:strain: #:C.trach.08:atcc: #:C.trach.08:acs:U68430 #:C.trach.08:auth:Everett,K.D. and Andersen,A.A. #:C.trach.08:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.08:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.08:who: #:C.trach.08:date:18-SEP-1997 #:C.trach.08:rem:ref:1 (bases 1 to 1302) #:C.trach.08:rem:ref:2 (bases 1 to 1302) #:C.trach.08:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.08:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.08:rem:: Ames, IA 50010, USA #:C.trach.08:rem:title:Direct Submission #:C.trach.08:rem:KEYWORDS:. #:C.trach.08:rem:GenBank ACCESSION:U68430 #:C.trach.09:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.09:name:Chlamydia trachomatis. #:C.trach.09:subsp: #:C.trach.09:strain: #:C.trach.09:atcc: #:C.trach.09:acs:U68436 #:C.trach.09:auth:Everett,K.D. and Andersen,A.A. #:C.trach.09:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.09:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.09:who: #:C.trach.09:date:18-SEP-1997 #:C.trach.09:rem:ref:1 (bases 1 to 1303) #:C.trach.09:rem:ref:2 (bases 1 to 1303) #:C.trach.09:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.09:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.09:rem:: Ames, IA 50010, USA #:C.trach.09:rem:title:Direct Submission #:C.trach.09:rem:KEYWORDS:. #:C.trach.09:rem:GenBank ACCESSION:U68436 #:C.trach.10:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.10:name:Chlamydia trachomatis. #:C.trach.10:subsp: #:C.trach.10:strain: #:C.trach.10:atcc: #:C.trach.10:acs:U68437 #:C.trach.10:auth:Everett,K.D. and Andersen,A.A. #:C.trach.10:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.10:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.10:who: #:C.trach.10:date:18-SEP-1997 #:C.trach.10:rem:ref:1 (bases 1 to 1303) #:C.trach.10:rem:ref:2 (bases 1 to 1303) #:C.trach.10:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.10:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.10:rem:: Ames, IA 50010, USA #:C.trach.10:rem:title:Direct Submission #:C.trach.10:rem:KEYWORDS:. #:C.trach.10:rem:GenBank ACCESSION:U68437 #:C.trach.11:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.11:name:Chlamydia trachomatis. #:C.trach.11:subsp: #:C.trach.11:strain: #:C.trach.11:atcc: #:C.trach.11:acs:U68438 #:C.trach.11:auth:Everett,K.D. and Andersen,A.A. #:C.trach.11:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.11:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.11:who: #:C.trach.11:date:18-SEP-1997 #:C.trach.11:rem:ref:1 (bases 1 to 1304) #:C.trach.11:rem:ref:2 (bases 1 to 1304) #:C.trach.11:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.11:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.11:rem:: Ames, IA 50010, USA #:C.trach.11:rem:title:Direct Submission #:C.trach.11:rem:KEYWORDS:. #:C.trach.11:rem:GenBank ACCESSION:U68438 #:C.trach.12:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.12:name:Chlamydia trachomatis. #:C.trach.12:subsp: #:C.trach.12:strain: #:C.trach.12:atcc: #:C.trach.12:acs:U68440 #:C.trach.12:auth:Everett,K.D. and Andersen,A.A. #:C.trach.12:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.12:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.12:who: #:C.trach.12:date:18-SEP-1997 #:C.trach.12:rem:ref:1 (bases 1 to 1304) #:C.trach.12:rem:ref:2 (bases 1 to 1304) #:C.trach.12:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.12:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.12:rem:: Ames, IA 50010, USA #:C.trach.12:rem:title:Direct Submission #:C.trach.12:rem:KEYWORDS:. #:C.trach.12:rem:GenBank ACCESSION:U68440 #:C.trach.13:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.13:name:Chlamydia trachomatis. #:C.trach.13:subsp: #:C.trach.13:strain: #:C.trach.13:atcc: #:C.trach.13:acs:U68441 #:C.trach.13:auth:Everett,K.D. and Andersen,A.A. #:C.trach.13:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.13:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.13:who: #:C.trach.13:date:18-SEP-1997 #:C.trach.13:rem:ref:1 (bases 1 to 1304) #:C.trach.13:rem:ref:2 (bases 1 to 1304) #:C.trach.13:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.13:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.13:rem:: Ames, IA 50010, USA #:C.trach.13:rem:title:Direct Submission #:C.trach.13:rem:KEYWORDS:. #:C.trach.13:rem:GenBank ACCESSION:U68441 #:C.trach.14:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.trach.14:name:Chlamydia trachomatis. #:C.trach.14:subsp: #:C.trach.14:strain: #:C.trach.14:atcc: #:C.trach.14:acs:U68442 #:C.trach.14:auth:Everett,K.D. and Andersen,A.A. #:C.trach.14:title:gene are phylogenetic markers for Chlamydia spp #:C.trach.14:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.trach.14:who: #:C.trach.14:date:18-SEP-1997 #:C.trach.14:rem:ref:1 (bases 1 to 1304) #:C.trach.14:rem:ref:2 (bases 1 to 1304) #:C.trach.14:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.trach.14:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.trach.14:rem:: Ames, IA 50010, USA #:C.trach.14:rem:title:Direct Submission #:C.trach.14:rem:KEYWORDS:. #:C.trach.14:rem:GenBank ACCESSION:U68442 #:Chlamyd.sp:auth:Mueller,K.D. and Michl,R. #:Chlamyd.sp:title:related to Chlamydia #:Chlamyd.sp:name:Chlamydia sp. #:Chlamyd.sp:subsp: #:Chlamyd.sp:strain: #:Chlamyd.sp:atcc: #:Chlamyd.sp:acs:Y07555 #:Chlamyd.sp:auth:Amann,R., Springer,N., Schoenhuber,W., Ludwig,W., Schmid,E.N., #:Chlamyd.sp:title:Obligate intracellular bacterial parasites of Acanhamoebae #:Chlamyd.sp:jour:Appl. Environ. Microbiol. In press #:Chlamyd.sp:who: #:Chlamyd.sp:date:14-AUG-1996 #:Chlamyd.sp:rem:ref:1 (bases 1 to 3029) #:Chlamyd.sp:rem:ref:2 (bases 1 to 3029) #:Chlamyd.sp:rem:auth:Ludwig,W. #:Chlamyd.sp:rem:jour:Submitted (13-AUG-1996) W. Ludwig, TU Muenchen, Lehrstuhl #:Chlamyd.sp:rem:: fuer Mikrobiologie, D-80290 Muenchen, Germany, FRG #:Chlamyd.sp:rem:title:Direct Submission #:Chlamyd.sp:rem:KEYWORDS:large subunit ribosomal RNA. #:Chlamyd.sp:rem:GenBank ACCESSION:Y07555 #:C.pecoru.1:title:gene are phylogenetic markers for Chlamydia spp #:C.pecoru.1:name:Chlamydia pecorum. #:C.pecoru.1:subsp: #:C.pecoru.1:strain: #:C.pecoru.1:atcc: #:C.pecoru.1:acs:U68431 #:C.pecoru.1:auth:Everett,K.D. and Andersen,A.A. #:C.pecoru.1:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pecoru.1:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pecoru.1:who: #:C.pecoru.1:date:18-SEP-1997 #:C.pecoru.1:rem:ref:1 (bases 1 to 1284) #:C.pecoru.1:rem:ref:2 (bases 1 to 1284) #:C.pecoru.1:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pecoru.1:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pecoru.1:rem:: Ames, IA 50010, USA #:C.pecoru.1:rem:title:Direct Submission #:C.pecoru.1:rem:KEYWORDS:. #:C.pecoru.1:rem:GenBank ACCESSION:U68431 #:C.pecoru.2:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pecoru.2:name:Chlamydia pecorum. #:C.pecoru.2:subsp: #:C.pecoru.2:strain: #:C.pecoru.2:atcc: #:C.pecoru.2:acs:U68432 #:C.pecoru.2:auth:Everett,K.D. and Andersen,A.A. #:C.pecoru.2:title:gene are phylogenetic markers for Chlamydia spp #:C.pecoru.2:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pecoru.2:who: #:C.pecoru.2:date:18-SEP-1997 #:C.pecoru.2:rem:ref:1 (bases 1 to 1284) #:C.pecoru.2:rem:ref:2 (bases 1 to 1284) #:C.pecoru.2:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pecoru.2:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pecoru.2:rem:: Ames, IA 50010, USA #:C.pecoru.2:rem:title:Direct Submission #:C.pecoru.2:rem:KEYWORDS:. #:C.pecoru.2:rem:GenBank ACCESSION:U68432 #:C.pecoru.3:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pecoru.3:name:Chlamydia pecorum. #:C.pecoru.3:subsp: #:C.pecoru.3:strain: #:C.pecoru.3:atcc: #:C.pecoru.3:acs:U68433 #:C.pecoru.3:auth:Everett,K.D. and Andersen,A.A. #:C.pecoru.3:title:gene are phylogenetic markers for Chlamydia spp #:C.pecoru.3:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pecoru.3:who: #:C.pecoru.3:date:18-SEP-1997 #:C.pecoru.3:rem:ref:1 (bases 1 to 1284) #:C.pecoru.3:rem:ref:2 (bases 1 to 1284) #:C.pecoru.3:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pecoru.3:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pecoru.3:rem:: Ames, IA 50010, USA #:C.pecoru.3:rem:title:Direct Submission #:C.pecoru.3:rem:KEYWORDS:. #:C.pecoru.3:rem:GenBank ACCESSION:U68433 #:C.pecoru.4:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pecoru.4:name:Chlamydia pecorum. #:C.pecoru.4:subsp: #:C.pecoru.4:strain: #:C.pecoru.4:atcc: #:C.pecoru.4:acs:U68434 #:C.pecoru.4:auth:Everett,K.D. and Andersen,A.A. #:C.pecoru.4:title:gene are phylogenetic markers for Chlamydia spp #:C.pecoru.4:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pecoru.4:who: #:C.pecoru.4:date:18-SEP-1997 #:C.pecoru.4:rem:ref:1 (bases 1 to 1284) #:C.pecoru.4:rem:ref:2 (bases 1 to 1284) #:C.pecoru.4:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pecoru.4:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pecoru.4:rem:: Ames, IA 50010, USA #:C.pecoru.4:rem:title:Direct Submission #:C.pecoru.4:rem:KEYWORDS:. #:C.pecoru.4:rem:GenBank ACCESSION:U68434 #:C.pecoru.5:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pecoru.5:name:Chlamydia pecorum. #:C.pecoru.5:subsp: #:C.pecoru.5:strain: #:C.pecoru.5:atcc: #:C.pecoru.5:acs:U68435 #:C.pecoru.5:auth:Everett,K.D. and Andersen,A.A. #:C.pecoru.5:title:gene are phylogenetic markers for Chlamydia spp #:C.pecoru.5:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pecoru.5:who: #:C.pecoru.5:date:18-SEP-1997 #:C.pecoru.5:rem:ref:1 (bases 1 to 1284) #:C.pecoru.5:rem:ref:2 (bases 1 to 1284) #:C.pecoru.5:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pecoru.5:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pecoru.5:rem:: Ames, IA 50010, USA #:C.pecoru.5:rem:title:Direct Submission #:C.pecoru.5:rem:KEYWORDS:. #:C.pecoru.5:rem:GenBank ACCESSION:U68435 #:C.pecoru.6:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.pecoru.6:name:Chlamydia pecorum. #:C.pecoru.6:subsp: #:C.pecoru.6:strain: #:C.pecoru.6:atcc: #:C.pecoru.6:acs:U68439 #:C.pecoru.6:auth:Everett,K.D. and Andersen,A.A. #:C.pecoru.6:title:gene are phylogenetic markers for Chlamydia spp #:C.pecoru.6:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.pecoru.6:who: #:C.pecoru.6:date:18-SEP-1997 #:C.pecoru.6:rem:ref:1 (bases 1 to 1284) #:C.pecoru.6:rem:ref:2 (bases 1 to 1284) #:C.pecoru.6:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.pecoru.6:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.pecoru.6:rem:: Ames, IA 50010, USA #:C.pecoru.6:rem:title:Direct Submission #:C.pecoru.6:rem:KEYWORDS:. #:C.pecoru.6:rem:GenBank ACCESSION:U68439 #:C.psitt.01:name:Chlamydia psittaci NJ1 #:C.psitt.01:subsp: #:C.psitt.01:strain: #:C.psitt.01:atcc: #:C.psitt.01:acs:U68419 #:C.psitt.01:auth: #:C.psitt.01:title: #:C.psitt.01:jour: #:C.psitt.01:who:Robin Gutell,Chem-359,28595,7868901 #:C.psitt.01:date:Wed Oct 29 15:06:36 1997 #:C.psitt.02:name:Chlamydia psittaci 6BC #:C.psitt.02:subsp: #:C.psitt.02:strain: #:C.psitt.02:atcc: #:C.psitt.02:acs:U68447 #:C.psitt.02:auth: #:C.psitt.02:title: #:C.psitt.02:jour: #:C.psitt.02:who:Robin Gutell,Chem-359,28595,7868901 #:C.psitt.02:date:Wed Oct 29 15:06:36 1997 #:C.psitt.03:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.03:name:Chlamydia psittaci. #:C.psitt.03:subsp: #:C.psitt.03:strain: #:C.psitt.03:atcc: #:C.psitt.03:acs:U68450 #:C.psitt.03:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.03:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.03:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.03:who: #:C.psitt.03:date:18-SEP-1997 #:C.psitt.03:rem:ref:1 (bases 1 to 1284) #:C.psitt.03:rem:ref:2 (bases 1 to 1284) #:C.psitt.03:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.03:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.03:rem:: Ames, IA 50010, USA #:C.psitt.03:rem:title:Direct Submission #:C.psitt.03:rem:KEYWORDS:. #:C.psitt.03:rem:GenBank ACCESSION:U68450 #:C.psitt.04:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.04:name:Chlamydia psittaci. #:C.psitt.04:subsp: #:C.psitt.04:strain: #:C.psitt.04:atcc: #:C.psitt.04:acs:U68451 #:C.psitt.04:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.04:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.04:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.04:who: #:C.psitt.04:date:18-SEP-1997 #:C.psitt.04:rem:ref:1 (bases 1 to 1284) #:C.psitt.04:rem:ref:2 (bases 1 to 1284) #:C.psitt.04:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.04:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.04:rem:: Ames, IA 50010, USA #:C.psitt.04:rem:title:Direct Submission #:C.psitt.04:rem:KEYWORDS:. #:C.psitt.04:rem:GenBank ACCESSION:U68451 #:C.psitt.05:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.05:name:Chlamydia psittaci. #:C.psitt.05:subsp: #:C.psitt.05:strain: #:C.psitt.05:atcc: #:C.psitt.05:acs:U68452 #:C.psitt.05:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.05:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.05:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.05:who: #:C.psitt.05:date:18-SEP-1997 #:C.psitt.05:rem:ref:1 (bases 1 to 1284) #:C.psitt.05:rem:ref:2 (bases 1 to 1284) #:C.psitt.05:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.05:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.05:rem:: Ames, IA 50010, USA #:C.psitt.05:rem:title:Direct Submission #:C.psitt.05:rem:KEYWORDS:. #:C.psitt.05:rem:GenBank ACCESSION:U68452 #:C.psitt.06:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.06:name:Chlamydia psittaci. #:C.psitt.06:subsp: #:C.psitt.06:strain: #:C.psitt.06:atcc: #:C.psitt.06:acs:U68453 #:C.psitt.06:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.06:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.06:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.06:who: #:C.psitt.06:date:18-SEP-1997 #:C.psitt.06:rem:ref:1 (bases 1 to 1283) #:C.psitt.06:rem:ref:2 (bases 1 to 1283) #:C.psitt.06:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.06:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.06:rem:: Ames, IA 50010, USA #:C.psitt.06:rem:title:Direct Submission #:C.psitt.06:rem:KEYWORDS:. #:C.psitt.06:rem:GenBank ACCESSION:U68453 #:C.psitt.07:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.07:name:Chlamydia psittaci. #:C.psitt.07:subsp: #:C.psitt.07:strain: #:C.psitt.07:atcc: #:C.psitt.07:acs:U68454 #:C.psitt.07:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.07:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.07:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.07:who: #:C.psitt.07:date:18-SEP-1997 #:C.psitt.07:rem:ref:1 (bases 1 to 1283) #:C.psitt.07:rem:ref:2 (bases 1 to 1283) #:C.psitt.07:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.07:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.07:rem:: Ames, IA 50010, USA #:C.psitt.07:rem:title:Direct Submission #:C.psitt.07:rem:KEYWORDS:. #:C.psitt.07:rem:GenBank ACCESSION:U68454 #:C.psitt.07:rem:Epizootic avian isolate from an outbreak of #:C.psitt.07:rem:meningopneumonitis in humans in the 1930's; for the MOMP gene #:C.psitt.07:rem:of #:C.psitt.07:rem:this strain see: Zhang, Y. -X. et al. Cloning and sequence #:C.psitt.07:rem:analysis #:C.psitt.07:rem:of the major outer membrane protein genes of two Chlamydia #:C.psitt.07:rem:psittaci #:C.psitt.07:rem:strains. Infect. Immun. 57:1621-1625 (1989). #:C.psitt.08:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.08:name:Chlamydia psittaci. #:C.psitt.08:subsp: #:C.psitt.08:strain: #:C.psitt.08:atcc: #:C.psitt.08:acs:U68455 #:C.psitt.08:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.08:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.08:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.08:who: #:C.psitt.08:date:18-SEP-1997 #:C.psitt.08:rem:ref:1 (bases 1 to 1284) #:C.psitt.08:rem:ref:2 (bases 1 to 1284) #:C.psitt.08:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.08:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.08:rem:: Ames, IA 50010, USA #:C.psitt.08:rem:title:Direct Submission #:C.psitt.08:rem:KEYWORDS:. #:C.psitt.08:rem:GenBank ACCESSION:U68455 #:C.psitt.09:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.09:name:Chlamydia psittaci. #:C.psitt.09:subsp: #:C.psitt.09:strain: #:C.psitt.09:atcc: #:C.psitt.09:acs:U68456 #:C.psitt.09:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.09:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.09:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.09:who: #:C.psitt.09:date:18-SEP-1997 #:C.psitt.09:rem:ref:1 (bases 1 to 1284) #:C.psitt.09:rem:ref:2 (bases 1 to 1284) #:C.psitt.09:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.09:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.09:rem:: Ames, IA 50010, USA #:C.psitt.09:rem:title:Direct Submission #:C.psitt.09:rem:KEYWORDS:. #:C.psitt.09:rem:GenBank ACCESSION:U68456 #:C.psitt.10:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.10:name:Chlamydia psittaci. #:C.psitt.10:subsp: #:C.psitt.10:strain: #:C.psitt.10:atcc: #:C.psitt.10:acs:U68457 #:C.psitt.10:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.10:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.10:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.10:who: #:C.psitt.10:date:18-SEP-1997 #:C.psitt.10:rem:ref:1 (bases 1 to 1285) #:C.psitt.10:rem:ref:2 (bases 1 to 1285) #:C.psitt.10:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.10:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.10:rem:: Ames, IA 50010, USA #:C.psitt.10:rem:title:Direct Submission #:C.psitt.10:rem:KEYWORDS:. #:C.psitt.10:rem:GenBank ACCESSION:U68457 #:C.psitt.11:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.11:name:Chlamydia psittaci. #:C.psitt.11:subsp: #:C.psitt.11:strain: #:C.psitt.11:atcc: #:C.psitt.11:acs:U68458 #:C.psitt.11:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.11:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.11:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.11:who: #:C.psitt.11:date:18-SEP-1997 #:C.psitt.11:rem:ref:1 (bases 1 to 1285) #:C.psitt.11:rem:ref:2 (bases 1 to 1285) #:C.psitt.11:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.11:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.11:rem:: Ames, IA 50010, USA #:C.psitt.11:rem:title:Direct Submission #:C.psitt.11:rem:KEYWORDS:. #:C.psitt.11:rem:GenBank ACCESSION:U68458 #:C.psitt.12:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.12:name:Chlamydia psittaci. #:C.psitt.12:subsp: #:C.psitt.12:strain: #:C.psitt.12:atcc: #:C.psitt.12:acs:U68459 #:C.psitt.12:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.12:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.12:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.12:who: #:C.psitt.12:date:18-SEP-1997 #:C.psitt.12:rem:ref:1 (bases 1 to 1285) #:C.psitt.12:rem:ref:2 (bases 1 to 1285) #:C.psitt.12:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.12:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.12:rem:: Ames, IA 50010, USA #:C.psitt.12:rem:title:Direct Submission #:C.psitt.12:rem:KEYWORDS:. #:C.psitt.12:rem:GenBank ACCESSION:U68459 #:C.psitt.14:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.14:name:Chlamydia psittaci. #:C.psitt.14:subsp: #:C.psitt.14:strain: #:C.psitt.14:atcc: #:C.psitt.14:acs:U68445 #:C.psitt.14:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.14:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.14:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.14:who: #:C.psitt.14:date:18-SEP-1997 #:C.psitt.14:rem:ref:1 (bases 1 to 1282) #:C.psitt.14:rem:ref:2 (bases 1 to 1282) #:C.psitt.14:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.14:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.14:rem:: Ames, IA 50010, USA #:C.psitt.14:rem:title:Direct Submission #:C.psitt.14:rem:KEYWORDS:. #:C.psitt.14:rem:GenBank ACCESSION:U68445 #:C.psitt.15:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.15:name:Chlamydia psittaci. #:C.psitt.15:subsp: #:C.psitt.15:strain: #:C.psitt.15:atcc: #:C.psitt.15:acs:U68446 #:C.psitt.15:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.15:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.15:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.15:who: #:C.psitt.15:date:18-SEP-1997 #:C.psitt.15:rem:ref:1 (bases 1 to 1282) #:C.psitt.15:rem:ref:2 (bases 1 to 1282) #:C.psitt.15:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.15:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.15:rem:: Ames, IA 50010, USA #:C.psitt.15:rem:title:Direct Submission #:C.psitt.15:rem:KEYWORDS:. #:C.psitt.15:rem:GenBank ACCESSION:U68446 #:C.psitt.16:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.16:name:Chlamydia psittaci. #:C.psitt.16:subsp: #:C.psitt.16:strain: #:C.psitt.16:atcc: #:C.psitt.16:acs:U68444 #:C.psitt.16:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.16:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.16:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.16:who: #:C.psitt.16:date:18-SEP-1997 #:C.psitt.16:rem:ref:1 (bases 1 to 1282) #:C.psitt.16:rem:ref:2 (bases 1 to 1282) #:C.psitt.16:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.16:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.16:rem:: Ames, IA 50010, USA #:C.psitt.16:rem:title:Direct Submission #:C.psitt.16:rem:KEYWORDS:. #:C.psitt.16:rem:GenBank ACCESSION:U68444 #:C.psitt.17:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.17:name:Chlamydia psittaci. #:C.psitt.17:subsp: #:C.psitt.17:strain: #:C.psitt.17:atcc: #:C.psitt.17:acs:U68448 #:C.psitt.17:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.17:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.17:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.17:who: #:C.psitt.17:date:18-SEP-1997 #:C.psitt.17:rem:ref:1 (bases 1 to 1283) #:C.psitt.17:rem:ref:2 (bases 1 to 1283) #:C.psitt.17:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.17:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.17:rem:: Ames, IA 50010, USA #:C.psitt.17:rem:title:Direct Submission #:C.psitt.17:rem:KEYWORDS:. #:C.psitt.17:rem:GenBank ACCESSION:U68448 #:C.psitt.18:title:gene are phylogenetic markers for Chlamydia spp #:C.psitt.18:name:Chlamydia psittaci. #:C.psitt.18:subsp: #:C.psitt.18:strain: #:C.psitt.18:atcc: #:C.psitt.18:acs:U68449 #:C.psitt.18:auth:Everett,K.D. and Andersen,A.A. #:C.psitt.18:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:C.psitt.18:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:C.psitt.18:who: #:C.psitt.18:date:18-SEP-1997 #:C.psitt.18:rem:ref:1 (bases 1 to 1284) #:C.psitt.18:rem:ref:2 (bases 1 to 1284) #:C.psitt.18:rem:auth:Everett,K.D.E. and Andersen,A.A. #:C.psitt.18:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:C.psitt.18:rem:: Ames, IA 50010, USA #:C.psitt.18:rem:title:Direct Submission #:C.psitt.18:rem:KEYWORDS:. #:C.psitt.18:rem:GenBank ACCESSION:U68449 #:Simkan.ZV1:title:gene are phylogenetic markers for Chlamydia spp #:Simkan.ZV1:name:Simkania sp. ZV1. #:Simkan.ZV1:subsp: #:Simkan.ZV1:strain: #:Simkan.ZV1:atcc: #:Simkan.ZV1:acs:U68460 #:Simkan.ZV1:auth:Everett,K.D. and Andersen,A.A. #:Simkan.ZV1:title:The ribosomal intergenic spacer and domain I of the 23S rRNA #:Simkan.ZV1:jour:Int. J. Syst. Bacteriol. 47 (2), 461-473 (1997) #:Simkan.ZV1:who: #:Simkan.ZV1:date:18-SEP-1997 #:Simkan.ZV1:rem:ref:1 (bases 1 to 1351) #:Simkan.ZV1:rem:ref:2 (bases 1 to 1351) #:Simkan.ZV1:rem:auth:Everett,K.D.E. and Andersen,A.A. #:Simkan.ZV1:rem:jour:Submitted (29-AUG-1996) USDA-ARS-NADC, 2300 Dayton Avenue, #:Simkan.ZV1:rem:: Ames, IA 50010, USA #:Simkan.ZV1:rem:title:Direct Submission #:Simkan.ZV1:rem:KEYWORDS:. #:Simkan.ZV1:rem:GenBank ACCESSION:U68460 #:Pir.marina:name:Pirellula marina #:Pir.marina:subsp: #:Pir.marina:strain: #:Pir.marina:atcc:? #:Pir.marina:acs:X07408 #:Pir.marina:auth: #:Pir.marina:title: #:Pir.marina:jour: #:Pir.marina:who:published #:Pir.marina:date:Sat Jul 9 17:56:12 1988 #:Pir.marina:rem:published:Liesack, Hopfl, Stackebrandt NAR 16:5194 (1988) #:CYANOBACTE:name: #:CYANOBACTE:subsp: #:CYANOBACTE:strain: #:CYANOBACTE:atcc: #:CYANOBACTE:acs:DIVIDER #:CYANOBACTE:auth: #:CYANOBACTE:title: #:CYANOBACTE:jour: #:CYANOBACTE:who:Robin Gutell,MCDB-256,28595,7868901 #:CYANOBACTE:date:Fri Dec 17 13:22:20 1993 #:Syn.PCC.1:name:Synechococcus PCC6301 #:Syn.PCC.1:subsp:was Anacystis nidulans #:Syn.PCC.1:strain: #:Syn.PCC.1:atcc: #:Syn.PCC.1:acs:X00512 #:Syn.PCC.1:auth: #:Syn.PCC.1:title: #:Syn.PCC.1:jour: #:Syn.PCC.1:who: #:Syn.PCC.1:date: #:Syn.PCC.1:rem:LOCUS ANIRGG 3282 bp ds-DNA BCT 01-AUG-1985 #:Syn.PCC.1:rem:DEFINITION A. nidulans 23S rRNA gene, complete. #:Syn.PCC.1:rem:ACCESSION X00512 #:Syn.PCC.1:rem:KEYWORDS 23S ribosomal RNA; 5S ribosomal RNA; ribosomal RNA; transfer RNA; #:Syn.PCC.1:rem: transfer RNA-Ala. #:Syn.PCC.1:rem:SOURCE A. nidulans DNA. #:Syn.PCC.1:rem: ORGANISM Anacystis nidulans #:Syn.PCC.1:rem: Prokaryota; Bacteria; Gracilicutes; Oxyphotobacteria; #:Syn.PCC.1:rem: Cyanobacteria. #:Syn.PCC.1:rem:REFERENCE 1 (bases 1 to 3282) #:Syn.PCC.1:rem: AUTHORS Douglas,S.E. and Doolittle,W.F. #:Syn.PCC.1:rem: TITLE Complete nucleotide sequence of the 23S rRNA gene of the #:Syn.PCC.1:rem: Cyanobacterium, Anacystis nidulans #:Syn.PCC.1:rem: JOURNAL Nucleic Acids Res. 12, 3373-3386 (1984) #:Syn.PCC.1:rem: STANDARD full staff_review #:Syn.PCC.1:rem:FEATURES Location/Qualifiers #:Syn.PCC.1:rem: tRNA <1..43 #:Syn.PCC.1:rem: /note="Ala-tRNA" #:Syn.PCC.1:rem: rRNA 251..3126 #:Syn.PCC.1:rem: /note="23S rRNA" #:Syn.PCC.1:rem: rRNA 3196..>3282 #:Syn.PCC.1:rem: /note="5S rRNA" #:Syn.PCC.1:rem:BASE COUNT 893 a 744 c 1002 g 643 t #:Syn.PCC.1:rem:ORIGIN 25 bp upstream of TaqI site. #:Syn.PCC.2:name:Synechococcus PCC6301 #:Syn.PCC.2:subsp:was Anacystis nidulans #:Syn.PCC.2:strain: #:Syn.PCC.2:atcc: #:Syn.PCC.2:acs:X00343 #:Syn.PCC.2:auth:Kumano,M., Tomioka,N. and Sugiura,M. #:Syn.PCC.2:title: #:Syn.PCC.2:jour: #:Syn.PCC.2:who: #:Syn.PCC.2:date: #:Syn.PCC.2:rem:LOCUS ANIRGGX 3326 bp ds-DNA BCT 03-SEP-1985 #:Syn.PCC.2:rem:DEFINITION A. nidulans 23S and 5S rRNA genes, complete. #:Syn.PCC.2:rem:ACCESSION X00343 #:Syn.PCC.2:rem:KEYWORDS 23S ribosomal RNA; 5S ribosomal RNA; ribosomal RNA. #:Syn.PCC.2:rem:SOURCE A. nidulans DNA, clone pAN4. #:Syn.PCC.2:rem: ORGANISM Anacystis nidulans #:Syn.PCC.2:rem: Prokaryota; Bacteria; Gracilicutes; Oxyphotobacteria; #:Syn.PCC.2:rem: Cyanobacteria. #:Syn.PCC.2:rem:REFERENCE 1 (bases 1 to 2991) #:Syn.PCC.2:rem: AUTHORS Kumano,M., Tomioka,N. and Sugiura,M. #:Syn.PCC.2:rem: TITLE The complete nucleotide sequence of a 23S rRNA gene from a #:Syn.PCC.2:rem: blue-green alga, Anacystis nidulans #:Syn.PCC.2:rem: JOURNAL Gene 24, 219-225 (1983) #:Syn.PCC.2:rem: STANDARD full staff_review #:Syn.PCC.2:rem:REFERENCE 2 (bases 2992 to 3326) #:Syn.PCC.2:rem: AUTHORS Douglas,S.E. and Doolittle,W.F. #:Syn.PCC.2:rem: TITLE Nucleotide sequence of the 5S rRNA gene and flanking regions in the #:Syn.PCC.2:rem: cyanobacterium, Anacystis nidulans #:Syn.PCC.2:rem: JOURNAL FEBS Lett. 166, 307-310 (1984) #:Syn.PCC.2:rem: STANDARD full staff_review #:Syn.PCC.2:rem:COMMENT Data [FEBS Lett. 166, 307-310 (1984)] kindly reviewed (04-MAY-1984) #:Syn.PCC.2:rem: by W.F. Doolittle. #:Syn.PCC.2:rem: EMBL features not translated to GenBank features: #:Syn.PCC.2:rem: key from to description #:Syn.PCC.2:rem: SITE 2961 3030 spacer region #:Syn.PCC.2:rem: SITE 3166 3207 stem-loop structure #:Syn.PCC.2:rem: typical for rho-independent #:Syn.PCC.2:rem: termination signals #:Syn.PCC.2:rem: SITE 3244 3298 stem-loop structure #:Syn.PCC.2:rem:FEATURES Location/Qualifiers #:Syn.PCC.2:rem: rRNA 91..2959 #:Syn.PCC.2:rem: /note="23S rRNA" #:Syn.PCC.2:rem: rRNA 3029..3148 #:Syn.PCC.2:rem: /note="5S rRNA" #:Syn.PCC.2:rem:BASE COUNT 895 a 769 c 1005 g 657 t #:Syn.PCC.2:rem:ORIGIN 53 bp upstream of HinfI site. #:Synec.6803:name:Synechocystis PCC6803 #:Synec.6803:subsp:slr0388 genes #:Synec.6803:strain: #:Synec.6803:atcc: #:Synec.6803:acs:D64000 #:Synec.6803:auth: #:Synec.6803:title: #:Synec.6803:jour: #:Synec.6803:who: #:Synec.6803:date: #:Synec.6803:rem:LOCUS SYCSLRB 146271 bp DNA BCT 21-NOV-1995 #:Synec.6803:rem:DEFINITION Synechocystis sp. slr0388 genes. #:Synec.6803:rem:ACCESSION D64000 #:Synec.6803:rem:NID g1001484 #:Synec.6803:rem:KEYWORDS 16S rRNA; 23S rRNA; 5S rRNA; #:Synec.6803:rem: carboxyl-terminal processing protease; cytochrome b6; #:Synec.6803:rem: cytochrome b6-f complex subunit 4; ferredoxin; #:Synec.6803:rem: glucose transport protein; hypothetical protein; #:Synec.6803:rem: plastocyanin precursor; #:Synec.6803:rem: ribulose bisphosphate carboxylase large subunit; #:Synec.6803:rem: ribulose bisphosphate carboxylase small subunit; tRNA-Ala; #:Synec.6803:rem: tRNA-Gly; tRNA-Ile; tRNA-Ser. #:Synec.6803:rem:SOURCE Synechocystis sp. (strain PCC6803, ) DNA. #:Synec.6803:rem: ORGANISM Synechocystis sp. #:Synec.6803:rem: Eubacteria; Cyanobacteria; Chroococcales; Synechocystis. #:Synec.6803:rem:REFERENCE 1 (bases 1 to 146271) #:Synec.6803:rem: AUTHORS Kaneko,T., Tanaka,A., Sato,S., Kotani,H., Sazuka,T., Miyajima,N., #:Synec.6803:rem: Sugiura,M. and Tabata,S. #:Synec.6803:rem: TITLE Sequence analysis of the genome of the unicellular cyanobacterium #:Synec.6803:rem: Synechocystis sp. strain PCC6803. I. sequence features in the 1Mb #:Synec.6803:rem: region from map positions 64% to 92% of the genome #:Synec.6803:rem: JOURNAL DNA Res. 2, 153-166 (1995) #:Synec.6803:rem:COMMENT #:Synec.6803:rem: Submitted (30-Aug-1995) to DDBJ by: #:Synec.6803:rem: Satoshi Tabata #:Synec.6803:rem: Dept. of Gene Structure 2 #:Synec.6803:rem: Kazusa DNA Research Institute #:Synec.6803:rem: 1532-3, Yanauchino #:Synec.6803:rem: Kisarazu, Chiba 292 #:Synec.6803:rem: Japan #:Synec.6803:rem: Phone: 0438-52-3933 #:Synec.6803:rem: Email: tabata@kazusa.or.jp #:Synec.6803:rem: Fax: 0438-52-3934. #:Synec.6803:rem: NCBI gi: 1001484 #:Synec.6803:rem:FEATURES Location/Qualifiers #:Synec.6803:rem: source 1..146271 #:Synec.6803:rem: /organism="Synechocystis sp." #:Synec.6803:rem: /strain="PCC6803" #:Synec.6803:rem: /sequenced_mol="DNA" #:Synec.6803:rem: rRNA complement(55920..56038) #:Synec.6803:rem: /product="5S rRNA" #:Synec.6803:rem: rRNA complement(56111..58993) #:Synec.6803:rem: /product="23S rRNA" #:Synec.6803:rem: tRNA complement(59243..59316) #:Synec.6803:rem: /product="tRNA-Ile" #:Synec.6803:rem: rRNA complement(59459..60947) #:Synec.6803:rem: /product="16S rRNA" #:Synec.6803:rem:BASE COUNT 37781 a 34838 c 34907 g 38745 t #:Synec.6803:rem:ORIGIN #:F.succinog:jour:Submitted (25-APR-1997) to the DDBJ/EMBL/GenBank databases. #:F.succinog:jour:Kiyoshi Tajima, STAFF Institute, Rumen Microbiology Research #:F.succinog:jour:Team; 446-1 Ippaizuka, Kamiyokoba, Tsukuba, Ibaraki 305, Japan #:F.succinog:jour:(E-mail:tajima@gene.staff.or.jp, Tel:+81-298-38-2196, Fax #:F.succinog:name:Fibrobacter succinogenes. #:F.succinog:subsp: #:F.succinog:strain: #:F.succinog:atcc: #:F.succinog:acs:AB003380 #:F.succinog:auth:Tajima,K. #:F.succinog:title:Direct Submission #:F.succinog:jour::+81-298-38-2337) #:F.succinog:who: #:F.succinog:date:01-MAY-1997 #:F.succinog:rem:ref:1 (bases 1 to 2573) #:F.succinog:rem:ref:2 (sites) #:F.succinog:rem:auth:Tajima,K., Nagamine,T., Aminov,R., Ogata,K., Sugiura,M. #:F.succinog:rem:: and Benno,Y. #:F.succinog:rem:jour:Unpublished (1997) #:F.succinog:rem:title:Phylogenetic diversity of rumen bacteria #:F.succinog:rem:KEYWORDS:23S ribosomal RNA. #:F.succinog:rem:GenBank ACCESSION:AB0033 0 #:SPIROCHETE:name: #:SPIROCHETE:subsp: #:SPIROCHETE:strain: #:SPIROCHETE:atcc: #:SPIROCHETE:acs:DIVIDER #:SPIROCHETE:auth: #:SPIROCHETE:title: #:SPIROCHETE:jour: #:SPIROCHETE:who:Robin Gutell,MCDB-256,28595,7868901 #:SPIROCHETE:date:Fri Dec 17 13:23:26 1993 #:Bra.hyodys:title:Specific detection of Serpulina hyodysenteriae and pathogenic #:Bra.hyodys:auth:Leser,T.D., Miller,K., Jensen,T.K., Jorsal,S.E. and Meyling,A #:Bra.hyodys:title:weakly beta-haemolytic intestinal spirochetes by polymerase #:Bra.hyodys:name:Brachyspira hyodysenteriae. #:Bra.hyodys:subsp: #:Bra.hyodys:strain: #:Bra.hyodys:atcc: #:Bra.hyodys:acs:U72699 #:Bra.hyodys:auth:. #:Bra.hyodys:title:chain reaction targeting 23S rDNA #:Bra.hyodys:jour:Unpublished #:Bra.hyodys:who: #:Bra.hyodys:date:02-APR-1997 #:Bra.hyodys:rem:ref:1 (bases 1 to 2465) #:Bra.hyodys:rem:ref:2 (bases 1 to 2465) #:Bra.hyodys:rem:auth:Leser,T.D., Miller,K., Jensen,T.K., Jorsal,S.E. and #:Bra.hyodys:rem:: Meyling,A. #:Bra.hyodys:rem:jour:Submitted (27-SEP-1996) Dept. Microbiology, Danish #:Bra.hyodys:rem:: Veterinary Laboratory, Bulowsvej 27, Copenhagen V DK-1790, #:Bra.hyodys:rem:: Denmark #:Bra.hyodys:rem:title:Direct Submission #:Bra.hyodys:rem:KEYWORDS:. #:Bra.hyodys:rem:GenBank ACCESSION:U72699 #:Bra.inno.1:title:weakly beta-haemolytic intestinal spirochetes by polymerase #:Bra.inno.1:auth:. #:Bra.inno.1:title:chain reaction targeting 23S rDNA #:Bra.inno.1:name:Brachyspira innocens #:Bra.inno.1:subsp: #:Bra.inno.1:strain: #:Bra.inno.1:atcc: #:Bra.inno.1:acs:U72700 #:Bra.inno.1:auth:Leser,T.D., Moller,K., Jensen,T.K., Jorsal,S.E. and Meyling,A #:Bra.inno.1:title:Specific detection of Serpulina hyodysenteriae and pathogenic #:Bra.inno.1:jour:Unpublished #:Bra.inno.1:who: #:Bra.inno.1:date:02-APR-1997 #:Bra.inno.1:rem:ref:1 (bases 1 to 2465) #:Bra.inno.1:rem:ref:2 (bases 1 to 2465) #:Bra.inno.1:rem:auth:Leser,T.D., Miller,K., Jensen,T.K., Jorsal,S.E. and #:Bra.inno.1:rem:: Meyling,A. #:Bra.inno.1:rem:jour:Submitted (27-SEP-1996) Dept. Microbiology, Danish #:Bra.inno.1:rem:: Veterinary Laboratory, Bulowsvej 27, Copenhagen V DK-1790, #:Bra.inno.1:rem:: Denmark #:Bra.inno.1:rem:title:Direct Submission #:Bra.inno.1:rem:KEYWORDS:. #:Bra.inno.1:rem:GenBank ACCESSION:U72700 #:Bra.inno.2:title:weakly beta-haemolytic intestinal spirochetes by polymerase #:Bra.inno.2:auth:Leser,T.D., Moller,K., Jensen,T.K., Jorsal,S.E. and Meyling,A #:Bra.inno.2:title:chain reaction targeting 23S rDNA #:Bra.inno.2:name:Brachyspira innocens #:Bra.inno.2:subsp: #:Bra.inno.2:strain: #:Bra.inno.2:atcc: #:Bra.inno.2:acs:U72701 #:Bra.inno.2:auth:. #:Bra.inno.2:title:Specific detection of Serpulina hyodysenteriae and pathogenic #:Bra.inno.2:jour:Unpublished #:Bra.inno.2:who: #:Bra.inno.2:date:02-APR-1997 #:Bra.inno.2:rem:ref:1 (bases 1 to 2464) #:Bra.inno.2:rem:ref:2 (bases 1 to 2464) #:Bra.inno.2:rem:auth:Leser,T.D., Miller,K., Jensen,T.K., Jorsal,S.E. and #:Bra.inno.2:rem:: Meyling,A. #:Bra.inno.2:rem:jour:Submitted (27-SEP-1996) Dept. Microbiology, Danish #:Bra.inno.2:rem:: Veterinary Laboratory, Bulowsvej 27, Copenhagen V DK-1790, #:Bra.inno.2:rem:: Denmark #:Bra.inno.2:rem:title:Direct Submission #:Bra.inno.2:rem:KEYWORDS:. #:Bra.inno.2:rem:GenBank ACCESSION:U72701 #:Bra.inno.3:title:chain reaction targeting 23S rDNA #:Bra.inno.3:auth:. #:Bra.inno.3:title:Specific detection of Serpulina hyodysenteriae and pathogenic #:Bra.inno.3:name:Brachyspira innocens #:Bra.inno.3:subsp: #:Bra.inno.3:strain: #:Bra.inno.3:atcc: #:Bra.inno.3:acs:U72702 #:Bra.inno.3:auth:Leser,T.D., Moller,K., Jensen,T.K., Jorsal,S.E. and Meyling,A #:Bra.inno.3:title:weakly beta-haemolytic intestinal spirochetes by polymerase #:Bra.inno.3:jour:Unpublished #:Bra.inno.3:who: #:Bra.inno.3:date:02-APR-1997 #:Bra.inno.3:rem:ref:1 (bases 1 to 2465) #:Bra.inno.3:rem:ref:2 (bases 1 to 2465) #:Bra.inno.3:rem:auth:Leser,T.D., Miller,K., Jensen,T.K., Jorsal,S.E. and #:Bra.inno.3:rem:: Meyling,A. #:Bra.inno.3:rem:jour:Submitted (27-SEP-1996) Dept. Microbiology, Danish #:Bra.inno.3:rem:: Veterinary Laboratory, Bulowsvej 27, Copenhagen V DK-1790, #:Bra.inno.3:rem:: Denmark #:Bra.inno.3:rem:title:Direct Submission #:Bra.inno.3:rem:KEYWORDS:. #:Bra.inno.3:rem:GenBank ACCESSION:U72702 #:Bra.pilosi:title:chain reaction #:Bra.pilosi:auth:Leser,T.D., Moller,K., Jensen,T.K., Jorsal,S.E. and Meyling,A #:Bra.pilosi:title:Specific detection of Serpulina hyodysenteriae and pathogenic #:Bra.pilosi:name:Brachyspira pilosicoli #:Bra.pilosi:subsp: #:Bra.pilosi:strain: #:Bra.pilosi:atcc: #:Bra.pilosi:acs:U72703 #:Bra.pilosi:auth:. #:Bra.pilosi:title:weakly beta-haemolytic intestinal spirochetes by polymerase #:Bra.pilosi:jour:Unpublished #:Bra.pilosi:who: #:Bra.pilosi:date:02-APR-1997 #:Bra.pilosi:rem:ref:1 (bases 1 to 2464) #:Bra.pilosi:rem:ref:2 (bases 1 to 2464) #:Bra.pilosi:rem:auth:Leser,T.D., Miller,K., Jensen,T.K., Jorsal,S.E. and #:Bra.pilosi:rem:: Meyling,A. #:Bra.pilosi:rem:jour:Submitted (27-SEP-1996) Dept. Microbiology, Danish #:Bra.pilosi:rem:: Veterinary Laboratory, Bulowsvej 27, Copenhagen V DK-1790, #:Bra.pilosi:rem:: Denmark #:Bra.pilosi:rem:title:Direct Submission #:Bra.pilosi:rem:KEYWORDS:. #:Bra.pilosi:rem:GenBank ACCESSION:U72703 #:T.pallid.A:auth:Utterback,T., McDonald,L., Artiach,P., Bowman,C., Cotton,M.D., #:T.pallid.A:auth:Fujii,C., Garland,S., Hatch,B., Horst,K., Roberts,K., Watthey #:T.pallid.A:auth:,L., Weidman,J., Smith,H.O. and Venter,J.C. #:T.pallid.A:auth:Fraser,C.M., Norris,S.J., Weinstock,G.M., White,O., Sutton,G.G #:T.pallid.A:auth:., Dodson,R., Gwinn,M., Hickey,E.K., Clayton,R., Ketchum,K.A., #:T.pallid.A:auth:Sodergren,E., Hardham,J.M., McLeod,M.P., Salzberg,S., Peterson #:T.pallid.A:title:Complete Genome Sequence of Treponema pallidum, the Syphilis #:T.pallid.A:name:Treponema pallidum. #:T.pallid.A:subsp: #:T.pallid.A:strain: #:T.pallid.A:atcc: #:T.pallid.A:acs:AE001204 #:T.pallid.A:auth:,J., Khalak,H., Richardson,D., Howell,J.K., Chidambaram,M., #:T.pallid.A:title:Spirochete #:T.pallid.A:jour:Science 281, 375-388 (1998) #:T.pallid.A:who: #:T.pallid.A:date:16-JUL-1998 #:T.pallid.A:rem:ref:1 (bases 1 to 12774) #:T.pallid.A:rem:ref:2 (bases 1 to 12774) #:T.pallid.A:rem:auth:Fraser,C.M., Norris,S.J., Weinstock,G.M., White,O., #:T.pallid.A:rem:: Sutton,G.G., Dodson,R., Gwinn,M., Hickey,E.K., Clayton,R., #:T.pallid.A:rem:: Ketchum,K.A., Sodergren,E., Hardham,J.M., McLeod,M.P., #:T.pallid.A:rem:: Salzberg,S., Peterson,J., Khalak,H., Richardson,D., Howell, #:T.pallid.A:rem:: J.K., Chidambaram,M., Utterback,T., McDonald,L., Artiach,P., #:T.pallid.A:rem:: Bowman,C., Cotton,M.D., Fujii,C., Garland,S., Hatch,B., #:T.pallid.A:rem:: Horst,K., Roberts,K., Watthey,L., Weidman,J., Smith,H.O. #:T.pallid.A:rem:: and Venter,J.C. #:T.pallid.A:rem:jour:Submitted (06-MAR-1998) The Institute for Genomic #:T.pallid.A:rem:: Research, 9712 Medical Center Dr, Rockville, MD 20850, USA #:T.pallid.A:rem:title:Direct Submission #:T.pallid.A:rem:KEYWORDS:. #:T.pallid.A:rem:GenBank ACCESSION:AE0012 4 AE00 520 #:T.pallid.B:auth:Utterback,T., McDonald,L., Artiach,P., Bowman,C., Cotton,M.D., #:T.pallid.B:auth:Fujii,C., Garland,S., Hatch,B., Horst,K., Roberts,K., Watthey #:T.pallid.B:auth:,L., Weidman,J., Smith,H.O. and Venter,J.C. #:T.pallid.B:auth:Fraser,C.M., Norris,S.J., Weinstock,G.M., White,O., Sutton,G.G #:T.pallid.B:auth:., Dodson,R., Gwinn,M., Hickey,E.K., Clayton,R., Ketchum,K.A., #:T.pallid.B:auth:Sodergren,E., Hardham,J.M., McLeod,M.P., Salzberg,S., Peterson #:T.pallid.B:title:Complete Genome Sequence of Treponema pallidum, the Syphilis #:T.pallid.B:name:Treponema pallidum. #:T.pallid.B:subsp: #:T.pallid.B:strain: #:T.pallid.B:atcc: #:T.pallid.B:acs:AE001208 #:T.pallid.B:auth:,J., Khalak,H., Richardson,D., Howell,J.K., Chidambaram,M., #:T.pallid.B:title:Spirochete #:T.pallid.B:jour:Science 281, 375-388 (1998) #:T.pallid.B:who: #:T.pallid.B:date:16-JUL-1998 #:T.pallid.B:rem:ref:1 (bases 1 to 12697) #:T.pallid.B:rem:ref:2 (bases 1 to 12697) #:T.pallid.B:rem:auth:Fraser,C.M., Norris,S.J., Weinstock,G.M., White,O., #:T.pallid.B:rem:: Sutton,G.G., Dodson,R., Gwinn,M., Hickey,E.K., Clayton,R., #:T.pallid.B:rem:: Ketchum,K.A., Sodergren,E., Hardham,J.M., McLeod,M.P., #:T.pallid.B:rem:: Salzberg,S., Peterson,J., Khalak,H., Richardson,D., Howell, #:T.pallid.B:rem:: J.K., Chidambaram,M., Utterback,T., McDonald,L., Artiach,P., #:T.pallid.B:rem:: Bowman,C., Cotton,M.D., Fujii,C., Garland,S., Hatch,B., #:T.pallid.B:rem:: Horst,K., Roberts,K., Watthey,L., Weidman,J., Smith,H.O. #:T.pallid.B:rem:: and Venter,J.C. #:T.pallid.B:rem:jour:Submitted (06-MAR-1998) The Institute for Genomic #:T.pallid.B:rem:: Research, 9712 Medical Center Dr, Rockville, MD 20850, USA #:T.pallid.B:rem:title:Direct Submission #:T.pallid.B:rem:KEYWORDS:. #:T.pallid.B:rem:GenBank ACCESSION:AE0012 8 AE00 520 #:B.burgdo.1:name:Borrelia burgdorferi #:B.burgdo.1:subsp: #:B.burgdo.1:strain: #:B.burgdo.1:atcc: #:B.burgdo.1:acs:M88330 #:B.burgdo.1:auth: #:B.burgdo.1:title: #:B.burgdo.1:jour: #:B.burgdo.1:who: #:B.burgdo.1:date: #:B.burgdo.1:rem:LOCUS BORRG23S 2926 bp ds-DNA BCT 23-SEP-1992 #:B.burgdo.1:rem:DEFINITION Borrelia burgdorferi 23S ribosomal RNA gene. #:B.burgdo.1:rem:ACCESSION M88330 #:B.burgdo.1:rem:KEYWORDS 23S ribosomal RNA. #:B.burgdo.1:rem:SOURCE Borrelia burgdorferi DNA. #:B.burgdo.1:rem: ORGANISM Borrelia burgdorferi #:B.burgdo.1:rem: Prokaryotae; Gracilicutes; Scotobacteria; Spirochetes; #:B.burgdo.1:rem: Spirochaetales; Spirochaetaceae. #:B.burgdo.1:rem:REFERENCE 1 (bases 1 to 2926) #:B.burgdo.1:rem: AUTHORS Schwartz,I., Gazumyan,A. and Schwartz,J.J. #:B.burgdo.1:rem: TITLE Sequence and Structure of the Ribosomal RNA Genes of Borrelia #:B.burgdo.1:rem: burgdorferi #:B.burgdo.1:rem: JOURNAL Unpublished (1992) #:B.burgdo.1:rem: STANDARD full staff_entry #:B.burgdo.1:rem:FEATURES Location/Qualifiers #:B.burgdo.1:rem: rRNA 1..2926 #:B.burgdo.1:rem: /product="23S ribosomal RNA" #:B.burgdo.1:rem: /gene="23S rRNA" #:B.burgdo.1:rem: /note="putative" #:B.burgdo.1:rem:BASE COUNT 910 a 492 c 804 g 720 t #:B.burgdo.1:rem:ORIGIN #:B.burgdo.2:name:Borrelia burgdorferi #:B.burgdo.2:subsp: #:B.burgdo.2:strain: #:B.burgdo.2:atcc: #:B.burgdo.2:acs:U03396 #:B.burgdo.2:auth: #:B.burgdo.2:title: #:B.burgdo.2:jour: #:B.burgdo.2:who: #:B.burgdo.2:date: #:B.burgdo.2:rem:LOCUS BBRNAOPR 11955 bp DNA BCT 12-NOV-1993 #:B.burgdo.2:rem:DEFINITION Borrelia burgdorferi B31 Ala-tRNA (alaT), Ile-tRNA (ileT), 16S #:B.burgdo.2:rem: rRNA, 23S rRNA (rrlA and rrlB), and 5S rRNA (rrfA and rrfB) genes, #:B.burgdo.2:rem: complete sequence. #:B.burgdo.2:rem:ACCESSION U03396 #:B.burgdo.2:rem:KEYWORDS . #:B.burgdo.2:rem:SOURCE Lyme disease spirochete #:B.burgdo.2:rem: ORGANISM Borrelia burgdorferi #:B.burgdo.2:rem: Eubacteria; Gracilicutes; Scotobacteria; The Spirochetes; #:B.burgdo.2:rem: Spirochaetales; Spirochaetaceae; Borrelia. #:B.burgdo.2:rem:REFERENCE 1 (bases 1 to 11955) #:B.burgdo.2:rem: AUTHORS Gazumyan,A., Schwartz,J.J., Liveris,D. and Schwartz,I. #:B.burgdo.2:rem: TITLE Sequence Analysis of the Ribosomal RNA Operon of the Lyme Disease #:B.burgdo.2:rem: Spirochete, Borrelia burgdorferi #:B.burgdo.2:rem: JOURNAL Unpublished #:B.burgdo.2:rem: STANDARD full automatic #:B.burgdo.2:rem:REFERENCE 2 (bases 1 to 11955) #:B.burgdo.2:rem: AUTHORS Schwartz,I. #:B.burgdo.2:rem: TITLE Direct Submission #:B.burgdo.2:rem: JOURNAL Submitted (10-NOV-1993) Schwartz I., New York Medical College, #:B.burgdo.2:rem: Dept. of Biochemistry and Molecular Biology, Valhalla, NY 10559, #:B.burgdo.2:rem: USA #:B.burgdo.2:rem: STANDARD full automatic #:B.burgdo.2:rem:FEATURES Location/Qualifiers #:B.burgdo.2:rem: rRNA 841..2377 #:B.burgdo.2:rem: /product="16S ribosomal RNA" #:B.burgdo.2:rem: tRNA 2549..2622 #:B.burgdo.2:rem: /product="Ala-tRNA" #:B.burgdo.2:rem: /gene="alaT" #:B.burgdo.2:rem: /anticodon=(pos:2583..2585,aa:Ala) #:B.burgdo.2:rem: tRNA complement(3262..3335) #:B.burgdo.2:rem: /product="Ile-tRNA" #:B.burgdo.2:rem: /gene="ileT" #:B.burgdo.2:rem: /anticodon=(pos:3299..3301,aa:Ile) #:B.burgdo.2:rem: rRNA 5430..8355 #:B.burgdo.2:rem: /product="23S ribosomal RNA" #:B.burgdo.2:rem: /gene="rrlA" #:B.burgdo.2:rem: rRNA 8378..8489 #:B.burgdo.2:rem: /product="5S ribosomal RNA" #:B.burgdo.2:rem: /evidence=EXPERIMENTAL #:B.burgdo.2:rem: /gene="rrfA" #:B.burgdo.2:rem: rRNA 8672..11597 #:B.burgdo.2:rem: /product="23S ribosomal RNA" #:B.burgdo.2:rem: /gene="rrlB" #:B.burgdo.2:rem: rRNA 11620..11731 #:B.burgdo.2:rem: /product="5S ribosomal RNA" #:B.burgdo.2:rem: /gene="rrfB" #:B.burgdo.2:rem: source 1..11955 #:B.burgdo.2:rem: /strain="B31" #:B.burgdo.2:rem: /organism="Borrelia burgdorferi" #:B.burgdo.2:rem:BASE COUNT 3836 a 1739 c 2835 g 3545 t #:B.burgdo.2:rem:ORIGIN #:B.burgdo.3:name:Borrelia burgdorferi #:B.burgdo.3:subsp: #:B.burgdo.3:strain: #:B.burgdo.3:atcc: #:B.burgdo.3:acs:X85745 #:B.burgdo.3:auth:Klima,R., Coglievina,M. and Bruschi,C.V. #:B.burgdo.3:title: #:B.burgdo.3:jour: #:B.burgdo.3:who: #:B.burgdo.3:date: #:B.burgdo.3:rem:LOCUS BB23S5S 2093 bp DNA BCT 30-JUN-1995 #:B.burgdo.3:rem:DEFINITION B.burgdorferi 23S rRNA, 5S rRNA and 23S rRNA genes. #:B.burgdo.3:rem:ACCESSION X85745 #:B.burgdo.3:rem:KEYWORDS 23S rRNA gene; 5S rRNA gene; spirochete. #:B.burgdo.3:rem:SOURCE Lyme disease spirochete. #:B.burgdo.3:rem: ORGANISM Borrelia burgdorferi #:B.burgdo.3:rem: Eubacteria; Spirochaetales; Spirochaetaceae; Borrelia. #:B.burgdo.3:rem:REFERENCE 1 (bases 1 to 2093) #:B.burgdo.3:rem: AUTHORS Klima,R., Coglievina,M. and Bruschi,C.V. #:B.burgdo.3:rem: TITLE Molecular diagnosis of Lyme disease Spirochete infections #:B.burgdo.3:rem: JOURNAL Unpublished #:B.burgdo.3:rem:REFERENCE 2 (bases 1 to 2093) #:B.burgdo.3:rem: AUTHORS Bruschi,C.V. #:B.burgdo.3:rem: TITLE Direct Submission #:B.burgdo.3:rem: JOURNAL Submitted (20-MAR-1995) to the EMBL/GenBank/DDBJ databases. C.V. #:B.burgdo.3:rem: Bruschi, Microbiology group, International Centre for Genetic #:B.burgdo.3:rem: Engineering and Biotechnology, Area Science Park, Padriciano 99, #:B.burgdo.3:rem: I-34012 Trieste, ITALY #:B.burgdo.3:rem:COMMENT #:B.burgdo.3:rem: Related sequence: U03396. #:B.burgdo.3:rem: NCBI gi: 886435 #:B.burgdo.3:rem:FEATURES Location/Qualifiers #:B.burgdo.3:rem: source 1..2093 #:B.burgdo.3:rem: /organism="Borrelia burgdorferi" #:B.burgdo.3:rem: /sub_species="sensu stricto" #:B.burgdo.3:rem: /strain="B31" #:B.burgdo.3:rem: /clone_lib="M13mp19" #:B.burgdo.3:rem: /map="between tmpC and gyr'BA" #:B.burgdo.3:rem: rRNA <1..1699 #:B.burgdo.3:rem: /gene="23S rRNA" #:B.burgdo.3:rem: rRNA 1748..1833 #:B.burgdo.3:rem: /gene="5S rRNA" #:B.burgdo.3:rem: rRNA 2016..2093 #:B.burgdo.3:rem: /gene="23S rRNA" #:B.burgdo.3:rem:BASE COUNT 632 a 342 c 553 g 566 t #:B.burgdo.3:rem:ORIGIN #:B.burgdo.4:auth:Salzberg,S., Hanson,M., van-Vugt,R., Palmer,N., Adams,M.D., #:B.burgdo.4:auth:Gocayne,J.D., Weidman,J., Utterback,T., Watthey,L., McDonald,L #:B.burgdo.4:auth:., Artiach,P., Bowman,C., Garland,S., Fujii,C., Cotton,M.D., #:B.burgdo.4:auth:Horst,K., Roberts,K., Hatch,B., Smith,H.O. and Venter,J.C. #:B.burgdo.4:auth:Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Clayton,R.A., #:B.burgdo.4:auth:Lathigra,R., White,O., Ketchum,K.A., Dodson,R., Hickey,E.K., #:B.burgdo.4:auth:Gwinn,M., Dougherty,B., Tomb,J.-F., Fleischmann,R.D., #:B.burgdo.4:title:Genomic sequence of a Lyme disease spirochaete, Borrelia #:B.burgdo.4:name:Borrelia burgdorferi. #:B.burgdo.4:subsp: #:B.burgdo.4:strain: #:B.burgdo.4:atcc: #:B.burgdo.4:acs:AE001147 #:B.burgdo.4:auth:Richardson,D., Peterson,J., Kerlavage,A.R., Quackenbush,J., #:B.burgdo.4:title:burgdorferi #:B.burgdo.4:jour:Nature 390 (6660), 580-586 (1997) #:B.burgdo.4:who: #:B.burgdo.4:date:15-DEC-1997 #:B.burgdo.4:rem:****(212..3145) #:B.burgdo.4:rem:ref:1 (bases 1 to 11172) #:B.burgdo.4:rem:ref:2 (bases 1 to 11172) #:B.burgdo.4:rem:auth:Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Clayton, #:B.burgdo.4:rem:: R.A., Lathigra,R., White,O., Ketchum,K.A., Dodson,R., #:B.burgdo.4:rem:: Hickey,E.K., Gwinn,M., Dougherty,B., Tomb,J.-F., #:B.burgdo.4:rem:: Fleischmann,R.D., Richardson,D., Peterson,J., Kerlavage,A.R. #:B.burgdo.4:rem:: , Quackenbush,J., Salzberg,S., Hanson,M., van-Vugt,R., #:B.burgdo.4:rem:: Palmer,N., Adams,M.D., Gocayne,J.D., Weidman,J., Utterback, #:B.burgdo.4:rem:: T., Watthey,L., McDonald,L., Artiach,P., Bowman,C., Garland, #:B.burgdo.4:rem:: S., Fujii,C., Cotton,M.D., Horst,K., Roberts,K., Hatch,B., #:B.burgdo.4:rem:: Smith,H.O. and Venter,J.C. #:B.burgdo.4:rem:jour:Submitted (12-DEC-1997) The Institute for Genomic #:B.burgdo.4:rem:: Research, 9712 Medical Center Dr, Rockville, MD 20850, USA #:B.burgdo.4:rem:title:Direct Submission #:B.burgdo.4:rem:KEYWORDS:. #:B.burgdo.4:rem:GenBank ACCESSION:AE0011 7 AE00 783 #:B.burgdo.5:auth:Horst,K., Roberts,K., Hatch,B., Smith,H.O. and Venter,J.C. #:B.burgdo.5:auth:Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Clayton,R.A., #:B.burgdo.5:auth:Lathigra,R., White,O., Ketchum,K.A., Dodson,R., Hickey,E.K., #:B.burgdo.5:auth:Gwinn,M., Dougherty,B., Tomb,J.-F., Fleischmann,R.D., #:B.burgdo.5:auth:Richardson,D., Peterson,J., Kerlavage,A.R., Quackenbush,J., #:B.burgdo.5:auth:Salzberg,S., Hanson,M., van-Vugt,R., Palmer,N., Adams,M.D., #:B.burgdo.5:auth:Gocayne,J.D., Weidman,J., Utterback,T., Watthey,L., McDonald,L #:B.burgdo.5:title:burgdorferi #:B.burgdo.5:name:Borrelia burgdorferi. #:B.burgdo.5:subsp: #:B.burgdo.5:strain: #:B.burgdo.5:atcc: #:B.burgdo.5:acs:AE001147 #:B.burgdo.5:auth:., Artiach,P., Bowman,C., Garland,S., Fujii,C., Cotton,M.D., #:B.burgdo.5:title:Genomic sequence of a Lyme disease spirochaete, Borrelia #:B.burgdo.5:jour:Nature 390 (6660), 580-586 (1997) #:B.burgdo.5:who: #:B.burgdo.5:date:15-DEC-1997 #:B.burgdo.5:rem:****(3468..6386) #:B.burgdo.5:rem:ref:1 (bases 1 to 11172) #:B.burgdo.5:rem:ref:2 (bases 1 to 11172) #:B.burgdo.5:rem:auth:Fraser,C.M., Casjens,S., Huang,W.M., Sutton,G.G., Clayton, #:B.burgdo.5:rem:: R.A., Lathigra,R., White,O., Ketchum,K.A., Dodson,R., #:B.burgdo.5:rem:: Hickey,E.K., Gwinn,M., Dougherty,B., Tomb,J.-F., #:B.burgdo.5:rem:: Fleischmann,R.D., Richardson,D., Peterson,J., Kerlavage,A.R. #:B.burgdo.5:rem:: , Quackenbush,J., Salzberg,S., Hanson,M., van-Vugt,R., #:B.burgdo.5:rem:: Palmer,N., Adams,M.D., Gocayne,J.D., Weidman,J., Utterback, #:B.burgdo.5:rem:: T., Watthey,L., McDonald,L., Artiach,P., Bowman,C., Garland, #:B.burgdo.5:rem:: S., Fujii,C., Cotton,M.D., Horst,K., Roberts,K., Hatch,B., #:B.burgdo.5:rem:: Smith,H.O. and Venter,J.C. #:B.burgdo.5:rem:jour:Submitted (12-DEC-1997) The Institute for Genomic #:B.burgdo.5:rem:: Research, 9712 Medical Center Dr, Rockville, MD 20850, USA #:B.burgdo.5:rem:title:Direct Submission #:B.burgdo.5:rem:KEYWORDS:. #:B.burgdo.5:rem:GenBank ACCESSION:AE0011 7 AE00 783 #:L.santaros:name:Leptospira santarosai #:L.santaros:subsp: #:L.santaros:strain: #:L.santaros:atcc: #:L.santaros:acs:L14265 #:L.santaros:auth: #:L.santaros:title: #:L.santaros:jour: #:L.santaros:who: #:L.santaros:date: #:L.santaros:rem:ID LSRGGC standard; DNA; PRO; 541 BP. #:L.santaros:rem:XX #:L.santaros:rem:AC L14265; #:L.santaros:rem:XX #:L.santaros:rem:DT 13-MAY-1993 (Rel. 35, Created) #:L.santaros:rem:DT 13-MAY-1993 (Rel. 35, Last updated, Version 1) #:L.santaros:rem:XX #:L.santaros:rem:DE Leptospira santarosai ORF within intervening sequence of 23S #:L.santaros:rem:DE ribosomal RNA gene. #:L.santaros:rem:XX #:L.santaros:rem:KW 23S ribosomal RNA; ribosomal RNA. #:L.santaros:rem:XX #:L.santaros:rem:OS Leptospira santarosai #:L.santaros:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes; #:L.santaros:rem:OC Spirochaetales; Leptospiraceae. #:L.santaros:rem:XX #:L.santaros:rem:RN [1] #:L.santaros:rem:RP 1-541 #:L.santaros:rem:RA Ralph D., McClelland M.; #:L.santaros:rem:RT "Intervening sequence with conserved open reading frame in #:L.santaros:rem:RT eubacterial 23S rRNA genes"; #:L.santaros:rem:RL Unpublished. #:L.santaros:rem:XX #:L.santaros:rem:FH Key Location/Qualifiers #:L.santaros:rem:FH #:L.santaros:rem:FT rRNA <1..5 #:L.santaros:rem:FT /product="23S ribosomal RNA" #:L.santaros:rem:FT /gene="23S rRNA" #:L.santaros:rem:FT misc_feature 6..478 #:L.santaros:rem:FT /note="intervening sequence (IVS) removed after #:L.santaros:rem:FT transcription, but 23S rRNA is not religated" #:L.santaros:rem:FT CDS 74..442 #:L.santaros:rem:FT /note="ORF" #:L.santaros:rem:FT /codon_start=1 #:L.santaros:rem:FT rRNA 479..>541 #:L.santaros:rem:FT /product="23S ribosomal RNA" #:L.santaros:rem:FT /gene="23S rRNA" #:L.santaros:rem:FT source 1..541 #:L.santaros:rem:FT /organism="Leptospira santarosai" #:L.santaros:rem:FT /strain="atlantae LT 81" #:L.santaros:rem:FT /sequenced_mol="DNA" #:L.santaros:rem:XX #:L.santaros:rem:SQ Sequence 541 BP; 168 A; 80 C; 128 G; 165 T; 0 other; #:L.borgpete:name:Leptospira borgpetersenii #:L.borgpete:subsp: #:L.borgpete:strain: #:L.borgpete:atcc: #:L.borgpete:acs:L14263 #:L.borgpete:auth: #:L.borgpete:title: #:L.borgpete:jour: #:L.borgpete:who: #:L.borgpete:date: #:L.borgpete:rem:ID LBRGGA standard; DNA; PRO; 1013 BP. #:L.borgpete:rem:XX #:L.borgpete:rem:AC L14263; #:L.borgpete:rem:XX #:L.borgpete:rem:DT 13-MAY-1993 (Rel. 35, Created) #:L.borgpete:rem:DT 13-MAY-1993 (Rel. 35, Last updated, Version 1) #:L.borgpete:rem:XX #:L.borgpete:rem:DE Leptospira borgpetersenii ORF within intervening sequence of 23S #:L.borgpete:rem:DE ribosomal RNA gene. #:L.borgpete:rem:XX #:L.borgpete:rem:KW 23S ribosomal RNA; ribosomal RNA. #:L.borgpete:rem:XX #:L.borgpete:rem:OS Leptospira borgpetersenii #:L.borgpete:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Spirochetes; #:L.borgpete:rem:OC Spirochaetales; Leptospiraceae. #:L.borgpete:rem:XX #:L.borgpete:rem:RN [1] #:L.borgpete:rem:RP 1-1013 #:L.borgpete:rem:RA Ralph D., McClelland M.; #:L.borgpete:rem:RT "Intervening sequence with conserved open reading frame in #:L.borgpete:rem:RT eubacterial 23S rRNA genes"; #:L.borgpete:rem:RL Unpublished. #:L.borgpete:rem:XX #:L.borgpete:rem:FH Key Location/Qualifiers #:L.borgpete:rem:FH #:L.borgpete:rem:FT rRNA <1..87 #:L.borgpete:rem:FT /product="23S ribosomal RNA" #:L.borgpete:rem:FT /gene="23S rRNA" #:L.borgpete:rem:FT misc_feature 88..776 #:L.borgpete:rem:FT /note="intervening sequence (IVS) removed after #:L.borgpete:rem:FT transcription, but 23S rRNA is not religated" #:L.borgpete:rem:FT CDS 179..544 #:L.borgpete:rem:FT /note="ORF" #:L.borgpete:rem:FT /codon_start=1 #:L.borgpete:rem:FT rRNA 777..>1013 #:L.borgpete:rem:FT /product="23S ribosomal RNA" #:L.borgpete:rem:FT /gene="23S rRNA" #:L.borgpete:rem:FT source 1..1013 #:L.borgpete:rem:FT /organism="Leptospira borgpetersenii" #:L.borgpete:rem:FT /strain="Hardjo bovis/Sponselee" #:L.borgpete:rem:FT /sequenced_mol="DNA" #:L.borgpete:rem:XX #:L.borgpete:rem:SQ Sequence 1013 BP; 317 A; 188 C; 264 G; 244 T; 0 other; #:L.interrog:name:Leptospira interrogans serovar canicola strain Moulton #:L.interrog:subsp: #:L.interrog:strain: #:L.interrog:atcc: #:L.interrog:acs:X14249 #:L.interrog:auth: #:L.interrog:title: #:L.interrog:jour:April 1989 #:L.interrog:who:entered:Robin Gutell #:L.interrog:date:April 1989 #:PURPLE.ALP:name: #:PURPLE.ALP:subsp: #:PURPLE.ALP:strain: #:PURPLE.ALP:atcc: #:PURPLE.ALP:acs:DIVIDER #:PURPLE.ALP:auth: #:PURPLE.ALP:title: #:PURPLE.ALP:jour: #:PURPLE.ALP:who:Robin Gutell,MCDB-256,28595,7868901 #:PURPLE.ALP:date:Fri Dec 17 13:16:34 1993 #:R.rubrum:name:Rhodospirillum rubrum. #:R.rubrum:subsp: #:R.rubrum:strain: #:R.rubrum:atcc: #:R.rubrum:acs:X87290 #:R.rubrum:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:R.rubrum:title:proteobacteria #:R.rubrum:jour:Unpublished #:R.rubrum:who: #:R.rubrum:date:03-JUL-1997 #:R.rubrum:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:R.rubrum:auth:,R., Weizenegger,M. and Schleifer,K.H. #:R.rubrum:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:R.rubrum:title:Comparative sequence analysis of 23S rRNA from #:R.rubrum:rem:ref:1 (bases 1 to 2759) #:R.rubrum:rem:ref:2 (bases 1 to 2759) #:R.rubrum:rem:auth:Ludwig,W. #:R.rubrum:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:R.rubrum:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:R.rubrum:rem:: FRG #:R.rubrum:rem:title:Direct Submission #:R.rubrum:rem:ref:3 (bases 1 to 2759) #:R.rubrum:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:R.rubrum:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:R.rubrum:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:R.rubrum:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:R.rubrum:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:R.rubrum:rem:title:Comparative sequence analysis of 23S rRNA from #:R.rubrum:rem:: proteobacteria #:R.rubrum:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:R.rubrum:rem:GenBank ACCESSION:X87290 #:A.xylinus:name:Acetobacter xylinus #:A.xylinus:subsp:was Acetobacter xylinum #:A.xylinus:strain: #:A.xylinus:atcc: #:A.xylinus:acs:X89812 #:A.xylinus:auth:Boesch,C. #:A.xylinus:title: #:A.xylinus:jour: #:A.xylinus:who: #:A.xylinus:date: #:A.xylinus:rem:LOCUS AX23SRRNA 2748 bp DNA BCT 06-SEP-1995 #:A.xylinus:rem:DEFINITION A.xylinum DNA for 23S ribosomal RNA gene. #:A.xylinus:rem:ACCESSION X89812 #:A.xylinus:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene. #:A.xylinus:rem:SOURCE Acetobacter xylinum. #:A.xylinus:rem: ORGANISM Acetobacter xylinum #:A.xylinus:rem: Eubacteria; Proteobacteria; alpha subdivision; Acetobacteraceae; #:A.xylinus:rem: Acetobacter. #:A.xylinus:rem:REFERENCE 1 (bases 1 to 2748) #:A.xylinus:rem: AUTHORS Boesch,C. #:A.xylinus:rem: JOURNAL Unpublished #:A.xylinus:rem:REFERENCE 2 (bases 1 to 2748) #:A.xylinus:rem: AUTHORS Boesch,C. #:A.xylinus:rem: TITLE Direct Submission #:A.xylinus:rem: JOURNAL Submitted (19-JUL-1995) to the EMBL/GenBank/DDBJ databases. C. #:A.xylinus:rem: Boesch, Laboratory of Food Microbiology, ETH-Zuerich, #:A.xylinus:rem: Schmelzbergstrasse 9, CH-8092 Zuerich, SWITZERLAND #:A.xylinus:rem:COMMENT #:A.xylinus:rem: NCBI gi: 976076 #:A.xylinus:rem:FEATURES Location/Qualifiers #:A.xylinus:rem: source 1..2748 #:A.xylinus:rem: /organism="Acetobacter xylinum" #:A.xylinus:rem: /strain="NCIB" #:A.xylinus:rem: /isolate="11664" #:A.xylinus:rem: rRNA 1..2748 #:A.xylinus:rem: /gene="23S rRNA" #:A.xylinus:rem: /product="23S ribosomal RNA" #:A.xylinus:rem:BASE COUNT 718 a 617 c 852 g 560 t 1 others #:A.xylinus:rem:ORIGIN #:A.intermed:title:dependent #:A.intermed:title:Acetobacter intermedius. spec. nov., is acetic acid tolerant, #:A.intermed:name:Acetobacter intermedius. #:A.intermed:subsp: #:A.intermed:strain: #:A.intermed:atcc: #:A.intermed:acs:Y14680 #:A.intermed:auth:Boesch,C., Treck,J., Teuber,M. and Sievers,M. #:A.intermed:title:in contrast to Acetobacter europaeus not acidic acid #:A.intermed:jour:Unpublished #:A.intermed:who: #:A.intermed:date:02-OCT-1997 #:A.intermed:rem:ref:1 (bases 1 to 2620) #:A.intermed:rem:ref:2 (bases 1 to 2620) #:A.intermed:rem:auth:Boesch,C. #:A.intermed:rem:jour:Submitted (29-AUG-1997) C. Boesch, Laboratory of Food #:A.intermed:rem:: Microbiology, ETH-Zuerich, Schmelzbergstrasse 9, CH-8092 #:A.intermed:rem:: Zuerich, SWITZERLAND #:A.intermed:rem:title:Direct Submission #:A.intermed:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:A.intermed:rem:GenBank ACCESSION:Y14680 #:A.intermed:rem:Related sequence Y14694. #:A.europa.1:name:Acetobacter europaeus #:A.europa.1:subsp: #:A.europa.1:strain: #:A.europa.1:atcc: #:A.europa.1:acs:X89771 #:A.europa.1:auth: #:A.europa.1:title: #:A.europa.1:jour: #:A.europa.1:who: #:A.europa.1:date: #:A.europa.1:rem:ID AE23SRRNA standard; DNA; PRO; 2744 BP. #:A.europa.1:rem:XX #:A.europa.1:rem:AC X89771; #:A.europa.1:rem:XX #:A.europa.1:rem:DT 25-JUL-1995 (Rel. 44, Created) #:A.europa.1:rem:DT 25-JUL-1995 (Rel. 44, Last updated, Version 1) #:A.europa.1:rem:XX #:A.europa.1:rem:DE A.europaeus DNA for 23S ribosomal RNA gene #:A.europa.1:rem:XX #:A.europa.1:rem:KW 23S rRNA; ribosomal RNA. #:A.europa.1:rem:XX #:A.europa.1:rem:OS Acetobacter europaeus #:A.europa.1:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:A.europa.1:rem:OC Aerobic rods and cocci; Azotobacteraceae. #:A.europa.1:rem:XX #:A.europa.1:rem:RN [1] #:A.europa.1:rem:RA Boesch C.; #:A.europa.1:rem:RT ; #:A.europa.1:rem:RL Unpublished. #:A.europa.1:rem:XX #:A.europa.1:rem:RN [2] #:A.europa.1:rem:RP 1-2744 #:A.europa.1:rem:RA Boesch C.; #:A.europa.1:rem:RT ; #:A.europa.1:rem:RL Submitted (18-JUL-1995) to the EMBL/GenBank/DDBJ databases. #:A.europa.1:rem:RL C. Boesch, Laboratory of Food Microbiology, ETH-Z=FCrich, #:A.europa.1:rem:RL Schmelzbergstrasse 9, CH-8092 Z=FCrich, SWITZERLAND #:A.europa.1:rem:XX #:A.europa.1:rem:FH Key Location/Qualifiers #:A.europa.1:rem:FH #:A.europa.1:rem:FT source 1..2744 #:A.europa.1:rem:FT /organism=3D"Acetobacter europaeus" #:A.europa.1:rem:FT /strain=3D"DSM 6160" #:A.europa.1:rem:FT /isolate=3D"DES 11" #:A.europa.1:rem:FT rRNA 1..2744 #:A.europa.1:rem:FT /product=3D"23S ribosomal RNA" #:A.europa.1:rem:XX #:A.europa.1:rem:SQ Sequence 2744 BP; 715 A; 618 C; 852 G; 558 T; 1 other; #:A.europa.2:title:Acetobacter europaeus strain JK2, a new acetic acid #:A.europa.2:name:Acetobacter europaeus. #:A.europa.2:subsp: #:A.europa.2:strain: #:A.europa.2:atcc: #:A.europa.2:acs:Y15288 #:A.europa.2:auth:Trcek,J., Boesch,C., Raspor,P. and Teuber,M. #:A.europa.2:title:independent strain isolated from cider vinegar #:A.europa.2:jour:Unpublished #:A.europa.2:who: #:A.europa.2:date:01-NOV-1997 #:A.europa.2:rem:ref:1 (bases 1 to 2614) #:A.europa.2:rem:ref:2 (bases 1 to 2614) #:A.europa.2:rem:auth:Trcek,J. #:A.europa.2:rem:jour:Submitted (30-OCT-1997) J. Trcek, Laboratory of Food #:A.europa.2:rem:: Microbiology, ETH Zurich, Schmelzbergstrasse 9, CH-8092 #:A.europa.2:rem:: Zurich, SWITZERLAND #:A.europa.2:rem:title:Direct Submission #:A.europa.2:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA. #:A.europa.2:rem:GenBank ACCESSION:Y15288 #:R.ricketts:name:Rickettsia rickettsii #:R.ricketts:subsp: #:R.ricketts:strain: #:R.ricketts:atcc: #:R.ricketts:acs:U11022 #:R.ricketts:auth: #:R.ricketts:title: #:R.ricketts:jour: #:R.ricketts:who: #:R.ricketts:date: #:R.ricketts:rem:LOCUS RRU11022 3069 bp DNA BCT 30-JUN-1994 #:R.ricketts:rem:DEFINITION Rickettsia rickettsii Sawtooth 23S rRNA and 5S rRNA genes, partial #:R.ricketts:rem: sequence, and 23S-5S internal transcribed spacer. #:R.ricketts:rem:ACCESSION U11022 #:R.ricketts:rem:KEYWORDS . #:R.ricketts:rem:SOURCE Rickettsia rickettsii #:R.ricketts:rem: ORGANISM Rickettsia rickettsii #:R.ricketts:rem: Eubacteria; Proteobacteria; alpha subdivision; Rickettsiales; #:R.ricketts:rem: Rickettsiaceae; Rickettsia. #:R.ricketts:rem:REFERENCE 1 (bases 1 to 3069) #:R.ricketts:rem: AUTHORS Stothard,D.R., Clark,J.B. and Fuerst,P.A. #:R.ricketts:rem: TITLE The ancestral divergence of Rickettsia bellii from the spotted #:R.ricketts:rem: fever and typhus groups of Rickettsia, and the antiquity of the #:R.ricketts:rem: genus Rickettsia #:R.ricketts:rem: JOURNAL Int. J. Syst. Bacteriol. (1994) In press #:R.ricketts:rem: STANDARD full automatic #:R.ricketts:rem:REFERENCE 2 (bases 1 to 3069) #:R.ricketts:rem: AUTHORS Fuerst,P.A. #:R.ricketts:rem: TITLE Direct Submission #:R.ricketts:rem: JOURNAL Submitted (17-JUN-1994) Paul A. Fuerst, The Ohio State University, #:R.ricketts:rem: Department of Molecular Genetics, 484 West Twelfth Avenue, #:R.ricketts:rem: Columbus, OH 43210, USA #:R.ricketts:rem: STANDARD full automatic #:R.ricketts:rem:COMMENT #:R.ricketts:rem: NCBI gi: 506788 #:R.ricketts:rem:FEATURES Location/Qualifiers #:R.ricketts:rem: rRNA <1..2699 #:R.ricketts:rem: /product="23S ribosomal RNA" #:R.ricketts:rem: /note="large subunit ribosomal RNA; base 1 estimated to #:R.ricketts:rem: correspond to residue 63 in the 23S rRNA" #:R.ricketts:rem: misc_RNA 2700..2970 #:R.ricketts:rem: /product="23S-5S internal transcribed spacer" #:R.ricketts:rem: /note="23S-5S ITS" #:R.ricketts:rem: rRNA 2971..>3069 #:R.ricketts:rem: /product="5S ribosomal RNA" #:R.ricketts:rem: /note="corresponds to first 99 bases of 5S rRNA sequence" #:R.ricketts:rem: source 1..3069 #:R.ricketts:rem: /strain="Sawtooth" #:R.ricketts:rem: /organism="Rickettsia rickettsii" #:R.ricketts:rem: /specific_host="Dermacentor andersonii" #:R.ricketts:rem:BASE COUNT 914 a 592 c 822 g 737 t 4 others #:R.ricketts:rem:ORIGIN #:R.bellii:name:Rickettsia bellii #:R.bellii:subsp: #:R.bellii:strain: #:R.bellii:atcc: #:R.bellii:acs:U11015 #:R.bellii:auth: #:R.bellii:title: #:R.bellii:jour: #:R.bellii:who: #:R.bellii:date: #:R.bellii:rem:LOCUS RBU11015 3092 bp DNA BCT 30-JUN-1994 #:R.bellii:rem:DEFINITION Rickettsia bellii 369-C 23S rRNA and 5S rRNA genes, partial #:R.bellii:rem: sequence, and 23S-5S internal transcribed spacer. #:R.bellii:rem:ACCESSION U11015 #:R.bellii:rem:KEYWORDS . #:R.bellii:rem:SOURCE Rickettsia bellii #:R.bellii:rem: ORGANISM Rickettsia bellii #:R.bellii:rem: Eubacteria; Proteobacteria; alpha subdivision; Rickettsiales; #:R.bellii:rem: Rickettsiaceae; Rickettsia. #:R.bellii:rem:REFERENCE 1 (bases 1 to 3092) #:R.bellii:rem: AUTHORS Stothard,D.R., Clark,J.B. and Fuerst,P.A. #:R.bellii:rem: TITLE The ancestral divergence of Rickettsia bellii from the spotted #:R.bellii:rem: fever and typhus groups of Rickettsia, and the antiquity of the #:R.bellii:rem: genus Rickettsia #:R.bellii:rem: JOURNAL Int. J. Syst. Bacteriol. (1994) In press #:R.bellii:rem: STANDARD full automatic #:R.bellii:rem:REFERENCE 2 (bases 1 to 3092) #:R.bellii:rem: AUTHORS Fuerst,P.A. #:R.bellii:rem: TITLE Direct Submission #:R.bellii:rem: JOURNAL Submitted (17-JUN-1994) Paul A. Fuerst, The Ohio State University, #:R.bellii:rem: Department of Molecular Genetics, 484 West Twelfth Avenue, #:R.bellii:rem: Columbus, OH 43210, USA #:R.bellii:rem: STANDARD full automatic #:R.bellii:rem:COMMENT #:R.bellii:rem: NCBI gi: 506779 #:R.bellii:rem:FEATURES Location/Qualifiers #:R.bellii:rem: rRNA <1..2697 #:R.bellii:rem: /product="23S ribosomal RNA" #:R.bellii:rem: /note="large subunit ribosomal RNA; 5' nucleotide #:R.bellii:rem: estimated to correspond to approximately base 63 of an #:R.bellii:rem: intact 23S rRNA" #:R.bellii:rem: misc_RNA 2698..2993 #:R.bellii:rem: /product="23S-5S internal transcribed spacer" #:R.bellii:rem: rRNA 2994..>3092 #:R.bellii:rem: /product="5S ribosomal RNA" #:R.bellii:rem: /note="corresponds to first 99 bases of 5S rRNA sequence" #:R.bellii:rem: source 1..3092 #:R.bellii:rem: /strain="strains 369-C and G2D42" #:R.bellii:rem: /organism="Rickettsia bellii" #:R.bellii:rem: /specific_host="Dermacentor variabilis" #:R.bellii:rem:BASE COUNT 912 a 604 c 834 g 741 t 1 others #:R.bellii:rem:ORIGIN #:R.prowazek:name: #:R.prowazek:subsp: #:R.prowazek:strain: #:R.prowazek:atcc: #:R.prowazek:acs:U11018 + Z49077 #:R.prowazek:auth: #:R.prowazek:title: #:R.prowazek:jour: #:R.prowazek:who: #:R.prowazek:date: #:R.prowazek:rem:LOCUS RPU11018 3056 bp DNA BCT 30-JUN-1994 #:R.prowazek:rem:DEFINITION Rickettsia prowazekii 22-2 23S rRNA and 5S rRNA genes, partial #:R.prowazek:rem: sequence, and 23S-5S internal transcribed spacer. #:R.prowazek:rem:ACCESSION U11018 #:R.prowazek:rem:KEYWORDS . #:R.prowazek:rem:SOURCE Rickettsia prowazekii #:R.prowazek:rem: ORGANISM Rickettsia prowazekii #:R.prowazek:rem: Eubacteria; Proteobacteria; alpha subdivision; Rickettsiales; #:R.prowazek:rem: Rickettsiaceae; Rickettsia. #:R.prowazek:rem:REFERENCE 1 (bases 1 to 3056) #:R.prowazek:rem: AUTHORS Stothard,D.R., Clark,J.B. and Fuerst,P.A. #:R.prowazek:rem: TITLE The ancestral divergence of Rickettsia bellii from the spotted #:R.prowazek:rem: fever and typhus groups of Rickettsia, and the antiquity of the #:R.prowazek:rem: genus Rickettsia #:R.prowazek:rem: JOURNAL Int. J. Syst. Bacteriol. (1994) In press #:R.prowazek:rem: STANDARD full automatic #:R.prowazek:rem:REFERENCE 2 (bases 1 to 3056) #:R.prowazek:rem: AUTHORS Fuerst,P.A. #:R.prowazek:rem: TITLE Direct Submission #:R.prowazek:rem: JOURNAL Submitted (17-JUN-1994) Paul A. Fuerst, The Ohio State University, #:R.prowazek:rem: Department of Molecular Genetics, 484 West Twelfth Avenue, #:R.prowazek:rem: Columbus, OH 43210, USA #:R.prowazek:rem: STANDARD full automatic #:R.prowazek:rem:COMMENT #:R.prowazek:rem: NCBI gi: 506783 #:R.prowazek:rem:FEATURES Location/Qualifiers #:R.prowazek:rem: rRNA <1..2699 #:R.prowazek:rem: /product="23S ribosomal RNA" #:R.prowazek:rem: /note="large subunit ribosomal RNA; position 1 estimated #:R.prowazek:rem: to correspond to residue 63 in 23S rRNA" #:R.prowazek:rem: misc_RNA 2700..3029 #:R.prowazek:rem: /product="23-5S internal transcribed spacer" #:R.prowazek:rem: /note="23S-5S ITS" #:R.prowazek:rem: rRNA 2958..>3056 #:R.prowazek:rem: /product="5S ribosomal RNA" #:R.prowazek:rem: /note="corresponds to first 99 bases of 5S rRNA sequence" #:R.prowazek:rem: source 1..3056 #:R.prowazek:rem: /strain="22-2" #:R.prowazek:rem: /organism="Rickettsia prowazekii" #:R.prowazek:rem: /specific_host="Pediculus humanus" #:R.prowazek:rem:BASE COUNT 922 a 570 c 799 g 761 t 4 others #:R.prowazek:rem:ORIGIN #:Wol.pipien:name:Wolbachia pipientis #:Wol.pipien:subsp: #:Wol.pipien:strain: #:Wol.pipien:atcc: #:Wol.pipien:acs:U23710 #:Wol.pipien:auth: #:Wol.pipien:title: #:Wol.pipien:jour: #:Wol.pipien:who: #:Wol.pipien:date: #:Wol.pipien:rem:LOCUS WPU23710 2712 bp DNA BCT 02-FEB-1996 #:Wol.pipien:rem:DEFINITION Wolbachia pipientis 23S ribosomal RNA gene. #:Wol.pipien:rem:ACCESSION U23710 #:Wol.pipien:rem:NID g1173500 #:Wol.pipien:rem:KEYWORDS . #:Wol.pipien:rem:SOURCE Wolbachia pipientis. #:Wol.pipien:rem: ORGANISM Wolbachia pipientis #:Wol.pipien:rem: Eubacteria; Proteobacteria; alpha subdivision; Rickettsiales; #:Wol.pipien:rem: Rickettsiaceae; Wolbachieae; Wolbachia. #:Wol.pipien:rem:REFERENCE 1 (bases 1 to 2712) #:Wol.pipien:rem: AUTHORS Bensaadi-Merchermek,N., Salvado,J.C., Cagnon,C., Karama,S. and #:Wol.pipien:rem: Mouches,C. #:Wol.pipien:rem: TITLE Characterization of the unlinked 16S rDNA and 23S-5S rRNA operon of #:Wol.pipien:rem: Wolbachia pipientis, a prokaryotic parasite of insect gonads #:Wol.pipien:rem: JOURNAL Gene 165, 81-86 (1995) #:Wol.pipien:rem:REFERENCE 2 (bases 1 to 2712) #:Wol.pipien:rem: AUTHORS Bensaadi-Merchermek,N., Salvado,J.C., Cagnon,C., Karama,S. and #:Wol.pipien:rem: Mouches,C. #:Wol.pipien:rem: TITLE Direct Submission #:Wol.pipien:rem: JOURNAL Submitted (29-MAR-1995) Claude Mouches, Laboratoire de Ecologie #:Wol.pipien:rem: Moleculaire - I.B.E.A.S., Universite de Pau et des pays de l'Adour, #:Wol.pipien:rem: Avenue de l'Universite, Pau, 64000, France #:Wol.pipien:rem:COMMENT #:Wol.pipien:rem: NCBI gi: 1173500 #:Wol.pipien:rem:FEATURES Location/Qualifiers #:Wol.pipien:rem: source 1..2712 #:Wol.pipien:rem: /organism="Wolbachia pipientis" #:Wol.pipien:rem: /specific_host="Culex pipiens" #:Wol.pipien:rem: /note="gonadial bacteria of the mosquito Culex pipiens" #:Wol.pipien:rem: rRNA 1..2712 #:Wol.pipien:rem: /product="23S ribosomal RNA" #:Wol.pipien:rem:BASE COUNT 829 a 479 c 712 g 679 t 13 others #:Wol.pipien:rem:ORIGIN #:P.denitrif:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:P.denitrif:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:P.denitrif:auth:,R., Weizenegger,M. and Schleifer,K.H. #:P.denitrif:title:proteobacteria #:P.denitrif:name:Paracoccus denitrificans. #:P.denitrif:subsp: #:P.denitrif:strain: #:P.denitrif:atcc: #:P.denitrif:acs:X87287 #:P.denitrif:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:P.denitrif:title:Comparative sequence analysis of 23S rRNA from #:P.denitrif:jour:Unpublished #:P.denitrif:who: #:P.denitrif:date:03-JUL-1997 #:P.denitrif:rem:ref:1 (bases 1 to 2847) #:P.denitrif:rem:ref:2 (bases 1 to 2847) #:P.denitrif:rem:auth:Ludwig,W. #:P.denitrif:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:P.denitrif:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:P.denitrif:rem:: FRG #:P.denitrif:rem:title:Direct Submission #:P.denitrif:rem:ref:3 (bases 1 to 2847) #:P.denitrif:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:P.denitrif:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:P.denitrif:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:P.denitrif:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:P.denitrif:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:P.denitrif:rem:title:Comparative sequence analysis of 23S rRNA from #:P.denitrif:rem:: proteobacteria #:P.denitrif:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:P.denitrif:rem:GenBank ACCESSION:X87287 #:R.capsulat:name:Rhodobacter capsulatus #:R.capsulat:subsp: #:R.capsulat:strain: #:R.capsulat:atcc: #:R.capsulat:acs:X06485 #:R.capsulat:auth: #:R.capsulat:title: #:R.capsulat:jour:R.capsulatus:who:Robin Gutell #:R.capsulat:who:Robin Gutell #:R.capsulat:date:Mon Apr 18 18:18:08 1988 #:R.capsulat:rem:Phylo:Eubacteria,Purple,alpha,3 #:R.sphaer.A:name:Rhodobacter sphaeroides #:R.sphaer.A:subsp:operon A #:R.sphaer.A:strain: #:R.sphaer.A:atcc: #:R.sphaer.A:acs:X53853 #:R.sphaer.A:auth: #:R.sphaer.A:title: #:R.sphaer.A:jour: #:R.sphaer.A:who: #:R.sphaer.A:date: #:R.sphaer.A:rem:ID RRNADONE PRELIMINARY; DNA; 6442 BP. #:R.sphaer.A:rem:DE OPERON RRNA FROM RHODOBACTER SPHAEROIDES 2.4.1 #:R.sphaer.A:rem:DE SYLVIA C. DRYDEN AND SAMUEL KAPLAN #:R.sphaer.A:rem:SQ SEQUENCE 6442 BP; 1504 A; 1625 C; 2040 G; 1273 T; #:R.sphaer.B:name:Rhodobacter sphaeroides #:R.sphaer.B:subsp:operon B #:R.sphaer.B:strain: #:R.sphaer.B:atcc: #:R.sphaer.B:acs:X53854 #:R.sphaer.B:auth: #:R.sphaer.B:title: #:R.sphaer.B:jour: #:R.sphaer.B:who: #:R.sphaer.B:date: #:R.sphaer.B:rem:ID RRNBDONE PRELIMINARY; DNA; 6565 BP. #:R.sphaer.B:rem:DE OPERON RRNB FROM RHODOBACTER SPHAEROIDES 2.4.1 #:R.sphaer.B:rem:DE SYLVIA C. DRYDEN AND SAMUEL KAPLAN #:R.sphaer.B:rem:SQ SEQUENCE 6565 BP; 1561 A; 1687 C; 2058 G; 1259 T; #:R.sphaer.C:name:Rhodobacter sphaeroides #:R.sphaer.C:subsp:operon C #:R.sphaer.C:strain: #:R.sphaer.C:atcc: #:R.sphaer.C:acs:X53855 #:R.sphaer.C:auth: #:R.sphaer.C:title: #:R.sphaer.C:jour: #:R.sphaer.C:who: #:R.sphaer.C:date: #:R.sphaer.C:rem:ID RRNCDONE PRELIMINARY; DNA; 6163 BP. #:R.sphaer.C:rem:DE OPERON RRNC FROM RHODOBACTER SPHAEROIDES 2.4.1 #:R.sphaer.C:rem:DE SYLVIA C. DRYDEN AND SAMUEL KAPLAN #:R.sphaer.C:rem:SQ SEQUENCE 6163 BP; 1470 A; 1551 C; 1936 G; 1206 T; #:Z.mobilis:name:Zymomonas mobilis. #:Z.mobilis:subsp: #:Z.mobilis:strain: #:Z.mobilis:atcc: #:Z.mobilis:acs:AF086792 #:Z.mobilis:auth:Lee,J.S., Jin,S.J., Kang,H.L. and Kang,H.S. #:Z.mobilis:title:ZM4 #:Z.mobilis:jour:Unpublished #:Z.mobilis:who: #:Z.mobilis:date:21-SEP-1998 #:Z.mobilis:title:Molecular organization of the ribosomal RNA transcription #:Z.mobilis:title:unit (rrnA) and the phylogenetic study of Zymomonas mobilis #:Z.mobilis:rem:ref:1 (bases 1 to 6250) #:Z.mobilis:rem:ref:2 (bases 1 to 6250) #:Z.mobilis:rem:auth:Lee,J.S., Jin,S.J., Kang,H.L. and Kang,H.S. #:Z.mobilis:rem:jour:Submitted (26-AUG-1998) Microbiology, Seoul National #:Z.mobilis:rem:: University, San56-1 Shilimdong Gwanakgu, Seoul 151-742, #:Z.mobilis:rem:: Korea #:Z.mobilis:rem:title:Direct Submission #:Z.mobilis:rem:KEYWORDS:. #:Z.mobilis:rem:GenBank ACCESSION:AF0867 2 #:B.diminuta:name:Brevundimonas diminuta. #:B.diminuta:subsp: #:B.diminuta:strain: #:B.diminuta:atcc: #:B.diminuta:acs:X87288 #:B.diminuta:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:B.diminuta:title:Comparative sequence analysis of 23S rRNA from #:B.diminuta:jour:Unpublished #:B.diminuta:who: #:B.diminuta:date:03-JUL-1997 #:B.diminuta:auth:,R., Weizenegger,M. and Schleifer,K.H. #:B.diminuta:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:B.diminuta:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:B.diminuta:title:proteobacteria #:B.diminuta:rem:ref:1 (bases 1 to 2780) #:B.diminuta:rem:ref:2 (bases 1 to 2780) #:B.diminuta:rem:auth:Ludwig,W. #:B.diminuta:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:B.diminuta:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:B.diminuta:rem:: FRG #:B.diminuta:rem:title:Direct Submission #:B.diminuta:rem:ref:3 (bases 1 to 2780) #:B.diminuta:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:B.diminuta:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:B.diminuta:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:B.diminuta:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:B.diminuta:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:B.diminuta:rem:title:Comparative sequence analysis of 23S rRNA from #:B.diminuta:rem:: proteobacteria #:B.diminuta:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:B.diminuta:rem:GenBank ACCESSION:X87288 #:R.palustri:name:Rhodopseudomonas palustris #:R.palustri:subsp: #:R.palustri:strain: #:R.palustri:atcc: #:R.palustri:acs:X71839; X71939 #:R.palustri:auth: #:R.palustri:title: #:R.palustri:jour: #:R.palustri:who: #:R.palustri:date: #:R.palustri:rem:ID RP23SRRN standard; DNA; PRO; 2826 BP. #:R.palustri:rem:XX #:R.palustri:rem:AC X71839; X71939; #:R.palustri:rem:XX #:R.palustri:rem:DT 28-MAR-1994 (Rel. 39, Created) #:R.palustri:rem:DT 28-MAR-1994 (Rel. 39, Last updated, Version 7) #:R.palustri:rem:XX #:R.palustri:rem:DE R.palustris gene for 23S ribosomal RNA #:R.palustri:rem:XX #:R.palustri:rem:KW 23S ribosomal RNA; ribosomal RNA. #:R.palustri:rem:XX #:R.palustri:rem:OS Rhodopseudomonas palustris #:R.palustri:rem:OC Prokaryota; Bacteria; Gracilicutes; Anoxyphotobacteria; #:R.palustri:rem:OC Purple bacteria; Purple nonsulfur bacteria. #:R.palustri:rem:XX #:R.palustri:rem:RN [1] #:R.palustri:rem:RA Springer N., Ludwig W., Hardarson G.; #:R.palustri:rem:RT "A 23S rRNA targeted specific hybridization probe for #:R.palustri:rem:RT Bradyrhizobium japonicum"; #:R.palustri:rem:RL Syst. Appl. Microbiol. 16:468-470(1993). #:R.palustri:rem:XX #:R.palustri:rem:RN [2] #:R.palustri:rem:RP 1-2826 #:R.palustri:rem:RA Ludwig W.; #:R.palustri:rem:RT ; #:R.palustri:rem:RL Submitted (05-MAY-1993) to the EMBL/GenBank/DDBJ databases. #:R.palustri:rem:RL W. Ludwig, Lehrst. f. Mikrobiologie TU Muenchen, Arcisstr. 21, 8000 #:R.palustri:rem:RL Muenchen 2, FRG #:R.palustri:rem:XX #:R.palustri:rem:CC Entry cited incorrectly as X71939 in journal #:R.palustri:rem:XX #:R.palustri:rem:FH Key Location/Qualifiers #:R.palustri:rem:FH #:R.palustri:rem:FT source 1..2826 #:R.palustri:rem:FT /organism="Rhodopseudomonas palustris" #:R.palustri:rem:FT /strain="DSM 126" #:R.palustri:rem:FT rRNA 1..2826 #:R.palustri:rem:FT /product="23S ribosomal RNA" #:R.palustri:rem:XX #:R.palustri:rem:SQ Sequence 2826 BP; 733 A; 651 C; 862 G; 580 T; 0 other; #:B.lupini:name:Bradyrhizobium lupini. #:B.lupini:subsp: #:B.lupini:strain: #:B.lupini:atcc: #:B.lupini:acs:X87283 #:B.lupini:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:B.lupini:title:Comparative sequence analysis of 23S rRNA from #:B.lupini:jour:Unpublished #:B.lupini:who: #:B.lupini:date:03-JUL-1997 #:B.lupini:auth:,R., Weizenegger,M. and Schleifer,K.H. #:B.lupini:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:B.lupini:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:B.lupini:title:proteobacteria #:B.lupini:rem:ref:1 (bases 1 to 2882) #:B.lupini:rem:ref:2 (bases 1 to 2882) #:B.lupini:rem:auth:Ludwig,W. #:B.lupini:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:B.lupini:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:B.lupini:rem:: FRG #:B.lupini:rem:title:Direct Submission #:B.lupini:rem:ref:3 (bases 1 to 2882) #:B.lupini:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:B.lupini:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:B.lupini:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:B.lupini:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:B.lupini:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:B.lupini:rem:title:Comparative sequence analysis of 23S rRNA from #:B.lupini:rem:: proteobacteria #:B.lupini:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:B.lupini:rem:GenBank ACCESSION:X87283 #:B.japoni.1:name:Bradyrhizobium japonicum #:B.japoni.1:subsp: #:B.japoni.1:strain: #:B.japoni.1:atcc: #:B.japoni.1:acs:X71840 #:B.japoni.1:auth: #:B.japoni.1:title: #:B.japoni.1:jour: #:B.japoni.1:who: #:B.japoni.1:date: #:B.japoni.1:rem:ID BJ23SRRN standard; DNA; PRO; 2882 BP. #:B.japoni.1:rem:XX #:B.japoni.1:rem:AC X71840; #:B.japoni.1:rem:XX #:B.japoni.1:rem:DT 28-MAR-1994 (Rel. 39, Created) #:B.japoni.1:rem:DT 28-MAR-1994 (Rel. 39, Last updated, Version 2) #:B.japoni.1:rem:XX #:B.japoni.1:rem:DE B.japonicum gene for 23S ribosomal RNA #:B.japoni.1:rem:XX #:B.japoni.1:rem:KW 23S ribosomal RNA; ribosomal RNA. #:B.japoni.1:rem:XX #:B.japoni.1:rem:OS Bradyrhizobium japonicum #:B.japoni.1:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:B.japoni.1:rem:OC Aerobic rods and cocci; Rhizobiaceae. #:B.japoni.1:rem:XX #:B.japoni.1:rem:RN [1] #:B.japoni.1:rem:RA Springer N., Ludwig W., Hardarson G.; #:B.japoni.1:rem:RT "A 23S rRNA targeted specific hybridization probe for #:B.japoni.1:rem:RT Bradyrhizobium japonicum"; #:B.japoni.1:rem:RL Syst. Appl. Microbiol. 16:468-470(1993). #:B.japoni.1:rem:XX #:B.japoni.1:rem:RN [2] #:B.japoni.1:rem:RP 1-2882 #:B.japoni.1:rem:RA Ludwig W.; #:B.japoni.1:rem:RT ; #:B.japoni.1:rem:RL Submitted (05-MAY-1993) to the EMBL/GenBank/DDBJ databases. #:B.japoni.1:rem:RL W. Ludwig, Lehrst. f. Mikrobiologie TU Muenchen, Arcisstr. 21, 8000 #:B.japoni.1:rem:RL Muenchen 2, FRG #:B.japoni.1:rem:XX #:B.japoni.1:rem:FH Key Location/Qualifiers #:B.japoni.1:rem:FH #:B.japoni.1:rem:FT source 1..2882 #:B.japoni.1:rem:FT /organism="Bradyrhizobium japonicum" #:B.japoni.1:rem:FT /strain="DSM 30131" #:B.japoni.1:rem:FT rRNA 1..2882 #:B.japoni.1:rem:FT /product="23S ribosomal RNA" #:B.japoni.1:rem:XX #:B.japoni.1:rem:SQ Sequence 2882 BP; 751 A; 656 C; 887 G; 588 T; 0 other; #:B.japoni.2:name:Bradyrhizobium japonicum #:B.japoni.2:subsp: #:B.japoni.2:strain: #:B.japoni.2:atcc: #:B.japoni.2:acs:Z35330 #:B.japoni.2:auth:Christoph Kuendig #:B.japoni.2:title: #:B.japoni.2:jour: #:B.japoni.2:who: #:B.japoni.2:date: #:B.japoni.2:name: #:B.japoni.2:subsp: #:B.japoni.2:strain: #:B.japoni.2:atcc: #:B.japoni.2:acs: #:B.japoni.2:auth: #:B.japoni.2:title: #:B.japoni.2:jour: #:B.japoni.2:who: #:B.japoni.2:date: #:B.japoni.2:rem:ID BJRIBRNA standard; DNA; PRO; 6726 BP. #:B.japoni.2:rem:XX #:B.japoni.2:rem:AC Z35330; #:B.japoni.2:rem:XX #:B.japoni.2:rem:DT 22-JUL-1994 (Rel. 40, Created) #:B.japoni.2:rem:DT 22-JUL-1994 (Rel. 40, Last updated, Version 1) #:B.japoni.2:rem:XX #:B.japoni.2:rem:DE B.japonicum (110) genes for 16S, 23S, 5S ribosomal RNA, transfer #:B.japoni.2:rem:DE RNA-Ala transfer RNA-Ala #:B.japoni.2:rem:XX #:B.japoni.2:rem:KW 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; #:B.japoni.2:rem:KW transfer RNA-Ala; transfer RNA-Ile. #:B.japoni.2:rem:XX #:B.japoni.2:rem:OS Bradyrhizobium japonicum #:B.japoni.2:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:B.japoni.2:rem:OC Aerobic rods and cocci; Rhizobiaceae. #:B.japoni.2:rem:XX #:B.japoni.2:rem:RN [1] #:B.japoni.2:rem:RP 1-6726 #:B.japoni.2:rem:RA Kuendig C., Goettfert M., Beck C., Hennecke H.; #:B.japoni.2:rem:RT "Localization and organization of the single rRNA operon of #:B.japoni.2:rem:RT Bradyrhizobium japonicum"; #:B.japoni.2:rem:RL Unpublished. #:B.japoni.2:rem:XX #:B.japoni.2:rem:RN [2] #:B.japoni.2:rem:RP 1-6726 #:B.japoni.2:rem:RA Kuendig C.; #:B.japoni.2:rem:RT ; #:B.japoni.2:rem:RL Submitted (21-JUL-1994) to the EMBL/GenBank/DDBJ databases. #:B.japoni.2:rem:RL Kuendig C., ETH Zuerich, Mikrobiologisches Institut, #:B.japoni.2:rem:RL Schmelzbergstrasse 7, Zuerich, Zuerich, Switzerland, 8092 #:B.japoni.2:rem:XX #:B.japoni.2:rem:FH Key Location/Qualifiers #:B.japoni.2:rem:FH #:B.japoni.2:rem:FT source 1..6726 #:B.japoni.2:rem:FT /organism="Bradyrhizobium japonicum" #:B.japoni.2:rem:FT /strain="110" #:B.japoni.2:rem:FT rRNA 841..2330 #:B.japoni.2:rem:FT /product="16S ribosomal RNA" #:B.japoni.2:rem:FT /gene="rrs" #:B.japoni.2:rem:FT tRNA 2557..2633 #:B.japoni.2:rem:FT /product="transfer RNA-Ile" #:B.japoni.2:rem:FT tRNA 2666..2742 #:B.japoni.2:rem:FT /product="transfer RNA-Ala" #:B.japoni.2:rem:FT rRNA 3139..6012 #:B.japoni.2:rem:FT /product="23S ribosomal RNA" #:B.japoni.2:rem:FT /gene="rrl" #:B.japoni.2:rem:FT rRNA 6119..6237 #:B.japoni.2:rem:FT /product="5S ribosomal RNA" #:B.japoni.2:rem:FT /gene="rrf" #:B.japoni.2:rem:FT misc_feature 6282..6314 #:B.japoni.2:rem:FT /function="terminator" #:B.japoni.2:rem:XX #:B.japoni.2:rem:SQ Sequence 6726 BP; 1590 A; 1675 C; 2029 G; 1432 T; 0 other; #:B.japoni.2:rem:We localized the genes as follows: #:B.japoni.2:rem:rrs: 842-2329 #:B.japoni.2:rem:Ile tRNA: 2557-2633 #:B.japoni.2:rem:Ala tRNA: 2667-2742 #:B.japoni.2:rem:rrl: 3139-6012 #:B.japoni.2:rem:rrs: 6119-6237 #:A.vitis:name:Agrobacterium vitis #:A.vitis:subsp: #:A.vitis:strain: #:A.vitis:atcc: #:A.vitis:acs:U28505 #:A.vitis:auth: #:A.vitis:title: #:A.vitis:jour: #:A.vitis:who: #:A.vitis:date: #:A.vitis:rem:LOCUS AVU28505 7534 bp DNA BCT 02-JAN-1996 #:A.vitis:rem:DEFINITION Agrobacterium vitis ribosomal RNA operon 16S ribosomal RNA, 23S #:A.vitis:rem: ribosomal RNA, 5S ribosomal RNA, tRNA-Ile, tRNA-Ala, and tRNA-fMet #:A.vitis:rem: genes, complete sequence. #:A.vitis:rem:ACCESSION U28505 #:A.vitis:rem:NID g1143912 #:A.vitis:rem:KEYWORDS . #:A.vitis:rem:SOURCE Agrobacterium vitis. #:A.vitis:rem: ORGANISM Agrobacterium vitis #:A.vitis:rem: Eubacteria; Proteobacteria; alpha subdivision; Rhizobiaceae; #:A.vitis:rem: Agrobacterium. #:A.vitis:rem:REFERENCE 1 (bases 1 to 7534) #:A.vitis:rem: AUTHORS Otten,L., De,Ruffray,P., de,Lajudie,P. and Michot,B. #:A.vitis:rem: TITLE Sequence and characterization of a ribosomal RNA operon from #:A.vitis:rem: Agrobacterium vitis #:A.vitis:rem: JOURNAL Unpublished #:A.vitis:rem:REFERENCE 2 (bases 1 to 7534) #:A.vitis:rem: AUTHORS Otten,L., De,Ruffray,P., de,Lajudie,P. and Michot,B. #:A.vitis:rem: TITLE Direct Submission #:A.vitis:rem: JOURNAL Submitted (07-JUN-1995) Leon Otten, Institute of Plant Molecular #:A.vitis:rem: Biology, Rue Du General Zimmer 12, Strasburg, France #:A.vitis:rem:COMMENT #:A.vitis:rem: NCBI gi: 1143912 #:A.vitis:rem:FEATURES Location/Qualifiers #:A.vitis:rem: source 1..7534 #:A.vitis:rem: /organism="Agrobacterium vitis" #:A.vitis:rem: /strain="S4" #:A.vitis:rem: repeat_region 621..647 #:A.vitis:rem: /note="inverted repeat" #:A.vitis:rem: rRNA 800..2359 #:A.vitis:rem: /product="16S ribosomal rRNA" #:A.vitis:rem: repeat_region 2541..2567 #:A.vitis:rem: /note="inverted repeat" #:A.vitis:rem: tRNA 2754..2830 #:A.vitis:rem: /anticodon=(pos:unspecified,aa:Ile) #:A.vitis:rem: /product="tRNA-Ile" #:A.vitis:rem: tRNA 2914..2990 #:A.vitis:rem: /anticodon=(pos:unspecified,aa:Ala) #:A.vitis:rem: /product="tRNA-Ala" #:A.vitis:rem: rRNA 3633..6574 #:A.vitis:rem: /product="23S ribosomal RNA" #:A.vitis:rem: rRNA 6805..6923 #:A.vitis:rem: /product="5S ribsomal RNA" #:A.vitis:rem: tRNA 7041..7165 #:A.vitis:rem: /anticodon=(pos:unspecified,aa:Met) #:A.vitis:rem: /product="tRNA-fMet" #:A.vitis:rem: terminator 7147..7165 #:A.vitis:rem:BASE COUNT 1886 a 1725 c 2219 g 1703 t 1 others #:A.vitis:rem:ORIGIN #:B.bacillif:name:Bartonella bacilliformis #:B.bacillif:subsp: #:B.bacillif:strain:strain KC584 #:B.bacillif:atcc: #:B.bacillif:acs:L39095 #:B.bacillif:auth:Minnick,M.F. and Mitchell,S.J. #:B.bacillif:title: #:B.bacillif:jour: #:B.bacillif:who: #:B.bacillif:date: #:B.bacillif:rem:LOCUS BAORG23S 2821 bp ds-DNA BCT 25-JAN-1995 #:B.bacillif:rem:DEFINITION Bartonella bacilliformis 23S ribosomal RNA (23S rRNA) gene. #:B.bacillif:rem:ACCESSION L39095 #:B.bacillif:rem:KEYWORDS 23S ribosomal RNA. #:B.bacillif:rem:SOURCE Bartonella bacilliformis (strain KC584) DNA. #:B.bacillif:rem: ORGANISM Bartonella bacilliformis #:B.bacillif:rem: Prokaryotae; Gracilicutes; Scotobacteria; Rickettsias; #:B.bacillif:rem: Bartonellaceae. #:B.bacillif:rem:REFERENCE 1 (bases 1 to 2821) #:B.bacillif:rem: AUTHORS Minnick,M.F. and Mitchell,S.J. #:B.bacillif:rem: TITLE Nucleotide sequence of the 23S ribosomal RNA gene of Bartonella #:B.bacillif:rem: bacilliformis #:B.bacillif:rem: JOURNAL Unpublished (1995) #:B.bacillif:rem: STANDARD full automatic #:B.bacillif:rem:COMMENT #:B.bacillif:rem: NCBI gi: 639635 #:B.bacillif:rem:FEATURES Location/Qualifiers #:B.bacillif:rem: source 1..2821 #:B.bacillif:rem: /organism="Bartonella bacilliformis" #:B.bacillif:rem: /strain="KC584" #:B.bacillif:rem: /sequenced_mol="DNA" #:B.bacillif:rem: rRNA 1..2821 #:B.bacillif:rem: /gene="23S rRNA" #:B.bacillif:rem: /product="23S ribosomal RNA" #:B.bacillif:rem: misc_feature 1..41 #:B.bacillif:rem: /note="Sequence previously reported in GENBANK accession # #:B.bacillif:rem: L26364; putative" #:B.bacillif:rem: misc_feature 2776..2821 #:B.bacillif:rem: /note="Sequence previously reported in GENBANK accession # #:B.bacillif:rem: L08503; putative" #:B.bacillif:rem:BASE COUNT 767 a 601 c 829 g 624 t #:B.bacillif:rem:ORIGIN #:Z.ramigera:name:Zoogloea ramigera. #:Z.ramigera:subsp: #:Z.ramigera:strain: #:Z.ramigera:atcc: #:Z.ramigera:acs:X88894 #:Z.ramigera:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:Z.ramigera:title:Comparative sequence analysis of 23S rRNA from #:Z.ramigera:jour:Unpublished #:Z.ramigera:who: #:Z.ramigera:date:03-JUL-1997 #:Z.ramigera:auth:,R., Weizenegger,M. and Schleifer,K.H. #:Z.ramigera:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:Z.ramigera:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:Z.ramigera:title:proteobacteria #:Z.ramigera:rem:ref:1 (bases 1 to 2812) #:Z.ramigera:rem:ref:2 (bases 1 to 2812) #:Z.ramigera:rem:auth:Ludwig,W. #:Z.ramigera:rem:jour:Submitted (21-JUN-1995) W. Ludwig, Lehrstuhl fuer #:Z.ramigera:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:Z.ramigera:rem:: FRG #:Z.ramigera:rem:title:Direct Submission #:Z.ramigera:rem:ref:3 (bases 1 to 2812) #:Z.ramigera:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:Z.ramigera:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:Z.ramigera:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:Z.ramigera:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:Z.ramigera:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:Z.ramigera:rem:title:Comparative sequence analysis of 23S rRNA from #:Z.ramigera:rem:: proteobacteria #:Z.ramigera:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:Z.ramigera:rem:GenBank ACCESSION:X88894 #:PURPLE.BET:name: #:PURPLE.BET:subsp: #:PURPLE.BET:strain: #:PURPLE.BET:atcc: #:PURPLE.BET:acs:DIVIDER #:PURPLE.BET:auth: #:PURPLE.BET:title: #:PURPLE.BET:jour: #:PURPLE.BET:who:Robin Gutell,MCDB-256,28595,7868901 #:PURPLE.BET:date:Fri Dec 17 13:15:42 1993 #:N.meningit:name:Neisseria meningitidis #:N.meningit:subsp: #:N.meningit:strain: #:N.meningit:atcc: #:N.meningit:acs:X67300 #:N.meningit:auth: #:N.meningit:title: #:N.meningit:jour: #:N.meningit:who: #:N.meningit:date: #:N.meningit:rem:ID NM23SRRNA standard; DNA; PRO; 2890 BP. #:N.meningit:rem:XX #:N.meningit:rem:AC X67300; #:N.meningit:rem:XX #:N.meningit:rem:DT 21-OCT-1992 (Rel. 33, Created) #:N.meningit:rem:DT 21-OCT-1992 (Rel. 33, Last updated, Version 2) #:N.meningit:rem:XX #:N.meningit:rem:DE N.meningitidis gene for 23S rRNA #:N.meningit:rem:XX #:N.meningit:rem:KW 23S ribosomal RNA; ribosomal RNA. #:N.meningit:rem:XX #:N.meningit:rem:OS Neisseria meningitidis #:N.meningit:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:N.meningit:rem:OC Aerobic rods and cocci; Neisseriaceae. #:N.meningit:rem:XX #:N.meningit:rem:RN [1] #:N.meningit:rem:RP 1-2890 #:N.meningit:rem:RA Wolff K.; #:N.meningit:rem:RT ; #:N.meningit:rem:RL Submitted (15-JUL-1992) on tape to the EMBL Data Library by: #:N.meningit:rem:RL K. Wolff, Boehringer Mannheim GmbH, Nonnenwald 2, 8122 Penzberg, #:N.meningit:rem:RL FRG #:N.meningit:rem:XX #:N.meningit:rem:RN [2] #:N.meningit:rem:RP 1-2890 #:N.meningit:rem:RA Wolff K., Sperka S., Stern A.; #:N.meningit:rem:RT "Phylogeny and nucleotide sequence of a 23S rRNA gene from #:N.meningit:rem:RT Neisseria gonorrhoeae and Neisseria meningitidis"; #:N.meningit:rem:RL Nucleic Acids Res. 20:4657-4657(1992). #:N.meningit:rem:XX #:N.meningit:rem:CC *source: strain=ssp serotype D, strain 3-1; #:N.meningit:rem:CC *source: clone=23S-2, 23S-9, 23S-16, 23S-23; #:N.meningit:rem:CC *source: isolate=1941; #:N.meningit:rem:XX #:N.meningit:rem:FH Key Location/Qualifiers #:N.meningit:rem:FH #:N.meningit:rem:FT rRNA 1..2890 #:N.meningit:rem:FT /product="23S ribosomal RNA" #:N.meningit:rem:XX #:N.meningit:rem:SQ Sequence 2890 BP; 792 A; 619 C; 875 G; 604 T; 0 other; #:N.meningit:rem:N.meningitidis agtcaagtgaataagtgcatcaggtggatgccttggcgatgataggcgacgaaggacgtg #:N.gonorrho:name:Neisseria gonorrhoeae #:N.gonorrho:subsp: #:N.gonorrho:strain: #:N.gonorrho:atcc: #:N.gonorrho:acs:X67293 #:N.gonorrho:auth: #:N.gonorrho:title: #:N.gonorrho:jour: #:N.gonorrho:who: #:N.gonorrho:date: #:N.gonorrho:rem:ID NG23SRRNA standard; DNA; PRO; 2890 BP. #:N.gonorrho:rem:XX #:N.gonorrho:rem:AC X67293; #:N.gonorrho:rem:XX #:N.gonorrho:rem:DT 25-SEP-1992 (Rel. 33, Created) #:N.gonorrho:rem:DT 25-SEP-1992 (Rel. 33, Last updated, Version 3) #:N.gonorrho:rem:XX #:N.gonorrho:rem:DE N.gonorrhoeae gene for 23S rRNA #:N.gonorrho:rem:XX #:N.gonorrho:rem:KW 23S ribosomal RNA; ribosomal RNA. #:N.gonorrho:rem:XX #:N.gonorrho:rem:OS Neisseria gonorrhoeae #:N.gonorrho:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:N.gonorrho:rem:OC Aerobic rods and cocci; Neisseriaceae. #:N.gonorrho:rem:XX #:N.gonorrho:rem:RN [1] #:N.gonorrho:rem:RP 1-2890 #:N.gonorrho:rem:RA Wolff K., Sperka S., Stern A.; #:N.gonorrho:rem:RT "Phylogeny and nucleotide sequence of a 23S rRNA gene from #:N.gonorrho:rem:RT Neisseria gonorrhoeae and Neisseria meningitidis"; #:N.gonorrho:rem:RL Nucleic Acids Res. 20:4657-4657(1992). #:N.gonorrho:rem:XX #:N.gonorrho:rem:RN [2] #:N.gonorrho:rem:RP 1-2890 #:N.gonorrho:rem:RA Wolff K.; #:N.gonorrho:rem:RT ; #:N.gonorrho:rem:RL Submitted (15-JUL-1992) on tape to the EMBL Data Library by: #:N.gonorrho:rem:RL K. Wolff, Boehringer Mannheim GmbH, Nonnenwald 2, 8122 Penzberg, #:N.gonorrho:rem:RL FRG #:N.gonorrho:rem:XX #:N.gonorrho:rem:CC *source: strain=MS11; #:N.gonorrho:rem:CC *source: clone=23S-1, 23S-8, 23S-15, 23S-22; #:N.gonorrho:rem:XX #:N.gonorrho:rem:FH Key Location/Qualifiers #:N.gonorrho:rem:FH #:N.gonorrho:rem:FT rRNA 1..2890 #:N.gonorrho:rem:FT /product="23S ribosomal RNA" #:N.gonorrho:rem:XX #:N.gonorrho:rem:SQ Sequence 2890 BP; 783 A; 623 C; 884 G; 600 T; 0 other; #:R.picketti:auth:Wullings,B.A., Van Beuningen,A.R., Janse,J.D. and Akkermans,A #:R.picketti:title:FISH detection of the brownrot causing Ralstonia Solanacearum #:R.picketti:name:Ralstonia pickettii. #:R.picketti:subsp: #:R.picketti:strain:PD1515 23S ribosomal RNA gene, partial sequence #:R.picketti:atcc: #:R.picketti:acs:AF012421 #:R.picketti:auth:.D.L. #:R.picketti:title:using 23S rRNA-targeted probes #:R.picketti:jour:Unpublished #:R.picketti:who: #:R.picketti:date:02-JAN-1998 #:R.picketti:rem:ref:1 (bases 1 to 2816) #:R.picketti:rem:ref:2 (bases 1 to 2816) #:R.picketti:rem:auth:Wullings,B.A. #:R.picketti:rem:jour:Submitted (07-JUL-1997) Microbiology, Wageningen #:R.picketti:rem:: Agricultural University, Hesselink van Suchtelenweg 4, #:R.picketti:rem:: Wageningen, - 6703 CT, The Netherlands #:R.picketti:rem:title:Direct Submission #:R.picketti:rem:KEYWORDS:. #:R.picketti:rem:GenBank ACCESSION:AF0124 1 #:R.solana.1:auth:Wullings,B.A., Van Beuningen,A.R., Janse,J.D. and Akkermans,A #:R.solana.1:title:FISH detection of the brownrot causing Ralstonia Solanacearum #:R.solana.1:name:Ralstonia solanacearum. #:R.solana.1:subsp: #:R.solana.1:strain:PD278 23S ribosomal RNA gene, partial sequence #:R.solana.1:atcc: #:R.solana.1:acs:AF012416 #:R.solana.1:auth:.D.L. #:R.solana.1:title:using 23S rRNA-targeted probes #:R.solana.1:jour:Unpublished #:R.solana.1:who: #:R.solana.1:date:02-JAN-1998 #:R.solana.1:rem:ref:1 (bases 1 to 2816) #:R.solana.1:rem:ref:2 (bases 1 to 2816) #:R.solana.1:rem:auth:Wullings,B.A. #:R.solana.1:rem:jour:Submitted (07-JUL-1997) Microbiology, Wageningen #:R.solana.1:rem:: Agricultural University, Hesselink van Suchtelenweg 4, #:R.solana.1:rem:: Wageningen, - 6703 CT, The Netherlands #:R.solana.1:rem:title:Direct Submission #:R.solana.1:rem:KEYWORDS:. #:R.solana.1:rem:GenBank ACCESSION:AF0124 6 #:R.solana.2:auth:.D.L. #:R.solana.2:title:using 23S rRNA-targeted probes #:R.solana.2:name:Ralstonia solanacearum. #:R.solana.2:subsp: #:R.solana.2:strain:PD1445 23S ribosomal RNA gene, partial sequence #:R.solana.2:atcc: #:R.solana.2:acs:AF012417 #:R.solana.2:auth:Wullings,B.A., Van Beuningen,A.R., Janse,J.D. and Akkermans,A #:R.solana.2:title:FISH detection of the brownrot causing Ralstonia Solanacearum #:R.solana.2:jour:Unpublished #:R.solana.2:who: #:R.solana.2:date:02-JAN-1998 #:R.solana.2:rem:ref:1 (bases 1 to 2816) #:R.solana.2:rem:ref:2 (bases 1 to 2816) #:R.solana.2:rem:auth:Wullings,B.A. #:R.solana.2:rem:jour:Submitted (07-JUL-1997) Microbiology, Wageningen #:R.solana.2:rem:: Agricultural University, Hesselink van Suchtelenweg 4, #:R.solana.2:rem:: Wageningen, - 6703 CT, The Netherlands #:R.solana.2:rem:title:Direct Submission #:R.solana.2:rem:KEYWORDS:. #:R.solana.2:rem:GenBank ACCESSION:AF0124 7 #:R.solana.3:auth:Wullings,B.A., Van Beuningen,A.R., Janse,J.D. and Akkermans,A #:R.solana.3:title:FISH detection of the brownrot causing Ralstonia Solanacearum #:R.solana.3:name:Ralstonia solanacearum. #:R.solana.3:subsp: #:R.solana.3:strain:PD1449 23S ribosomal RNA gene, partial sequence #:R.solana.3:atcc: #:R.solana.3:acs:AF012418 #:R.solana.3:auth:.D.L. #:R.solana.3:title:using 23S rRNA-targeted probes #:R.solana.3:jour:Unpublished #:R.solana.3:who: #:R.solana.3:date:02-JAN-1998 #:R.solana.3:rem:ref:1 (bases 1 to 2816) #:R.solana.3:rem:ref:2 (bases 1 to 2816) #:R.solana.3:rem:auth:Wullings,B.A. #:R.solana.3:rem:jour:Submitted (07-JUL-1997) Microbiology, Wageningen #:R.solana.3:rem:: Agricultural University, Hesselink van Suchtelenweg 4, #:R.solana.3:rem:: Wageningen, - 6703 CT, The Netherlands #:R.solana.3:rem:title:Direct Submission #:R.solana.3:rem:KEYWORDS:. #:R.solana.3:rem:GenBank ACCESSION:AF0124 8 #:R.solana.4:auth:.D.L. #:R.solana.4:title:using 23S rRNA-targeted probes #:R.solana.4:name:Ralstonia solanacearum. #:R.solana.4:subsp: #:R.solana.4:strain:PD1450 23S ribosomal RNA gene, partial sequence #:R.solana.4:atcc: #:R.solana.4:acs:AF012419 #:R.solana.4:auth:Wullings,B.A., Van Beuningen,A.R., Janse,J.D. and Akkermans,A #:R.solana.4:title:FISH detection of the brownrot causing Ralstonia Solanacearum #:R.solana.4:jour:Unpublished #:R.solana.4:who: #:R.solana.4:date:02-JAN-1998 #:R.solana.4:rem:ref:1 (bases 1 to 2816) #:R.solana.4:rem:ref:2 (bases 1 to 2816) #:R.solana.4:rem:auth:Wullings,B.A. #:R.solana.4:rem:jour:Submitted (07-JUL-1997) Microbiology, Wageningen #:R.solana.4:rem:: Agricultural University, Hesselink van Suchtelenweg 4, #:R.solana.4:rem:: Wageningen, - 6703 CT, The Netherlands #:R.solana.4:rem:title:Direct Submission #:R.solana.4:rem:KEYWORDS:. #:R.solana.4:rem:GenBank ACCESSION:AF0124 9 #:R.solana.5:auth:.D.L. #:R.solana.5:title:using 23S rRNA-targeted probes #:R.solana.5:name:Ralstonia solanacearum. #:R.solana.5:subsp: #:R.solana.5:strain:PD2762 23S ribosomal RNA gene, partial sequence #:R.solana.5:atcc: #:R.solana.5:acs:AF012420 #:R.solana.5:auth:Wullings,B.A., Van Beuningen,A.R., Janse,J.D. and Akkermans,A #:R.solana.5:title:FISH detection of the brownrot causing Ralstonia Solanacearum #:R.solana.5:jour:Unpublished #:R.solana.5:who: #:R.solana.5:date:02-JAN-1998 #:R.solana.5:rem:ref:1 (bases 1 to 2816) #:R.solana.5:rem:ref:2 (bases 1 to 2816) #:R.solana.5:rem:auth:Wullings,B.A. #:R.solana.5:rem:jour:Submitted (07-JUL-1997) Microbiology, Wageningen #:R.solana.5:rem:: Agricultural University, Hesselink van Suchtelenweg 4, #:R.solana.5:rem:: Wageningen, - 6703 CT, The Netherlands #:R.solana.5:rem:title:Direct Submission #:R.solana.5:rem:KEYWORDS:. #:R.solana.5:rem:GenBank ACCESSION:AF0124 0 #:B.mallei:name:Burkholderia mallei. #:B.mallei:subsp: #:B.mallei:strain: #:B.mallei:atcc: #:B.mallei:acs:Y17183 #:B.mallei:auth:Schneider,I. #:B.mallei:title:mallei and Burkholderia pseudomallei #:B.mallei:jour:J. Clin. Microbiol. 36 (9), 2737-2741 (1998) #:B.mallei:who: #:B.mallei:date:29-SEP-1998 #:B.mallei:auth:Bauernfeind,A., Roller,C., Meyer,D., Jungwirth,R. and #:B.mallei:title:Molecular procedure for rapid detection of Burkholderia #:B.mallei:rem:ref:1 (bases 1 to 2882) #:B.mallei:rem:ref:2 (bases 1 to 2882) #:B.mallei:rem:auth:Bauernfeind,A. #:B.mallei:rem:jour:Submitted (24-APR-1998) A. Bauernfeind, #:B.mallei:rem:: Max-von-Pettenkofer-Inst.d. LMU Muenchen, Pettenkoferstr. #:B.mallei:rem:: 9a, D- 80336 Muenchen, FRG #:B.mallei:rem:title:Direct Submission #:B.mallei:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:B.mallei:rem:GenBank ACCESSION:Y17183 #:B.pseudoma:auth:Bauernfeind,A., Roller,C., Meyer,D., Jungwirth,R. and #:B.pseudoma:title:Molecular procedure for rapid detection of Burkholderia #:B.pseudoma:name:Burkholderia pseudomallei. #:B.pseudoma:subsp: #:B.pseudoma:strain: #:B.pseudoma:atcc: #:B.pseudoma:acs:Y17184 #:B.pseudoma:auth:Schneider,I. #:B.pseudoma:title:mallei and Burkholderia pseudomallei #:B.pseudoma:jour:J. Clin. Microbiol. 36 (9), 2737-2741 (1998) #:B.pseudoma:who: #:B.pseudoma:date:29-SEP-1998 #:B.pseudoma:rem:ref:1 (bases 1 to 2882) #:B.pseudoma:rem:ref:2 (bases 1 to 2882) #:B.pseudoma:rem:auth:Bauernfeind,A. #:B.pseudoma:rem:jour:Submitted (24-APR-1998) A. Bauernfeind, #:B.pseudoma:rem:: Max-von-Pettenkofer-Inst.d. LMU Muenchen, Pettenkoferstr. #:B.pseudoma:rem:: 9a, D- 80336 Muenchen, FRG #:B.pseudoma:rem:title:Direct Submission #:B.pseudoma:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:B.pseudoma:rem:GenBank ACCESSION:Y17184 #:B.gladioli:name:Burkholderia gladioli. #:B.gladioli:subsp: #:B.gladioli:strain: #:B.gladioli:atcc: #:B.gladioli:acs:Y17182 #:B.gladioli:auth:Bauernfeind,A., Schneider,I., Jungwirth,R. and Roller,C. #:B.gladioli:title:by PCR #:B.gladioli:jour:J. Clin. Microbiol. 36 (9), 2748-2751 (1998) #:B.gladioli:who: #:B.gladioli:date:24-AUG-1998 #:B.gladioli:title:Discrimination of burkholderia gladioli from other #:B.gladioli:title:burkholderia species detectable in cystic fibrosis patients #:B.gladioli:rem:ref:1 (bases 1 to 2880) #:B.gladioli:rem:ref:2 (bases 1 to 2880) #:B.gladioli:rem:auth:Bauernfeind,A. #:B.gladioli:rem:jour:Submitted (24-APR-1998) A. Bauernfeind, #:B.gladioli:rem:: Max-von-Pettenkofer-Inst.d. LMU Muenchen, Pettenkoferstr. #:B.gladioli:rem:: 9a, D- 80336 Muenchen, FRG #:B.gladioli:rem:title:Direct Submission #:B.gladioli:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:B.gladioli:rem:GenBank ACCESSION:Y17182 #:A.faecalis:name:Alcaligenes faecalis. #:A.faecalis:subsp: #:A.faecalis:strain: #:A.faecalis:atcc: #:A.faecalis:acs:X87282 #:A.faecalis:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:A.faecalis:title:Comparative sequence analysis of 23S rRNA from #:A.faecalis:jour:Unpublished #:A.faecalis:who: #:A.faecalis:date:03-JUL-1997 #:A.faecalis:auth:,R., Weizenegger,M. and Schleifer,K.H. #:A.faecalis:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:A.faecalis:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:A.faecalis:title:proteobacteria #:A.faecalis:rem:ref:1 (bases 1 to 2896) #:A.faecalis:rem:ref:2 (bases 1 to 2896) #:A.faecalis:rem:auth:Ludwig,W. #:A.faecalis:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:A.faecalis:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:A.faecalis:rem:: FRG #:A.faecalis:rem:title:Direct Submission #:A.faecalis:rem:ref:3 (bases 1 to 2896) #:A.faecalis:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:A.faecalis:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:A.faecalis:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:A.faecalis:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:A.faecalis:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:A.faecalis:rem:title:Comparative sequence analysis of 23S rRNA from #:A.faecalis:rem:: proteobacteria #:A.faecalis:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:A.faecalis:rem:GenBank ACCESSION:X87282 #:B.avium:name:Bordetella avium #:B.avium:subsp: #:B.avium:strain: #:B.avium:atcc: #:B.avium:acs:X70370 #:B.avium:auth: #:B.avium:title: #:B.avium:jour: #:B.avium:who: #:B.avium:date: #:B.avium:rem:ID BA23SRRA standard; DNA; PRO; 2867 BP. #:B.avium:rem:XX #:B.avium:rem:AC X70370; #:B.avium:rem:XX #:B.avium:rem:DT 23-FEB-1993 (Rel. 35, Created) #:B.avium:rem:DT 23-FEB-1993 (Rel. 35, Last updated, Version 1) #:B.avium:rem:XX #:B.avium:rem:DE B.avium gene for 23S rRNA #:B.avium:rem:XX #:B.avium:rem:KW 23S ribosomal RNA. #:B.avium:rem:XX #:B.avium:rem:OS Bordetella avium #:B.avium:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:B.avium:rem:OC Aerobic rods and cocci; Alcaligenaceae. #:B.avium:rem:XX #:B.avium:rem:RN [1] #:B.avium:rem:RA Mueller M.; #:B.avium:rem:RT ; #:B.avium:rem:RL Unpublished. #:B.avium:rem:XX #:B.avium:rem:RN [2] #:B.avium:rem:RP 1-2867 #:B.avium:rem:RA Mueller M.; #:B.avium:rem:RT ; #:B.avium:rem:RL Submitted (09-FEB-1993) on tape to the EMBL Data Library by: #:B.avium:rem:RL M. Mueller, University of Bremen, Dept. of Biology, FB2, AG #:B.avium:rem:RL Hildebrandt, D-2800 Bremen 33, FRG #:B.avium:rem:XX #:B.avium:rem:CC *source: tissue_library=ATCC 35086; #:B.avium:rem:XX #:B.avium:rem:FH Key Location/Qualifiers #:B.avium:rem:FH #:B.avium:rem:XX #:B.avium:rem:SQ Sequence 2867 BP; 753 A; 621 C; 889 G; 603 T; 1 other; #:B.bronchis:name:Bordetella bronchiseptica #:B.bronchis:subsp: #:B.bronchis:strain: #:B.bronchis:atcc: #:B.bronchis:acs:X70371 #:B.bronchis:auth: #:B.bronchis:title: #:B.bronchis:jour: #:B.bronchis:who: #:B.bronchis:date: #:B.bronchis:rem:ID BB23SRRA standard; DNA; PRO; 2880 BP. #:B.bronchis:rem:XX #:B.bronchis:rem:AC X70371; #:B.bronchis:rem:XX #:B.bronchis:rem:DT 23-FEB-1993 (Rel. 35, Created) #:B.bronchis:rem:DT 23-FEB-1993 (Rel. 35, Last updated, Version 1) #:B.bronchis:rem:XX #:B.bronchis:rem:DE B.bronchiseptica gene for 23S rRNA #:B.bronchis:rem:XX #:B.bronchis:rem:KW 23S ribosomal RNA. #:B.bronchis:rem:XX #:B.bronchis:rem:OS Bordetella bronchiseptica #:B.bronchis:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:B.bronchis:rem:OC Aerobic rods and cocci; Alcaligenaceae. #:B.bronchis:rem:XX #:B.bronchis:rem:RN [1] #:B.bronchis:rem:RA Mueller M.; #:B.bronchis:rem:RT ; #:B.bronchis:rem:RL Unpublished. #:B.bronchis:rem:XX #:B.bronchis:rem:RN [2] #:B.bronchis:rem:RP 1-2880 #:B.bronchis:rem:RA Mueller M.; #:B.bronchis:rem:RT ; #:B.bronchis:rem:RL Submitted (09-FEB-1993) on tape to the EMBL Data Library by: #:B.bronchis:rem:RL M. Mueller, University of Bremen, Dept. of Biology, FB2, AG #:B.bronchis:rem:RL Hildebrandt, D-2800 Bremen 33, FRG #:B.bronchis:rem:XX #:B.bronchis:rem:CC *source: tissue_library=ATCC 19395; #:B.bronchis:rem:XX #:B.bronchis:rem:FH Key Location/Qualifiers #:B.bronchis:rem:FH #:B.bronchis:rem:XX #:B.bronchis:rem:SQ Sequence 2880 BP; 761 A; 628 C; 900 G; 590 T; 1 other; #:B.parapert:name:Bordetella parapertussis #:B.parapert:subsp: #:B.parapert:strain: #:B.parapert:atcc: #:B.parapert:acs:X68368 #:B.parapert:auth: #:B.parapert:title: #:B.parapert:jour: #:B.parapert:who: #:B.parapert:date: #:B.parapert:rem:ID BP23SRRA standard; DNA; PRO; 3013 BP. #:B.parapert:rem:XX #:B.parapert:rem:AC X68368; #:B.parapert:rem:XX #:B.parapert:rem:DT 14-OCT-12 (Rel. 33, Created) #:B.parapert:rem:DT 14-OCT-1992 (Rel. 33, Last updated, Version 1) #:B.parapert:rem:XX #:B.parapert:rem:DE B.parapertussis gene for 23S ribosomal RNA #:B.parapert:rem:XX #:B.parapert:rem:KW 23S ribosomal RNA. #:B.parapert:rem:XX #:B.parapert:rem:OS Bordetella parapertussis #:B.parapert:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:B.parapert:rem:OC Aerobic rods and cocci; Alcaligenaceae. #:B.parapert:rem:XX #:B.parapert:rem:RN [1] #:B.parapert:rem:RP 1-3013 #:B.parapert:rem:RA Mueller M.; #:B.parapert:rem:RT ; #:B.parapert:rem:RL Submitted (22-SEP-1992) on tape to the EMBL Data Library by: #:B.parapert:rem:RL M. Mueller, University of Bremen, Dept of Biology, FB2 AG #:B.parapert:rem:RL Hildebrandt, 2800 Bremen 33, FRG #:B.parapert:rem:XX #:B.parapert:rem:RN [2] #:B.parapert:rem:RP 1-3013 #:B.parapert:rem:RA Mueller M.; #:B.parapert:rem:RT ; #:B.parapert:rem:RL Unpublished. #:B.parapert:rem:XX #:B.parapert:rem:CC *source: tissue_library=ATCC 15311; #:B.parapert:rem:XX #:B.parapert:rem:FH Key Location/Qualifiers #:B.parapert:rem:FH #:B.parapert:rem:FT rRNA <1..>3013 #:B.parapert:rem:FT /gene="23S rRNA" /product="23S ribosomal RNA" #:B.parapert:rem:XX #:B.parapert:rem:SQ Sequence 3013 BP; 796 A; 672 C; 927 G; 616 T; 2 other; #:B.pertussi:name:Bordetella pertussis #:B.pertussi:subsp: #:B.pertussi:strain: #:B.pertussi:atcc: #:B.pertussi:acs:X68323 #:B.pertussi:auth: #:B.pertussi:title: #:B.pertussi:jour: #:B.pertussi:who: #:B.pertussi:date: #:B.pertussi:rem:ID BPG23S standard; DNA; PRO; 3009 BP. #:B.pertussi:rem:XX #:B.pertussi:rem:AC X68323; #:B.pertussi:rem:XX #:B.pertussi:rem:DT 22-SEP-1992 (Rel. 33, Created) #:B.pertussi:rem:DT 22-SEP-1992 (Rel. 33, Last updated, Version 1) #:B.pertussi:rem:XX #:B.pertussi:rem:DE B.pertussis gene for 23S ribosomal RNA #:B.pertussi:rem:XX #:B.pertussi:rem:KW 23S ribosomal RNA. #:B.pertussi:rem:XX #:B.pertussi:rem:OS Bordetella pertussis #:B.pertussi:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:B.pertussi:rem:OC Aerobic rods and cocci; Alcaligenaceae. #:B.pertussi:rem:XX #:B.pertussi:rem:RN [1] #:B.pertussi:rem:RP 1-3009 #:B.pertussi:rem:RA Mueller M.; #:B.pertussi:rem:RT ; #:B.pertussi:rem:RL Submitted (10-SEP-1992) on tape to the EMBL Data Library by: #:B.pertussi:rem:RL M. Mueller, Dept of Biology, FB2 AG Hildelbrandt, University of #:B.pertussi:rem:RL Bremen, D-2800 Bremen 33, FRG #:B.pertussi:rem:XX #:B.pertussi:rem:RN [2] #:B.pertussi:rem:RP 1-3009 #:B.pertussi:rem:RA Mueller M.; #:B.pertussi:rem:RT ; #:B.pertussi:rem:RL Unpublished. #:B.pertussi:rem:XX #:B.pertussi:rem:CC *source: strain=Tohama; #:B.pertussi:rem:XX #:B.pertussi:rem:FH Key Location/Qualifiers #:B.pertussi:rem:FH #:B.pertussi:rem:FT rRNA 1..3009 #:B.pertussi:rem:FT /product="23S ribosomal RNA" #:B.pertussi:rem:XX #:B.pertussi:rem:SQ Sequence 3009 BP; 793 A; 669 C; 927 G; 618 T; 2 other; #:T.ferrooxi:name:Thiobacillus ferrooxidans #:T.ferrooxi:subsp: #:T.ferrooxi:strain: #:T.ferrooxi:atcc: #:T.ferrooxi:acs:U18089 #:T.ferrooxi:auth: #:T.ferrooxi:title: #:T.ferrooxi:jour: #:T.ferrooxi:who: #:T.ferrooxi:date: #:T.ferrooxi:rem:LOCUS TFU18089 4415 bp DNA BCT 28-DEC-1994 #:T.ferrooxi:rem:DEFINITION Thiobacillus ferrooxidans 16S rRNA gene, partial sequence, 23S and #:T.ferrooxi:rem: 5S rRNA genes, complete sequence, and Ile-tRNA and Ala-tRNA #:T.ferrooxi:rem: sequences. #:T.ferrooxi:rem:ACCESSION U18089 #:T.ferrooxi:rem:KEYWORDS . #:T.ferrooxi:rem:SOURCE Thiobacillus ferrooxidans. #:T.ferrooxi:rem: ORGANISM Thiobacillus ferrooxidans #:T.ferrooxi:rem: Eubacteria; Proteobacteria; gamma subdivision. #:T.ferrooxi:rem:REFERENCE 1 (bases 1 to 4415) #:T.ferrooxi:rem: AUTHORS Flores-Rozas,H., Sanchez,H., Alvarado-Urbina,G. and Venegas,A. #:T.ferrooxi:rem: TITLE Sequences of the 23S and 5S rRNA genes of a Thiobacillus #:T.ferrooxi:rem: ferrooxidans rRNA operon #:T.ferrooxi:rem: JOURNAL Unpublished #:T.ferrooxi:rem: STANDARD full automatic #:T.ferrooxi:rem:REFERENCE 2 (bases 1 to 4415) #:T.ferrooxi:rem: AUTHORS Flores-Rozas,H.A. #:T.ferrooxi:rem: TITLE Direct Submission #:T.ferrooxi:rem: JOURNAL Submitted (03-DEC-1994) Hernan A. Flores-Rozas, Molecular Biology, #:T.ferrooxi:rem: Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA #:T.ferrooxi:rem: STANDARD full automatic #:T.ferrooxi:rem:COMMENT #:T.ferrooxi:rem: NCBI gi: 604373 #:T.ferrooxi:rem:FEATURES Location/Qualifiers #:T.ferrooxi:rem: source 1..4415 #:T.ferrooxi:rem: /clone="ptTF92" #:T.ferrooxi:rem: /strain="A4" #:T.ferrooxi:rem: /organism="Thiobacillus ferrooxidans" #:T.ferrooxi:rem: rRNA <1..96 #:T.ferrooxi:rem: /note="rRNA16S" #:T.ferrooxi:rem: /product="16S ribosomal RNA" #:T.ferrooxi:rem: misc_feature 97..141 #:T.ferrooxi:rem: /note="intergenic sequence between 16S rRNA gene and #:T.ferrooxi:rem: tRNA1" #:T.ferrooxi:rem: tRNA 142..218 #:T.ferrooxi:rem: /note="tRNA1" #:T.ferrooxi:rem: /product="Ile-tRNA" #:T.ferrooxi:rem: tRNA 221..296 #:T.ferrooxi:rem: /note="tRNA2" #:T.ferrooxi:rem: /product="Ala-tRNA" #:T.ferrooxi:rem: misc_feature 297..532 #:T.ferrooxi:rem: /note="intergenic sequence between tRNA2 and 23S rRNA #:T.ferrooxi:rem: gene" #:T.ferrooxi:rem: rRNA 533..3398 #:T.ferrooxi:rem: /note="rRNA23S" #:T.ferrooxi:rem: /product="23S ribosomal RNA" #:T.ferrooxi:rem: misc_feature 3399..3482 #:T.ferrooxi:rem: /note="intergenic sequence between 23S and 5S rRNA genes" #:T.ferrooxi:rem: rRNA 3483..3600 #:T.ferrooxi:rem: /note="rRNA5S" #:T.ferrooxi:rem: /product="5S ribosomal RNA" #:T.ferrooxi:rem: misc_feature 3601..3612 #:T.ferrooxi:rem: /note="intergenic sequence between 5S rRNA gene and #:T.ferrooxi:rem: transcription terminator" #:T.ferrooxi:rem: terminator 3613..3653 #:T.ferrooxi:rem: /note="putative rho independent transcription terminator" #:T.ferrooxi:rem:BASE COUNT 1088 a 1062 c 1361 g 904 t #:T.ferrooxi:rem:ORIGIN #:X.fragaria:title:Fe(II)-oxidizing bacteria using DGGE and whole-cell #:X.fragaria:title:hybridization #:X.fragaria:name:Xanthomonas fragariae. #:X.fragaria:subsp: #:X.fragaria:strain: #:X.fragaria:atcc: #:X.fragaria:acs:U60338 #:X.fragaria:auth:Buchholz-Cleven,B.E.E., Rattunde,B. and Straub,K.L. #:X.fragaria:title:Screening for genetic diversity of isolates of anaerobic #:X.fragaria:jour:Unpublished #:X.fragaria:who: #:X.fragaria:date:30-MAR-1997 #:X.fragaria:rem:ref:1 (bases 1 to 791) #:X.fragaria:rem:ref:2 (bases 1 to 791) #:X.fragaria:rem:auth:Buchholz-Cleven,B.E.E., Rattunde,B. and Straub,K.L. #:X.fragaria:rem:jour:Submitted (11-JUN-1996) Molecular Ecology, #:X.fragaria:rem:: Max-Planck-Institute, Celsiusstr. 1, Bremen 28359, Germany #:X.fragaria:rem:title:Direct Submission #:X.fragaria:rem:KEYWORDS:. #:X.fragaria:rem:GenBank ACCESSION:U60338 #:T.cuprin.1:name:Thiomonas cuprina. #:T.cuprin.1:subsp: #:T.cuprin.1:strain: #:T.cuprin.1:atcc: #:T.cuprin.1:acs:X75567 #:T.cuprin.1:auth: #:T.cuprin.1:title: #:T.cuprin.1:jour: #:T.cuprin.1:who: #:T.cuprin.1:date: #:T.cuprin.1:rem:ID TCRNA23S standard; DNA; PRO; 2858 BP. #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:AC X75567; #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:DT 30-NOV-1994 (Rel. 41, Created) #:T.cuprin.1:rem:DT 30-NOV-1994 (Rel. 41, Last updated, Version 2) #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:DE T.cuprinus gene for 23S ribosomal RNA #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:KW 23S ribosomal RNA. #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:OS Thiobacillus cuprinus #:T.cuprin.1:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:T.cuprin.1:rem:OC Aerobic chemolithotrophic bacteria; Colorless sulfur bacteria. #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:RN [1] #:T.cuprin.1:rem:RA Moreira D., Amils R., Marin I.; #:T.cuprin.1:rem:RT "Complete primary structure of the 23S rRNA gene from Thiobacilus #:T.cuprin.1:rem:RT cuprinus and its similarity with that of Burkholderia cepaci"; #:T.cuprin.1:rem:RL Syst. Appl. Microbiol. 0:0-0(0). #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:RN [2] #:T.cuprin.1:rem:RP 1-2858 #:T.cuprin.1:rem:RA Moreira D.; #:T.cuprin.1:rem:RT ; #:T.cuprin.1:rem:RL Submitted (02-NOV-1993) to the EMBL/GenBank/DDBJ databases. #:T.cuprin.1:rem:RL D. Moreira, Centro de Biol. Molecular 'Severo Ochoa', Facultad de #:T.cuprin.1:rem:RL Biologie, Universidad Autonoma de Madrid, 28049 Madrid, SPAIN #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:FH Key Location/Qualifiers #:T.cuprin.1:rem:FH #:T.cuprin.1:rem:FT source 1..2858 #:T.cuprin.1:rem:FT /organism="Thiobacillus cuprinus" #:T.cuprin.1:rem:FT /strain="DSM5495" #:T.cuprin.1:rem:FT rRNA 1..2858 #:T.cuprin.1:rem:FT /gene="23S-RRNA" #:T.cuprin.1:rem:FT /product="23S ribosomal RNA" #:T.cuprin.1:rem:XX #:T.cuprin.1:rem:SQ Sequence 2858 BP; 761 A; 622 C; 870 G; 605 T; 0 other; #:T.cuprin.2:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:T.cuprin.2:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:T.cuprin.2:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:T.cuprin.2:title:Comparative sequence analysis of 23S rRNA from #:T.cuprin.2:name:Thiomonas cuprina #:T.cuprin.2:subsp: #:T.cuprin.2:strain: #:T.cuprin.2:atcc: #:T.cuprin.2:acs:X87292 #:T.cuprin.2:auth:,R., Weizenegger,M. and Schleifer,K.H. #:T.cuprin.2:title:proteobacteria #:T.cuprin.2:jour:Unpublished #:T.cuprin.2:who: #:T.cuprin.2:date:03-JUL-1997 #:T.cuprin.2:rem:ref:1 (bases 1 to 2877) #:T.cuprin.2:rem:ref:2 (bases 1 to 2877) #:T.cuprin.2:rem:auth:Ludwig,W. #:T.cuprin.2:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:T.cuprin.2:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:T.cuprin.2:rem:: FRG #:T.cuprin.2:rem:title:Direct Submission #:T.cuprin.2:rem:ref:3 (bases 1 to 2877) #:T.cuprin.2:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:T.cuprin.2:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:T.cuprin.2:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:T.cuprin.2:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:T.cuprin.2:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:T.cuprin.2:rem:title:Comparative sequence analysis of 23S rRNA from #:T.cuprin.2:rem:: proteobacteria #:T.cuprin.2:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:T.cuprin.2:rem:GenBank ACCESSION:X87292 #:M.bispor.1:title:The actinomycete Thermobispora bispora contains two distinct #:M.bispor.1:name:Microbispora bispora. #:M.bispor.1:subsp: #:M.bispor.1:strain: #:M.bispor.1:atcc: #:M.bispor.1:acs:U83912,U83911 #:M.bispor.1:auth:Wang,Y., Zhang,Z. and Ramanan,N. #:M.bispor.1:title:types of transcriptionally active 16S rRNA genes #:M.bispor.1:jour:J. Bacteriol. 179, 3270-3276 (1997) #:M.bispor.1:who: #:M.bispor.1:date:30-JUN-1997 #:M.bispor.1:rem:ref:1 (bases 1 to 5386) #:M.bispor.1:rem:ref:2 (bases 1 to 5386) #:M.bispor.1:rem:auth:Wang,Y. #:M.bispor.1:rem:jour:Thesis (1997) Institute of Molecular and Cell Biology, #:M.bispor.1:rem:: National University of Singapore #:M.bispor.1:rem:title:Heterogeneity of rRNA genes in T. bispora #:M.bispor.1:rem:ref:3 (bases 1 to 5386) #:M.bispor.1:rem:auth:Wang,Y. #:M.bispor.1:rem:jour:Submitted (07-JAN-1997) Institute of Molecular and Cell #:M.bispor.1:rem:: Biology, National University of Singapore, 10 Kent Ridge #:M.bispor.1:rem:: Crescent, Singapore 119260, Singapore #:M.bispor.1:rem:title:Direct Submission #:M.bispor.1:rem:KEYWORDS:. #:M.bispor.1:rem:GenBank ACCESSION:U83912 #:M.bispor.2:title:types of transcriptionally active 16S rRNA genes #:M.bispor.2:name:Microbispora bispora. #:M.bispor.2:subsp: #:M.bispor.2:strain: #:M.bispor.2:atcc: #:M.bispor.2:acs:U83909 #:M.bispor.2:auth:Wang,Y., Zhang,Z. and Ramanan,N. #:M.bispor.2:title:The actinomycete Thermobispora bispora contains two distinct #:M.bispor.2:jour:J. Bacteriol. 179, 3270-3276 (1997) #:M.bispor.2:who: #:M.bispor.2:date:30-JUN-1997 #:M.bispor.2:rem:ref:1 (bases 1 to 5153) #:M.bispor.2:rem:ref:2 (bases 1 to 5153) #:M.bispor.2:rem:auth:Wang,Y. #:M.bispor.2:rem:jour:Thesis (1997) Institute of Molecular and Cell Biology, #:M.bispor.2:rem:: National University of Singapore #:M.bispor.2:rem:title:Heterogeneity of rRNA genes in T. bispora #:M.bispor.2:rem:ref:3 (bases 1 to 5153) #:M.bispor.2:rem:auth:Wang,Y. #:M.bispor.2:rem:jour:Submitted (07-JAN-1997) Institute of Molecular and Cell #:M.bispor.2:rem:: Biology, National University of Singapore, 10 Kent Ridge #:M.bispor.2:rem:: Crescent, Singapore 119260, Singapore #:M.bispor.2:rem:title:Direct Submission #:M.bispor.2:rem:KEYWORDS:. #:M.bispor.2:rem:GenBank ACCESSION:U83909 #:PURPLE.GAM:name:PROTEOBACTERIA - GAMMA SUBDIVISION #:PURPLE.GAM:subsp: #:PURPLE.GAM:strain: #:PURPLE.GAM:atcc: #:PURPLE.GAM:acs:DIVIDER #:PURPLE.GAM:auth: #:PURPLE.GAM:title: #:PURPLE.GAM:jour: #:PURPLE.GAM:who:Robin Gutell,MCDB-256,28595,7868901 #:PURPLE.GAM:date:Fri Dec 17 13:14:43 1993 #:L.mucor:name:Leucothrix mucor. #:L.mucor:subsp: #:L.mucor:strain: #:L.mucor:atcc: #:L.mucor:acs:X87285 #:L.mucor:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:L.mucor:title:Comparative sequence analysis of 23S rRNA from #:L.mucor:jour:Unpublished #:L.mucor:who: #:L.mucor:date:03-JUL-1997 #:L.mucor:auth:,R., Weizenegger,M. and Schleifer,K.H. #:L.mucor:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:L.mucor:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:L.mucor:title:proteobacteria #:L.mucor:rem:ref:1 (bases 1 to 2883) #:L.mucor:rem:ref:2 (bases 1 to 2883) #:L.mucor:rem:auth:Ludwig,W. #:L.mucor:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:L.mucor:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:L.mucor:rem:: FRG #:L.mucor:rem:title:Direct Submission #:L.mucor:rem:ref:3 (bases 1 to 2883) #:L.mucor:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:L.mucor:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:L.mucor:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:L.mucor:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:L.mucor:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:L.mucor:rem:title:Comparative sequence analysis of 23S rRNA from #:L.mucor:rem:: proteobacteria #:L.mucor:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.mucor:rem:GenBank ACCESSION:X87285 #:C.burnetii:name:Coxiella burnetii #:C.burnetii:subsp: #:C.burnetii:strain: #:C.burnetii:atcc: #:C.burnetii:acs:X79704 #:C.burnetii:auth:Afseth,G., Mo,Y. and Mallavia,L.P. #:C.burnetii:title: #:C.burnetii:jour: #:C.burnetii:who: #:C.burnetii:date: #:C.burnetii:rem:LOCUS CB23SRR 3509 bp DNA BCT 13-JUN-1994 #:C.burnetii:rem:DEFINITION C.burnetii 23Sr RNA gene #:C.burnetii:rem:ACCESSION X79704 #:C.burnetii:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene. #:C.burnetii:rem:SOURCE Coxiella burnetii #:C.burnetii:rem: ORGANISM Coxiella burnetii #:C.burnetii:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Rickettsias and #:C.burnetii:rem: Chlamydias; Rickettsiales; Rickettsiaceae. #:C.burnetii:rem:REFERENCE 1 (bases 1 to 3509) #:C.burnetii:rem: AUTHORS Afseth,G., Mo,Y. and Mallavia,L.P. #:C.burnetii:rem: TITLE Identification of an IVS in the 23S rRNA gene of C. burnetii #:C.burnetii:rem: JOURNAL Unpublished #:C.burnetii:rem: STANDARD full automatic #:C.burnetii:rem:REFERENCE 2 (bases 1 to 3509) #:C.burnetii:rem: AUTHORS Afseth,G. #:C.burnetii:rem: JOURNAL Submitted (13-JUN-1994) to the EMBL/GenBank/DDBJ databases. G. #:C.burnetii:rem: Afseth, Washington State University, Dept of Microbiology, Pullman, #:C.burnetii:rem: WA 99164-4233, USA #:C.burnetii:rem: STANDARD full automatic #:C.burnetii:rem:COMMENT #:C.burnetii:rem: NCBI gi: 499172 #:C.burnetii:rem:FEATURES Location/Qualifiers #:C.burnetii:rem: source 1..3509 #:C.burnetii:rem: /organism="Coxiella burnetii" #:C.burnetii:rem: /isolate="RSA 493" #:C.burnetii:rem: /note="Nine mile" #:C.burnetii:rem: rRNA 22..1174 #:C.burnetii:rem: /gene="23S rRNA" #:C.burnetii:rem: rRNA 1617..3347 #:C.burnetii:rem: /gene="23S rRNA" #:C.burnetii:rem: rRNA 3392..3509 #:C.burnetii:rem: /gene="5s rRNA" #:C.burnetii:rem: misc_feature 1175..1616 #:C.burnetii:rem: /note="intervening sequence" #:C.burnetii:rem: misc_feature 3348..3391 #:C.burnetii:rem: /note="23S-5S intergenic spacer" #:C.burnetii:rem: CDS 1206..1520 #:C.burnetii:rem: /note="NCBI gi: 499173" #:C.burnetii:rem: /codon_start=1 #:C.burnetii:rem: /translation="MKKEISSFEDLVVFQKAYKLSLKLHKLTLSMPKEEQYGLQAKSV #:C.burnetii:rem: KQETICANIAEGFGKQSVSTAEFKRFILIAMGSADEMRVWLRYCFDLGYLNEKTWVGL #:C.burnetii:rem: PQ" #:C.burnetii:rem:BASE COUNT 972 a 711 c 1001 g 825 t #:C.burnetii:rem:ORIGIN #:A.calcoace:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:A.calcoace:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:A.calcoace:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:A.calcoace:title:Comparative sequence analysis of 23S rRNA from #:A.calcoace:name:Acinetobacter calcoaceticus. #:A.calcoace:subsp: #:A.calcoace:strain: #:A.calcoace:atcc: #:A.calcoace:acs:X87280 #:A.calcoace:auth:,R., Weizenegger,M. and Schleifer,K.H. #:A.calcoace:title:proteobacteria #:A.calcoace:jour:Unpublished #:A.calcoace:who: #:A.calcoace:date:03-JUL-1997 #:A.calcoace:rem:ref:1 (bases 1 to 2903) #:A.calcoace:rem:ref:2 (bases 1 to 2903) #:A.calcoace:rem:auth:Ludwig,W. #:A.calcoace:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:A.calcoace:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:A.calcoace:rem:: FRG #:A.calcoace:rem:title:Direct Submission #:A.calcoace:rem:ref:3 (bases 1 to 2903) #:A.calcoace:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:A.calcoace:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:A.calcoace:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:A.calcoace:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:A.calcoace:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:A.calcoace:rem:title:Comparative sequence analysis of 23S rRNA from #:A.calcoace:rem:: proteobacteria #:A.calcoace:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:A.calcoace:rem:GenBank ACCESSION:X87280 #:P.stutze.1:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:P.stutze.1:auth:,R., Weizenegger,M. and Schleifer,K.H. #:P.stutze.1:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:P.stutze.1:title:Comparative sequence analysis of 23S rRNA from #:P.stutze.1:name:Pseudomonas stutzeri. #:P.stutze.1:subsp: #:P.stutze.1:strain: #:P.stutze.1:atcc: #:P.stutze.1:acs:X87289 #:P.stutze.1:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:P.stutze.1:title:proteobacteria #:P.stutze.1:jour:Unpublished #:P.stutze.1:who: #:P.stutze.1:date:03-JUL-1997 #:P.stutze.1:rem:ref:1 (bases 1 to 2900) #:P.stutze.1:rem:ref:2 (bases 1 to 2900) #:P.stutze.1:rem:auth:Ludwig,W. #:P.stutze.1:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:P.stutze.1:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:P.stutze.1:rem:: FRG #:P.stutze.1:rem:title:Direct Submission #:P.stutze.1:rem:ref:3 (bases 1 to 2900) #:P.stutze.1:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:P.stutze.1:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:P.stutze.1:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:P.stutze.1:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:P.stutze.1:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:P.stutze.1:rem:title:Comparative sequence analysis of 23S rRNA from #:P.stutze.1:rem:: proteobacteria #:P.stutze.1:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:P.stutze.1:rem:GenBank ACCESSION:X87289 #:P.stutze.2:name:Pseudomonas stutzeri. #:P.stutze.2:subsp: #:P.stutze.2:strain: #:P.stutze.2:atcc: #:P.stutze.2:acs:U65012 #:P.stutze.2:auth:Kerkhof,L. #:P.stutze.2:title:A ribosomal RNA operon from Pseudomonas stutzeri Zobell #:P.stutze.2:jour:Unpublished #:P.stutze.2:who: #:P.stutze.2:date:29-AUG-1996 #:P.stutze.2:rem:ref:1 (bases 1 to 5784) #:P.stutze.2:rem:ref:2 (bases 1 to 5784) #:P.stutze.2:rem:auth:Kerkhof,L. #:P.stutze.2:rem:jour:Submitted (24-JUL-1996) Inst. Mar. Coastal. Sci., Rutgers #:P.stutze.2:rem:: University, 15 Dudley Rd., New Brunswick, NJ 08903, USA #:P.stutze.2:rem:title:Direct Submission #:P.stutze.2:rem:KEYWORDS:. #:P.stutze.2:rem:GenBank ACCESSION:U65012 #:P.aerugino:name:Pseudomonas aeruginosa #:P.aerugino:subsp: #:P.aerugino:strain: #:P.aerugino:atcc:? #:P.aerugino:acs:Y00432 #:P.aerugino:auth: #:P.aerugino:title: #:P.aerugino:jour:7182 (1987) Toschka...Erdmann #:P.aerugino:who:Published #:P.aerugino:date:Thu Oct 8 11:27:52 1987 #:P.aerugino:rem:Phylo:Eubacteria,Purple,gamma,3 #:P.perfecto:name:Pseudomonas perfectomarina #:P.perfecto:subsp: #:P.perfecto:strain: #:P.perfecto:atcc: #:P.perfecto:acs:L03788 #:P.perfecto:auth: #:P.perfecto:title: #:P.perfecto:jour: #:P.perfecto:who: #:P.perfecto:date: #:P.perfecto:rem:ID PSRRNAPM standard; DNA; PRO; 2884 BP. #:P.perfecto:rem:XX #:P.perfecto:rem:AC L03788; #:P.perfecto:rem:XX #:P.perfecto:rem:DT 09-OCT-1992 (Rel. 33, Created) #:P.perfecto:rem:DT 09-OCT-1992 (Rel. 33, Last updated, Version 1) #:P.perfecto:rem:XX #:P.perfecto:rem:DE Pseudomonas perfectomarina 23S ribosomal RNA subunit gene. #:P.perfecto:rem:XX #:P.perfecto:rem:KW 23S large subunit ribosomal RNA; 23S ribosomal RNA. #:P.perfecto:rem:XX #:P.perfecto:rem:OS Pseudomonas stutzeri #:P.perfecto:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:P.perfecto:rem:OC Aerobic rods and cocci; Pseudomonadaceae. #:P.perfecto:rem:XX #:P.perfecto:rem:RN [1] #:P.perfecto:rem:RP 1-2884 #:P.perfecto:rem:RA Kerkhof L.J.; #:P.perfecto:rem:RT "A species-specific probe for the marine bacterium, Pseudomonas #:P.perfecto:rem:RT perfectomarina (P. stutzeri strain Zobell)"; #:P.perfecto:rem:RL Unpublished. #:P.perfecto:rem:XX #:P.perfecto:rem:FH Key Location/Qualifiers #:P.perfecto:rem:FH #:P.perfecto:rem:FT rRNA 1..2884 #:P.perfecto:rem:FT /note="23S ribosomal RNA subunit" #:P.perfecto:rem:XX #:P.perfecto:rem:SQ Sequence 2884 BP; 760 A; 609 C; 889 G; 619 T; 7 other; #:P.cepacia:name:Pseudomonas cepacia #:P.cepacia:subsp: #:P.cepacia:strain: #:P.cepacia:atcc: #:P.cepacia:acs:X16368 #:P.cepacia:auth:Ludwig,W. #:P.cepacia:title: #:P.cepacia:jour: #:P.cepacia:who: #:P.cepacia:date: #:P.cepacia:rem:LOCUS X16368 2878 bp UNA 15-SEP-1990 #:P.cepacia:rem:DEFINITION Pseudomonas cepacia gene for 23S ribosomal RNA. #:P.cepacia:rem:ACCESSION X16368 #:P.cepacia:rem:KEYWORDS . #:P.cepacia:rem:SOURCE #:P.cepacia:rem: ORGANISM Unknown #:P.cepacia:rem: Unclassified. #:P.cepacia:rem:REFERENCE 1 (bases 1 to 2878) #:P.cepacia:rem: AUTHORS Ludwig,W. #:P.cepacia:rem: JOURNAL Unpublished (1989) see COMMENT for author address #:P.cepacia:rem: STANDARD unannotated staff_entry #:P.cepacia:rem:REFERENCE 2 (bases 1 to 2878) #:P.cepacia:rem: AUTHORS Hoepfl,P., Ludwig,W., Schleifer,K.H. and Larsen,N. #:P.cepacia:rem: TITLE The 23S ribosomal RNA higher-order structure of Pseudomonas cepacia #:P.cepacia:rem: and other prokaryotes #:P.cepacia:rem: JOURNAL Eur. J. Biochem. 185, 355-364 (1989) #:P.cepacia:rem: STANDARD unannotated staff_entry #:P.cepacia:rem:BASE COUNT 747 a 624 c 900 g 607 t #:P.cepacia:rem:ORIGIN #:V.vulnif.1:name: #:V.vulnif.1:subsp: #:V.vulnif.1:strain: #:V.vulnif.1:atcc: #:V.vulnif.1:acs:U10951 #:V.vulnif.1:auth: #:V.vulnif.1:title: #:V.vulnif.1:jour: #:V.vulnif.1:who: #:V.vulnif.1:date: #:V.vulnif.1:rem:LOCUS VVU10951 1078 bp DNA BCT 01-JAN-1995 #:V.vulnif.1:rem:DEFINITION Vibrio vulnificus ATCC 27562 23S rRNA gene, partial sequence. #:V.vulnif.1:rem:ACCESSION U10951 #:V.vulnif.1:rem:KEYWORDS . #:V.vulnif.1:rem:SOURCE Vibrio vulnificus. #:V.vulnif.1:rem: ORGANISM Vibrio vulnificus #:V.vulnif.1:rem: Eubacteria; Proteobacteria; gamma subdivision; Vibrionaceae; #:V.vulnif.1:rem: Vibrio. #:V.vulnif.1:rem:REFERENCE 1 (bases 1 to 1078) #:V.vulnif.1:rem: AUTHORS Bennison,B.W., Reeves,R.H. and LaRock,P.A. #:V.vulnif.1:rem: TITLE Ribosomal DNA Probes for Vibrio Species #:V.vulnif.1:rem: JOURNAL Unpublished #:V.vulnif.1:rem: STANDARD full automatic #:V.vulnif.1:rem:REFERENCE 2 (bases 1 to 1078) #:V.vulnif.1:rem: AUTHORS Reeves,R.H. #:V.vulnif.1:rem: TITLE Direct Submission #:V.vulnif.1:rem: JOURNAL Submitted (16-JUN-1994) Robert H. Reeves, Florida State University, #:V.vulnif.1:rem: Department of Biological Science, Tallahassee, FL 32306-2043, USA #:V.vulnif.1:rem: STANDARD full automatic #:V.vulnif.1:rem:COMMENT #:V.vulnif.1:rem: NCBI gi: 606868 #:V.vulnif.1:rem:FEATURES Location/Qualifiers #:V.vulnif.1:rem: source 1..1078 #:V.vulnif.1:rem: /strain="ATCC 27562 (type strain)" #:V.vulnif.1:rem: /organism="Vibrio vulnificus" #:V.vulnif.1:rem: rRNA 1..>1078 #:V.vulnif.1:rem: /note="large subunit ribosomal RNA" #:V.vulnif.1:rem: /evidence=experimental #:V.vulnif.1:rem: /product="23S rRNA" #:V.vulnif.1:rem:BASE COUNT 311 a 225 c 302 g 223 t 17 others #:V.vulnif.1:rem:ORIGIN #:V.vulnif.2:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:V.vulnif.2:auth:,R., Weizenegger,M. and Schleifer,K.H. #:V.vulnif.2:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:V.vulnif.2:title:Comparative sequence analysis of 23S rRNA from #:V.vulnif.2:name:Vibrio vulnificus. #:V.vulnif.2:subsp: #:V.vulnif.2:strain: #:V.vulnif.2:atcc: #:V.vulnif.2:acs:X87293 #:V.vulnif.2:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:V.vulnif.2:title:proteobacteria #:V.vulnif.2:jour:Unpublished #:V.vulnif.2:who: #:V.vulnif.2:date:03-JUL-1997 #:V.vulnif.2:rem:ref:1 (bases 1 to 2888) #:V.vulnif.2:rem:ref:2 (bases 1 to 2888) #:V.vulnif.2:rem:auth:Ludwig,W. #:V.vulnif.2:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:V.vulnif.2:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:V.vulnif.2:rem:: FRG #:V.vulnif.2:rem:title:Direct Submission #:V.vulnif.2:rem:ref:3 (bases 1 to 2888) #:V.vulnif.2:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:V.vulnif.2:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:V.vulnif.2:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:V.vulnif.2:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:V.vulnif.2:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:V.vulnif.2:rem:title:Comparative sequence analysis of 23S rRNA from #:V.vulnif.2:rem:: proteobacteria #:V.vulnif.2:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:V.vulnif.2:rem:GenBank ACCESSION:X87293 #:V.vulnif.3:auth:,R., Weizenegger,M. and Schleifer,K.H. #:V.vulnif.3:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:V.vulnif.3:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:V.vulnif.3:title:proteobacteria #:V.vulnif.3:name:Vibrio vulnificus. #:V.vulnif.3:subsp: #:V.vulnif.3:strain: #:V.vulnif.3:atcc: #:V.vulnif.3:acs:X87294 #:V.vulnif.3:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:V.vulnif.3:title:Comparative sequence analysis of 23S rRNA from #:V.vulnif.3:jour:Unpublished #:V.vulnif.3:who: #:V.vulnif.3:date:03-JUL-1997 #:V.vulnif.3:rem:ref:1 (bases 1 to 2888) #:V.vulnif.3:rem:ref:2 (bases 1 to 2888) #:V.vulnif.3:rem:auth:Ludwig,W. #:V.vulnif.3:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:V.vulnif.3:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:V.vulnif.3:rem:: FRG #:V.vulnif.3:rem:title:Direct Submission #:V.vulnif.3:rem:ref:3 (bases 1 to 2888) #:V.vulnif.3:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:V.vulnif.3:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:V.vulnif.3:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:V.vulnif.3:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:V.vulnif.3:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:V.vulnif.3:rem:title:Comparative sequence analysis of 23S rRNA from #:V.vulnif.3:rem:: proteobacteria #:V.vulnif.3:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:V.vulnif.3:rem:GenBank ACCESSION:X87294 #:V.choler.1:name:Vibrio cholerae #:V.choler.1:subsp: #:V.choler.1:strain: #:V.choler.1:atcc: #:V.choler.1:acs:U10952 #:V.choler.1:auth:Bennison,B.W., Reeves,R.H. and LaRock,P.A #:V.choler.1:title: #:V.choler.1:jour: #:V.choler.1:who: #:V.choler.1:date: #:V.choler.1:rem:LOCUS VCU10952 1082 bp DNA BCT 01-JAN-1995 #:V.choler.1:rem:DEFINITION Vibrio cholerae ATCC 35971 23S rRNA gene, partial sequence. #:V.choler.1:rem:ACCESSION U10952 #:V.choler.1:rem:KEYWORDS . #:V.choler.1:rem:SOURCE Vibrio cholerae. #:V.choler.1:rem: ORGANISM Vibrio cholerae #:V.choler.1:rem: Eubacteria; Proteobacteria; gamma subdivision; Vibrionaceae; #:V.choler.1:rem: Vibrio. #:V.choler.1:rem:REFERENCE 1 (bases 1 to 1082) #:V.choler.1:rem: AUTHORS Bennison,B.W., Reeves,R.H. and LaRock,P.A. #:V.choler.1:rem: TITLE Ribosomal DNA Probes for Vibrio Species #:V.choler.1:rem: JOURNAL Unpublished #:V.choler.1:rem: STANDARD full automatic #:V.choler.1:rem:REFERENCE 2 (bases 1 to 1082) #:V.choler.1:rem: AUTHORS Reeves,R.H. #:V.choler.1:rem: TITLE Direct Submission #:V.choler.1:rem: JOURNAL Submitted (16-JUN-1994) Robert H. Reeves, Florida State University, #:V.choler.1:rem: Department of Biological Science, Tallahassee, FL 32306-2043, USA #:V.choler.1:rem: STANDARD full automatic #:V.choler.1:rem:COMMENT #:V.choler.1:rem: NCBI gi: 606869 #:V.choler.1:rem:FEATURES Location/Qualifiers #:V.choler.1:rem: source 1..1082 #:V.choler.1:rem: /strain="ATCC 35971" #:V.choler.1:rem: /organism="Vibrio cholerae" #:V.choler.1:rem: rRNA 1..>1082 #:V.choler.1:rem: /note="large subunit ribosomal RNA" #:V.choler.1:rem: /evidence=experimental #:V.choler.1:rem: /product="23S rRNA" #:V.choler.1:rem:BASE COUNT 262 a 212 c 285 g 188 t 135 others #:V.choler.1:rem:ORIGIN #:V.choler.2:name:Vibrio cholerae #:V.choler.2:subsp: #:V.choler.2:strain: #:V.choler.2:atcc: #:V.choler.2:acs:U10956 #:V.choler.2:auth:Bennison,B.W., Reeves,R.H. and LaRock,P.A. #:V.choler.2:title: #:V.choler.2:jour: #:V.choler.2:who: #:V.choler.2:date: #:V.choler.2:rem:LOCUS VCU10956 1077 bp DNA BCT 01-JAN-1995 #:V.choler.2:rem:DEFINITION Vibrio cholerae ATCC 14035 23S rRNA gene, partial sequence. #:V.choler.2:rem:ACCESSION U10956 #:V.choler.2:rem:KEYWORDS . #:V.choler.2:rem:SOURCE Vibrio cholerae. #:V.choler.2:rem: ORGANISM Vibrio cholerae #:V.choler.2:rem: Eubacteria; Proteobacteria; gamma subdivision; Vibrionaceae; #:V.choler.2:rem: Vibrio. #:V.choler.2:rem:REFERENCE 1 (bases 1 to 1077) #:V.choler.2:rem: AUTHORS Bennison,B.W., Reeves,R.H. and LaRock,P.A. #:V.choler.2:rem: TITLE Ribosomal DNA Probes for Vibrio Species #:V.choler.2:rem: JOURNAL Unpublished #:V.choler.2:rem: STANDARD full automatic #:V.choler.2:rem:REFERENCE 2 (bases 1 to 1077) #:V.choler.2:rem: AUTHORS Reeves,R.H. #:V.choler.2:rem: TITLE Direct Submission #:V.choler.2:rem: JOURNAL Submitted (16-JUN-1994) Robert H. Reeves, Florida State University, #:V.choler.2:rem: Department of Biological Science, Tallahassee, FL 32306-2043, USA #:V.choler.2:rem: STANDARD full automatic #:V.choler.2:rem:COMMENT #:V.choler.2:rem: NCBI gi: 606872 #:V.choler.2:rem:FEATURES Location/Qualifiers #:V.choler.2:rem: source 1..1077 #:V.choler.2:rem: /strain="ATCC 14035 (type strain)" #:V.choler.2:rem: /organism="Vibrio cholerae" #:V.choler.2:rem: rRNA 1..>1077 #:V.choler.2:rem: /note="large subunit ribosomal RNA" #:V.choler.2:rem: /evidence=experimental #:V.choler.2:rem: /product="23S rRNA" #:V.choler.2:rem:BASE COUNT 299 a 229 c 301 g 210 t 38 others #:V.choler.2:rem:ORIGIN #:R.amylophi:name:Ruminobacter amylophilus #:R.amylophi:subsp: #:R.amylophi:strain: #:R.amylophi:atcc: #:R.amylophi:acs:X06765 #:R.amylophi:auth: #:R.amylophi:title: #:R.amylophi:jour:Tue Apr 12 19:03:38 1988 #:R.amylophi:who:Robin Gutell #:R.amylophi:date:Tue Apr 12 19:03:38 1988 #:R.amylophi:rem:published in NAR 16:2345(1988)Spiegl H., Ludwig W., Schleifer K.H., #:R.amylophi:rem:Stackebrandt E. #:R.amylophi:rem:LOCUS RUARRN23S 2867 bp ss-mRNA BCT 30-SEP-1988 #:R.amylophi:rem:DEFINITION Ruminobacter amylophilus 23S rRNA. #:R.amylophi:rem:ACCESSION X06765 #:R.amylophi:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:R.amylophi:rem:SOURCE Ruminobacter amylophilus. #:R.amylophi:rem: ORGANISM Ruminobacter amylophilus #:R.amylophi:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Anaerobic #:R.amylophi:rem: gram-negative straight, curved and helical rods; Bacteroidaceae. #:R.amylophi:rem:REFERENCE 1 (bases 1 to 2867) #:R.amylophi:rem: AUTHORS Stackebrandt,E. #:R.amylophi:rem: JOURNAL Unpublished (1988) U of Kiel, Olshausenstr., 2800 Iel. #:R.amylophi:rem: STANDARD simple automatic #:R.amylophi:rem:REFERENCE 2 (bases 1 to 2867) #:R.amylophi:rem: AUTHORS Spiegl,H., Ludwig,W., Schleifer,K.M. and Stackenbrandt,E.U. #:R.amylophi:rem: JOURNAL Unpublished (1988) #:R.amylophi:rem: STANDARD simple automatic #:R.amylophi:rem:FEATURES Location/Qualifiers #:R.amylophi:rem: rRNA 1..2867 #:R.amylophi:rem: /note="23S rRNA" #:R.amylophi:rem:BASE COUNT 839 a 546 c 878 g 604 t #:R.amylophi:rem:ORIGIN #:R.amylophi:rem:Phylo:Eubacteria,Purple,gamma,3 #:A.hydrop.1:name:Aeromonas hydrophila #:A.hydrop.1:subsp: #:A.hydrop.1:strain:Purple, gamma #:A.hydrop.1:atcc: #:A.hydrop.1:acs:X67946 #:A.hydrop.1:auth: #:A.hydrop.1:title: #:A.hydrop.1:jour: #:A.hydrop.1:who: #:A.hydrop.1:date: #:A.hydrop.1:rem:ID AH23SRRN standard; DNA; PRO; 2743 BP. #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:AC X67946; #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:DT 16-FEB-1993 (Rel. 34, Created) #:A.hydrop.1:rem:DT 17-FEB-1993 (Rel. 34, Last updated, Version 3) #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:DE A.hydrophila rrn gene for 23S rRNA #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:KW 23S ribosomal RNA; ribosomal RNA. #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:OS Aeromonas hydrophila #:A.hydrop.1:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:A.hydrop.1:rem:OC Facultatively anaerobic rods; Vibrionaceae. #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:RN [1] #:A.hydrop.1:rem:RP 1-2743 #:A.hydrop.1:rem:RA East A.K.; #:A.hydrop.1:rem:RT ; #:A.hydrop.1:rem:RL Submitted (31-JUL-1992) on tape to the EMBL Data Library by: #:A.hydrop.1:rem:RL A.K. East, AFRC Inst. of Food Research, Reading Laboratory, #:A.hydrop.1:rem:RL Microbiology Dept., Earley Gate, Whiteknights Rd., Reading RG6 2EF, #:A.hydrop.1:rem:RL UK #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:RN [2] #:A.hydrop.1:rem:RP 1-2743 #:A.hydrop.1:rem:RA East A.K., Collins M.D.; #:A.hydrop.1:rem:RT "Molecular characterization of DNA encoding 23S rRNA and 16S-23S #:A.hydrop.1:rem:RT rRNA intergenic spacer regions of aeromonas hydrophila"; #:A.hydrop.1:rem:RL FEMS Microbiol. Lett. 106:129-134(1993). #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:CC *source: strain=ATCC 7966; #:A.hydrop.1:rem:CC *source: clone=pAEA3; #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:FH Key Location/Qualifiers #:A.hydrop.1:rem:FH #:A.hydrop.1:rem:FT rRNA 1..2743 #:A.hydrop.1:rem:FT /product="23S ribosomal RNA" #:A.hydrop.1:rem:XX #:A.hydrop.1:rem:SQ Sequence 2743 BP; 725 A; 604 C; 856 G; 558 T; 0 other; #:A.hydrop.2:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:A.hydrop.2:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:A.hydrop.2:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:A.hydrop.2:title:Comparative sequence analysis of 23S rRNA from #:A.hydrop.2:name:Aeromonas hydrophila. #:A.hydrop.2:subsp: #:A.hydrop.2:strain: #:A.hydrop.2:atcc: #:A.hydrop.2:acs:X87281 #:A.hydrop.2:auth:,R., Weizenegger,M. and Schleifer,K.H. #:A.hydrop.2:title:proteobacteria #:A.hydrop.2:jour:Unpublished #:A.hydrop.2:who: #:A.hydrop.2:date:03-JUL-1997 #:A.hydrop.2:rem:ref:1 (bases 1 to 2895) #:A.hydrop.2:rem:ref:2 (bases 1 to 2895) #:A.hydrop.2:rem:auth:Ludwig,W. #:A.hydrop.2:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:A.hydrop.2:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:A.hydrop.2:rem:: FRG #:A.hydrop.2:rem:title:Direct Submission #:A.hydrop.2:rem:ref:3 (bases 1 to 2895) #:A.hydrop.2:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:A.hydrop.2:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:A.hydrop.2:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:A.hydrop.2:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:A.hydrop.2:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:A.hydrop.2:rem:title:Comparative sequence analysis of 23S rRNA from #:A.hydrop.2:rem:: proteobacteria #:A.hydrop.2:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:A.hydrop.2:rem:GenBank ACCESSION:X87281 #:S.typhi:name:Salmonella typhi. #:S.typhi:subsp: #:S.typhi:strain: #:S.typhi:atcc: #:S.typhi:acs:U04734 #:S.typhi:auth:Zhu,Q., Lim,C.K. and Chan,Y.N. #:S.typhi:title:Detection of Salmonella typhi by polymerase chain reaction #:S.typhi:jour:J. Appl. Bacteriol. 80 (3), 244-251 (1996) #:S.typhi:who: #:S.typhi:date:30-MAY-1996 #:S.typhi:rem:LOCUS STU04734 2326 bp DNA BCT 30-MAY-1996 #:S.typhi:rem:DEFINITION Salmonella typhi Rawlings 5S ribosomal RNA gene, complete sequence #:S.typhi:rem: and 23S ribosomal RNA gene, partial sequence. #:S.typhi:rem:ACCESSION U04734 #:S.typhi:rem:NID g1335722 #:S.typhi:rem:KEYWORDS . #:S.typhi:rem:SOURCE Salmonella typhi. #:S.typhi:rem: ORGANISM Salmonella typhi #:S.typhi:rem: Eubacteria; Proteobacteria; gamma subdivision; Enterobacteriaceae; #:S.typhi:rem: Salmonella. #:S.typhi:rem:REFERENCE 1 (bases 1 to 2326) #:S.typhi:rem: AUTHORS Zhu,Q., Lim,C.K. and Chan,Y.N. #:S.typhi:rem: TITLE Detection of Salmonella typhi by polymerase chain reaction #:S.typhi:rem: JOURNAL J. Appl. Bacteriol. 80 (3), 244-251 (1996) #:S.typhi:rem: MEDLINE 97005372 #:S.typhi:rem:REFERENCE 2 (bases 1 to 2326) #:S.typhi:rem: AUTHORS Lim,C.-K. #:S.typhi:rem: TITLE Direct Submission #:S.typhi:rem: JOURNAL Submitted (27-DEC-1993) Dr. Chor-Kiang Lim, Dept. of Microbiology, #:S.typhi:rem: National University of Singapore, Faculty of Medicine, Singapore #:S.typhi:rem: 0511 #:S.typhi:rem:FEATURES Location/Qualifiers #:S.typhi:rem: source 1..2326 #:S.typhi:rem: /organism="Salmonella typhi" #:S.typhi:rem: /strain="Rawlings" #:S.typhi:rem: /db_xref="taxon:601" #:S.typhi:rem: rRNA 50..165 #:S.typhi:rem: /product="5S ribosomal RNA" #:S.typhi:rem: misc_feature 166..242 #:S.typhi:rem: /note="23S to 5S spacer" #:S.typhi:rem: rRNA 243..>2326 #:S.typhi:rem: /product="23S ribosomal RNA" #:S.typhi:rem:BASE COUNT 487 a 721 c 521 g 597 t #:S.enteri.1:title:sequences #:S.enteri.1:name:Salmonella enterica. #:S.enteri.1:subsp: #:S.enteri.1:strain: #:S.enteri.1:atcc: #:S.enteri.1:acs:U77919 #:S.enteri.1:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.1:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.1:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.1:who: #:S.enteri.1:date:22-JUL-1998 #:S.enteri.1:rem:ref:1 (bases 1 to 2908) #:S.enteri.1:rem:ref:2 (bases 1 to 2908) #:S.enteri.1:rem:auth:Christensen,H. #:S.enteri.1:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.1:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.1:rem:: Frederiksberg 1870, Denmark #:S.enteri.1:rem:title:Direct Submission #:S.enteri.1:rem:KEYWORDS:. #:S.enteri.1:rem:GenBank ACCESSION:U77919 #:S.enteri.2:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.2:name:Salmonella enterica 1,4,[5],12,:i:1,2. #:S.enteri.2:subsp: #:S.enteri.2:strain: #:S.enteri.2:atcc: #:S.enteri.2:acs:U77920 #:S.enteri.2:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.2:title:sequences #:S.enteri.2:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.2:who: #:S.enteri.2:date:22-JUL-1998 #:S.enteri.2:rem:ref:1 (bases 1 to 2908) #:S.enteri.2:rem:ref:2 (bases 1 to 2908) #:S.enteri.2:rem:auth:Christensen,H. #:S.enteri.2:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.2:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.2:rem:: Frederiksberg 1870, Denmark #:S.enteri.2:rem:title:Direct Submission #:S.enteri.2:rem:KEYWORDS:. #:S.enteri.2:rem:GenBank ACCESSION:U77920 #:S.enteri.3:title:sequences #:S.enteri.3:name:Salmonella enterica II 1,9,12:1,w:e,n,x. #:S.enteri.3:subsp: #:S.enteri.3:strain: #:S.enteri.3:atcc: #:S.enteri.3:acs:U77921 #:S.enteri.3:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.3:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.3:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.3:who: #:S.enteri.3:date:22-JUL-1998 #:S.enteri.3:rem:ref:1 (bases 1 to 2906) #:S.enteri.3:rem:ref:2 (bases 1 to 2906) #:S.enteri.3:rem:auth:Christensen,H. #:S.enteri.3:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.3:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.3:rem:: Frederiksberg 1870, Denmark #:S.enteri.3:rem:title:Direct Submission #:S.enteri.3:rem:KEYWORDS:. #:S.enteri.3:rem:GenBank ACCESSION:U77921 #:S.enteri.4:title:sequences #:S.enteri.4:name:Salmonella enterica IIIb 61:i:z. #:S.enteri.4:subsp: #:S.enteri.4:strain: #:S.enteri.4:atcc: #:S.enteri.4:acs:U77922 #:S.enteri.4:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.4:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.4:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.4:who: #:S.enteri.4:date:22-JUL-1998 #:S.enteri.4:rem:ref:1 (bases 1 to 2906) #:S.enteri.4:rem:ref:2 (bases 1 to 2906) #:S.enteri.4:rem:auth:Christensen,H. #:S.enteri.4:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.4:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.4:rem:: Frederiksberg 1870, Denmark #:S.enteri.4:rem:title:Direct Submission #:S.enteri.4:rem:KEYWORDS:. #:S.enteri.4:rem:GenBank ACCESSION:U77922 #:S.enteri.5:title:sequences #:S.enteri.5:name:Salmonella enterica IIIa. #:S.enteri.5:subsp: #:S.enteri.5:strain: #:S.enteri.5:atcc: #:S.enteri.5:acs:U77923 #:S.enteri.5:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.5:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.5:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.5:who: #:S.enteri.5:date:22-JUL-1998 #:S.enteri.5:rem:ref:1 (bases 1 to 2906) #:S.enteri.5:rem:ref:2 (bases 1 to 2906) #:S.enteri.5:rem:auth:Christensen,H. #:S.enteri.5:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.5:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.5:rem:: Frederiksberg 1870, Denmark #:S.enteri.5:rem:title:Direct Submission #:S.enteri.5:rem:KEYWORDS:. #:S.enteri.5:rem:GenBank ACCESSION:U77923 #:S.enteri.6:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.6:name:Salmonella enterica IIIa 51:z4,z23:-. #:S.enteri.6:subsp: #:S.enteri.6:strain: #:S.enteri.6:atcc: #:S.enteri.6:acs:U77924 #:S.enteri.6:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.6:title:sequences #:S.enteri.6:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.6:who: #:S.enteri.6:date:22-JUL-1998 #:S.enteri.6:rem:ref:1 (bases 1 to 2906) #:S.enteri.6:rem:ref:2 (bases 1 to 2906) #:S.enteri.6:rem:auth:Christensen,H. #:S.enteri.6:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.6:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.6:rem:: Frederiksberg 1870, Denmark #:S.enteri.6:rem:title:Direct Submission #:S.enteri.6:rem:KEYWORDS:. #:S.enteri.6:rem:GenBank ACCESSION:U77924 #:S.enteri.7:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.7:name:Salmonella enterica IV 43:z4,z23:-. #:S.enteri.7:subsp: #:S.enteri.7:strain: #:S.enteri.7:atcc: #:S.enteri.7:acs:U77926 #:S.enteri.7:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.7:title:sequences #:S.enteri.7:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.7:who: #:S.enteri.7:date:22-JUL-1998 #:S.enteri.7:rem:ref:1 (bases 1 to 2908) #:S.enteri.7:rem:ref:2 (bases 1 to 2908) #:S.enteri.7:rem:auth:Christensen,H. #:S.enteri.7:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.7:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.7:rem:: Frederiksberg 1870, Denmark #:S.enteri.7:rem:title:Direct Submission #:S.enteri.7:rem:KEYWORDS:. #:S.enteri.7:rem:GenBank ACCESSION:U77926 #:S.enteri.8:title:Phylogenetic relationships of Salmonella based on rRNA #:S.enteri.8:name:Salmonella enterica V 1,6,14,25:a:e,n,x. #:S.enteri.8:subsp: #:S.enteri.8:strain: #:S.enteri.8:atcc: #:S.enteri.8:acs:U77929 #:S.enteri.8:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.enteri.8:title:sequences #:S.enteri.8:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.enteri.8:who: #:S.enteri.8:date:22-JUL-1998 #:S.enteri.8:rem:ref:1 (bases 1 to 2908) #:S.enteri.8:rem:ref:2 (bases 1 to 2908) #:S.enteri.8:rem:auth:Christensen,H. #:S.enteri.8:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.enteri.8:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.enteri.8:rem:: Frederiksberg 1870, Denmark #:S.enteri.8:rem:title:Direct Submission #:S.enteri.8:rem:KEYWORDS:. #:S.enteri.8:rem:GenBank ACCESSION:U77929 #:S.bongori:name:Salmonella bongori 66:z41:-. #:S.bongori:subsp: #:S.bongori:strain: #:S.bongori:atcc: #:S.bongori:acs:U77927 #:S.bongori:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:S.bongori:title:sequences #:S.bongori:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:S.bongori:who: #:S.bongori:date:22-JUL-1998 #:S.bongori:title:Phylogenetic relationships of Salmonella based on rRNA #:S.bongori:rem:ref:1 (bases 1 to 2906) #:S.bongori:rem:ref:2 (bases 1 to 2906) #:S.bongori:rem:auth:Christensen,H. #:S.bongori:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:S.bongori:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:S.bongori:rem:: Frederiksberg 1870, Denmark #:S.bongori:rem:title:Direct Submission #:S.bongori:rem:KEYWORDS:. #:S.bongori:rem:GenBank ACCESSION:U77927 #:E.coli.A1:name:Escherichia coli #:E.coli.A1:subsp:strain K-12 #:E.coli.A1:strain: #:E.coli.A1:atcc: #:E.coli.A1:acs:M87049 #:E.coli.A1:auth:Young,R.A. #:E.coli.A1:title: #:E.coli.A1:jour: #:E.coli.A1:who: #:E.coli.A1:date: #:E.coli.A1:rem:LOCUS ECOUW85U 91408 bp ds-DNA BCT 08-SEP-1993 #:E.coli.A1:rem:DEFINITION E. coli genomic sequence of the region from 84.5 to 86.5 minutes. #:E.coli.A1:rem:ACCESSION M87049 #:E.coli.A1:rem:KEYWORDS acetohydroxy acid isomeroreductase; aspT gene; f133 gene; #:E.coli.A1:rem: f198 gene; f516 gene; ilvC gene; ilvY gene; #:E.coli.A1:rem: ketol-acid reductoisomerase; o137 gene; o221 gene; terminator; #:E.coli.A1:rem: trpT gene. #:E.coli.A1:rem:SOURCE Escherichia coli (strain K-12) DNA. #:E.coli.A1:rem: ORGANISM Escherichia coli #:E.coli.A1:rem: Prokaryotae; Gram-negative facultatively anaerobic rods; #:E.coli.A1:rem: Enterobacteriaceae. #:E.coli.A1:rem:REFERENCE 1 (sites) #:E.coli.A1:rem: AUTHORS Young,R.A. #:E.coli.A1:rem: TITLE Transcription termination in the Escherichia coli ribosomal RNA #:E.coli.A1:rem: operon rrnC #:E.coli.A1:rem: JOURNAL J. Biol. Chem. 254, 12725-12731 (1979) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 2 (sites) #:E.coli.A1:rem: AUTHORS Nargang,F.E., Subrahmanyam,C.S. and Umbarger,H.E. #:E.coli.A1:rem: TITLE Nucleotide sequence of ilvGEDA operon attenuator region of #:E.coli.A1:rem: Escherichia coli #:E.coli.A1:rem: JOURNAL Proc. Natl. Acad. Sci. U.S.A. 77, 1823-1827 (1980) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 3 (sites) #:E.coli.A1:rem: AUTHORS Lawther,R.P. and Hatfield,G.W. #:E.coli.A1:rem: TITLE Multivalent translational control of transcription termination at #:E.coli.A1:rem: attenuator of ilvGEDA operon of Escherichia coli K-12 #:E.coli.A1:rem: JOURNAL Proc. Natl. Acad. Sci. U.S.A. 77, 1862-1866 (1980) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 4 (sites) #:E.coli.A1:rem: AUTHORS Lawther,R.P., Calhoun,D.H., Adams,C.W., Hauser,C.A., Gray,J. and #:E.coli.A1:rem: Hatfield,G.W. #:E.coli.A1:rem: TITLE Molecular basis of valine resistance in Escherichia coli K-12 #:E.coli.A1:rem: JOURNAL Proc. Natl. Acad. Sci. U.S.A. 78, 922-925 (1981) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 5 (sites) #:E.coli.A1:rem: AUTHORS Raftery,L.A., Egan,J.B., Cline,S.W. and Yarus,M. #:E.coli.A1:rem: TITLE Defined set of cloned termination suppressors: In vivo activity of #:E.coli.A1:rem: isogenic UAG, UAA, and UGA suppressor tRNAs #:E.coli.A1:rem: JOURNAL J. Bacteriol. 158, 849-859 (1984) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 6 (sites) #:E.coli.A1:rem: AUTHORS Harms,E.H., Hsu,J.-H., Subrahmanyam,C.S. and Umbarger,H.E. #:E.coli.A1:rem: TITLE Comparison of the regulatory regions of ilvGEDA operons from #:E.coli.A1:rem: several enteric organisms #:E.coli.A1:rem: JOURNAL J. Bacteriol. 164, 207-216 (1985) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 7 (sites) #:E.coli.A1:rem: AUTHORS Coppola,G., Huang,F., Riley,J., Cox,J.L., Hantozopoulos,P., #:E.coli.A1:rem: Zhou,L.-B. and Calhoun,D.H. #:E.coli.A1:rem: TITLE Sequence and transcriptional activity of the Escherichia coli K-12 #:E.coli.A1:rem: chromosome region between rrnC and ilvGMEDA #:E.coli.A1:rem: JOURNAL Gene 97, 21-27 (1991) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 8 (sites) #:E.coli.A1:rem: AUTHORS Pagel,J.M., Winkelman,J.W., Adams,C.W. and Hatfield,G.W. #:E.coli.A1:rem: TITLE DNA topology-mediated regulation of transcription initiation from #:E.coli.A1:rem: the tandem promoters of the ilvGMEDA operon of Escherichia coli #:E.coli.A1:rem: JOURNAL J. Mol. Biol. 224, 919-935 (1992) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:REFERENCE 9 (bases 1 to 91408) #:E.coli.A1:rem: AUTHORS Daniels,D.L., Plunkett,G.III., Burland,V.D. and Blattner,F.R. #:E.coli.A1:rem: TITLE Analysis of the Escherichia coli genome: DNA Sequence of the region #:E.coli.A1:rem: from 84.5 to 86.5 minutes #:E.coli.A1:rem: JOURNAL Science 257, 771-778 (1992) #:E.coli.A1:rem: STANDARD full automatic #:E.coli.A1:rem:COMMENT #:E.coli.A1:rem: This sequence was determined as part of the E. coli Genome Project #:E.coli.A1:rem: (Frederick R. Blattner, director) at the University of #:E.coli.A1:rem: Wisconsin-Madison. Supported by award HG00301 from the NIH Human #:E.coli.A1:rem: Genome Project. A preliminary report was presented at the Cold #:E.coli.A1:rem: Spring Harbor meeting 'The Genome of E. coli' Oct. 16-19,1991. The #:E.coli.A1:rem: entire sequence was independently determined from E. coli MG1655; #:E.coli.A1:rem: overlaps and conflicts with other sequence determinations are #:E.coli.A1:rem: annotated. Data kindly submitted in computer readable form by: #:E.coli.A1:rem: Donna L. Daniels Laboratory of Genetics University of Wisconsin 445 #:E.coli.A1:rem: Henry Mall Madison WI 53706 USA Phone: 608-262-2534 Email: #:E.coli.A1:rem: donna@genetics.wisc.edu Fax: 608-263-7459 [Science (1992) In #:E.coli.A1:rem: press] Author requested #:E.coli.A1:rem: hold until publication. #:E.coli.A1:rem: NCBI gi: 148169 #:E.coli.A1:rem:FEATURES Location/Qualifiers #:E.coli.A1:rem: source 1..91408 #:E.coli.A1:rem: /organism="Escherichia coli" #:E.coli.A1:rem: many many lines deleted. #:E.coli.A1:rem: many many lines deleted. #:E.coli.A1:rem: rRNA 88585..90126 #:E.coli.A1:rem: /gene="rrsA (CGSC No. 189)" #:E.coli.A1:rem: /product="16S ribosomal RNA" #:E.coli.A1:rem: misc_feature 89608..90323 #:E.coli.A1:rem: /note="K01057 may be rrnD or rrnH instead of rrnA" #:E.coli.A1:rem: misc_difference 89624 #:E.coli.A1:rem: /note="C in K01057; T here" #:E.coli.A1:rem: misc_difference 89633..89634 #:E.coli.A1:rem: /note="TNG in K01057; TG here" #:E.coli.A1:rem: misc_difference 89649..89650 #:E.coli.A1:rem: /note="T in K01057; TC here" #:E.coli.A1:rem: misc_difference 89654..89655 #:E.coli.A1:rem: /note="T in K01057; TC here" #:E.coli.A1:rem: misc_difference 89737 #:E.coli.A1:rem: /note="GA in K01057; G here" #:E.coli.A1:rem: misc_difference 89791 #:E.coli.A1:rem: /note="GA in K01057; G here" #:E.coli.A1:rem: misc_difference 89808 #:E.coli.A1:rem: /note="G in K01057; T here" #:E.coli.A1:rem: misc_difference 89845 #:E.coli.A1:rem: /note="AA in K01057; A here" #:E.coli.A1:rem: misc_difference 90141 #:E.coli.A1:rem: /note="A in K01057; T here" #:E.coli.A1:rem: misc_difference 90147 #:E.coli.A1:rem: /note="C in K01057; A here" #:E.coli.A1:rem: tRNA 90195..90271 #:E.coli.A1:rem: /gene="ileT (CGSC No. 612)" #:E.coli.A1:rem: /product="transfer RNA-Ile1" #:E.coli.A1:rem: tRNA 90314..90389 #:E.coli.A1:rem: /gene="alaT (CGSC No. 1038)" #:E.coli.A1:rem: /product="transfer RNA-Ala1B" #:E.coli.A1:rem: misc_difference 90314..90317 #:E.coli.A1:rem: /note="GG in K01057; GGGG here" #:E.coli.A1:rem: misc_difference 90320..90321 #:E.coli.A1:rem: /note="A in K01057; AT here" #:E.coli.A1:rem: rRNA 90564..>91408 #:E.coli.A1:rem: /gene="rrlA (CGSC No. 203)" #:E.coli.A1:rem: /product="23S ribosomal RNA" #:E.coli.A1:rem:BASE COUNT 21251 a 23089 c 24848 g 22107 t 113 others #:E.coli.A1:rem:ORIGIN EcoRI site at 3974.776 kb in EcoMap5 84.7 min on genetic map; 85.0. #:E.coli.A2:name:Escherichia coli #:E.coli.A2:subsp: #:E.coli.A2:strain: #:E.coli.A2:atcc: #:E.coli.A2:acs:L19201 #:E.coli.A2:auth:Plunkett,G., Burland,V., Daniels,D.L. and Blattner,F.R. #:E.coli.A2:title: #:E.coli.A2:jour: #:E.coli.A2:who: #:E.coli.A2:date: #:E.coli.A2:rem:LOCUS ECOUW87 96484 bp ds-DNA BCT 29-OCT-1993 #:E.coli.A2:rem:DEFINITION E. coli chromosomal region from 87.2 to 89.2 minutes. #:E.coli.A2:rem:ACCESSION L19201 #:E.coli.A2:rem:KEYWORDS 23S ribosomal RNA; 5,10 methylenetetrahydrofolate reductase; #:E.coli.A2:rem: 50S ribosomal protein L31; 5S ribosomal RNA; #:E.coli.A2:rem: 6-phosphofructokinase; CDP-diglyceride hydrolase; #:E.coli.A2:rem: DNA polymerase I; L-rhamnose isomerase; Spot 42 RNA; #:E.coli.A2:rem: aspartokinase II/homoserine; attP2II; catalase HPI; #:E.coli.A2:rem: catalase hydroperoxidase I; cdh gene; chemosensory transducer; #:E.coli.A2:rem: cpxA gene; cystathionine; cytR gene; dehydrogenase II; dsbA gene; #:E.coli.A2:rem: extragenic palindromic element; fdhD gene; fdhE gene; fdoG gene; #:E.coli.A2:rem: fdoH gene; fdoI gene; formate dehydrogenase-O alpha subunit; #:E.coli.A2:rem: formate dehydrogenase-O beta subunit; #:E.coli.A2:rem: formate dehydrogenase-O gamma; gamma-synthase; glnA gene; #:E.coli.A2:rem: glnG gene; glnL gene; glpF gene; glpK gene; glpX gene; #:E.coli.A2:rem: glutamine synthetase; glycerol kinase; hslU gene; hslV gene; #:E.coli.A2:rem: katG gene; kdgT gene; manganese superoxide dismutase; metB gene; #:E.coli.A2:rem: metF aporepressor; metF gene; metJ gene; metL gene; mob gene; #:E.coli.A2:rem: msgA gene; periplasmic sulphate binding protein; pfkA gene; #:E.coli.A2:rem: polA gene; priA gene; primosomal protein replication factor; #:E.coli.A2:rem: rhaA gene; rhaB gene; rhaD gene; rhaR gene; rhaS gene; rhaT gene; #:E.coli.A2:rem: rhamnose permease; rhamnulokinase; rhamnulose kinase; #:E.coli.A2:rem: rhamnulose-1-phosphate aldolase; rpmE gene; rrfA gene; rrlA gene; #:E.coli.A2:rem: sbp gene; sodA gene; spf gene; suppressor; tpiA gene; #:E.coli.A2:rem: triosephosphate isomerase; triosephosphate mutase.. #:E.coli.A2:rem:SOURCE Escherichia coli (sub_strain MG1655, strain K-12) (library: lambda) #:E.coli.A2:rem: DNA. #:E.coli.A2:rem: ORGANISM Escherichia coli #:E.coli.A2:rem: Prokaryotae; Gram-negative facultatively anaerobic rods; #:E.coli.A2:rem: Enterobacteriaceae. #:E.coli.A2:rem:REFERENCE 1 (bases 1 to 96484) #:E.coli.A2:rem: AUTHORS Plunkett,G., Burland,V., Daniels,D.L. and Blattner,F.R. #:E.coli.A2:rem: TITLE Analysis of the Escherichia coli genome. III. DNA sequence of the #:E.coli.A2:rem: region from 87.2 to 89.2 minutes #:E.coli.A2:rem: JOURNAL Nucleic Acids Res. 21, 3391-3398 (1993) #:E.coli.A2:rem: STANDARD full automatic #:E.coli.A2:rem:COMMENT #:E.coli.A2:rem: This sequence was determined as part of the E. coli Genome Project #:E.coli.A2:rem: (Frederick R. Blattner, director) at the University of #:E.coli.A2:rem: Wisconsin-Madison. Supported by award HG00301 from the NIH Human #:E.coli.A2:rem: Genome Project. A preliminary report was presented at the Small #:E.coli.A2:rem: Genomes meeting, March 28-30 1993, Paris, France. The entire #:E.coli.A2:rem: sequence was independently determined from E. coli MG1655; #:E.coli.A2:rem: overlaps and conflicts with other sequence determinations are #:E.coli.A2:rem: annotated. The start of this entry overlaps the end of the entry #:E.coli.A2:rem: ECOUW85U (M87049) by the three bases of an EcoRI half-site. Data #:E.coli.A2:rem: kindly submitted in computer readable form by: #:E.coli.A2:rem: Guy Plunkett III #:E.coli.A2:rem: Laboratory of Genetics #:E.coli.A2:rem: University of Wisconsin #:E.coli.A2:rem: 445 Henry Mall #:E.coli.A2:rem: Madison WI 53706 #:E.coli.A2:rem: USA #:E.coli.A2:rem: Phone: 608-262-2534 #:E.coli.A2:rem: Email: ecoli@genetics.wisc.edu #:E.coli.A2:rem: Fax: 608-263-7459. #:E.coli.A2:rem: NCBI gi: 304961 #:E.coli.A2:rem:FEATURES Location/Qualifiers #:E.coli.A2:rem: source 1..96484 #:E.coli.A2:rem: /organism="Escherichia coli" #:E.coli.A2:rem: /sub_strain="MG1655" #:E.coli.A2:rem: /strain="K-12" #:E.coli.A2:rem: /sequenced_mol="DNA" #:E.coli.A2:rem: /tissue_lib="lambda" #:E.coli.A2:rem: /note="This sequence comprises the following lambda #:E.coli.A2:rem: clones: EC21-16, EC27-1225, EC27-649, EC19-119, EC23A58, #:E.coli.A2:rem: EC27-267, EC18-126. M13mp19 or Janus vectors were used for #:E.coli.A2:rem: subcloning" #:E.coli.A2:rem: rRNA <1..2063 #:E.coli.A2:rem: /gene="rrlA" #:E.coli.A2:rem: /standard_name="23S rRNA" #:E.coli.A2:rem: /note="CG Site No. 203" #:E.coli.A2:rem: /product="23S ribosomal RNA" #:E.coli.A2:rem: misc_feature 1..3 #:E.coli.A2:rem: /note="Eco RI half-site is 3bp overlap with end of M87049 #:E.coli.A2:rem: ECOWU85U" #:E.coli.A2:rem: misc_feature 1..19281 #:E.coli.A2:rem: /note="corresponds to lambda clone EC21-16" #:E.coli.A2:rem: rRNA 2157..2276 #:E.coli.A2:rem: /gene="rrfA" #:E.coli.A2:rem: /standard_name="5S rRNA" #:E.coli.A2:rem: /note="CG Site No. 210" #:E.coli.A2:rem: /product="5S ribosomal RNA" #:E.coli.A2:rem: terminator 2282..2321 #:E.coli.A2:rem: /note="putative" #:E.coli.A2:rem: terminator 2459..2483 #:E.coli.A2:rem: /note="putative" #:E.coli.A2:rem: many many lines deleleted. #:E.coli.A2:rem: many many lines deleleted. #:E.coli.A2:rem:BASE COUNT 23614 a 24221 c 25104 g 23525 t 20 others #:E.coli.A2:rem:ORIGIN Eco RI site at 4067.648 in EcoMap5. #:E.coli.B:name:Escherichia coli #:E.coli.B:subsp:sub_strain MG1655, strain K-12 #:E.coli.B:strain: #:E.coli.B:atcc: #:E.coli.B:acs:U00006 #:E.coli.B:auth:Blattner,F.R., Burland,V.D., Plunkett,G.,III, Sofia, H.J. #:E.coli.B:title: #:E.coli.B:jour: #:E.coli.B:who: #:E.coli.B:date: #:E.coli.B:rem:LOCUS ECOUW89 176195 bp ds-DNA BCT 17-DEC-1993 #:E.coli.B:rem:DEFINITION E. coli chromosomal region from 89.2 to 92.8 minutes. #:E.coli.B:rem:ACCESSION U00006 #:E.coli.B:rem:KEYWORDS . #:E.coli.B:rem:SOURCE Escherichia coli (sub_strain MG1655, strain K-12) (library: lambda) #:E.coli.B:rem: DNA. #:E.coli.B:rem: ORGANISM Escherichia coli #:E.coli.B:rem: Eubacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic #:E.coli.B:rem: rods; Enterobacteriaceae; Escherichia. #:E.coli.B:rem:REFERENCE 1 (bases 1 to 176195) #:E.coli.B:rem: AUTHORS Blattner,F.R., Burland,V.D., Plunkett,G.,III, Sofia, H.J. and #:E.coli.B:rem: Daniels,D.L. #:E.coli.B:rem: TITLE Analysis of the Escherichia coli genome IV. DNA sequence of the #:E.coli.B:rem: region from 89.2 to 92.8 minutes #:E.coli.B:rem: JOURNAL Nucleic Acids Res. 21, 5408-5417 (1993) #:E.coli.B:rem: STANDARD full automatic #:E.coli.B:rem:COMMENT #:E.coli.B:rem: This sequence was determined as part of the E. coli Genome Project #:E.coli.B:rem: (Frederick R. Blattner, director) at the University of #:E.coli.B:rem: Wisconsin-Madison. Supported by award HG00301 from the NIH Human #:E.coli.B:rem: Genome Project. The entire sequence was independently determined #:E.coli.B:rem: from E. coli MG1655; overlaps and conflicts with other sequence #:E.coli.B:rem: determinations are annotated. The start of this entry overlaps the #:E.coli.B:rem: end of the entry ECOUW87 (L19201) by 93 bp. NOTE: An update was #:E.coli.B:rem: submitted on 25-OCT-1993, reflecting a correction to the hemE #:E.coli.B:rem: sequence. #:E.coli.B:rem: NCBI gi: 409785 #:E.coli.B:rem:FEATURES Location/Qualifiers #:E.coli.B:rem: source 1..176195 #:E.coli.B:rem: /organism="Escherichia coli" #:E.coli.B:rem: /strain="K-12" #:E.coli.B:rem: /sub_strain="MG1655" #:E.coli.B:rem: /sequenced_mol="DNA" #:E.coli.B:rem: /note="This sequence comprises the following lambda #:E.coli.B:rem: clones: EC18-126, EC14-54, EC21-52, EC17-24, EC17-203, #:E.coli.B:rem: EC19-105, EC18-208, EC18-110, EC17-200, EC18-33, EC30-262, #:E.coli.B:rem: EC30-41, EC30K637-2a, EC30K637-5, EC27-975, EC22-27; #:E.coli.B:rem: M13mp19 or Janus vectors were used for subcloning" #:E.coli.B:rem: many many lines deleleted. #:E.coli.B:rem: many many lines deleleted. #:E.coli.B:rem: rRNA 31901..33442 #:E.coli.B:rem: /gene="rrsB" #:E.coli.B:rem: /standard_name="16S rRNA of rrnB operon" #:E.coli.B:rem: /note="CG Site No. 188" #:E.coli.B:rem: /product="16S ribosomal RNA" #:E.coli.B:rem: tRNA 33614..33689 #:E.coli.B:rem: /gene="gltT" #:E.coli.B:rem: /standard_name="glutamate tRNA 2 of rrnB operon" #:E.coli.B:rem: /note="CG Site No. 680; alternate gene name tgtB" #:E.coli.B:rem: /product="glutamate transfer RNA 2" #:E.coli.B:rem: misc_structure 33666..33810 #:E.coli.B:rem: /note="predicted bend of 77 degrees" #:E.coli.B:rem: misc_difference 33760 #:E.coli.B:rem: /note="T in J10695; N in V00348; A here" #:E.coli.B:rem: rRNA 33883..36786 #:E.coli.B:rem: /gene="rrlB" #:E.coli.B:rem: /standard_name="23S rRNA of rrnB operon" #:E.coli.B:rem: /note="CG Site No. 202" #:E.coli.B:rem: /product="23S ribosomal RNA" #:E.coli.B:rem: misc_feature 36875..37000 #:E.coli.B:rem: /note="corresponds to M25630; ECORRB(1..126)" #:E.coli.B:rem: rRNA 36879..36998 #:E.coli.B:rem: /gene="rrfB" #:E.coli.B:rem: /standard_name="5S rRNA of rrnB operon" #:E.coli.B:rem: /note="CG Site No. 209" #:E.coli.B:rem: /product="5S ribosomal RNA" #:E.coli.B:rem: misc_feature 36999..39489 #:E.coli.B:rem: /note="corresponds to M10123; ECOBIRA(1..2491)" #:E.coli.B:rem: terminator 37003..37044 #:E.coli.B:rem: /note="putative" #:E.coli.B:rem: terminator 37175..37205 #:E.coli.B:rem: /note="putative" #:E.coli.B:rem: many many lines deleleted. #:E.coli.B:rem: many many lines deleleted. #:E.coli.B:rem: rRNA 73388..74929 #:E.coli.B:rem: /gene="rrsE" #:E.coli.B:rem: /standard_name="16S rRNA of rrnE operon" #:E.coli.B:rem: /note="CG Site No. 185" #:E.coli.B:rem: /product="16S ribosomal RNA" #:E.coli.B:rem: misc_difference 73413 #:E.coli.B:rem: /note="G in J01697, V00335; A here" #:E.coli.B:rem: tRNA 75015..75090 #:E.coli.B:rem: /gene="gltV" #:E.coli.B:rem: /standard_name="glutamate tRNA 2 of rrnE operon" #:E.coli.B:rem: /note="CG Site No. 678; alternate gene name tgtE" #:E.coli.B:rem: /product="glutamate transfer RNA 2" #:E.coli.B:rem: misc_structure 75098..75209 #:E.coli.B:rem: /note="predicted bend of 72 degrees" #:E.coli.B:rem: rRNA 75285..78188 #:E.coli.B:rem: /gene="rrlE" #:E.coli.B:rem: /standard_name="23S rRNA of rrnE operon" #:E.coli.B:rem: /note="CG Site No. 199" #:E.coli.B:rem: /product="23S ribosomal RNA" #:E.coli.B:rem: misc_feature 78282..79725 #:E.coli.B:rem: /note="corresponds to X02800; ECORRNE(1..1444)" #:E.coli.B:rem: rRNA 78282..78401 #:E.coli.B:rem: /gene="rrfE" #:E.coli.B:rem: /standard_name="5S rRNA of rrnE operon" #:E.coli.B:rem: /note="CG Site No. 206" #:E.coli.B:rem: /product="5S ribosomal RNA" #:E.coli.B:rem: terminator 78410..78441 #:E.coli.B:rem: /note="putative" #:E.coli.B:rem: many many lines deleleted. #:E.coli.B:rem: many many lines deleleted. #:E.coli.C:name:Escherichia coli #:E.coli.C:subsp:sub_strain MG1655, strain K-12 #:E.coli.C:strain:region from 81.5 to 84.5 minutes #:E.coli.C:atcc: #:E.coli.C:acs:L10328 #:E.coli.C:auth: #:E.coli.C:title: #:E.coli.C:jour: #:E.coli.C:who: #:E.coli.C:date: #:E.coli.C:rem:LOCUS ECOUW82 136254 bp ds-DNA BCT 08-SEP-1993 #:E.coli.C:rem:DEFINITION E. coli genomic region from 81.5 to 84.5 minutes. #:E.coli.C:rem:ACCESSION L10328 #:E.coli.C:rem:KEYWORDS deoxyuridinetriphosphatase; dfp gene; dut gene; #:E.coli.C:rem: formamidopyrimidine-DNA glycosylase; fpg gene; mutH gene; #:E.coli.C:rem: orotate phosphoribosyltransferase; pyrE gene; radC gene; #:E.coli.C:rem: ribosomal protein L28; ribosomal protein L33; rpmB gene; #:E.coli.C:rem: rpmG gene; ttk gene. #:E.coli.C:rem:SOURCE Escherichia coli (sub_strain MG1655, strain K-12) (library: lambda) #:E.coli.C:rem: DNA. #:E.coli.C:rem: ORGANISM Escherichia coli #:E.coli.C:rem: Prokaryotae; Gram-negative facultatively anaerobic rods; #:E.coli.C:rem: Enterobacteriaceae. #:E.coli.C:rem: rRNA 131193..132733 #:E.coli.C:rem: /gene="rrsC" #:E.coli.C:rem: /note="CG Site No. 187" #:E.coli.C:rem: /product="16S ribosomal RNA" #:E.coli.C:rem: misc_feature 132573..133107 #:E.coli.C:rem: /note="X12420; ECO16S23S(1..535)" #:E.coli.C:rem: misc_difference replace(132780,"a") #:E.coli.C:rem: /note="in M20398; `g' in X12420 and this sequence" #:E.coli.C:rem: tRNA 132819..132894 #:E.coli.C:rem: /gene="gltU" #:E.coli.C:rem: /standard_name="tgtC gene" #:E.coli.C:rem: /note="CG Site No. 679; part of rrnC operon" #:E.coli.C:rem: /anticodon=(pos:unspecified,aa:Glu) #:E.coli.C:rem: /product="transfer RNA-Glu" #:E.coli.C:rem: misc_difference replace(132836,"a") #:E.coli.C:rem: /note="in M20398; `g' in X12420 and this sequence" #:E.coli.C:rem: misc_structure 132871..133022 #:E.coli.C:rem: /note="predicted bend of 77 degrees" #:E.coli.C:rem: misc_difference replace(133018,"g") #:E.coli.C:rem: /note="in M20398; `a' in X12420 and this sequence" #:E.coli.C:rem: rRNA 133087..135993 #:E.coli.C:rem: /gene="rrlC" #:E.coli.C:rem: /note="CG Site No. 201; part of the rrnC operon" #:E.coli.C:rem: /product="23S ribosomal RNA" #:E.coli.C:rem: misc_feature 136086..>136254 #:E.coli.C:rem: /note="V00349 continues in M87049 (ECOUW85U)" #:E.coli.C:rem: rRNA 136086..136205 #:E.coli.C:rem: /gene="rrfC" #:E.coli.C:rem: /note="CG Site No. 208; part of the rrnC operon" #:E.coli.C:rem: /product="5S ribosomal RNA" #:E.coli.C:rem: misc_feature 136249..136254 #:E.coli.C:rem: /note="EcoRI site is 6 bp overlap with M87049 (ECOUW85U)" #:E.coli.C:rem:BASE COUNT 33568 a 35605 c 34347 g 32626 t 108 others #:E.coli.C:rem:ORIGIN BamHI site at 3833.658 kb in EcoMap5. #:E.coli.E:name:Escherichia coli #:E.coli.E:subsp:region from 89.2 to 92.8 minutes #:E.coli.E:strain:sub_strain MG1655, strain K-12 #:E.coli.E:atcc: #:E.coli.E:acs:U00006 #:E.coli.E:auth: #:E.coli.E:title: #:E.coli.E:jour: #:E.coli.E:who: #:E.coli.E:date: #:E.coli.E:rem:LOCUS ECOUW89 176195 bp ds-DNA BCT 17-DEC-1993 #:E.coli.E:rem:DEFINITION E. coli chromosomal region from 89.2 to 92.8 minutes. #:E.coli.E:rem:ACCESSION U00006 #:E.coli.E:rem:KEYWORDS . #:E.coli.E:rem:SOURCE Escherichia coli (sub_strain MG1655, strain K-12) (library: lambda) #:E.coli.E:rem: DNA. #:E.coli.E:rem: ORGANISM Escherichia coli #:E.coli.E:rem: Eubacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic #:E.coli.E:rem: rods; Enterobacteriaceae; Escherichia. #:E.coli.E:rem:REFERENCE 1 (bases 1 to 176195) #:E.coli.E:rem: AUTHORS Blattner,F.R., Burland,V.D., Plunkett,G.,III, Sofia, H.J. and #:E.coli.E:rem: Daniels,D.L. #:E.coli.E:rem: TITLE Analysis of the Escherichia coli genome IV. DNA sequence of the #:E.coli.E:rem: region from 89.2 to 92.8 minutes #:E.coli.E:rem: JOURNAL Nucleic Acids Res. 21, 5408-5417 (1993) #:E.coli.E:rem: STANDARD full automatic #:E.coli.E:rem:COMMENT #:E.coli.E:rem: This sequence was determined as part of the E. coli Genome Project #:E.coli.E:rem: (Frederick R. Blattner, director) at the University of #:E.coli.E:rem: Wisconsin-Madison. Supported by award HG00301 from the NIH Human #:E.coli.E:rem: Genome Project. The entire sequence was independently determined #:E.coli.E:rem: from E. coli MG1655; overlaps and conflicts with other sequence #:E.coli.E:rem: determinations are annotated. The start of this entry overlaps the #:E.coli.E:rem: end of the entry ECOUW87 (L19201) by 93 bp. NOTE: An update was #:E.coli.E:rem: submitted on 25-OCT-1993, reflecting a correction to the hemE #:E.coli.E:rem: sequence. #:E.coli.E:rem: NCBI gi: 409785 #:E.coli.E:rem:FEATURES Location/Qualifiers #:E.coli.E:rem: source 1..176195 #:E.coli.E:rem: /organism="Escherichia coli" #:E.coli.E:rem: /strain="K-12" #:E.coli.E:rem: /sub_strain="MG1655" #:E.coli.E:rem: /sequenced_mol="DNA" #:E.coli.E:rem: /note="This sequence comprises the following lambda #:E.coli.E:rem: clones: EC18-126, EC14-54, EC21-52, EC17-24, EC17-203, #:E.coli.E:rem: EC19-105, EC18-208, EC18-110, EC17-200, EC18-33, EC30-262, #:E.coli.E:rem: EC30-41, EC30K637-2a, EC30K637-5, EC27-975, EC22-27; #:E.coli.E:rem: M13mp19 or Janus vectors were used for subcloning" #:E.coli.E:rem: many many lines deleleted. #:E.coli.E:rem: many many lines deleleted. #:E.coli.E:rem: rRNA 31901..33442 #:E.coli.E:rem: /gene="rrsB" #:E.coli.E:rem: /standard_name="16S rRNA of rrnB operon" #:E.coli.E:rem: /note="CG Site No. 188" #:E.coli.E:rem: /product="16S ribosomal RNA" #:E.coli.E:rem: tRNA 33614..33689 #:E.coli.E:rem: /gene="gltT" #:E.coli.E:rem: /standard_name="glutamate tRNA 2 of rrnB operon" #:E.coli.E:rem: /note="CG Site No. 680; alternate gene name tgtB" #:E.coli.E:rem: /product="glutamate transfer RNA 2" #:E.coli.E:rem: misc_structure 33666..33810 #:E.coli.E:rem: /note="predicted bend of 77 degrees" #:E.coli.E:rem: misc_difference 33760 #:E.coli.E:rem: /note="T in J10695; N in V00348; A here" #:E.coli.E:rem: rRNA 33883..36786 #:E.coli.E:rem: /gene="rrlB" #:E.coli.E:rem: /standard_name="23S rRNA of rrnB operon" #:E.coli.E:rem: /note="CG Site No. 202" #:E.coli.E:rem: /product="23S ribosomal RNA" #:E.coli.E:rem: misc_feature 36875..37000 #:E.coli.E:rem: /note="corresponds to M25630; ECORRB(1..126)" #:E.coli.E:rem: rRNA 36879..36998 #:E.coli.E:rem: /gene="rrfB" #:E.coli.E:rem: /standard_name="5S rRNA of rrnB operon" #:E.coli.E:rem: /note="CG Site No. 209" #:E.coli.E:rem: /product="5S ribosomal RNA" #:E.coli.E:rem: misc_feature 36999..39489 #:E.coli.E:rem: /note="corresponds to M10123; ECOBIRA(1..2491)" #:E.coli.E:rem: terminator 37003..37044 #:E.coli.E:rem: /note="putative" #:E.coli.E:rem: terminator 37175..37205 #:E.coli.E:rem: /note="putative" #:E.coli.E:rem: many many lines deleleted. #:E.coli.E:rem: many many lines deleleted. #:E.coli.E:rem: rRNA 73388..74929 #:E.coli.E:rem: /gene="rrsE" #:E.coli.E:rem: /standard_name="16S rRNA of rrnE operon" #:E.coli.E:rem: /note="CG Site No. 185" #:E.coli.E:rem: /product="16S ribosomal RNA" #:E.coli.E:rem: misc_difference 73413 #:E.coli.E:rem: /note="G in J01697, V00335; A here" #:E.coli.E:rem: tRNA 75015..75090 #:E.coli.E:rem: /gene="gltV" #:E.coli.E:rem: /standard_name="glutamate tRNA 2 of rrnE operon" #:E.coli.E:rem: /note="CG Site No. 678; alternate gene name tgtE" #:E.coli.E:rem: /product="glutamate transfer RNA 2" #:E.coli.E:rem: misc_structure 75098..75209 #:E.coli.E:rem: /note="predicted bend of 72 degrees" #:E.coli.E:rem: rRNA 75285..78188 #:E.coli.E:rem: /gene="rrlE" #:E.coli.E:rem: /standard_name="23S rRNA of rrnE operon" #:E.coli.E:rem: /note="CG Site No. 199" #:E.coli.E:rem: /product="23S ribosomal RNA" #:E.coli.E:rem: misc_feature 78282..79725 #:E.coli.E:rem: /note="corresponds to X02800; ECORRNE(1..1444)" #:E.coli.E:rem: rRNA 78282..78401 #:E.coli.E:rem: /gene="rrfE" #:E.coli.E:rem: /standard_name="5S rRNA of rrnE operon" #:E.coli.E:rem: /note="CG Site No. 206" #:E.coli.E:rem: /product="5S ribosomal RNA" #:E.coli.E:rem: terminator 78410..78441 #:E.coli.E:rem: /note="putative" #:E.coli.E:rem: many many lines deleleted. #:E.coli.E:rem: many many lines deleleted. #:E.coli.H:name:Escherichia coli #:E.coli.H:subsp:strain K12 #:E.coli.H:strain: #:E.coli.H:atcc: #:E.coli.H:acs:D12649 #:E.coli.H:auth:Nakayashiki,T., Adachi,T., Miki,T. and Inokuchi,H. #:E.coli.H:title: #:E.coli.H:jour: #:E.coli.H:who: #:E.coli.H:date: #:E.coli.H:rem:LOCUS ECORRNH 4481 bp ds-DNA BCT 23-OCT-1992 #:E.coli.H:rem:DEFINITION E.coli rrnH gene for rRNAs and tRNAs. #:E.coli.H:rem:ACCESSION D12649 #:E.coli.H:rem:KEYWORDS 16S rRNA; 23S rRNA; 5S rRNA; tRNA-Ala; tRNA-Ile. #:E.coli.H:rem:SOURCE Escherichia coli (strain K12) (library: Kohara) DNA. #:E.coli.H:rem: ORGANISM Escherichia coli #:E.coli.H:rem: Prokaryotae; Bacteria; Gracilicutes; Scotobacteria; Facultatively #:E.coli.H:rem: anaerobic rods; Enterobacteriaceae. #:E.coli.H:rem:REFERENCE 1 (bases 1 to 4481) #:E.coli.H:rem: AUTHORS Nakayashiki,T., Adachi,T., Miki,T. and Inokuchi,H. #:E.coli.H:rem: TITLE Nucleotide sequence of the rrnH gene from Escherichia coli #:E.coli.H:rem: JOURNAL Unpublished (1992) #:E.coli.H:rem: STANDARD full automatic #:E.coli.H:rem:COMMENT #:E.coli.H:rem: Submitted (17-JUL-1992) to DDBJ by: Toru Nakayashiki #:E.coli.H:rem: Dept. of Biophysics #:E.coli.H:rem: Faculty of Science, Kyoto University #:E.coli.H:rem: Sakyo-ku, Kyoto 606-01 #:E.coli.H:rem: Japan #:E.coli.H:rem: Phone: 075-753-4200 #:E.coli.H:rem: Fax: 075-791-0271. #:E.coli.H:rem: NCBI gi: 216643 #:E.coli.H:rem:FEATURES Location/Qualifiers #:E.coli.H:rem: source 1..4481 #:E.coli.H:rem: /organism="Escherichia coli" #:E.coli.H:rem: rRNA <1..869 #:E.coli.H:rem: /gene="rrnH" #:E.coli.H:rem: /product="16S rRNA" #:E.coli.H:rem: tRNA 938..1014 #:E.coli.H:rem: /gene="rrnH" #:E.coli.H:rem: /product="tRNA-Ile" #:E.coli.H:rem: tRNA 1057..1132 #:E.coli.H:rem: /gene="rrnH" #:E.coli.H:rem: /product="tRNA-Ala" #:E.coli.H:rem: rRNA 1316..4219 #:E.coli.H:rem: /gene="rrnH" #:E.coli.H:rem: /product="23S rRNA" #:E.coli.H:rem: rRNA 4313..4432 #:E.coli.H:rem: /gene="rrnH" #:E.coli.H:rem: /product="5S rRNA" #:E.coli.H:rem:BASE COUNT 1179 a 992 c 1365 g 945 t #:E.coli.H:rem:ORIGIN #:C.freundii:name:Citrobacter freundii. #:C.freundii:subsp: #:C.freundii:strain: #:C.freundii:atcc: #:C.freundii:acs:U77928 #:C.freundii:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:C.freundii:title:Phylogenetic relationships of Salmonella based on rRNA #:C.freundii:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:C.freundii:who: #:C.freundii:date:22-JUL-1998 #:C.freundii:title:sequences #:C.freundii:rem:ref:1 (bases 1 to 2906) #:C.freundii:rem:ref:2 (bases 1 to 2906) #:C.freundii:rem:auth:Christensen,H. #:C.freundii:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:C.freundii:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:C.freundii:rem:: Frederiksberg 1870, Denmark #:C.freundii:rem:title:Direct Submission #:C.freundii:rem:KEYWORDS:. #:C.freundii:rem:GenBank ACCESSION:U77928 #:K.pneumoni:auth:,R., Weizenegger,M. and Schleifer,K.H. #:K.pneumoni:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:K.pneumoni:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:K.pneumoni:title:proteobacteria #:K.pneumoni:name:Klebsiella pneumoniae. #:K.pneumoni:subsp: #:K.pneumoni:strain: #:K.pneumoni:atcc: #:K.pneumoni:acs:X87284 #:K.pneumoni:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:K.pneumoni:title:Comparative sequence analysis of 23S rRNA from #:K.pneumoni:jour:Unpublished #:K.pneumoni:who: #:K.pneumoni:date:03-JUL-1997 #:K.pneumoni:rem:ref:1 (bases 1 to 2903) #:K.pneumoni:rem:ref:2 (bases 1 to 2903) #:K.pneumoni:rem:auth:Ludwig,W. #:K.pneumoni:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:K.pneumoni:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:K.pneumoni:rem:: FRG #:K.pneumoni:rem:title:Direct Submission #:K.pneumoni:rem:ref:3 (bases 1 to 2903) #:K.pneumoni:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:K.pneumoni:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:K.pneumoni:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:K.pneumoni:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:K.pneumoni:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:K.pneumoni:rem:title:Comparative sequence analysis of 23S rRNA from #:K.pneumoni:rem:: proteobacteria #:K.pneumoni:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:K.pneumoni:rem:GenBank ACCESSION:X87284 #:Y.enteroco:title:Phylogenetic relationships of Salmonella based on rRNA #:Y.enteroco:name:Yersinia enterocolitica. #:Y.enteroco:subsp: #:Y.enteroco:strain: #:Y.enteroco:atcc: #:Y.enteroco:acs:U77925 #:Y.enteroco:auth:Christensen,H., Nordentoft,S. and Olsen,J.E. #:Y.enteroco:title:sequences #:Y.enteroco:jour:Int. J. Syst. Bacteriol. 48, 605-610 (1998) #:Y.enteroco:who: #:Y.enteroco:date:22-JUL-1998 #:Y.enteroco:rem:ref:1 (bases 1 to 2906) #:Y.enteroco:rem:ref:2 (bases 1 to 2906) #:Y.enteroco:rem:auth:Christensen,H. #:Y.enteroco:rem:jour:Submitted (12-NOV-1996) Veterinary Microbiology, Royal #:Y.enteroco:rem:: Veterinary and Agricultural University, Bulowsvej 13, #:Y.enteroco:rem:: Frederiksberg 1870, Denmark #:Y.enteroco:rem:title:Direct Submission #:Y.enteroco:rem:KEYWORDS:. #:Y.enteroco:rem:GenBank ACCESSION:U77925 #:P.shigello:name:Plesiomonas shigelloides #:P.shigello:subsp: #:P.shigello:strain: #:P.shigello:atcc: #:P.shigello:acs:X65487 #:P.shigello:auth: #:P.shigello:title: #:P.shigello:jour: #:P.shigello:who: #:P.shigello:date: #:P.shigello:rem:ID PS23SRRN standard; DNA; PRO; 2761 BP. #:P.shigello:rem:XX #:P.shigello:rem:AC X65487; #:P.shigello:rem:XX #:P.shigello:rem:DT 10-AUG-1992 (Rel. 33, Created) #:P.shigello:rem:DT 10-AUG-1992 (Rel. 33, Last updated, Version 2) #:P.shigello:rem:XX #:P.shigello:rem:DE P.shigelloides gene for 23S rRNA #:P.shigello:rem:XX #:P.shigello:rem:KW 23S ribosomal RNA; ribosomal RNA. #:P.shigello:rem:XX #:P.shigello:rem:OS Plesiomonas shigelloides #:P.shigello:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:P.shigello:rem:OC Facultatively anaerobic rods; Vibrionaceae. #:P.shigello:rem:XX #:P.shigello:rem:RN [1] #:P.shigello:rem:RA East A.K., Allaway D., Collins M.D.; #:P.shigello:rem:RT "Analysis of DNA encoding 23S rRNA and 16S-23S rRNA intergenic #:P.shigello:rem:RT spacer regions from Plesiomonas shigelloides"; #:P.shigello:rem:RL FEMS Microbiol. Lett. 95:57-62(1992). #:P.shigello:rem:XX #:P.shigello:rem:RN [2] #:P.shigello:rem:RP 1-2761 #:P.shigello:rem:RA East A.K.; #:P.shigello:rem:RT ; #:P.shigello:rem:RL Submitted (08-APR-1992) on tape to the EMBL Data Library by: #:P.shigello:rem:RL A.K. East, AFRC Inst of Food Res/Reading Lab, Microbiology #:P.shigello:rem:RL Department, Earley Gate, Whiteknights Rd, Reading RG6 2EF, UK #:P.shigello:rem:XX #:P.shigello:rem:CC *source: strain=NCIMB 9242; #:P.shigello:rem:CC *source: clone=pAEA3; #:P.shigello:rem:XX #:P.shigello:rem:FH Key Location/Qualifiers #:P.shigello:rem:FH #:P.shigello:rem:FT rRNA <1..>2761 #:P.shigello:rem:FT /product="23S rRNA" #:P.shigello:rem:XX #:P.shigello:rem:SQ Sequence 2761 BP; 745 A; 578 C; 862 G; 576 T; 0 other; #:H.influe.F:name:Haemophilus influenzae #:H.influe.F:subsp: #:H.influe.F:strain:strain Rd #:H.influe.F:atcc: #:H.influe.F:acs:U32707 L42023 #:H.influe.F:auth: #:H.influe.F:title: #:H.influe.F:jour: #:H.influe.F:who: #:H.influe.F:date: #:H.influe.F:rem:LOCUS HIU32707 12896 bp DNA BCT 02-AUG-1995 #:H.influe.F:rem:DEFINITION Haemophilus influenzae hsdS, prrD, arcB-A, rrnF 5S, rrnF 23S genes #:H.influe.F:rem: from bases 232210 to 245105 of the complete genome. #:H.influe.F:rem:ACCESSION U32707 L42023 #:H.influe.F:rem:KEYWORDS . #:H.influe.F:rem:SOURCE Haemophilus influenzae (strain Rd). #:H.influe.F:rem: ORGANISM Haemophilus influenzae #:H.influe.F:rem: Eubacteria; Proteobacteria; gamma subdivision; Pasteurellaceae; #:H.influe.F:rem: Haemophilus. #:H.influe.F:rem:REFERENCE 1 (bases 1 to 12896) #:H.influe.F:rem: AUTHORS Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A., #:H.influe.F:rem: Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F., #:H.influe.F:rem: Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G., FitzHugh,W., #:H.influe.F:rem: Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R., Liu,L.-I., #:H.influe.F:rem: Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A., Spriggs,T., #:H.influe.F:rem: Hedblom,E., Cotton,M.D., Utterback,T.R., Hanna,M.C., Nguyen,D.T., #:H.influe.F:rem: Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L., #:H.influe.F:rem: Fuhrmann,J.L., Geoghagen,N.S.M., Gnehm,C.L., McDonald,L.A., #:H.influe.F:rem: Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C. #:H.influe.F:rem: TITLE Whole-genome random sequencing and assembly of Haemophilus #:H.influe.F:rem: influenzae Rd #:H.influe.F:rem: JOURNAL Science 269, 496-512 (1995) #:H.influe.F:rem:REFERENCE 2 (bases 1 to 12896) #:H.influe.F:rem: AUTHORS White,O. #:H.influe.F:rem: TITLE Direct Submission #:H.influe.F:rem: JOURNAL Submitted (31-JUL-1995) The Institute for Genomic Research, 932 #:H.influe.F:rem: Clopper Rd., Gaithersburg, MD 20878, USA #:H.influe.F:rem:COMMENT #:H.influe.F:rem: Address all correspondence to: #:H.influe.F:rem: J. Craig Venter #:H.influe.F:rem: The Institute for Genomic Research #:H.influe.F:rem: 932 Clopper Rd, Gaithersburg, MD, 20878 #:H.influe.F:rem: (New address as of Sept 9, 1995: 9712 Medical Center Dr, #:H.influe.F:rem: Rockville, MD, 20850) #:H.influe.F:rem: Jean-Francois Tomb, Brian A. Dougherty, and #:H.influe.F:rem: Hamilton O. Smith are with the Johns Hopkins University School of #:H.influe.F:rem: Medicine, Baltimore, MD, 21205. #:H.influe.F:rem: Joseph M. Merrick is with the State University of New York, #:H.influe.F:rem: Department of Microbiology, Buffalo, NY, 14214. #:H.influe.F:rem: Chris Fields' current address is The National Center for Genome #:H.influe.F:rem: Resources, Sante Fe, NM, 87505. #:H.influe.F:rem: Keith McKenney is with the National Institute for Standards and #:H.influe.F:rem: Technology, Gaithersburg, MD, 20878. #:H.influe.F:rem: All other authors are with The Institute for Genomic Research, 932 #:H.influe.F:rem: Clopper Rd, Gaithersburg, MD, 20878. #:H.influe.F:rem: Predicted open reading frames were determined using GeneMark #:H.influe.F:rem: software, kindly supplied by Mark Borodovsky, Georgia Institute of #:H.influe.F:rem: Technology, Atlanta, GA, 30332. e-mail: mark@amber.gatech.edu #:H.influe.F:rem: Submitted by: Robert D. Fleischmann e-mail: rdfleisc@tigr.org #:H.influe.F:rem: Annotation: Owen White e-mail: owhite@tigr.org #:H.influe.F:rem: Biological role information, putative identifications, sequence #:H.influe.F:rem: alignments, on-line name and sequence search capability are #:H.influe.F:rem: available at TIGR's World Wide Web site #:H.influe.F:rem: (URL: http://www.tigr.org/). #:H.influe.F:rem: NCBI gi: 925116 #:H.influe.F:rem:FEATURES Location/Qualifiers #:H.influe.F:rem: source 1..12896 #:H.influe.F:rem: /organism="Haemophilus influenzae" #:H.influe.F:rem: /strain="Rd" #:H.influe.F:rem: CDS 678..1835 #:H.influe.F:rem: /gene="hsdS" #:H.influe.F:rem: /standard_name="HI0216" #:H.influe.F:rem: /note="similar to GB:X73984 (Escherichia coli) percent #:H.influe.F:rem: identity: 36.1; identified by sequence similarity; #:H.influe.F:rem: putative; Method: conceptual translation supplied by #:H.influe.F:rem: author. NCBI gi: 925117" #:H.influe.F:rem: /codon_start=1 #:H.influe.F:rem: /product="type I restriction enzyme ecokI specificity #:H.influe.F:rem: protein" #:H.influe.F:rem: /translation="MKNNRTFLEKLLEGSEVEWKPLDEVANIVNNARKPVKSSLRVSG #:H.influe.F:rem: NIPYYGANNIQDYVEGYTHEGEFVLIAEDGSASLENYSIQWAVGKFWANNHVHVVNGK #:H.influe.F:rem: EKLNNRFLYHYLTNMNFIPFLAGKERAKLTKAKLQQIPIPIPPLSVQTEIVKILDALT #:H.influe.F:rem: ALTSELTSELTSELTSELILRQKQYEYYREKLLNIDEMNKVIELGDVGPVRMCKRILK #:H.influe.F:rem: NQTASSGDIPFYKIGTFGKKPDAYISNELFQEYKQKYSYPKKGDILISASGTIGRTVI #:H.influe.F:rem: FDGENSYFQDSNIVWIDNDETLVLNKYLYHFYKIAKWGIAEGGTIQRLYNDNLKKVKI #:H.influe.F:rem: SIPPLKEQHRIVSILDKFETLTNSITEGLPLAIEQSQKRYEYYRELLLNFS" #:H.influe.F:rem: CDS 1964..2494 #:H.influe.F:rem: /standard_name="HI0217" #:H.influe.F:rem: /note="identified by GeneMark; putative; Method: #:H.influe.F:rem: conceptual translation supplied by author. NCBI gi: #:H.influe.F:rem: 925118" #:H.influe.F:rem: /codon_start=1 #:H.influe.F:rem: /product="H. influenzae predicted coding region HI0217" #:H.influe.F:rem: /translation="MSNYRRDFTKGGLYFFTIVLQDRTKSYLTDYINEFRSAYKQTCE #:H.influe.F:rem: HYPFETVAICILPDHIHLLMQLPENDDNYAIRIAYLKTQFTRQLPKECRQFNKNRQKY #:H.influe.F:rem: RESGIWQRRFWEHLIRDDKDLANHLDYIYYNPVKHGYVEVVKDWPYSSFHRDVKAEIY #:H.influe.F:rem: PEDWGGNPDLKIKGDI" #:H.influe.F:rem: CDS 2642..3133 #:H.influe.F:rem: /gene="prrD" #:H.influe.F:rem: /standard_name="HI0218" #:H.influe.F:rem: /note="similar to SP:P17224 (Escherichia coli) percent #:H.influe.F:rem: identity: 63.9; identified by sequence similarity; #:H.influe.F:rem: putative; Method: conceptual translation supplied by #:H.influe.F:rem: author. NCBI gi: 925119" #:H.influe.F:rem: /codon_start=1 #:H.influe.F:rem: /product="anticodon nuclease masking-agent" #:H.influe.F:rem: /translation="MTQYKTIAESNNFIVLDQYNKFVEESNAGYQTERSLEREFIRDL #:H.influe.F:rem: QAQGYEYLQWLNNHDELIKNLRAQLQRLNNVVFSDAEWQRFLEEYLDKPSDNLIEKTR #:H.influe.F:rem: KIHDDYIYDFVFDNGRIQNIYLLDKKNLANNSLQVINQFKQTGSYDNRYDVTILVNGL #:H.influe.F:rem: PLY" #:H.influe.F:rem: CDS complement(5875..6516) #:H.influe.F:rem: /standard_name="HI0219" #:H.influe.F:rem: /note="similar to GB:S68137 (Pasteurella haemolytica) #:H.influe.F:rem: percent identity: 84.7; identified by sequence similarity; #:H.influe.F:rem: putative; Method: conceptual translation supplied by #:H.influe.F:rem: author. NCBI gi: 925120" #:H.influe.F:rem: /codon_start=1 #:H.influe.F:rem: /product="hypothetical protein (GB:S68137_1)" #:H.influe.F:rem: /translation="MEIYMSVFNTFVEFVARIVAPMQRQFINFIRIAIFIVMAWIGGL #:H.influe.F:rem: KVCQYEADGIAHFVSNSPFFSYMYEKGPNLVPNDKGELVMEYTLHKNPEGKMVAKNIE #:H.influe.F:rem: WHKENGTYTASYIIGAIIVTVGILTLAGIWNATAGLAGGLLTFGMSIVTLSFLITTPE #:H.influe.F:rem: AWVPNLGGDLPTPAYGFPYLSGVGRLVIKDIIMMAGGLTAAAECANRILARKK" #:H.influe.F:rem: CDS complement(7537..8514) #:H.influe.F:rem: /gene="arcB-A" #:H.influe.F:rem: /standard_name="HI0220" #:H.influe.F:rem: /note="similar to SP:P22763 (Escherichia coli) percent #:H.influe.F:rem: identity: 48.9; identified by sequence similarity; #:H.influe.F:rem: putative; Method: conceptual translation supplied by #:H.influe.F:rem: author. NCBI gi: 925121" #:H.influe.F:rem: /codon_start=1 #:H.influe.F:rem: /product="aerobic respiration control sensor protein" #:H.influe.F:rem: /translation="MKNFKYFAQSYVDWVIRLGRLRFSLLGVMILAVLALCTQILFSL #:H.influe.F:rem: FIVHQISWVDIFRSVTFGLLTAPFVIYFFTLLVEKLEHSRLDLSSSVNRLENEVAERI #:H.influe.F:rem: AAQKKLSQALEKLEKNSRDKSTLLATISHEFRTPLNGIVGLSQILLDDELDDLQRNYL #:H.influe.F:rem: KTINISAVSLGYIFSDIIDLEKIDASRIELNRQPTDFPALLNDIYNFASFLAKEKNLI #:H.influe.F:rem: FSLELEPNLPNWLNLDRVRLSQILWNLISNAVKFTDQGNIILKIMRNQDCYHFIVKDT #:H.influe.F:rem: GMGISPEEQKHIFEMYYQVKESRQQSAGSGIGLAISKNLAQLMGRGFNS" #:H.influe.F:rem: rRNA complement(9478..9592) #:H.influe.F:rem: /gene="rrnF 5S" #:H.influe.F:rem: /note="putative" #:H.influe.F:rem: /product="5S rRNA" #:H.influe.F:rem: rRNA complement(9839..12735) #:H.influe.F:rem: /gene="rrnF 23S" #:H.influe.F:rem: /note="putative" #:H.influe.F:rem: /product="23S rRNA" #:H.influe.F:rem:BASE COUNT 4032 a 2726 c 2260 g 3875 t 3 others #:H.influe.F:rem:ORIGIN #:H.influe.E:name:Haemophilus influenzae #:H.influe.E:subsp: #:H.influe.E:strain:strain Rd #:H.influe.E:atcc: #:H.influe.E:acs:U32697 L42023 #:H.influe.E:auth: #:H.influe.E:title: #:H.influe.E:jour: #:H.influe.E:who: #:H.influe.E:date: #:H.influe.E:rem:LOCUS HIU32697 9932 bp DNA BCT 02-AUG-1995 #:H.influe.E:rem:DEFINITION Haemophilus influenzae rrnE 5S, rrnE 23S, tRNA-Glu-A, rrnE 16S, #:H.influe.E:rem: tRNA-Pro-A, tRNA-His-A, tRNA-His-B, tRNA-Arg-A, tRNA-Met-A genes #:H.influe.E:rem: from bases 122174 to 132105 of the complete genome. #:H.influe.E:rem:ACCESSION U32697 L42023 #:H.influe.E:rem:KEYWORDS . #:H.influe.E:rem:SOURCE Haemophilus influenzae (strain Rd). #:H.influe.E:rem: ORGANISM Haemophilus influenzae #:H.influe.E:rem: Eubacteria; Proteobacteria; gamma subdivision; Pasteurellaceae; #:H.influe.E:rem: Haemophilus. #:H.influe.E:rem:REFERENCE 1 (bases 1 to 9932) #:H.influe.E:rem: AUTHORS Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A., #:H.influe.E:rem: Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F., #:H.influe.E:rem: Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G., FitzHugh,W., #:H.influe.E:rem: Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R., Liu,L.-I., #:H.influe.E:rem: Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A., Spriggs,T., #:H.influe.E:rem: Hedblom,E., Cotton,M.D., Utterback,T.R., Hanna,M.C., Nguyen,D.T., #:H.influe.E:rem: Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L., #:H.influe.E:rem: Fuhrmann,J.L., Geoghagen,N.S.M., Gnehm,C.L., McDonald,L.A., #:H.influe.E:rem: Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C. #:H.influe.E:rem: TITLE Whole-genome random sequencing and assembly of Haemophilus #:H.influe.E:rem: influenzae Rd #:H.influe.E:rem: JOURNAL Science 269, 496-512 (1995) #:H.influe.E:rem:REFERENCE 2 (bases 1 to 9932) #:H.influe.E:rem: AUTHORS White,O. #:H.influe.E:rem: TITLE Direct Submission #:H.influe.E:rem: JOURNAL Submitted (31-JUL-1995) The Institute for Genomic Research, 932 #:H.influe.E:rem: Clopper Rd., Gaithersburg, MD 20878, USA #:H.influe.E:rem:COMMENT #:H.influe.E:rem: Address all correspondence to: #:H.influe.E:rem: J. Craig Venter #:H.influe.E:rem: The Institute for Genomic Research #:H.influe.E:rem: 932 Clopper Rd, Gaithersburg, MD, 20878 #:H.influe.E:rem: (New address as of Sept 9, 1995: 9712 Medical Center Dr, #:H.influe.E:rem: Rockville, MD, 20850) #:H.influe.E:rem: Jean-Francois Tomb, Brian A. Dougherty, and #:H.influe.E:rem: Hamilton O. Smith are with the Johns Hopkins University School of #:H.influe.E:rem: Medicine, Baltimore, MD, 21205. #:H.influe.E:rem: Joseph M. Merrick is with the State University of New York, #:H.influe.E:rem: Department of Microbiology, Buffalo, NY, 14214. #:H.influe.E:rem: Chris Fields' current address is The National Center for Genome #:H.influe.E:rem: Resources, Sante Fe, NM, 87505. #:H.influe.E:rem: Keith McKenney is with the National Institute for Standards and #:H.influe.E:rem: Technology, Gaithersburg, MD, 20878. #:H.influe.E:rem: All other authors are with The Institute for Genomic Research, 932 #:H.influe.E:rem: Clopper Rd, Gaithersburg, MD, 20878. #:H.influe.E:rem: Predicted open reading frames were determined using GeneMark #:H.influe.E:rem: software, kindly supplied by Mark Borodovsky, Georgia Institute of #:H.influe.E:rem: Technology, Atlanta, GA, 30332. e-mail: mark@amber.gatech.edu #:H.influe.E:rem: Submitted by: Robert D. Fleischmann e-mail: rdfleisc@tigr.org #:H.influe.E:rem: Annotation: Owen White e-mail: owhite@tigr.org #:H.influe.E:rem: Biological role information, putative identifications, sequence #:H.influe.E:rem: alignments, on-line name and sequence search capability are #:H.influe.E:rem: available at TIGR's World Wide Web site #:H.influe.E:rem: (URL: http://www.tigr.org/). #:H.influe.E:rem: NCBI gi: 925338 #:H.influe.E:rem:FEATURES Location/Qualifiers #:H.influe.E:rem: source 1..9932 #:H.influe.E:rem: /organism="Haemophilus influenzae" #:H.influe.E:rem: /strain="Rd" #:H.influe.E:rem: CDS complement(139..255) #:H.influe.E:rem: /standard_name="HI0114" #:H.influe.E:rem: /note="identified by GeneMark; putative; Method: #:H.influe.E:rem: conceptual translation supplied by author. NCBI gi: #:H.influe.E:rem: 925339" #:H.influe.E:rem: /codon_start=1 #:H.influe.E:rem: /product="H. influenzae predicted coding region HI0114" #:H.influe.E:rem: /translation="MRTTGYIVWGILIGKKGKLEEMCIDFVVKLDAKLYLNF" #:H.influe.E:rem: rRNA complement(677..791) #:H.influe.E:rem: /gene="rrnE 5S" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="5S rRNA" #:H.influe.E:rem: rRNA complement(1039..3935) #:H.influe.E:rem: /gene="rrnE 23S" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="23S rRNA" #:H.influe.E:rem: tRNA complement(4210..4282) #:H.influe.E:rem: /gene="tRNA-Glu-A" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="transfer RNA-Glu" #:H.influe.E:rem: rRNA complement(4414..5952) #:H.influe.E:rem: /gene="rrnE 16S" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="16S rRNA" #:H.influe.E:rem: tRNA complement(6133..6206) #:H.influe.E:rem: /gene="tRNA-Pro-A" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="transfer RNA-Pro" #:H.influe.E:rem: tRNA complement(6155..6303) #:H.influe.E:rem: /gene="tRNA-His-A" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="transfer RNA-His" #:H.influe.E:rem: tRNA complement(6231..6303) #:H.influe.E:rem: /gene="tRNA-His-B" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="transfer RNA-His" #:H.influe.E:rem: tRNA complement(6333..6406) #:H.influe.E:rem: /gene="tRNA-Arg-A" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="transfer RNA-Arg" #:H.influe.E:rem: CDS complement(6555..8192) #:H.influe.E:rem: /standard_name="HI0115" #:H.influe.E:rem: /note="similar to GB:X73124 (Bacillus subtilis) percent #:H.influe.E:rem: identity: 30.7; identified by sequence similarity; #:H.influe.E:rem: putative; Method: conceptual translation supplied by #:H.influe.E:rem: author. NCBI gi: 925340" #:H.influe.E:rem: /codon_start=1 #:H.influe.E:rem: /product="hypothetical protein (GB:X73124_20)" #:H.influe.E:rem: /translation="MQVKRLYVKLSRRQLLMRSGWQVGSPLVDPMCGSGTLLIEAAQM #:H.influe.E:rem: EAKIAPQLYRLHWGFDFWKAHNQSAWEKVKNEAIELAEEKQREIQPHFYGFDLDHRVL #:H.influe.E:rem: KKAQKNAQNAGVSHLIKWQQADVAALKNPRLNEVGTVICNPPYGERLGTTPALIALYS #:H.influe.E:rem: VFGQRLKKEFCGWNVSVFSSESTLLDCLRMRASRQFKAKNGPLDCVQKNYQVSERKSD #:H.influe.E:rem: AITDEKELEFNRTSEVAPDFANRLQKNIKKISKWAKQQELDAYRLYDADLPEYNLAVD #:H.influe.E:rem: RYADYIVVQEYAAPKNIDENKARQRLLDAVTATLQVTGVETNKLILKVRQKQKGTNQY #:H.influe.E:rem: EKLANKGEYFYVNEYGTQLWVNLTDYLDTGLFLDHRLTRKMIGELAKGKDFLNLFAYT #:H.influe.E:rem: GSATVHAALGGAKSTTTVDMSNTYLNWAEQNLILNDIEGKQHKLIQADCLQWLEKCDR #:H.influe.E:rem: QFDLIFADPPTFSNSKRMEESWDVQRDHVKLMRNLKRVLSNNGTIVFSNNKRGFKMNL #:H.influe.E:rem: VALEELGLSAIEISHKTLPLDFERNKQIHNCWMIQHI" #:H.influe.E:rem: CDS complement(8074..8691) #:H.influe.E:rem: /standard_name="HI0116" #:H.influe.E:rem: /note="identified by GeneMark; putative; Method: #:H.influe.E:rem: conceptual translation supplied by author. NCBI gi: #:H.influe.E:rem: 925341" #:H.influe.E:rem: /codon_start=1 #:H.influe.E:rem: /product="H. influenzae predicted coding region HI0116" #:H.influe.E:rem: /translation="MKQLFATTSRGFEELLKVELTELGAQEAKVVQGGVHYQADDETL #:H.influe.E:rem: YRTLLWSRLASRILFPLIETKIYSDLDLYAAVSGFNWLAQFDERVTFFVDFNGTNQEI #:H.influe.E:rem: RHTQFGAMRVKDGIVDYFERQGKTRPDVDKIQPDVRIHAYLNRENLVISLDLSGEALH #:H.influe.E:rem: LRGYREDAGQAPLRETLAAAIVNAFRLASGFSISRSNVWFRYAFN" #:H.influe.E:rem: tRNA complement(8825..8898) #:H.influe.E:rem: /gene="tRNA-Met-A" #:H.influe.E:rem: /note="putative" #:H.influe.E:rem: /product="transfer RNA-Met" #:H.influe.E:rem: CDS 9383..9634 #:H.influe.E:rem: /standard_name="HI0117" #:H.influe.E:rem: /note="identified by GeneMark; putative; Method: #:H.influe.E:rem: conceptual translation supplied by author. NCBI gi: #:H.influe.E:rem: 925342" #:H.influe.E:rem: /codon_start=1 #:H.influe.E:rem: /product="H. influenzae predicted coding region HI0117" #:H.influe.E:rem: /translation="MKRITNWVLSGANINELTQFNIQPQIMRGFDGFQNVLMTGYYSP #:H.influe.E:rem: ILYARHSPQGQFKNPIYRMPVKKRLSRAQIYAGALAEKD" #:H.influe.E:rem:BASE COUNT 2650 a 2455 c 1761 g 3063 t 3 others #:H.influe.E:rem:ORIGIN #:H.influe.D:name:Haemophilus influenzae #:H.influe.D:subsp: #:H.influe.D:strain:strain Rd #:H.influe.D:atcc: #:H.influe.D:acs:U32847 L42023 #:H.influe.D:auth: #:H.influe.D:title: #:H.influe.D:jour: #:H.influe.D:who: #:H.influe.D:date: #:H.influe.D:rem:LOCUS HIU32847 12496 bp DNA BCT 02-AUG-1995 #:H.influe.D:rem:DEFINITION Haemophilus influenzae rrnD 5S, rrnD 23S, tRNA-Ala-D, tRNA-Ile-C, #:H.influe.D:rem: rrnD 16S, recG, spoT genes from bases 1815745 to 1828240 of the #:H.influe.D:rem: complete genome. #:H.influe.D:rem:ACCESSION U32847 L42023 #:H.influe.D:rem:KEYWORDS . #:H.influe.D:rem:SOURCE Haemophilus influenzae (strain Rd). #:H.influe.D:rem: ORGANISM Haemophilus influenzae #:H.influe.D:rem: Eubacteria; Proteobacteria; gamma subdivision; Pasteurellaceae; #:H.influe.D:rem: Haemophilus. #:H.influe.D:rem:REFERENCE 1 (bases 1 to 12496) #:H.influe.D:rem: AUTHORS Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A., #:H.influe.D:rem: Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F., #:H.influe.D:rem: Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G., FitzHugh,W., #:H.influe.D:rem: Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R., Liu,L.-I., #:H.influe.D:rem: Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A., Spriggs,T., #:H.influe.D:rem: Hedblom,E., Cotton,M.D., Utterback,T.R., Hanna,M.C., Nguyen,D.T., #:H.influe.D:rem: Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L., #:H.influe.D:rem: Fuhrmann,J.L., Geoghagen,N.S.M., Gnehm,C.L., McDonald,L.A., #:H.influe.D:rem: Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C. #:H.influe.D:rem: TITLE Whole-genome random sequencing and assembly of Haemophilus #:H.influe.D:rem: influenzae Rd #:H.influe.D:rem: JOURNAL Science 269, 496-512 (1995) #:H.influe.D:rem:REFERENCE 2 (bases 1 to 12496) #:H.influe.D:rem: AUTHORS White,O. #:H.influe.D:rem: TITLE Direct Submission #:H.influe.D:rem: JOURNAL Submitted (31-JUL-1995) The Institute for Genomic Research, 932 #:H.influe.D:rem: Clopper Rd., Gaithersburg, MD 20878, USA #:H.influe.D:rem:COMMENT #:H.influe.D:rem: Address all correspondence to: #:H.influe.D:rem: J. Craig Venter #:H.influe.D:rem: The Institute for Genomic Research #:H.influe.D:rem: 932 Clopper Rd, Gaithersburg, MD, 20878 #:H.influe.D:rem: (New address as of Sept 9, 1995: 9712 Medical Center Dr, Rockville, #:H.influe.D:rem: MD, 20850) #:H.influe.D:rem: Jean-Francois Tomb, Brian A. Dougherty, and #:H.influe.D:rem: Hamilton O. Smith are with the Johns Hopkins University School of #:H.influe.D:rem: Medicine, Baltimore, MD, 21205. #:H.influe.D:rem: Joseph M. Merrick is with the State University of New York, #:H.influe.D:rem: Department of Microbiology, Buffalo, NY, 14214. #:H.influe.D:rem: Chris Fields' current address is The National Center for Genome #:H.influe.D:rem: Resources, Sante Fe, NM, 87505. #:H.influe.D:rem: Keith McKenney is with the National Institute for Standards and #:H.influe.D:rem: Technology, Gaithersburg, MD, 20878. #:H.influe.D:rem: All other authors are with The Institute for Genomic Research, 932 #:H.influe.D:rem: Clopper Rd, Gaithersburg, MD, 20878. #:H.influe.D:rem: Predicted open reading frames were determined using GeneMark #:H.influe.D:rem: software, kindly supplied by Mark Borodovsky, Georgia Institute of #:H.influe.D:rem: Technology, Atlanta, GA, 30332. e-mail: mark@amber.gatech.edu #:H.influe.D:rem: Submitted by: Robert D. Fleischmann e-mail: rdfleisc@tigr.org #:H.influe.D:rem: Annotation: Owen White e-mail: owhite@tigr.org #:H.influe.D:rem: Biological role information, putative identifications, sequence #:H.influe.D:rem: alignments, on-line name and sequence search capability are #:H.influe.D:rem: available at TIGR's World Wide Web site #:H.influe.D:rem: (URL: http://www.tigr.org/). #:H.influe.D:rem: NCBI gi: 926830 #:H.influe.D:rem:FEATURES Location/Qualifiers #:H.influe.D:rem: source 1..12496 #:H.influe.D:rem: /organism="Haemophilus influenzae" #:H.influe.D:rem: /strain="Rd" #:H.influe.D:rem: rRNA complement(147..261) #:H.influe.D:rem: /gene="rrnD 5S" #:H.influe.D:rem: /note="putative" #:H.influe.D:rem: /product="5S rRNA" #:H.influe.D:rem: rRNA complement(508..3404) #:H.influe.D:rem: /gene="rrnD 23S" #:H.influe.D:rem: /note="putative" #:H.influe.D:rem: /product="23S rRNA" #:H.influe.D:rem: tRNA complement(3814..3886) #:H.influe.D:rem: /gene="tRNA-Ala-D" #:H.influe.D:rem: /note="putative" #:H.influe.D:rem: /product="transfer RNA-Ala" #:H.influe.D:rem: tRNA complement(3975..4048) #:H.influe.D:rem: /gene="tRNA-Ile-C" #:H.influe.D:rem: /note="putative" #:H.influe.D:rem: /product="transfer RNA-Ile" #:H.influe.D:rem: rRNA complement(4128..5666) #:H.influe.D:rem: /gene="rrnD 16S" #:H.influe.D:rem: /note="putative" #:H.influe.D:rem: /product="16S rRNA" #:H.influe.D:rem: CDS complement(8231..10312) #:H.influe.D:rem: /gene="recG" #:H.influe.D:rem: /standard_name="HI1740" #:H.influe.D:rem: /note="similar to GB:L10328 (Escherichia coli) percent #:H.influe.D:rem: identity: 66.5; identified by sequence similarity; #:H.influe.D:rem: putative; Method: conceptual translation supplied by #:H.influe.D:rem: author. NCBI gi: 926831" #:H.influe.D:rem: /codon_start=1 #:H.influe.D:rem: /product="DNA recombinase" #:H.influe.D:rem: /translation="MSLELLDAVPLTSLSGVGAAISNKLAKIGIHNLQDLLFHLPIRY #:H.influe.D:rem: EDRTRITLIANLRPEQYFTIEGIVQTCEVAFGRRPILSVSLSDGTSKIMLRFFNFNAG #:H.influe.D:rem: MRNSFQVGVRVKAFGEVKRGRHMPEIHHPEYQIVRDNAPIVLEETLTPIYSTTEGLKQ #:H.influe.D:rem: NSLRKLTDQALALLDKVQIAEILPNEFNPHQYSLKEALRLLHRPPPDISLEMLEQGKH #:H.influe.D:rem: PAQQRLIFEELLAHNLAMQKVRLGTQQFSALPLHYQTDLKQRFLATLPFQPTNAQKRV #:H.influe.D:rem: VSDIEQDLIKDYPMMRLVQGDVGSGKTLVAALAALTAIDNGKQVALMAPTEILAEQHA #:H.influe.D:rem: NNFRRWFKPFGIEVGWLAGKVKGKSRQAELEKIKTGAVQMVVGTHALFQEEVEFSDLA #:H.influe.D:rem: LVIIDEQHRFGVHQRLMLREKGEKAGFYPHQLIMTATPIPRTLAMTVYADLDTSIIDE #:H.influe.D:rem: LPPGRTPITTVVVSEERRAEIVMRVKNACVNEKRQAYWVCTLIDESEVLEAQAAEAIW #:H.influe.D:rem: EDLTKALPMLNIGLVHGRMKPQEKQDVMMRFKNAELDLLVATTVIEVGVDVPNASLMI #:H.influe.D:rem: IENAERLGLSQLHQLRGRVGRGCTASFCVLMYKPPLGKVSQKRLQVLRDSQDGFVISE #:H.influe.D:rem: KDLEIRGPGEVLGTKQTGIAELRVANLMRDRKMIPTVQHYAKSLIQKYPDVAESLIRR #:H.influe.D:rem: WLNNKEIYSNA" #:H.influe.D:rem: CDS complement(10309..12342) #:H.influe.D:rem: /gene="spoT" #:H.influe.D:rem: /standard_name="HI1741" #:H.influe.D:rem: /note="similar to GB:L10328 (Escherichia coli) percent #:H.influe.D:rem: identity: 58.8; identified by sequence similarity; #:H.influe.D:rem: putative; Method: conceptual translation supplied by #:H.influe.D:rem: author. NCBI gi: 926832" #:H.influe.D:rem: /codon_start=1 #:H.influe.D:rem: /product="penta-phosphate #:H.influe.D:rem: guanosine-3'-pyrophosphohydrolase" #:H.influe.D:rem: /translation="MIARDAHEGQFRSSGEPYITHPVAVASIIAQLHLDHEAVMAALL #:H.influe.D:rem: HDVIEDTPYTEEQLKEEFGASVAEIVDGVSKLDKLKFRTRQEAQVENFRKMILAMTRD #:H.influe.D:rem: IRVVLIKLADRTHNMRTLGSLRPDKRRRIAKETLEIYCPLAHRLGIEHIKNELEDLSF #:H.influe.D:rem: QAMHPHRYEVLKKLVDVARSNRQDLIERISQEIKVRLENSGIFARVWGREKHLYKIYQ #:H.influe.D:rem: KMRIKDQEFHSIMDIYAFRVIVKNVDDCYRVLGQMHNLYKPRPGRVKDYIAVPKANGY #:H.influe.D:rem: QSLQTSMIGPKGVPVEVHIHTEDMEQVAEMGITAHWVYKENGKNDSTTAQIRVQRWLQ #:H.influe.D:rem: SLVEIQQSVGNSFEFIENVKSEFFPKEIYVFTPKGRIVELPMGATAVDFAYAVHSDVG #:H.influe.D:rem: NTCVGVTVEHKPYPLSKALESGQTVNIITDPNAHPEVAWLNFVVTARAKTRIRHYLKQ #:H.influe.D:rem: RCEEDAVKLGEVELNVALQPHNLGDFSIQQIRTVLDALALSSLDELLREIGLGNQSAS #:H.influe.D:rem: MIAHQFVGVPLESANTKNLEFESKILTIAPMQVGKTQFAQCCHPILGDPIVGCCTEKN #:H.influe.D:rem: TVVVHHQHCASLKNACRQSLAKWDNVQSAVNFEAELQIEILNEQNALLSLMTAISASE #:H.influe.D:rem: SSLQNIWTEELENNLLLVILQVCVKDIKHLANIVHRIKGITGVVNVKRNINEL" #:H.influe.D:rem:BASE COUNT 3316 a 3135 c 2250 g 3795 t #:H.influe.D:rem:ORIGIN #:H.influe.C:name:Haemophilus influenzae #:H.influe.C:subsp: #:H.influe.C:strain:strain Rd #:H.influe.C:atcc: #:H.influe.C:acs:U32755 L42023 #:H.influe.C:auth: #:H.influe.C:title: #:H.influe.C:jour: #:H.influe.C:who: #:H.influe.C:date: #:H.influe.C:rem:LOCUS HIU32755 10559 bp DNA BCT 02-AUG-1995 #:H.influe.C:rem:DEFINITION Haemophilus influenzae htpX, pepQ, rrnC 16S, tRNA-Ile-B, #:H.influe.C:rem: tRNA-Ala-C, rrnC 23S, rrnC 5S genes from bases 766819 to 777377 of #:H.influe.C:rem: the complete genome. #:H.influe.C:rem:ACCESSION U32755 L42023 #:H.influe.C:rem:KEYWORDS . #:H.influe.C:rem:SOURCE Haemophilus influenzae (strain Rd). #:H.influe.C:rem: ORGANISM Haemophilus influenzae #:H.influe.C:rem: Eubacteria; Proteobacteria; gamma subdivision; Pasteurellaceae; #:H.influe.C:rem: Haemophilus. #:H.influe.C:rem:REFERENCE 1 (bases 1 to 10559) #:H.influe.C:rem: AUTHORS Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A., #:H.influe.C:rem: Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F., #:H.influe.C:rem: Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G., FitzHugh,W., #:H.influe.C:rem: Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R., Liu,L.-I., #:H.influe.C:rem: Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A., Spriggs,T., #:H.influe.C:rem: Hedblom,E., Cotton,M.D., Utterback,T.R., Hanna,M.C., Nguyen,D.T., #:H.influe.C:rem: Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L., #:H.influe.C:rem: Fuhrmann,J.L., Geoghagen,N.S.M., Gnehm,C.L., McDonald,L.A., #:H.influe.C:rem: Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C. #:H.influe.C:rem: TITLE Whole-genome random sequencing and assembly of Haemophilus #:H.influe.C:rem: influenzae Rd #:H.influe.C:rem: JOURNAL Science 269, 496-512 (1995) #:H.influe.C:rem:REFERENCE 2 (bases 1 to 10559) #:H.influe.C:rem: AUTHORS White,O. #:H.influe.C:rem: TITLE Direct Submission #:H.influe.C:rem: JOURNAL Submitted (31-JUL-1995) The Institute for Genomic Research, 932 #:H.influe.C:rem: Clopper Rd., Gaithersburg, MD 20878, USA #:H.influe.C:rem:COMMENT #:H.influe.C:rem: Address all correspondence to: #:H.influe.C:rem: J. Craig Venter #:H.influe.C:rem: The Institute for Genomic Research #:H.influe.C:rem: 932 Clopper Rd, Gaithersburg, MD, 20878 #:H.influe.C:rem: (New address as of Sept 9, 1995: 9712 Medical Center Dr, #:H.influe.C:rem: Rockville, MD, 20850) #:H.influe.C:rem: Jean-Francois Tomb, Brian A. Dougherty, and #:H.influe.C:rem: Hamilton O. Smith are with the Johns Hopkins University School of #:H.influe.C:rem: Medicine, Baltimore, MD, 21205. #:H.influe.C:rem: Joseph M. Merrick is with the State University of New York, #:H.influe.C:rem: Department of Microbiology, Buffalo, NY, 14214. #:H.influe.C:rem: Chris Fields' current address is The National Center for Genome #:H.influe.C:rem: Resources, Sante Fe, NM, 87505. #:H.influe.C:rem: Keith McKenney is with the National Institute for Standards and #:H.influe.C:rem: Technology, Gaithersburg, MD, 20878. #:H.influe.C:rem: All other authors are with The Institute for Genomic Research, 932 #:H.influe.C:rem: Clopper Rd, Gaithersburg, MD, 20878. #:H.influe.C:rem: Predicted open reading frames were determined using GeneMark #:H.influe.C:rem: software, kindly supplied by Mark Borodovsky, Georgia Institute of #:H.influe.C:rem: Technology, Atlanta, GA, 30332. e-mail: mark@amber.gatech.edu #:H.influe.C:rem: Submitted by: Robert D. Fleischmann e-mail: rdfleisc@tigr.org #:H.influe.C:rem: Annotation: Owen White e-mail: owhite@tigr.org #:H.influe.C:rem: Biological role information, putative identifications, sequence #:H.influe.C:rem: alignments, on-line name and sequence search capability are #:H.influe.C:rem: available at TIGR's World Wide Web site #:H.influe.C:rem: (URL: http://www.tigr.org/). #:H.influe.C:rem: NCBI gi: 925757 #:H.influe.C:rem:FEATURES Location/Qualifiers #:H.influe.C:rem: source 1..10559 #:H.influe.C:rem: /organism="Haemophilus influenzae" #:H.influe.C:rem: /strain="Rd" #:H.influe.C:rem: CDS 110..961 #:H.influe.C:rem: /gene="htpX" #:H.influe.C:rem: /standard_name="HI0720" #:H.influe.C:rem: /note="similar to GB:M58470 (Escherichia coli) percent #:H.influe.C:rem: identity: 66.3; identified by sequence similarity; #:H.influe.C:rem: putative; Method: conceptual translation supplied by #:H.influe.C:rem: author. NCBI gi: 925758" #:H.influe.C:rem: /codon_start=1 #:H.influe.C:rem: /product="heat shock protein" #:H.influe.C:rem: /translation="MMRILLFLATNMAVMLVLGIILSVTGIAGNSTGGILIMALLFGF #:H.influe.C:rem: AGSLISLFLSKTMALRSVDGEVITQPRNQTERWLIDTVSRQAQKAGIPMPDVAIYHSP #:H.influe.C:rem: DVNAFATGATKSNSLVAVSTGLLNNMTEAEAEAVLAHEISHISNGDMVTMALLQGVLN #:H.influe.C:rem: TFVIFLSRVIATAVASSRNNNGEETRSSGIYFLVSMVLEMLFGVLASIIAMWFSRYRE #:H.influe.C:rem: FRADAGSASLVGKEKMIMALQRLQQLHEPQNLEGSLNAFMINGKRSELFMSHPPLEKR #:H.influe.C:rem: IEALRNL" #:H.influe.C:rem: CDS complement(1003..1284) #:H.influe.C:rem: /standard_name="HI0721" #:H.influe.C:rem: /note="similar to SP:P37618 (Escherichia coli) percent #:H.influe.C:rem: identity: 60.8; identified by sequence similarity; #:H.influe.C:rem: putative; Method: conceptual translation supplied by #:H.influe.C:rem: author. NCBI gi: 925759" #:H.influe.C:rem: /codon_start=1 #:H.influe.C:rem: /product="hypothetical protein (SP:P37618)" #:H.influe.C:rem: /translation="MRYDMVLLFKRKKNMSEISVTQTLDTLGLRCPEPVMLVRKNIRH #:H.influe.C:rem: LNDGEILLIIADDPATTRDIPSFCQFMDHTLLQCEVEKPPFKYWVKRGK" #:H.influe.C:rem: CDS 1358..1978 #:H.influe.C:rem: /gene="pepQ" #:H.influe.C:rem: /standard_name="HI0722" #:H.influe.C:rem: /note="similar to GB:X54687 (Escherichia coli) percent #:H.influe.C:rem: identity: 53.7; identified by sequence similarity; #:H.influe.C:rem: putative; Method: conceptual translation supplied by #:H.influe.C:rem: author. NCBI gi: 925760" #:H.influe.C:rem: /codon_start=1 #:H.influe.C:rem: /product="proline dipeptidase" #:H.influe.C:rem: /translation="MAEYLVPKSAVVFEEEIKKSRFITYLQHTEGLEDARAFWAKIKQ #:H.influe.C:rem: EHPNARHHCWAAVAGKPTDSLQLGFSDDGEPAGTAGKPMLSALQGSQLGEISAVVVRY #:H.influe.C:rem: YGGILLGTGGLVRAYGNGVQQALKLIESEIKVERTLFKLDCDYGQLRLVQQLCEKYQV #:H.influe.C:rem: EILSQGFQANIHLILGISEKTIEAFSSELTEKSSGRLVIQLLEIGE" #:H.influe.C:rem: CDS 1981..3252 #:H.influe.C:rem: /standard_name="HI0723" #:H.influe.C:rem: /note="similar to GP:M87049_81 (Escherichia coli) percent #:H.influe.C:rem: identity: 55.6; identified by sequence similarity; #:H.influe.C:rem: putative; Method: conceptual translation supplied by #:H.influe.C:rem: author. NCBI gi: 925761" #:H.influe.C:rem: /codon_start=1 #:H.influe.C:rem: /product="hypothetical protein (GP:M87049_81)" #:H.influe.C:rem: /translation="MRILSIIRIIGILVMCFSGTMLVPAFVALIYGDGGGKAFMQAFM #:H.influe.C:rem: LSLIAGTLLWWPCHHHKQELRSRDGFLIVVAFWLVLGSLATLPLLLFDSPHLTIASAV #:H.influe.C:rem: FEAFSGLTTTGATVMTGLDNLPKSILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGTQL #:H.influe.C:rem: YRAESSGPLKDQKSLPKISEVAKALWIIYASLTVLCAIAYWLSGMNLFDAIGHSFSTI #:H.influe.C:rem: SNGGFSTHDASIGYFNQASIYWVTTIFMLIGGVNFSLHISAFLALGKRNIWRNYWKDP #:H.influe.C:rem: EFRFFLTMQIIFIGIVSLSLYGYGLVSDINEAVTKGALQLTSMSMTAGYTIFDIDNLP #:H.influe.C:rem: PFIGLLLVISAVIGGCGGSTTGGLKAIRTLILWKQIDRELHSLIHPNLVQPIRIGKNR #:H.influe.C:rem: LAPRMIESIWAFFIILYWFIGGVFLLLFFVE" #:H.influe.C:rem: rRNA 3802..5340 #:H.influe.C:rem: /gene="rrnC 16S" #:H.influe.C:rem: /note="putative" #:H.influe.C:rem: /product="16S rRNA" #:H.influe.C:rem: tRNA 5420..5493 #:H.influe.C:rem: /gene="tRNA-Ile-B" #:H.influe.C:rem: /note="putative" #:H.influe.C:rem: /product="transfer RNA-Ile" #:H.influe.C:rem: tRNA 5582..5654 #:H.influe.C:rem: /gene="tRNA-Ala-C" #:H.influe.C:rem: /note="putative" #:H.influe.C:rem: /product="transfer RNA-Ala" #:H.influe.C:rem: rRNA 6064..8960 #:H.influe.C:rem: /gene="rrnC 23S" #:H.influe.C:rem: /note="putative" #:H.influe.C:rem: /product="23S rRNA" #:H.influe.C:rem: rRNA 9207..9321 #:H.influe.C:rem: /gene="rrnC 5S" #:H.influe.C:rem: /note="putative" #:H.influe.C:rem: /product="5S rRNA" #:H.influe.C:rem: CDS 9500..10060 #:H.influe.C:rem: /standard_name="HI0724" #:H.influe.C:rem: /note="similar to SP:P32130 (Escherichia coli) percent #:H.influe.C:rem: identity: 45.9; identified by sequence similarity; #:H.influe.C:rem: putative; Method: conceptual translation supplied by #:H.influe.C:rem: author. NCBI gi: 925762" #:H.influe.C:rem: /codon_start=1 #:H.influe.C:rem: /product="hypothetical protein (SP:P32130)" #:H.influe.C:rem: /translation="MARKKKTRRITDIMPIRKADKKIDITKARSGKKLTCYELDAKAR #:H.influe.C:rem: EDKKKRKHKGLASGSRHSAVEEKANKLQNEIKDPKIGSKKKIPLVVEFVNKPEKGQVI #:H.influe.C:rem: PVIKQVKKQDPMKELENLENNEILNELLDALDAGKTISKSDQQFVDECLDRISELMEE #:H.influe.C:rem: LGIEDEDESEDDLYRTFERMDINQFR" #:H.influe.C:rem: CDS 10064..10504 #:H.influe.C:rem: /standard_name="HI0725" #:H.influe.C:rem: /note="identified by GeneMark; putative; Method: #:H.influe.C:rem: conceptual translation supplied by author. NCBI gi: #:H.influe.C:rem: 925763" #:H.influe.C:rem: /codon_start=1 #:H.influe.C:rem: /product="H. influenzae predicted coding region HI0725" #:H.influe.C:rem: /translation="MIWIFFVIALFLVTGLTLYAIRLLKQLKVQKELIAKAKNNRVIR #:H.influe.C:rem: LKESIDIIARAMQSGECNLSEGVMRLTMLLRPFGKNLSSYPAMANLYEVVRDMPTHDD #:H.influe.C:rem: RKLLEKRERMRLDLARESAEAQFEKNIKQELYILLEDIKSIELI" #:H.influe.C:rem:BASE COUNT 3180 a 1809 c 2642 g 2928 t #:H.influe.C:rem:ORIGIN #:H.influe.B:name:Haemophilus influenzae #:H.influe.B:subsp: #:H.influe.B:strain:strain Rd #:H.influe.B:atcc: #:H.influe.B:acs:U32745 L42023 #:H.influe.B:auth: #:H.influe.B:title: #:H.influe.B:jour: #:H.influe.B:who: #:H.influe.B:date: #:H.influe.B:rem:LOCUS HIU32745 10385 bp DNA BCT 02-AUG-1995 #:H.influe.B:rem:DEFINITION Haemophilus influenzae tRNA-Glu-C, rrnB 23S, rrnB 5S, def, fmt, #:H.influe.B:rem: trkA, rpoE, mclA genes from bases 658096 to 668480 of the complete #:H.influe.B:rem: genome. #:H.influe.B:rem:ACCESSION U32745 L42023 #:H.influe.B:rem:KEYWORDS . #:H.influe.B:rem:SOURCE Haemophilus influenzae (strain Rd). #:H.influe.B:rem: ORGANISM Haemophilus influenzae #:H.influe.B:rem: Eubacteria; Proteobacteria; gamma subdivision; Pasteurellaceae; #:H.influe.B:rem: Haemophilus. #:H.influe.B:rem:REFERENCE 1 (bases 1 to 10385) #:H.influe.B:rem: AUTHORS Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A., #:H.influe.B:rem: Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F., #:H.influe.B:rem: Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G., FitzHugh,W., #:H.influe.B:rem: Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R., Liu,L.-I., #:H.influe.B:rem: Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A., Spriggs,T., #:H.influe.B:rem: Hedblom,E., Cotton,M.D., Utterback,T.R., Hanna,M.C., Nguyen,D.T., #:H.influe.B:rem: Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L., #:H.influe.B:rem: Fuhrmann,J.L., Geoghagen,N.S.M., Gnehm,C.L., McDonald,L.A., #:H.influe.B:rem: Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C. #:H.influe.B:rem: TITLE Whole-genome random sequencing and assembly of Haemophilus #:H.influe.B:rem: influenzae Rd #:H.influe.B:rem: JOURNAL Science 269, 496-512 (1995) #:H.influe.B:rem:REFERENCE 2 (bases 1 to 10385) #:H.influe.B:rem: AUTHORS White,O. #:H.influe.B:rem: TITLE Direct Submission #:H.influe.B:rem: JOURNAL Submitted (31-JUL-1995) The Institute for Genomic Research, 932 #:H.influe.B:rem: Clopper Rd., Gaithersburg, MD 20878, USA #:H.influe.B:rem:COMMENT #:H.influe.B:rem: Address all correspondence to: #:H.influe.B:rem: J. Craig Venter #:H.influe.B:rem: The Institute for Genomic Research #:H.influe.B:rem: 932 Clopper Rd, Gaithersburg, MD, 20878 #:H.influe.B:rem: (New address as of Sept 9, 1995: 9712 Medical Center Dr, #:H.influe.B:rem: Rockville, MD, 20850) #:H.influe.B:rem: Jean-Francois Tomb, Brian A. Dougherty, and #:H.influe.B:rem: Hamilton O. Smith are with the Johns Hopkins University School of #:H.influe.B:rem: Medicine, Baltimore, MD, 21205. #:H.influe.B:rem: Joseph M. Merrick is with the State University of New York, #:H.influe.B:rem: Department of Microbiology, Buffalo, NY, 14214. #:H.influe.B:rem: Chris Fields' current address is The National Center for Genome #:H.influe.B:rem: Resources, Sante Fe, NM, 87505. #:H.influe.B:rem: Keith McKenney is with the National Institute for Standards and #:H.influe.B:rem: Technology, Gaithersburg, MD, 20878. #:H.influe.B:rem: All other authors are with The Institute for Genomic Research, 932 #:H.influe.B:rem: Clopper Rd, Gaithersburg, MD, 20878. #:H.influe.B:rem: Predicted open reading frames were determined using GeneMark #:H.influe.B:rem: software, kindly supplied by Mark Borodovsky, Georgia Institute of #:H.influe.B:rem: Technology, Atlanta, GA, 30332. e-mail: mark@amber.gatech.edu #:H.influe.B:rem: Submitted by: Robert D. Fleischmann e-mail: rdfleisc@tigr.org #:H.influe.B:rem: Annotation: Owen White e-mail: owhite@tigr.org #:H.influe.B:rem: Biological role information, putative identifications, sequence #:H.influe.B:rem: alignments, on-line name and sequence search capability are #:H.influe.B:rem: available at TIGR's World Wide Web site #:H.influe.B:rem: (URL: http://www.tigr.org/). #:H.influe.B:rem: NCBI gi: 925655 #:H.influe.B:rem:FEATURES Location/Qualifiers #:H.influe.B:rem: source 1..10385 #:H.influe.B:rem: /organism="Haemophilus influenzae" #:H.influe.B:rem: /strain="Rd" #:H.influe.B:rem: tRNA 92..164 #:H.influe.B:rem: /gene="tRNA-Glu-C" #:H.influe.B:rem: /note="putative" #:H.influe.B:rem: /product="transfer RNA-Glu" #:H.influe.B:rem: rRNA 439..3335 #:H.influe.B:rem: /gene="rrnB 23S" #:H.influe.B:rem: /note="putative" #:H.influe.B:rem: /product="23S rRNA" #:H.influe.B:rem: rRNA 3582..3696 #:H.influe.B:rem: /gene="rrnB 5S" #:H.influe.B:rem: /note="putative" #:H.influe.B:rem: /product="5S rRNA" #:H.influe.B:rem: CDS 3923..4432 #:H.influe.B:rem: /gene="def" #:H.influe.B:rem: /standard_name="HI0622" #:H.influe.B:rem: /note="similar to SP:P27251 (Escherichia coli) percent #:H.influe.B:rem: identity: 65.1; identified by sequence similarity; #:H.influe.B:rem: putative; Method: conceptual translation supplied by #:H.influe.B:rem: author. NCBI gi: 925656" #:H.influe.B:rem: /codon_start=1 #:H.influe.B:rem: /product="polypeptide deformylase (formylmethionine #:H.influe.B:rem: deformylase)" #:H.influe.B:rem: /translation="MTALNVLIYPDDHLKVVCEPVTKVNDAIRKIVDDMFDTMYQEKG #:H.influe.B:rem: IGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGETGIEEGCLSIPGFRALVP #:H.influe.B:rem: RKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLSPLKRQRIKEKLI #:H.influe.B:rem: KYKKQIAKS" #:H.influe.B:rem: CDS 4525..5481 #:H.influe.B:rem: /gene="fmt" #:H.influe.B:rem: /standard_name="HI0623" #:H.influe.B:rem: /note="similar to GB:X63666 (Escherichia coli) percent #:H.influe.B:rem: identity: 65.0; identified by sequence similarity; #:H.influe.B:rem: putative; Method: conceptual translation supplied by #:H.influe.B:rem: author. NCBI gi: 925657" #:H.influe.B:rem: /codon_start=1 #:H.influe.B:rem: /product="methionyl-tRNA formyltransferase" #:H.influe.B:rem: /translation="MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAGRGK #:H.influe.B:rem: KLQASPVKQLAEQNNIPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAP #:H.influe.B:rem: RLGCLNVHGSILPRWRGAAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILP #:H.influe.B:rem: TETSTSLYNKLAELAPSALIDVLDNLENGKFIAEKQDGSQSNYAEKLSKEEAQLNWSL #:H.influe.B:rem: SAMQLERNIRAFNPWPIAYFSTEDKDGNAHTLKVYQAKVLPHQDKPAGTILSADKNGI #:H.influe.B:rem: QIATVDGVLNLLQLQSAGKKPMSAQDLLNGRAEWFTIGKVLA" #:H.influe.B:rem: CDS 5481..6836 #:H.influe.B:rem: /standard_name="HI0624" #:H.influe.B:rem: /note="similar to SP:P23866 (Escherichia coli) percent #:H.influe.B:rem: identity: 58.9; identified by sequence similarity; #:H.influe.B:rem: putative; Method: conceptual translation supplied by #:H.influe.B:rem: author. NCBI gi: 925658" #:H.influe.B:rem: /codon_start=1 #:H.influe.B:rem: /product="hypothetical protein (SP:P23866)" #:H.influe.B:rem: /translation="MKKFSSKTIKAKNSVKMTALSTRAIAANLILQVLDEGKSLSALI #:H.influe.B:rem: PEVQLSVKAQDLPLLQEICFGVCRVLPRLEQIIKRLVDKPLKGKTRIVHCLLLVGLYQ #:H.influe.B:rem: LLYMRVPAHAAVDEVVNATKSLKSDSFRGLVNAVLRRFLREQDEILAIIDKNWQTLHP #:H.influe.B:rem: EWFVNKLKKAYPNWREIIEANNQKPPMWLRVNSQKNALETYRTLLEEQGVSSKTSHHP #:H.influe.B:rem: NALCLDIPIAVQKLPHFEEGAVTVQDLSAQWAATLLEPKNEEWILDACAAPGGKTTHI #:H.influe.B:rem: LELAPQANVIALDVESHRLKRVEENLERLNQQAIVVCGDASKPDEWLAEIGKSAAKFD #:H.influe.B:rem: RILLDAPCSATGVIRRHPDIKWLRKETDIAQLVELQKKILSALWEKLKPNGVLLYATC #:H.influe.B:rem: SVLPEENCEQIQAFLNAHADAELLSLPFSDDKSAVGFQFIPQPNSGDGFYYAKLLKRA #:H.influe.B:rem: S" #:H.influe.B:rem: misc_feature 6849..8226 #:H.influe.B:rem: /gene="trkA" #:H.influe.B:rem: /standard_name="HI0625" #:H.influe.B:rem: /note="suspected CDS--internal stop codons preclude #:H.influe.B:rem: translation; Alignment algorithm indicates unresolved #:H.influe.B:rem: frameshift when compared to database match. Alignment #:H.influe.B:rem: available at (URL: http://www.tigr.org/); similar to #:H.influe.B:rem: SP:P23868 (Escherichia coli) percent identity: 65.8; #:H.influe.B:rem: identified by sequence similarity; putative" #:H.influe.B:rem: /product="TRK system potassium uptake protein" #:H.influe.B:rem: CDS 8299..8685 #:H.influe.B:rem: /standard_name="HI0626" #:H.influe.B:rem: /note="similar to GB:L29458 (Escherichia coli) percent #:H.influe.B:rem: identity: 70.8; identified by sequence similarity; #:H.influe.B:rem: putative; Method: conceptual translation supplied by #:H.influe.B:rem: author. NCBI gi: 925659" #:H.influe.B:rem: /codon_start=1 #:H.influe.B:rem: /product="hypothetical protein (GB:L29458_1)" #:H.influe.B:rem: /translation="MNFIKEFREFAMRGNVVDMAVGVIIGSAFGKIVSSLVSDIFTPV #:H.influe.B:rem: LGILTGGIDFKDMKFVLAQAQGDVPAVTLNYGLFIQNVIDFIIIAFAIFMMIKVINKV #:H.influe.B:rem: RKPEEKKTAPKAETLLTEIRDLLKNK" #:H.influe.B:rem: CDS 8775..9032 #:H.influe.B:rem: /standard_name="HI0627" #:H.influe.B:rem: /note="identified by GeneMark; putative; Method: #:H.influe.B:rem: conceptual translation supplied by author. NCBI gi: #:H.influe.B:rem: 925660" #:H.influe.B:rem: /codon_start=1 #:H.influe.B:rem: /product="H. influenzae predicted coding region HI0627" #:H.influe.B:rem: /translation="MKKYNKLRIEWDCRRGMLELDKIIMPFYLTHFHELTDDKKDIFI #:H.influe.B:rem: RLLASTDLQLFSWFFNLAKSQDVELQMMVEYIQKVQKIIIN" #:H.influe.B:rem: CDS 9140..9709 #:H.influe.B:rem: /gene="rpoE" #:H.influe.B:rem: /standard_name="HI0628" #:H.influe.B:rem: /note="similar to SP:P34086 (Escherichia coli) percent #:H.influe.B:rem: identity: 73.0; identified by sequence similarity; #:H.influe.B:rem: putative; Method: conceptual translation supplied by #:H.influe.B:rem: author. NCBI gi: 925661" #:H.influe.B:rem: /codon_start=1 #:H.influe.B:rem: /product="RNA polymerase sigma-E factor" #:H.influe.B:rem: /translation="MAEQLTDQALVERVQQGDKKAFNLLVSRYQNKVAGLLTRYVSRN #:H.influe.B:rem: DIPDVVQESFIKAYRSIESFRGESAFYTWLYRIAVNTAKNYLTAQGRRPPNEDILAED #:H.influe.B:rem: AENYDVGTHLRDVDTPENEMLSSELERIVFDTIHNLPEDLKTAITLRELEGLSYEDIA #:H.influe.B:rem: EIMDCPVGTVRSRIFRAREMIENKIQPLM" #:H.influe.B:rem: CDS 9734..10321 #:H.influe.B:rem: /gene="mclA" #:H.influe.B:rem: /standard_name="HI0629" #:H.influe.B:rem: /note="similar to GB:U10148 (Escherichia coli) percent #:H.influe.B:rem: identity: 40.1; identified by sequence similarity; #:H.influe.B:rem: putative; Method: conceptual translation supplied by #:H.influe.B:rem: author. NCBI gi: 925662" #:H.influe.B:rem: /codon_start=1 #:H.influe.B:rem: /product="negative rpo regulator" #:H.influe.B:rem: /translation="MQKEQLSAYMDGEQVETDLIDALLRDEELQASWHSFHTVRSVMR #:H.influe.B:rem: KESAVFLGADFTAKMADLIELEDVKKVDVIAVSQPEPEDAHNSVFMQKLKAFFAPMTQ #:H.influe.B:rem: VAVAAGVCLVAVLGVQSFNNKNDASNLPETPVLQTLPFNNAVQEVSYNAPSKDTLTSD #:H.influe.B:rem: QLEKKSRRIGAMLQNYELQRRMHSDALDVSSSQVR" #:H.influe.B:rem:BASE COUNT 3273 a 1774 c 2485 g 2853 t #:H.influe.B:rem:ORIGIN #:H.influe.A:name:Haemophilus influenzae #:H.influe.A:subsp: #:H.influe.A:strain:strain Rd #:H.influe.A:atcc: #:H.influe.A:acs:U32742 L42023 #:H.influe.A:auth: #:H.influe.A:title: #:H.influe.A:jour: #:H.influe.A:who: #:H.influe.A:date: #:H.influe.A:rem:LOCUS HIU32742 10375 bp DNA BCT 02-AUG-1995 #:H.influe.A:rem:DEFINITION Haemophilus influenzae tRNA-Ile-A, tRNA-Ala-B, rrnA 23S, rrnA 5S, #:H.influe.A:rem: tRNA-Asp-C, tRNA-Trp, hemY, hemX, cyaA genes from bases 624788 to #:H.influe.A:rem: 635162 of the complete genome. #:H.influe.A:rem:ACCESSION U32742 L42023 #:H.influe.A:rem:KEYWORDS . #:H.influe.A:rem:SOURCE Haemophilus influenzae (strain Rd). #:H.influe.A:rem: ORGANISM Haemophilus influenzae #:H.influe.A:rem: Eubacteria; Proteobacteria; gamma subdivision; Pasteurellaceae; #:H.influe.A:rem: Haemophilus. #:H.influe.A:rem:REFERENCE 1 (bases 1 to 10375) #:H.influe.A:rem: AUTHORS Fleischmann,R.D., Adams,M.D., White,O., Clayton,R.A., #:H.influe.A:rem: Kirkness,E.F., Kerlavage,A.R., Bult,C.J., Tomb,J.-F., #:H.influe.A:rem: Dougherty,B.A., Merrick,J.M., McKenney,K., Sutton,G., FitzHugh,W., #:H.influe.A:rem: Fields,C.A., Gocayne,J.D., Scott,J.D., Shirley,R., Liu,L.-I., #:H.influe.A:rem: Glodek,A., Kelley,J.M., Weidman,J.F., Phillips,C.A., Spriggs,T., #:H.influe.A:rem: Hedblom,E., Cotton,M.D., Utterback,T.R., Hanna,M.C., Nguyen,D.T., #:H.influe.A:rem: Saudek,D.M., Brandon,R.C., Fine,L.D., Fritchman,J.L., #:H.influe.A:rem: Fuhrmann,J.L., Geoghagen,N.S.M., Gnehm,C.L., McDonald,L.A., #:H.influe.A:rem: Small,K.V., Fraser,C.M., Smith,H.O. and Venter,J.C. #:H.influe.A:rem: TITLE Whole-genome random sequencing and assembly of Haemophilus #:H.influe.A:rem: influenzae Rd #:H.influe.A:rem: JOURNAL Science 269, 496-512 (1995) #:H.influe.A:rem:REFERENCE 2 (bases 1 to 10375) #:H.influe.A:rem: AUTHORS White,O. #:H.influe.A:rem: TITLE Direct Submission #:H.influe.A:rem: JOURNAL Submitted (31-JUL-1995) The Institute for Genomic Research, 932 #:H.influe.A:rem: Clopper Rd., Gaithersburg, MD 20878, USA #:H.influe.A:rem:COMMENT #:H.influe.A:rem: Address all correspondence to: #:H.influe.A:rem: J. Craig Venter #:H.influe.A:rem: The Institute for Genomic Research #:H.influe.A:rem: 932 Clopper Rd, Gaithersburg, MD, 20878 #:H.influe.A:rem: (New address as of Sept 9, 1995: 9712 Medical Center Dr, #:H.influe.A:rem: Rockville, MD, 20850) #:H.influe.A:rem: Jean-Francois Tomb, Brian A. Dougherty, and #:H.influe.A:rem: Hamilton O. Smith are with the Johns Hopkins University School of #:H.influe.A:rem: Medicine, Baltimore, MD, 21205. #:H.influe.A:rem: Joseph M. Merrick is with the State University of New York, #:H.influe.A:rem: Department of Microbiology, Buffalo, NY, 14214. #:H.influe.A:rem: Chris Fields' current address is The National Center for Genome #:H.influe.A:rem: Resources, Sante Fe, NM, 87505. #:H.influe.A:rem: Keith McKenney is with the National Institute for Standards and #:H.influe.A:rem: Technology, Gaithersburg, MD, 20878. #:H.influe.A:rem: All other authors are with The Institute for Genomic Research, 932 #:H.influe.A:rem: Clopper Rd, Gaithersburg, MD, 20878. #:H.influe.A:rem: Predicted open reading frames were determined using GeneMark #:H.influe.A:rem: software, kindly supplied by Mark Borodovsky, Georgia Institute of #:H.influe.A:rem: Technology, Atlanta, GA, 30332. e-mail: mark@amber.gatech.edu #:H.influe.A:rem: Submitted by: Robert D. Fleischmann e-mail: rdfleisc@tigr.org #:H.influe.A:rem: Annotation: Owen White e-mail: owhite@tigr.org #:H.influe.A:rem: Biological role information, putative identifications, sequence #:H.influe.A:rem: alignments, on-line name and sequence search capability are #:H.influe.A:rem: available at TIGR's World Wide Web site #:H.influe.A:rem: (URL: http://www.tigr.org/). #:H.influe.A:rem: NCBI gi: 925632 #:H.influe.A:rem:FEATURES Location/Qualifiers #:H.influe.A:rem: source 1..10375 #:H.influe.A:rem: /organism="Haemophilus influenzae" #:H.influe.A:rem: /strain="Rd" #:H.influe.A:rem: tRNA 66..139 #:H.influe.A:rem: /gene="tRNA-Ile-A" #:H.influe.A:rem: /note="putative" #:H.influe.A:rem: /product="transfer RNA-Ile" #:H.influe.A:rem: tRNA 228..300 #:H.influe.A:rem: /gene="tRNA-Ala-B" #:H.influe.A:rem: /note="putative" #:H.influe.A:rem: /product="transfer RNA-Ala" #:H.influe.A:rem: rRNA 710..3606 #:H.influe.A:rem: /gene="rrnA 23S" #:H.influe.A:rem: /note="putative" #:H.influe.A:rem: /product="23S rRNA" #:H.influe.A:rem: rRNA 3853..3967 #:H.influe.A:rem: /gene="rrnA 5S" #:H.influe.A:rem: /note="putative" #:H.influe.A:rem: /product="5S rRNA" #:H.influe.A:rem: tRNA 4145..4218 #:H.influe.A:rem: /gene="tRNA-Asp-C" #:H.influe.A:rem: /note="putative" #:H.influe.A:rem: /product="transfer RNA-Asp" #:H.influe.A:rem: tRNA 4250..4322 #:H.influe.A:rem: /gene="tRNA-Trp" #:H.influe.A:rem: /note="putative" #:H.influe.A:rem: /product="transfer RNA-Trp" #:H.influe.A:rem: CDS complement(4968..6254) #:H.influe.A:rem: /gene="hemY" #:H.influe.A:rem: /standard_name="HI0602" #:H.influe.A:rem: /note="similar to GP:M87049_33 (Escherichia coli) percent #:H.influe.A:rem: identity: 38.9; identified by sequence similarity; #:H.influe.A:rem: putative; Method: conceptual translation supplied by #:H.influe.A:rem: author. NCBI gi: 925633" #:H.influe.A:rem: /codon_start=1 #:H.influe.A:rem: /product="protoporphyrinogen oxidase (hemG) homolog" #:H.influe.A:rem: /translation="MFRVLFLMLTLLVGLVAGPYISGQQGYVRIETANRIIEMSITTL #:H.influe.A:rem: VIFFIISLAIIYAFEWGVTRFFRLSRSSYQWFSNRKRVKAQKQTLEGLVKMDEGDYAK #:H.influe.A:rem: AEKLIGKNAKHSAEPVLNLIKAAEAAQQRGDEFSANRYLIEATELAGSDNLLVEIART #:H.influe.A:rem: RILLQQNKLPAARSSVDSLLEMARRNKEVLKLAVEIYLRSKAYQALDKILDNVANSGL #:H.influe.A:rem: FNDEEFKDLRSKTENGLLDEKMNEEGIDGLLTWWNQQPRHRRNNIELKISLIQRLIDC #:H.influe.A:rem: NDHESATELTFEILKKLGDNTAISLPLCTQITRLQPEDNSKLLKLIEKRAKRVDEKQK #:H.influe.A:rem: CCINRALGYLYVRNNEFIKAADVFKNVIACPEQLEQNDLMMASYVFEQAGDKALAEQV #:H.influe.A:rem: RQESLKSVMAIQDVIPESAEEKTEENSTALLESKSE" #:H.influe.A:rem: CDS complement(6786..7478) #:H.influe.A:rem: /gene="hemX" #:H.influe.A:rem: /standard_name="HI0603" #:H.influe.A:rem: /note="similar to GB:M87049 (Escherichia coli) percent #:H.influe.A:rem: identity: 37.0; identified by sequence similarity; #:H.influe.A:rem: putative; Method: conceptual translation supplied by #:H.influe.A:rem: author. NCBI gi: 925634" #:H.influe.A:rem: /codon_start=1 #:H.influe.A:rem: /product="uroporphyrinogen III methylase" #:H.influe.A:rem: /translation="MAKEQPNDLTEQLTDTPKTAVEQAETMQSVPQTIVKKTGTALSL #:H.influe.A:rem: LAILVALGIGGAGYYFGQQQMAKIQQKLTALENQTGANLSSNNTNNNKRLTQLEQSLK #:H.influe.A:rem: TAQENIAQLEQLIVSKTGEITSLQTQMKQVSQLAIAQQPSDWLFSEADFLLNNALRKL #:H.influe.A:rem: VLDNDVDTAVSLLKLADETLVKVNNSQANEIRSAINQDLKQLLSLSSVDQNAIMQKLS #:H.influe.A:rem: QLANTVDELQRL" #:H.influe.A:rem: CDS 7783..10314 #:H.influe.A:rem: /gene="cyaA" #:H.influe.A:rem: /standard_name="HI0604" #:H.influe.A:rem: /note="similar to GB:L23824 (Haemophilus influenzae) #:H.influe.A:rem: percent identity: 100.0; identified by sequence #:H.influe.A:rem: similarity; putative; Method: conceptual translation #:H.influe.A:rem: supplied by author. NCBI gi: 925635" #:H.influe.A:rem: /codon_start=1 #:H.influe.A:rem: /product="adenylate cyclase" #:H.influe.A:rem: /translation="MECNLAQAKQWVSALDQRRFERALQGSGDAFQHVLAIVPLLLHL #:H.influe.A:rem: NHPQLPGYVIHAPSGIASFLASDYQKKWLTNEYGIHYADHKPSTLKSAVNFHEVFPPI #:H.influe.A:rem: LGVYVMGSFGSISQTSSSDLDTWICVRDGLSLDEYTLLTQKAKRISEWAMQFNVEINF #:H.influe.A:rem: YLMDQQRFRNEHYADPLTIENSGSAQYMLLLDEFYRSAVRLAGKPLLWLHLWVENEKD #:H.influe.A:rem: YEKEVARLITEGEIDPNDWVDFGGLGQFSANEYFGASLWHLYKGIDSPYKSVLKILLL #:H.influe.A:rem: EAYSKEYPNTCLIARTFKRDLLAGNTNPDHHFDPYIAILAKVTQYLTALSEFKRLDFV #:H.influe.A:rem: HRCFYVKATEDFARYQANNWRIRYMEILAQEWGWSAETVKHLNKRPFWKIKAVKENHD #:H.influe.A:rem: NIMKFLMLSYRNLVEFARKHHIHSSVVPQDINILSRKLYTAFEELPGKVSLLNTQISH #:H.influe.A:rem: NLSEAHLTFVEVRGNKHFKDGWYLINQPIHHIMFSKERVIEYGESLNKLVSWAYFNHL #:H.influe.A:rem: LTEKTELSIFSKNVTLSTLQRFVTNLRQSFPSTIAKQPKNSDLLNQCEIRSLFIAINL #:H.influe.A:rem: TTDPTSKVEEVLTGISSRDLFSFGSLEQSLVGSIDFTYRNVWNEIRTLHFEGQNAILL #:H.influe.A:rem: ALKVLSNKIYRGVNRPDSIQVYCYSERYRQDLRQLVMGLVNRCVSIQVGDIQQPCQTS #:H.influe.A:rem: RLRVAGKNWQLFFEDRGISLQEIGNESVCNEAESAVDFDEVLQTPIEDGETNQESRRY #:H.influe.A:rem: PPEMDAFASEGFLQFFFEDNSDHSFNVYILDESNHLEIYRHCDGEKDEKVREINQLYQ #:H.influe.A:rem: NAKQEGDKNPYNIVQHNFNYPQFYQLQNGKNGISIVPFKFRQMNK" #:H.influe.A:rem:BASE COUNT 3136 a 1879 c 2303 g 3056 t 1 others #:H.influe.A:rem:ORIGIN #:A.actino.1:name:Actinobacillus actinomycetemcomitans #:A.actino.1:subsp: #:A.actino.1:strain: #:A.actino.1:atcc: #:A.actino.1:acs:S44313 #:A.actino.1:auth:Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H #:A.actino.1:title: #:A.actino.1:jour: #:A.actino.1:who: #:A.actino.1:date: #:A.actino.1:rem:LOCUS S44313 1010 bp DNA BCT 12-NOV-1992 #:A.actino.1:rem:DEFINITION 23S ribosomal RNA [Actinobacillus actinomycetemcomitans, ATCC #:A.actino.1:rem: 43718, FDC Y4, serotype b, Genomic, 1010 nt] #:A.actino.1:rem:ACCESSION S44313 #:A.actino.1:rem:KEYWORDS . #:A.actino.1:rem:SOURCE Actinobacillus actinomycetemcomitans FDC Y4 ATCC 43718 serotype b #:A.actino.1:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.1:rem: Unclassified. #:A.actino.1:rem:REFERENCE 1 (bases 1 to 1010) #:A.actino.1:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.1:rem: Zambon,J.J. #:A.actino.1:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.1:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.1:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.1:rem: STANDARD full automatic #:A.actino.1:rem:COMMENT #:A.actino.1:rem: This entry [NCBI gibbsq 113118] was created by the journal scanning #:A.actino.1:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.1:rem: This sequence comes from Fig. 4. #:A.actino.1:rem:FEATURES Location/Qualifiers #:A.actino.1:rem: rRNA 1..1010 #:A.actino.1:rem: /partial #:A.actino.1:rem: /note="Description: 23S ribosomal RNA" #:A.actino.1:rem: source 1..1010 #:A.actino.1:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.1:rem:BASE COUNT 296 a 201 c 308 g 205 t #:A.actino.1:rem:ORIGIN #:A.actino.2:name:Actinobacillus actinomycetemcomitans #:A.actino.2:subsp: #:A.actino.2:strain: #:A.actino.2:atcc: #:A.actino.2:acs:S44631 #:A.actino.2:auth: #:A.actino.2:title: #:A.actino.2:jour: #:A.actino.2:who: #:A.actino.2:date: #:A.actino.2:rem:LOCUS S44631 112 bp rRNA BCT 12-NOV-1992 #:A.actino.2:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.2:rem: actinomycetemcomitans, ATCC 43717, SUNYAB 75, serotype a, rRNA #:A.actino.2:rem: Partial, 112 nt] #:A.actino.2:rem:ACCESSION S44631 #:A.actino.2:rem:KEYWORDS . #:A.actino.2:rem:SOURCE Actinobacillus actinomycetemcomitans SUNYAB 75 ATCC 43717 serotype #:A.actino.2:rem: a #:A.actino.2:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.2:rem: Unclassified. #:A.actino.2:rem:REFERENCE 1 (bases 1 to 112) #:A.actino.2:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.2:rem: Zambon,J.J. #:A.actino.2:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.2:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.2:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.2:rem: STANDARD full automatic #:A.actino.2:rem:COMMENT #:A.actino.2:rem: This entry [NCBI gibbsq 113123] was created by the journal scanning #:A.actino.2:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.2:rem: This sequence comes from Fig. 7. #:A.actino.2:rem:FEATURES Location/Qualifiers #:A.actino.2:rem: rRNA 1..112 #:A.actino.2:rem: /partial #:A.actino.2:rem: /note="Description: 23S ribosomal RNA" #:A.actino.2:rem: source 1..112 #:A.actino.2:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.2:rem:BASE COUNT 41 a 18 c 33 g 20 t #:A.actino.2:rem:ORIGIN #:A.actino.3:name:Actinobacillus actinomycetemcomitans #:A.actino.3:subsp: #:A.actino.3:strain: #:A.actino.3:atcc: #:A.actino.3:acs:S44319 #:A.actino.3:auth: #:A.actino.3:title: #:A.actino.3:jour: #:A.actino.3:who: #:A.actino.3:date: #:A.actino.3:rem:LOCUS S44319 114 bp rRNA BCT 12-NOV-1992 #:A.actino.3:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.3:rem: actinomycetemcomitans, ATCC 29522, serotype b, rRNA Partial, 114 #:A.actino.3:rem: nt] #:A.actino.3:rem:ACCESSION S44319 #:A.actino.3:rem:KEYWORDS . #:A.actino.3:rem:SOURCE Actinobacillus actinomycetemcomitans ATCC 29522 serotype b #:A.actino.3:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.3:rem: Unclassified. #:A.actino.3:rem:REFERENCE 1 (bases 1 to 114) #:A.actino.3:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.3:rem: Zambon,J.J. #:A.actino.3:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.3:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.3:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.3:rem: STANDARD full automatic #:A.actino.3:rem:COMMENT #:A.actino.3:rem: This entry [NCBI gibbsq 113122] was created by the journal scanning #:A.actino.3:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.3:rem: This sequence comes from Fig. 7. #:A.actino.3:rem:FEATURES Location/Qualifiers #:A.actino.3:rem: rRNA 1..114 #:A.actino.3:rem: /partial #:A.actino.3:rem: /note="Description: 23S ribosomal RNA" #:A.actino.3:rem: source 1..114 #:A.actino.3:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.3:rem:BASE COUNT 39 a 21 c 32 g 19 t 3 others #:A.actino.3:rem:ORIGIN #:A.actino.4:name:Actinobacillus actinomycetemcomitans #:A.actino.4:subsp: #:A.actino.4:strain: #:A.actino.4:atcc: #:A.actino.4:acs:S44637 #:A.actino.4:auth: #:A.actino.4:title: #:A.actino.4:jour: #:A.actino.4:who: #:A.actino.4:date: #:A.actino.4:rem:LOCUS S44637 61 bp rRNA BCT 12-NOV-1992 #:A.actino.4:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.4:rem: actinomycetemcomitans, SUNYaB 10DIT-d, serotype b, rRNA Partial, 61 #:A.actino.4:rem: nt] #:A.actino.4:rem:ACCESSION S44637 #:A.actino.4:rem:KEYWORDS . #:A.actino.4:rem:SOURCE Actinobacillus actinomycetemcomitans serotype b SUNYaB 10DIT-d #:A.actino.4:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.4:rem: Unclassified. #:A.actino.4:rem:REFERENCE 1 (bases 1 to 61) #:A.actino.4:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.4:rem: Zambon,J.J. #:A.actino.4:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.4:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.4:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.4:rem: STANDARD full automatic #:A.actino.4:rem:COMMENT #:A.actino.4:rem: This entry [NCBI gibbsq 113131] was created by the journal scanning #:A.actino.4:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.4:rem: This sequence comes from Fig. 7. #:A.actino.4:rem:FEATURES Location/Qualifiers #:A.actino.4:rem: rRNA 1..61 #:A.actino.4:rem: /partial #:A.actino.4:rem: /note="Description: 23S ribosomal RNA" #:A.actino.4:rem: source 1..61 #:A.actino.4:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.4:rem:BASE COUNT 22 a 11 c 21 g 6 t 1 others #:A.actino.4:rem:ORIGIN #:A.actino.5:name:Actinobacillus actinomycetemcomitans #:A.actino.5:subsp: #:A.actino.5:strain: #:A.actino.5:atcc: #:A.actino.5:acs:S44636 #:A.actino.5:auth: #:A.actino.5:title: #:A.actino.5:jour: #:A.actino.5:who: #:A.actino.5:date: #:A.actino.5:rem:LOCUS S44636 115 bp rRNA BCT 12-NOV-1992 #:A.actino.5:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.5:rem: actinomycetemcomitans, SUNYaB MIM-AA-1d, serotype b, rRNA Partial, #:A.actino.5:rem: 115 nt] #:A.actino.5:rem:ACCESSION S44636 #:A.actino.5:rem:KEYWORDS . #:A.actino.5:rem:SOURCE Actinobacillus actinomycetemcomitans serotype b SUNYaB MIM-AA-1d #:A.actino.5:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.5:rem: Unclassified. #:A.actino.5:rem:REFERENCE 1 (bases 1 to 115) #:A.actino.5:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.5:rem: Zambon,J.J. #:A.actino.5:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.5:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.5:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.5:rem: STANDARD full automatic #:A.actino.5:rem:COMMENT #:A.actino.5:rem: This entry [NCBI gibbsq 113130] was created by the journal scanning #:A.actino.5:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.5:rem: This sequence comes from Fig. 7. #:A.actino.5:rem:FEATURES Location/Qualifiers #:A.actino.5:rem: rRNA 1..115 #:A.actino.5:rem: /partial #:A.actino.5:rem: /note="Description: 23S ribosomal RNA" #:A.actino.5:rem: source 1..115 #:A.actino.5:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.5:rem:BASE COUNT 31 a 15 c 22 g 19 t 28 others #:A.actino.5:rem:ORIGIN #:A.actino.6:name:Actinobacillus actinomycetemcomitans #:A.actino.6:subsp: #:A.actino.6:strain: #:A.actino.6:atcc: #:A.actino.6:acs:S44633 #:A.actino.6:auth: #:A.actino.6:title: #:A.actino.6:jour: #:A.actino.6:who: #:A.actino.6:date: #:A.actino.6:rem:LOCUS S44633 118 bp rRNA BCT 12-NOV-1992 #:A.actino.6:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.6:rem: actinomycetemcomitans, ATCC 33384T, NCTC 9710, serotype c, rRNA #:A.actino.6:rem: Partial, 118 nt] #:A.actino.6:rem:ACCESSION S44633 #:A.actino.6:rem:KEYWORDS . #:A.actino.6:rem:SOURCE Actinobacillus actinomycetemcomitans NCTC 9710 serotype c ATCC #:A.actino.6:rem: 33384T #:A.actino.6:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.6:rem: Unclassified. #:A.actino.6:rem:REFERENCE 1 (bases 1 to 118) #:A.actino.6:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.6:rem: Zambon,J.J. #:A.actino.6:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.6:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.6:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.6:rem: STANDARD full automatic #:A.actino.6:rem:COMMENT #:A.actino.6:rem: This entry [NCBI gibbsq 113127] was created by the journal scanning #:A.actino.6:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.6:rem: This sequence comes from Fig. 7. #:A.actino.6:rem:FEATURES Location/Qualifiers #:A.actino.6:rem: rRNA 1..118 #:A.actino.6:rem: /partial #:A.actino.6:rem: /note="Description: 23S ribosomal RNA" #:A.actino.6:rem: source 1..118 #:A.actino.6:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.6:rem:BASE COUNT 40 a 21 c 34 g 22 t 1 others #:A.actino.6:rem:ORIGIN #:A.actino.7:name:Actinobacillus actinomycetemcomitans #:A.actino.7:subsp: #:A.actino.7:strain: #:A.actino.7:atcc: #:A.actino.7:acs:S44635 #:A.actino.7:auth: #:A.actino.7:title: #:A.actino.7:jour: #:A.actino.7:who: #:A.actino.7:date: #:A.actino.7:rem:LOCUS S44635 77 bp rRNA BCT 12-NOV-1992 #:A.actino.7:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.7:rem: actinomycetemcomitans, SUNYAB 364, serotype c, rRNA Partial, 77 nt] #:A.actino.7:rem:ACCESSION S44635 #:A.actino.7:rem:KEYWORDS . #:A.actino.7:rem:SOURCE Actinobacillus actinomycetemcomitans SUNYAB 364 serotype c #:A.actino.7:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.7:rem: Unclassified. #:A.actino.7:rem:REFERENCE 1 (bases 1 to 77) #:A.actino.7:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.7:rem: Zambon,J.J. #:A.actino.7:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.7:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.7:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.7:rem: STANDARD full automatic #:A.actino.7:rem:COMMENT #:A.actino.7:rem: This entry [NCBI gibbsq 113129] was created by the journal scanning #:A.actino.7:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.7:rem: This sequence comes from Fig. 7. #:A.actino.7:rem:FEATURES Location/Qualifiers #:A.actino.7:rem: rRNA 1..77 #:A.actino.7:rem: /partial #:A.actino.7:rem: /note="Description: 23S ribosomal RNA" #:A.actino.7:rem: source 1..77 #:A.actino.7:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.7:rem:BASE COUNT 24 a 15 c 22 g 10 t 6 others #:A.actino.7:rem:ORIGIN #:A.actino.8:name:Actinobacillus actinomycetemcomitans #:A.actino.8:subsp: #:A.actino.8:strain: #:A.actino.8:atcc: #:A.actino.8:acs:S44634 #:A.actino.8:auth: #:A.actino.8:title: #:A.actino.8:jour: #:A.actino.8:who: #:A.actino.8:date: #:A.actino.8:rem:LOCUS S44634 94 bp rRNA BCT 12-NOV-1992 #:A.actino.8:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.8:rem: actinomycetemcomitans, SUNYAB 114, serotype c, rRNA Partial, 94 nt] #:A.actino.8:rem:ACCESSION S44634 #:A.actino.8:rem:KEYWORDS . #:A.actino.8:rem:SOURCE Actinobacillus actinomycetemcomitans SUNYAB 114 serotype c #:A.actino.8:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.8:rem: Unclassified. #:A.actino.8:rem:REFERENCE 1 (bases 1 to 94) #:A.actino.8:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.8:rem: Zambon,J.J. #:A.actino.8:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.8:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.8:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.8:rem: STANDARD full automatic #:A.actino.8:rem:COMMENT #:A.actino.8:rem: This entry [NCBI gibbsq 113128] was created by the journal scanning #:A.actino.8:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.8:rem: This sequence comes from Fig. 7. #:A.actino.8:rem:FEATURES Location/Qualifiers #:A.actino.8:rem: rRNA 1..94 #:A.actino.8:rem: /partial #:A.actino.8:rem: /note="Description: 23S ribosomal RNA" #:A.actino.8:rem: source 1..94 #:A.actino.8:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.8:rem:BASE COUNT 32 a 17 c 25 g 16 t 4 others #:A.actino.8:rem:ORIGIN #:A.actino.9:name:Actinobacillus actinomycetemcomitans #:A.actino.9:subsp: #:A.actino.9:strain: #:A.actino.9:atcc: #:A.actino.9:acs:S44632 #:A.actino.9:auth: #:A.actino.9:title: #:A.actino.9:jour: #:A.actino.9:who: #:A.actino.9:date: #:A.actino.9:rem:LOCUS S44632 103 bp rRNA BCT 12-NOV-1992 #:A.actino.9:rem:DEFINITION 23S ribosomal RNA {gap region} [Actinobacillus #:A.actino.9:rem: actinomycetemcomitans, ATCC 43719, SUNYAB 67, serotype c, rRNA #:A.actino.9:rem: Partial, 103 nt] #:A.actino.9:rem:ACCESSION S44632 #:A.actino.9:rem:KEYWORDS . #:A.actino.9:rem:SOURCE Actinobacillus actinomycetemcomitans SUNYAB 67 ATCC 43719 serotype #:A.actino.9:rem: c #:A.actino.9:rem: ORGANISM Actinobacillus actinomycetemcomitans #:A.actino.9:rem: Unclassified. #:A.actino.9:rem:REFERENCE 1 (bases 1 to 103) #:A.actino.9:rem: AUTHORS Haraszthy,V.I., Sunday,G.J., Bobek,L.A., Motley,T.S., Preus,H. and #:A.actino.9:rem: Zambon,J.J. #:A.actino.9:rem: TITLE Identification and analysis of the gap region in the 23S ribosomal #:A.actino.9:rem: RNA from Actinobacillus actinomycetemcomitans #:A.actino.9:rem: JOURNAL J. Dent. Res. 71, 1561-1568 (1992) #:A.actino.9:rem: STANDARD full automatic #:A.actino.9:rem:COMMENT #:A.actino.9:rem: This entry [NCBI gibbsq 113126] was created by the journal scanning #:A.actino.9:rem: component of NCBI/GenBank at the National Library of Medicine. #:A.actino.9:rem: This sequence comes from Fig. 7. #:A.actino.9:rem:FEATURES Location/Qualifiers #:A.actino.9:rem: rRNA 1..103 #:A.actino.9:rem: /partial #:A.actino.9:rem: /note="Description: 23S ribosomal RNA" #:A.actino.9:rem: source 1..103 #:A.actino.9:rem: /organism="Actinobacillus actinomycetemcomitans" #:A.actino.9:rem:BASE COUNT 32 a 20 c 27 g 19 t 5 others #:A.actino.9:rem:ORIGIN #:PURPLE.DEL:name:PROTEOBACTERIA - DELTA SUBDIVISION #:PURPLE.DEL:subsp: #:PURPLE.DEL:strain: #:PURPLE.DEL:atcc: #:PURPLE.DEL:acs:DIVIDER #:PURPLE.DEL:auth: #:PURPLE.DEL:title: #:PURPLE.DEL:jour: #:PURPLE.DEL:who:Robin Gutell,MCDB-256,28595,7868901 #:PURPLE.DEL:date:Fri Dec 17 13:16:34 1993 #:N.exedens:name:Nannocystis exedens. #:N.exedens:subsp: #:N.exedens:strain: #:N.exedens:atcc: #:N.exedens:acs:X87286 #:N.exedens:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:N.exedens:title:proteobacteria #:N.exedens:jour:Unpublished #:N.exedens:who: #:N.exedens:date:03-JUL-1997 #:N.exedens:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:N.exedens:auth:,R., Weizenegger,M. and Schleifer,K.H. #:N.exedens:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:N.exedens:title:Comparative sequence analysis of 23S rRNA from #:N.exedens:rem:ref:1 (bases 1 to 2955) #:N.exedens:rem:ref:2 (bases 1 to 2955) #:N.exedens:rem:auth:Ludwig,W. #:N.exedens:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:N.exedens:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:N.exedens:rem:: FRG #:N.exedens:rem:title:Direct Submission #:N.exedens:rem:ref:3 (bases 1 to 2955) #:N.exedens:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:N.exedens:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:N.exedens:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:N.exedens:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:N.exedens:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:N.exedens:rem:title:Comparative sequence analysis of 23S rRNA from #:N.exedens:rem:: proteobacteria #:N.exedens:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:N.exedens:rem:GenBank ACCESSION:X87286 #:S.aurantia:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:S.aurantia:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:S.aurantia:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:S.aurantia:title:Comparative sequence analysis of 23S rRNA from #:S.aurantia:name:Stigmatella aurantiaca. #:S.aurantia:subsp: #:S.aurantia:strain: #:S.aurantia:atcc: #:S.aurantia:acs:X87291 #:S.aurantia:auth:,R., Weizenegger,M. and Schleifer,K.H. #:S.aurantia:title:proteobacteria #:S.aurantia:jour:Unpublished #:S.aurantia:who: #:S.aurantia:date:03-JUL-1997 #:S.aurantia:rem:ref:1 (bases 1 to 2975) #:S.aurantia:rem:ref:2 (bases 1 to 2975) #:S.aurantia:rem:auth:Ludwig,W. #:S.aurantia:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:S.aurantia:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:S.aurantia:rem:: FRG #:S.aurantia:rem:title:Direct Submission #:S.aurantia:rem:ref:3 (bases 1 to 2975) #:S.aurantia:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:S.aurantia:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:S.aurantia:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:S.aurantia:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:S.aurantia:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:S.aurantia:rem:title:Comparative sequence analysis of 23S rRNA from #:S.aurantia:rem:: proteobacteria #:S.aurantia:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:S.aurantia:rem:GenBank ACCESSION:X87291 #:H.pylori.1:name:Helicobacter pylori #:H.pylori.1:subsp: #:H.pylori.1:strain: #:H.pylori.1:atcc: #:H.pylori.1:acs:U27270 #:H.pylori.1:auth:Hiratsuka,K. #:H.pylori.1:title: #:H.pylori.1:jour: #:H.pylori.1:who: #:H.pylori.1:date: #:H.pylori.1:rem:LOCUS HPU27270 3857 bp DNA BCT 28-JUN-1995 #:H.pylori.1:rem:DEFINITION Helicobacter pylori 23S and 5S ribosomal RNA genes, complete #:H.pylori.1:rem: sequence. #:H.pylori.1:rem:ACCESSION U27270 #:H.pylori.1:rem:KEYWORDS . #:H.pylori.1:rem:SOURCE Helicobacter pylori. #:H.pylori.1:rem: ORGANISM Helicobacter pylori #:H.pylori.1:rem: Eubacteria; Proteobacteria; epsilon subdivision; Helicobacter. #:H.pylori.1:rem:REFERENCE 1 (bases 1 to 3857) #:H.pylori.1:rem: AUTHORS Hiratsuka,K. #:H.pylori.1:rem: TITLE Genetic aspects of Helicobacter pylori and Campylobacter jejuni #:H.pylori.1:rem: JOURNAL Unpublished (1995) #:H.pylori.1:rem:REFERENCE 2 (bases 1 to 3857) #:H.pylori.1:rem: AUTHORS Hiratsuka,K. #:H.pylori.1:rem: TITLE Direct Submission #:H.pylori.1:rem: JOURNAL Submitted (17-MAY-1995) Koji Hiratsuka, Medical Microbiology and #:H.pylori.1:rem: Immunology, University of Alberta, Edmonton, Alberta T6G 2H7, #:H.pylori.1:rem: Canada #:H.pylori.1:rem:COMMENT #:H.pylori.1:rem: NCBI gi: 881379 #:H.pylori.1:rem:FEATURES Location/Qualifiers #:H.pylori.1:rem: source 1..3857 #:H.pylori.1:rem: /organism="Helicobacter pylori" #:H.pylori.1:rem: /strain="UA802" #:H.pylori.1:rem: rRNA 372..3339 #:H.pylori.1:rem: /product="23S ribosomal RNA" #:H.pylori.1:rem: rRNA 3568..3702 #:H.pylori.1:rem: /product="5S ribosomal RNA" #:H.pylori.1:rem:BASE COUNT 1128 a 735 c 1002 g 992 t #:H.pylori.1:rem:ORIGIN #:H.pylori.2:name:Helicobacter pylori. #:H.pylori.2:subsp: #:H.pylori.2:strain: #:H.pylori.2:atcc: #:H.pylori.2:acs:AE000558 #:H.pylori.2:auth:Gocayne, Utterback, Peterson, Kelley, Cotton, Weidman, Fujii, #:H.pylori.2:title:The complete genome sequence of the gastric pathogen #:H.pylori.2:jour:Nature 388, 539-547 (1997) #:H.pylori.2:who: #:H.pylori.2:date:06-AUG-1997 #:H.pylori.2:auth:Bowman, Watthey, Wallin, Hayes, Borodovsky, Karp, Smith, #:H.pylori.2:auth:Fraser and Venter. #:H.pylori.2:auth:Tomb, White, Kerlavage, Clayton, Sutton, Fleischmann, #:H.pylori.2:auth:Ketchum, Klenk, Gill, Dougherty, Nelson, Quackenbush, Zhou, #:H.pylori.2:auth:Kirkness, Peterson, Loftus, Richardson, Dodson, Khalak, #:H.pylori.2:auth:Glodek, McKenney, Fitzegerald, Lee, Adams, Hickey, Berg, #:H.pylori.2:title:Helicobacter pylori #:H.pylori.2:rem:ref:1 (bases 1 to 10210) #:H.pylori.2:rem:ref:2 (bases 1 to 10210) #:H.pylori.2:rem:auth:Tomb, White, Kerlavage, Clayton, Sutton, Fleischmann, #:H.pylori.2:rem:: Ketchum, Klenk, Gill, Dougherty, Nelson, Quackenbush, #:H.pylori.2:rem:: Zhou, Kirkness, Peterson, Loftus, Richardson, Dodson, #:H.pylori.2:rem:: Khalak, Glodek, McKenney, Fitzegerald, Lee, Adams, Hickey, #:H.pylori.2:rem:: Berg, Gocayne, Utterback, Peterson, Kelley, Cotton, #:H.pylori.2:rem:: Weidman, Fujii, Bowman, Watthey, Wallin, Hayes, #:H.pylori.2:rem:: Borodovsky, Karp, Smith, Fraser and Venter. #:H.pylori.2:rem:jour:Submitted (06-AUG-1997) The Institute for Genomic #:H.pylori.2:rem:: Research, 9712 Medical Center Dr, Rockville, MD 20850, USA #:H.pylori.2:rem:title:Direct Submission #:H.pylori.2:rem:KEYWORDS:. #:H.pylori.2:rem:GenBank ACCESSION:AE0005 8 AE00 511 #:H.pylori.2:rem:Address all correspondence to: #:H.pylori.2:rem:hpdb@tigr.org #:H.pylori.2:rem:or #:H.pylori.2:rem:J. Craig Venter #:H.pylori.2:rem:The Institute for Genomic Research #:H.pylori.2:rem:9712 Medical Center Dr. #:H.pylori.2:rem:Rockville, MD, 20850 #:H.pylori.2:rem:Douglas E. Berg is with the Washington University St. Louis #:H.pylori.2:rem:School of Medicine, St. Louis, MO 63110. #:H.pylori.2:rem:Eric Wallin is with Stockholm University Department of #:H.pylori.2:rem:Biochemistry, Stockholm, Sweden #:H.pylori.2:rem:Hamilton O. Smith is with the Johns Hopkins University School #:H.pylori.2:rem:of #:H.pylori.2:rem:Medicine, Baltimore, MD, 21205. #:H.pylori.2:rem:Mark Borodovsky and William S. Hayes #:H.pylori.2:rem:are with the School of Biology, Georgia Tech, #:H.pylori.2:rem:Atlanta, GA, 30332. #:H.pylori.2:rem:Peter D. Karp is with SRI International, #:H.pylori.2:rem:Artificial Intelligence Center, Menlo Park, CA, 94025. #:H.pylori.2:rem:All other authors are with The Institute for Genomic Research, #:H.pylori.2:rem:9712 #:H.pylori.2:rem:Medical Center Dr., Rockville, MD, 20850. #:H.pylori.2:rem:Coding potential analysis was performed using GeneMark #:H.pylori.2:rem:software, #:H.pylori.2:rem:kindly supplied by Mark Borodovsky, Georgia Institute of #:H.pylori.2:rem:Technology, Atlanta, GA, 30332. #:H.pylori.2:rem:e-mail: mark@amber.gatech.edu #:H.pylori.2:rem:Submission and annotation: Owen White #:H.pylori.2:rem:e-mail: owhite@tigr.org #:H.pylori.2:rem:Biological role information, putative identifications, #:H.pylori.2:rem:sequence #:H.pylori.2:rem:alignments, on-line name and sequence search capability are #:H.pylori.2:rem:available at TIGR's World Wide Web site. #:H.pylori.2:rem:(URL: http://www.tigr.org/tdb/mdb/hpdb/hpdb.html). #:H.pylori.3:name:Helicobacter pylori. #:H.pylori.3:subsp: #:H.pylori.3:strain: #:H.pylori.3:atcc: #:H.pylori.3:acs:AE000641 #:H.pylori.3:auth:Glodek, McKenney, Fitzegerald, Lee, Adams, Hickey, Berg, #:H.pylori.3:title:Helicobacter pylori #:H.pylori.3:jour:Nature 388, 539-547 (1997) #:H.pylori.3:who: #:H.pylori.3:date:06-AUG-1997 #:H.pylori.3:auth:Gocayne, Utterback, Peterson, Kelley, Cotton, Weidman, Fujii, #:H.pylori.3:auth:Bowman, Watthey, Wallin, Hayes, Borodovsky, Karp, Smith, #:H.pylori.3:auth:Fraser and Venter. #:H.pylori.3:auth:Tomb, White, Kerlavage, Clayton, Sutton, Fleischmann, #:H.pylori.3:auth:Ketchum, Klenk, Gill, Dougherty, Nelson, Quackenbush, Zhou, #:H.pylori.3:auth:Kirkness, Peterson, Loftus, Richardson, Dodson, Khalak, #:H.pylori.3:title:The complete genome sequence of the gastric pathogen #:H.pylori.3:rem:ref:1 (bases 1 to 10823) #:H.pylori.3:rem:ref:2 (bases 1 to 10823) #:H.pylori.3:rem:auth:Tomb, White, Kerlavage, Clayton, Sutton, Fleischmann, #:H.pylori.3:rem:: Ketchum, Klenk, Gill, Dougherty, Nelson, Quackenbush, #:H.pylori.3:rem:: Zhou, Kirkness, Peterson, Loftus, Richardson, Dodson, #:H.pylori.3:rem:: Khalak, Glodek, McKenney, Fitzegerald, Lee, Adams, Hickey, #:H.pylori.3:rem:: Berg, Gocayne, Utterback, Peterson, Kelley, Cotton, #:H.pylori.3:rem:: Weidman, Fujii, Bowman, Watthey, Wallin, Hayes, #:H.pylori.3:rem:: Borodovsky, Karp, Smith, Fraser and Venter. #:H.pylori.3:rem:jour:Submitted (06-AUG-1997) The Institute for Genomic #:H.pylori.3:rem:: Research, 9712 Medical Center Dr, Rockville, MD 20850, USA #:H.pylori.3:rem:title:Direct Submission #:H.pylori.3:rem:KEYWORDS:. #:H.pylori.3:rem:GenBank ACCESSION:AE0006 1 AE00 511 #:H.pylori.3:rem:Address all correspondence to: #:H.pylori.3:rem:hpdb@tigr.org #:H.pylori.3:rem:or #:H.pylori.3:rem:J. Craig Venter #:H.pylori.3:rem:The Institute for Genomic Research #:H.pylori.3:rem:9712 Medical Center Dr. #:H.pylori.3:rem:Rockville, MD, 20850 #:H.pylori.3:rem:Douglas E. Berg is with the Washington University St. Louis #:H.pylori.3:rem:School of Medicine, St. Louis, MO 63110. #:H.pylori.3:rem:Eric Wallin is with Stockholm University Department of #:H.pylori.3:rem:Biochemistry, Stockholm, Sweden #:H.pylori.3:rem:Hamilton O. Smith is with the Johns Hopkins University School #:H.pylori.3:rem:of #:H.pylori.3:rem:Medicine, Baltimore, MD, 21205. #:H.pylori.3:rem:Mark Borodovsky and William S. Hayes #:H.pylori.3:rem:are with the School of Biology, Georgia Tech, #:H.pylori.3:rem:Atlanta, GA, 30332. #:H.pylori.3:rem:Peter D. Karp is with SRI International, #:H.pylori.3:rem:Artificial Intelligence Center, Menlo Park, CA, 94025. #:H.pylori.3:rem:All other authors are with The Institute for Genomic Research, #:H.pylori.3:rem:9712 #:H.pylori.3:rem:Medical Center Dr., Rockville, MD, 20850. #:H.pylori.3:rem:Coding potential analysis was performed using GeneMark #:H.pylori.3:rem:software, #:H.pylori.3:rem:kindly supplied by Mark Borodovsky, Georgia Institute of #:H.pylori.3:rem:Technology, Atlanta, GA, 30332. #:H.pylori.3:rem:e-mail: mark@amber.gatech.edu #:H.pylori.3:rem:Submission and annotation: Owen White #:H.pylori.3:rem:e-mail: owhite@tigr.org #:H.pylori.3:rem:Biological role information, putative identifications, #:H.pylori.3:rem:sequence #:H.pylori.3:rem:alignments, on-line name and sequence search capability are #:H.pylori.3:rem:available at TIGR's World Wide Web site. #:H.pylori.3:rem:(URL: http://www.tigr.org/tdb/mdb/hpdb/hpdb.html). #:PURPLE.EPS:name: #:PURPLE.EPS:subsp: #:PURPLE.EPS:strain: #:PURPLE.EPS:atcc: #:PURPLE.EPS:acs:DIVIDER #:PURPLE.EPS:auth: #:PURPLE.EPS:title: #:PURPLE.EPS:jour: #:PURPLE.EPS:who:Robin Gutell,MCDB-256,28595,7868901 #:PURPLE.EPS:date:Fri Dec 17 13:17:28 1993 #:W.succinog:auth:Bachleitner,M., Klugbauer,N., Springer,N., Lane,D., Nietupsky #:W.succinog:auth:,R., Weizenegger,M. and Schleifer,K.H. #:W.succinog:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., Spring,S #:W.succinog:title:Comparative sequence analysis of 23S rRNA from #:W.succinog:name:Wolinella succinogenes. #:W.succinog:subsp: #:W.succinog:strain: #:W.succinog:atcc: #:W.succinog:acs:X87295 #:W.succinog:auth:., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G., Dorn,S., #:W.succinog:title:proteobacteria #:W.succinog:jour:Unpublished #:W.succinog:who: #:W.succinog:date:03-JUL-1997 #:W.succinog:rem:ref:1 (bases 1 to 2899) #:W.succinog:rem:ref:2 (bases 1 to 2899) #:W.succinog:rem:auth:Ludwig,W. #:W.succinog:rem:jour:Submitted (18-MAY-1995) W. Ludwig, Lehrstuhl fuer #:W.succinog:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:W.succinog:rem:: FRG #:W.succinog:rem:title:Direct Submission #:W.succinog:rem:ref:3 (bases 1 to 2899) #:W.succinog:rem:auth:Ludwig,W., Rossello-Mora,R., Aznar,R., Klugbauer,S., #:W.succinog:rem:: Spring,S., Reetz,K., Beimfohr,C., Brockmann,E., Kirchhof,G. #:W.succinog:rem:: , Dorn,S., Bachleitner,M., Klugbauer,N., Springer,N., Lane, #:W.succinog:rem:: D., Nietupsky,R., Weizenegger,M. and Schleifer,K.H. #:W.succinog:rem:jour:Syst. Appl. Microbiol. 18, 164-188 (1995) #:W.succinog:rem:title:Comparative sequence analysis of 23S rRNA from #:W.succinog:rem:: proteobacteria #:W.succinog:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:W.succinog:rem:GenBank ACCESSION:X87295 #:A.cryaerop:name:Arcobacter cryaerophilus #:A.cryaerop:subsp: #:A.cryaerop:strain: #:A.cryaerop:atcc: #:A.cryaerop:acs:X80383 #:A.cryaerop:auth: #:A.cryaerop:title: #:A.cryaerop:jour: #:A.cryaerop:who: #:A.cryaerop:date: #:A.cryaerop:rem:LOCUS AC23SRNA 799 bp DNA BCT 22-MAR-1995 #:A.cryaerop:rem:DEFINITION A.cryaerophilus gene for 23S ribosomal RNA (partial). #:A.cryaerop:rem:ACCESSION X80383 #:A.cryaerop:rem:KEYWORDS 23S ribosomal RNA. #:A.cryaerop:rem:SOURCE Arcobacter cryaerophilus. #:A.cryaerop:rem: ORGANISM Arcobacter cryaerophilus #:A.cryaerop:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:A.cryaerop:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:A.cryaerop:rem:REFERENCE 1 (bases 1 to 799) #:A.cryaerop:rem: AUTHORS Bastyns,K., Chapelli,S., Vandamme,P., Goossens,H. and De #:A.cryaerop:rem: Wacheter,R. #:A.cryaerop:rem: TITLE Species-specific detection of campylobacters important in #:A.cryaerop:rem: veterinary medicine by PCR amplification of 23S rDNA areas #:A.cryaerop:rem: JOURNAL Syst. Appl. Microbiol. 17, 563-568 (1994) #:A.cryaerop:rem:REFERENCE 2 (bases 1 to 799) #:A.cryaerop:rem: AUTHORS Bastyns,K. #:A.cryaerop:rem: TITLE Direct Submission #:A.cryaerop:rem: JOURNAL Submitted (18-JUL-1994) to the EMBL/GenBank/DDBJ databases. K. #:A.cryaerop:rem: Bastyns, University of Antwerpen (UIA), Dept Biochemie, Building T, #:A.cryaerop:rem: 2610 Wilrijk, BELGIUM #:A.cryaerop:rem:COMMENT #:A.cryaerop:rem: NCBI gi: 735911 #:A.cryaerop:rem:FEATURES Location/Qualifiers #:A.cryaerop:rem: source 1..799 #:A.cryaerop:rem: /organism="Arcobacter cryaerophilus" #:A.cryaerop:rem: /strain="LMG 7536T" #:A.cryaerop:rem: rRNA <1..>799 #:A.cryaerop:rem: /note="Positions 1 and 799 of the partial 23S rDNA #:A.cryaerop:rem: fragment correspond to position 1107 and 1909 in the #:A.cryaerop:rem: Escherichia coli 23S rDNA" #:A.cryaerop:rem: /product="23S ribosomal RNA" #:A.cryaerop:rem:BASE COUNT 236 a 153 c 218 g 192 t #:A.cryaerop:rem:ORIGIN #:A.skirrowi:name:Arcobacter skirrowi #:A.skirrowi:subsp: #:A.skirrowi:strain: #:A.skirrowi:atcc: #:A.skirrowi:acs:X80385 #:A.skirrowi:auth: #:A.skirrowi:title: #:A.skirrowi:jour: #:A.skirrowi:who: #:A.skirrowi:date: #:A.skirrowi:rem:LOCUS AS23SRN 826 bp DNA BCT 22-MAR-1995 #:A.skirrowi:rem:DEFINITION A.skirrowi gene for 23S ribosomal RNA (partial). #:A.skirrowi:rem:ACCESSION X80385 #:A.skirrowi:rem:KEYWORDS 23S ribosomal RNA. #:A.skirrowi:rem:SOURCE Arcobacter skirrowi. #:A.skirrowi:rem: ORGANISM Arcobacter skirrowi #:A.skirrowi:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:A.skirrowi:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:A.skirrowi:rem:REFERENCE 1 (bases 1 to 826) #:A.skirrowi:rem: AUTHORS Bastyns,K., Chapelli,S., Vandamme,P., Goossens,H. and De #:A.skirrowi:rem: Wacheter,R. #:A.skirrowi:rem: TITLE Species-specific detection of campylobacters important in #:A.skirrowi:rem: veterinary medicine by PCR amplification of 23S rDNA areas #:A.skirrowi:rem: JOURNAL Syst. Appl. Microbiol. 17, 563-568 (1994) #:A.skirrowi:rem:REFERENCE 2 (bases 1 to 826) #:A.skirrowi:rem: AUTHORS Bastyns,K. #:A.skirrowi:rem: TITLE Direct Submission #:A.skirrowi:rem: JOURNAL Submitted (18-JUL-1994) to the EMBL/GenBank/DDBJ databases. K. #:A.skirrowi:rem: Bastyns, University of Antwerpen (UIA), Dept Biochemie, Building T, #:A.skirrowi:rem: 2610 Wilrijk, BELGIUM #:A.skirrowi:rem:COMMENT #:A.skirrowi:rem: NCBI gi: 735916 #:A.skirrowi:rem:FEATURES Location/Qualifiers #:A.skirrowi:rem: source 1..826 #:A.skirrowi:rem: /organism="Arcobacter skirrowi" #:A.skirrowi:rem: /strain="LMG 6621T" #:A.skirrowi:rem: rRNA <1..>826 #:A.skirrowi:rem: /note="Positions 1 and 826 of the partial 23S rDNA #:A.skirrowi:rem: fragment correspond to position 1082 and 1910 in the #:A.skirrowi:rem: Escherichia coli 23S rDNA gene" #:A.skirrowi:rem: /product="23S ribosomal RNA" #:A.skirrowi:rem:BASE COUNT 241 a 156 c 226 g 203 t #:A.skirrowi:rem:ORIGIN #:A.butzleri:name:Arcobacter butzleri #:A.butzleri:subsp: #:A.butzleri:strain: #:A.butzleri:atcc: #:A.butzleri:acs:X80382 #:A.butzleri:auth: #:A.butzleri:title: #:A.butzleri:jour: #:A.butzleri:who: #:A.butzleri:date: #:A.butzleri:rem:LOCUS AB23SRN 832 bp DNA BCT 22-MAR-1995 #:A.butzleri:rem:DEFINITION A.butzlerii gene for 23S ribosomal RNA (partial). #:A.butzleri:rem:ACCESSION X80382 #:A.butzleri:rem:KEYWORDS 23S ribosomal RNA. #:A.butzleri:rem:SOURCE Arcobacter butzleri. #:A.butzleri:rem: ORGANISM Arcobacter butzleri #:A.butzleri:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:A.butzleri:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:A.butzleri:rem:REFERENCE 1 (bases 1 to 832) #:A.butzleri:rem: AUTHORS Bastyns,K., Chapelli,S., Vandamme,P., Goossens,H. and De #:A.butzleri:rem: Wacheter,R. #:A.butzleri:rem: TITLE Species-specific detection of campylobacters important in #:A.butzleri:rem: veterinary medicine by PCR amplification of 23S rDNA areas #:A.butzleri:rem: JOURNAL Syst. Appl. Microbiol. 17, 563-568 (1994) #:A.butzleri:rem:REFERENCE 2 (bases 1 to 832) #:A.butzleri:rem: AUTHORS Bastyns,K. #:A.butzleri:rem: TITLE Direct Submission #:A.butzleri:rem: JOURNAL Submitted (18-JUL-1994) to the EMBL/GenBank/DDBJ databases. K. #:A.butzleri:rem: Bastyns, University of Antwerpen (UIA), Dept Biochemie, Building T, #:A.butzleri:rem: 2610 Wilrijk, BELGIUM #:A.butzleri:rem:COMMENT #:A.butzleri:rem: NCBI gi: 735910 #:A.butzleri:rem:FEATURES Location/Qualifiers #:A.butzleri:rem: source 1..832 #:A.butzleri:rem: /organism="Arcobacter butzlerii" #:A.butzleri:rem: /strain="LMG 10828T" #:A.butzleri:rem: rRNA <1..>832 #:A.butzleri:rem: /note="Positions 1 and 832 of the partial 23S rDNA #:A.butzleri:rem: fragment correspond to position 1076 and 1909 in the #:A.butzleri:rem: Escherichia coli 23S rDNA gene" #:A.butzleri:rem: /product="23S ribosomal RNA" #:A.butzleri:rem:BASE COUNT 244 a 161 c 228 g 198 t 1 others #:A.butzleri:rem:ORIGIN #:A.nitrofig:name:Arcobacter nitrofigilis #:A.nitrofig:subsp: #:A.nitrofig:strain: #:A.nitrofig:atcc: #:A.nitrofig:acs:X80384 #:A.nitrofig:auth: #:A.nitrofig:title: #:A.nitrofig:jour: #:A.nitrofig:who: #:A.nitrofig:date: #:A.nitrofig:rem:LOCUS AN23SRNA 785 bp DNA BCT 22-MAR-1995 #:A.nitrofig:rem:DEFINITION A.nitrofigilis gene for 23S ribosomal RNA (partial). #:A.nitrofig:rem:ACCESSION X80384 #:A.nitrofig:rem:KEYWORDS 23S ribosomal RNA. #:A.nitrofig:rem:SOURCE Arcobacter nitrofigilis. #:A.nitrofig:rem: ORGANISM Arcobacter nitrofigilis #:A.nitrofig:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:A.nitrofig:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:A.nitrofig:rem:REFERENCE 1 (bases 1 to 785) #:A.nitrofig:rem: AUTHORS Bastyns,K., Chapelli,S., Vandamme,P., Goossens,H. and De #:A.nitrofig:rem: Wacheter,R. #:A.nitrofig:rem: TITLE Species-specific detection of campylobacters important in #:A.nitrofig:rem: veterinary medicine by PCR amplification of 23S rDNA areas #:A.nitrofig:rem: JOURNAL Syst. Appl. Microbiol. 17, 563-568 (1994) #:A.nitrofig:rem:REFERENCE 2 (bases 1 to 785) #:A.nitrofig:rem: AUTHORS Bastyns,K. #:A.nitrofig:rem: TITLE Direct Submission #:A.nitrofig:rem: JOURNAL Submitted (18-JUL-1994) to the EMBL/GenBank/DDBJ databases. K. #:A.nitrofig:rem: Bastyns, University of Antwerpen (UIA), Dept Biochemie, Building T, #:A.nitrofig:rem: 2610 Wilrijk, BELGIUM #:A.nitrofig:rem:COMMENT #:A.nitrofig:rem: NCBI gi: 735915 #:A.nitrofig:rem:FEATURES Location/Qualifiers #:A.nitrofig:rem: source 1..785 #:A.nitrofig:rem: /organism="Arcobacter nitrofigilis" #:A.nitrofig:rem: /strain="LMG7604T" #:A.nitrofig:rem: rRNA <1..>785 #:A.nitrofig:rem: /note="Positions 1 and 785 of the partial 23S rDNA #:A.nitrofig:rem: fragment correspond to position 1131 and 1916 in the #:A.nitrofig:rem: Escherichia coli 23S rDNA gene" #:A.nitrofig:rem: /product="23S ribosomal RNA" #:A.nitrofig:rem:BASE COUNT 227 a 157 c 213 g 188 t #:A.nitrofig:rem:ORIGIN #:Cam.sp.:name:Campylobacter sp. #:Cam.sp.:subsp: #:Cam.sp.:strain: #:Cam.sp.:atcc: #:Cam.sp.:acs:Y11766 #:Cam.sp.:auth:Linton,D., Hurtado,A., Clewley,J.P., Chart,H., Owen,R.J. and #:Cam.sp.:title:A Campylobacter group from fresh water with enlarged #:Cam.sp.:jour:Unpublished #:Cam.sp.:who: #:Cam.sp.:date:12-MAR-1997 #:Cam.sp.:auth:Stanley,J. #:Cam.sp.:title:flagellin genes #:Cam.sp.:rem:ref:1 (bases 1 to 2661) #:Cam.sp.:rem:ref:2 (bases 1 to 2661) #:Cam.sp.:rem:auth:Stanley,J. #:Cam.sp.:rem:jour:Submitted (11-MAR-1997) J. Stanley, Central Public Health #:Cam.sp.:rem:: Laboratory, Virus Reference Division, 61 Colindale Avenue, #:Cam.sp.:rem:: NW9 5HT, UK #:Cam.sp.:rem:title:Direct Submission #:Cam.sp.:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:Cam.sp.:rem:GenBank ACCESSION:Y11766 #:Cam.hyoile:auth:Linton,D., Hurtado,A., Clewley,J.P., Chart,H., Owen,R.J. and #:Cam.hyoile:title:A Campylobacter group from fresh water with enlarged #:Cam.hyoile:name:Campylobacter hyoilei. #:Cam.hyoile:subsp: #:Cam.hyoile:strain: #:Cam.hyoile:atcc: #:Cam.hyoile:acs:Y11765 #:Cam.hyoile:auth:Stanley,J. #:Cam.hyoile:title:flagellin genes #:Cam.hyoile:jour:Unpublished #:Cam.hyoile:who: #:Cam.hyoile:date:12-MAR-1997 #:Cam.hyoile:rem:ref:1 (bases 1 to 2809) #:Cam.hyoile:rem:ref:2 (bases 1 to 2809) #:Cam.hyoile:rem:auth:Stanley,J. #:Cam.hyoile:rem:jour:Submitted (11-MAR-1997) J. Stanley, Central Public Health #:Cam.hyoile:rem:: Laboratory, Virus Reference Division, 61 Colindale Avenue, #:Cam.hyoile:rem:: NW9 5HT, UK #:Cam.hyoile:rem:title:Direct Submission #:Cam.hyoile:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:Cam.hyoile:rem:GenBank ACCESSION:Y11765 #:C.jejuni.1:name:Campylobacter jejuni #:C.jejuni.1:subsp: #:C.jejuni.1:strain: #:C.jejuni.1:atcc: #:C.jejuni.1:acs:X66616 #:C.jejuni.1:auth: #:C.jejuni.1:title: #:C.jejuni.1:jour: #:C.jejuni.1:who: #:C.jejuni.1:date: #:C.jejuni.1:rem:ID CJ23SR standard; DNA; PRO; 938 BP. #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:AC X66616; #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:DT 22-MAR-1994 (Rel. 39, Created) #:C.jejuni.1:rem:DT 22-MAR-1994 (Rel. 39, Last updated, Version 2) #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:DE C.jejuni 23S rRNA #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:KW 23S ribosomal RNA; ribosomal RNA. #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:OS Campylobacter jejuni #:C.jejuni.1:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.jejuni.1:rem:OC Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:RN [1] #:C.jejuni.1:rem:RP 1-938 #:C.jejuni.1:rem:RA Van Camp G.; #:C.jejuni.1:rem:RT ; #:C.jejuni.1:rem:RL Submitted (04-JUN-1992) to the EMBL/GenBank/DDBJ databases. #:C.jejuni.1:rem:RL G. Van Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.jejuni.1:rem:RL Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:RN [2] #:C.jejuni.1:rem:RP 1-938 #:C.jejuni.1:rem:RA Van Camp G., Chapelle S., De Wachter R.; #:C.jejuni.1:rem:RT "Amplification and sequencing of variable regions in bacterial 23S #:C.jejuni.1:rem:RT ribosomal RNA genes with conserved primer sequences"; #:C.jejuni.1:rem:RL Curr. Microbiol. 27:147-151(1993). #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:FH Key Location/Qualifiers #:C.jejuni.1:rem:FH #:C.jejuni.1:rem:FT source 1..938 #:C.jejuni.1:rem:FT /organism="Campylobacter jejuni" #:C.jejuni.1:rem:FT /strain="ATCC33250" #:C.jejuni.1:rem:FT rRNA 1..938 #:C.jejuni.1:rem:FT /partial #:C.jejuni.1:rem:FT /gene="23S rRNA" #:C.jejuni.1:rem:XX #:C.jejuni.1:rem:SQ Sequence 938 BP; 285 A; 159 C; 244 G; 246 T; 4 other; #:C.jejuni.2:name:Campylobacter jejuni ssp.jejuni #:C.jejuni.2:subsp: #:C.jejuni.2:strain: #:C.jejuni.2:atcc: #:C.jejuni.2:acs:X67765 #:C.jejuni.2:auth: #:C.jejuni.2:title: #:C.jejuni.2:jour: #:C.jejuni.2:who: #:C.jejuni.2:date: #:C.jejuni.2:rem:LOCUS CJJ23S 807 bp DNA BCT 13-DEC-1993 #:C.jejuni.2:rem:DEFINITION C.jejuni ssp.jejuni (LMG 6629) 23S rRNA gene #:C.jejuni.2:rem:ACCESSION X67765 #:C.jejuni.2:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.jejuni.2:rem:SOURCE Campylobacter jejuni #:C.jejuni.2:rem: ORGANISM Campylobacter jejuni #:C.jejuni.2:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.jejuni.2:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.jejuni.2:rem:REFERENCE 1 (bases 1 to 807) #:C.jejuni.2:rem: AUTHORS Van Camp,G. #:C.jejuni.2:rem: TITLE Direct Submission #:C.jejuni.2:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.jejuni.2:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.jejuni.2:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.jejuni.2:rem: STANDARD full automatic #:C.jejuni.2:rem:REFERENCE 2 (bases 1 to 807) #:C.jejuni.2:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.jejuni.2:rem: Wachter,R. #:C.jejuni.2:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.jejuni.2:rem: ribosomal RNA genes of Campylobacter #:C.jejuni.2:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.jejuni.2:rem: STANDARD full automatic #:C.jejuni.2:rem:FEATURES Location/Qualifiers #:C.jejuni.2:rem: source 1..807 #:C.jejuni.2:rem: /organism="Campylobacter jejuni" #:C.jejuni.2:rem: /strain="LMG 6629" #:C.jejuni.2:rem: /sub_strain="jejuni" #:C.jejuni.2:rem: rRNA <1..>807 #:C.jejuni.2:rem: /product="23S ribosomal RNA" #:C.jejuni.2:rem:BASE COUNT 237 a 147 c 216 g 199 t 8 others #:C.jejuni.2:rem:ORIGIN #:C.jejuni.3:name:Campylobacter jejuni #:C.jejuni.3:subsp: #:C.jejuni.3:strain: #:C.jejuni.3:atcc: #:C.jejuni.3:acs:Z29326 #:C.jejuni.3:auth: #:C.jejuni.3:title:3' end is noted wrong in GB entry. #:C.jejuni.3:jour:12 more nucs. added at this end. #:C.jejuni.3:who: #:C.jejuni.3:date: #:C.jejuni.3:rem:From vlchan@utcc.utoronto.ca Tue Aug 3 15:42:28 1993 #:C.jejuni.3:rem:Received: from boulder.Colorado.EDU by savant.colorado.edu with SMTP id AA01161 #:C.jejuni.3:rem: (5.65c/IDA-1.4.4 for ); Tue, 3 Aug 1993 15:42:27 -0600 #:C.jejuni.3:rem:Received: from gpu.utcc.utoronto.ca by boulder.Colorado.EDU with SMTP id AA13542 #:C.jejuni.3:rem: (5.65c/IDA-1.4.4 for ); Tue, 3 Aug 1993 15:42:03 -0600 #:C.jejuni.3:rem:Received: by gpu.utcc.utoronto.ca id <18698>; Tue, 3 Aug 1993 17:41:49 -0400 #:C.jejuni.3:rem:From: "V.L Chan" #:C.jejuni.3:rem:To: rgutell@boulder.colorado.edu #:C.jejuni.3:rem:Subject: corrected 23s rRNA seq #:C.jejuni.3:rem:Message-Id: <93Aug3.174149edt.18698@gpu.utcc.utoronto.ca> #:C.jejuni.3:rem:Date: Tue, 3 Aug 1993 17:41:37 -0400 #:C.jejuni.3:rem:Status: RO #:C.jejuni.3:rem:LOCUS CJ16SRNA 5996 bp DNA BCT 04-MAR-1996 #:C.jejuni.3:rem:DEFINITION C.jejuni TGH9011(ATCC43431) gene for ribosomal RNA operon. #:C.jejuni.3:rem:ACCESSION Z29326 #:C.jejuni.3:rem:NID g440400 #:C.jejuni.3:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; #:C.jejuni.3:rem: transfer RNA-Ala; transfer RNA-Ile. #:C.jejuni.3:rem:SOURCE Campylobacter jejuni. #:C.jejuni.3:rem: ORGANISM Campylobacter jejuni #:C.jejuni.3:rem: Eubacteria; Proteobacteria; epsilon subdivision; Campylobacter. #:C.jejuni.3:rem:REFERENCE 1 (bases 1 to 5996) #:C.jejuni.3:rem: AUTHORS Kim,N.W., Gutell,R.R. and Chan,V.L. #:C.jejuni.3:rem: TITLE Complete sequences and organization of the rrnA operon from #:C.jejuni.3:rem: campylobacter jejuni TGH9011 (ATCC43431) #:C.jejuni.3:rem: JOURNAL Gene 164 (1), 101-106 (1995) #:C.jejuni.3:rem: MEDLINE 96060846 #:C.jejuni.3:rem:REFERENCE 2 (bases 1 to 5996) #:C.jejuni.3:rem: AUTHORS Chan,V.V. #:C.jejuni.3:rem: TITLE Direct Submission #:C.jejuni.3:rem: JOURNAL Submitted (05-JAN-1994) Chan V. V., University of Toronto, #:C.jejuni.3:rem: Microbiology, 150 College Street, Toronto, Ontario, Canada, M5S 1A8 #:C.jejuni.3:rem:FEATURES Location/Qualifiers #:C.jejuni.3:rem: source 1..5996 #:C.jejuni.3:rem: /organism="Campylobacter jejuni" #:C.jejuni.3:rem: /strain="TGH9011(ATCC43431)" #:C.jejuni.3:rem: /chromosome="genomic segment" #:C.jejuni.3:rem: /germline #:C.jejuni.3:rem: -35_signal 77..82 #:C.jejuni.3:rem: /citation=[1] #:C.jejuni.3:rem: /label=-35seq16S #:C.jejuni.3:rem: -10_signal 98..103 #:C.jejuni.3:rem: /citation=[1] #:C.jejuni.3:rem: /label=-10seq16S #:C.jejuni.3:rem: rRNA 264..1776 #:C.jejuni.3:rem: /evidence=experimental #:C.jejuni.3:rem: /gene="rrs" #:C.jejuni.3:rem: /citation=[1] #:C.jejuni.3:rem: /product="16S ribosomal RNA" #:C.jejuni.3:rem: tRNA 1881..1956 #:C.jejuni.3:rem: /evidence=experimental #:C.jejuni.3:rem: /standard_name="alanine tRNA" #:C.jejuni.3:rem: /citation=[1] #:C.jejuni.3:rem: /anticodon=(pos:1914..1916,aa:Ala) #:C.jejuni.3:rem: /product="transfer RNA-Ala (TGC)" #:C.jejuni.3:rem: tRNA 1965..2041 #:C.jejuni.3:rem: /evidence=experimental #:C.jejuni.3:rem: /standard_name="Isoleucine tRNA" #:C.jejuni.3:rem: /citation=[1] #:C.jejuni.3:rem: /anticodon=(pos:1999..2001,aa:Ile) #:C.jejuni.3:rem: /product="transfer RNA-Ile (GAT)" #:C.jejuni.3:rem: rRNA 2582..5471 #:C.jejuni.3:rem: /evidence=experimental #:C.jejuni.3:rem: /gene="rrl" #:C.jejuni.3:rem: /standard_name="large subunit rRNA" #:C.jejuni.3:rem: /citation=[1] #:C.jejuni.3:rem: /product="23S ribosomal RNA" #:C.jejuni.3:rem: rRNA 5717..5836 #:C.jejuni.3:rem: /evidence=experimental #:C.jejuni.3:rem: /citation=[1] #:C.jejuni.3:rem: /product="5S ribosomal RNA" #:C.jejuni.3:rem:BASE COUNT 1833 a 1082 c 1476 g 1605 t #:C.jejuni.4:name:Campylobacter jejuni ssp.jejuni #:C.jejuni.4:subsp: #:C.jejuni.4:strain: #:C.jejuni.4:atcc: #:C.jejuni.4:acs:X67767 #:C.jejuni.4:auth: #:C.jejuni.4:title: #:C.jejuni.4:jour: #:C.jejuni.4:who: #:C.jejuni.4:date: #:C.jejuni.4:rem:LOCUS CJJ6444 802 bp DNA BCT 13-DEC-1993 #:C.jejuni.4:rem:DEFINITION C.jejuni ssp.jejuni (LMG 6444) 23S rRNA gene #:C.jejuni.4:rem:ACCESSION X67767 #:C.jejuni.4:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.jejuni.4:rem:SOURCE Campylobacter jejuni #:C.jejuni.4:rem: ORGANISM Campylobacter jejuni #:C.jejuni.4:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.jejuni.4:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.jejuni.4:rem:REFERENCE 1 (bases 1 to 802) #:C.jejuni.4:rem: AUTHORS Van Camp,G. #:C.jejuni.4:rem: TITLE Direct Submission #:C.jejuni.4:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.jejuni.4:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.jejuni.4:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.jejuni.4:rem: STANDARD full automatic #:C.jejuni.4:rem:REFERENCE 2 (bases 1 to 802) #:C.jejuni.4:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.jejuni.4:rem: Wachter,R. #:C.jejuni.4:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.jejuni.4:rem: ribosomal RNA genes of Campylobacter #:C.jejuni.4:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.jejuni.4:rem: STANDARD full automatic #:C.jejuni.4:rem:FEATURES Location/Qualifiers #:C.jejuni.4:rem: source 1..802 #:C.jejuni.4:rem: /organism="Campylobacter jejuni" #:C.jejuni.4:rem: /strain="LMG 6444" #:C.jejuni.4:rem: /sub_strain="jejuni" #:C.jejuni.4:rem: rRNA <1..>802 #:C.jejuni.4:rem: /product="23S ribosomal RNA" #:C.jejuni.4:rem:BASE COUNT 232 a 147 c 213 g 199 t 11 others #:C.jejuni.4:rem:ORIGIN #:C.jejuni.5:name:Campylobacter jejuni ssp.doylei #:C.jejuni.5:subsp: #:C.jejuni.5:strain: #:C.jejuni.5:atcc: #:C.jejuni.5:acs:X67766 #:C.jejuni.5:auth: #:C.jejuni.5:title: #:C.jejuni.5:jour: #:C.jejuni.5:who: #:C.jejuni.5:date: #:C.jejuni.5:rem:LOCUS CJD23S 915 bp DNA BCT 13-DEC-1993 #:C.jejuni.5:rem:DEFINITION C.jejuni ssp.doylei 23S rRNA gene #:C.jejuni.5:rem:ACCESSION X67766 #:C.jejuni.5:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.jejuni.5:rem:SOURCE Campylobacter jejuni #:C.jejuni.5:rem: ORGANISM Campylobacter jejuni #:C.jejuni.5:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.jejuni.5:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.jejuni.5:rem:REFERENCE 1 (bases 1 to 915) #:C.jejuni.5:rem: AUTHORS Van Camp,G. #:C.jejuni.5:rem: TITLE Direct Submission #:C.jejuni.5:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.jejuni.5:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.jejuni.5:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.jejuni.5:rem: STANDARD full automatic #:C.jejuni.5:rem:REFERENCE 2 (bases 1 to 915) #:C.jejuni.5:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.jejuni.5:rem: Wachter,R. #:C.jejuni.5:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.jejuni.5:rem: ribosomal RNA genes of Campylobacter #:C.jejuni.5:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.jejuni.5:rem: STANDARD full automatic #:C.jejuni.5:rem:FEATURES Location/Qualifiers #:C.jejuni.5:rem: source 1..915 #:C.jejuni.5:rem: /organism="Campylobacter jejuni" #:C.jejuni.5:rem: /strain="LMG 7790" #:C.jejuni.5:rem: /sub_strain="doylei" #:C.jejuni.5:rem: rRNA <1..>915 #:C.jejuni.5:rem: /product="23S ribosomal RNA" #:C.jejuni.5:rem:BASE COUNT 285 a 151 c 239 g 237 t 3 others #:C.jejuni.5:rem:ORIGIN #:C.jejuni.6:name:Campylobacter jejuni #:C.jejuni.6:subsp: #:C.jejuni.6:strain: #:C.jejuni.6:atcc: #:C.jejuni.6:acs:X66616 #:C.jejuni.6:auth: #:C.jejuni.6:title: #:C.jejuni.6:jour: #:C.jejuni.6:who: #:C.jejuni.6:date: #:C.jejuni.6:rem:ID CJ23SR standard; DNA; PRO; 938 BP. #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:AC X66616; #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:DT 22-MAR-1994 (Rel. 39, Created) #:C.jejuni.6:rem:DT 22-MAR-1994 (Rel. 39, Last updated, Version 2) #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:DE C.jejuni 23S rRNA #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:KW 23S ribosomal RNA; ribosomal RNA. #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:OS Campylobacter jejuni #:C.jejuni.6:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.jejuni.6:rem:OC Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:RN [1] #:C.jejuni.6:rem:RP 1-938 #:C.jejuni.6:rem:RA Van Camp G.; #:C.jejuni.6:rem:RT ; #:C.jejuni.6:rem:RL Submitted (04-JUN-1992) to the EMBL/GenBank/DDBJ databases. #:C.jejuni.6:rem:RL G. Van Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.jejuni.6:rem:RL Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:RN [2] #:C.jejuni.6:rem:RP 1-938 #:C.jejuni.6:rem:RA Van Camp G., Chapelle S., De Wachter R.; #:C.jejuni.6:rem:RT "Amplification and sequencing of variable regions in bacterial 23S #:C.jejuni.6:rem:RT ribosomal RNA genes with conserved primer sequences"; #:C.jejuni.6:rem:RL Curr. Microbiol. 27:147-151(1993). #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:FH Key Location/Qualifiers #:C.jejuni.6:rem:FH #:C.jejuni.6:rem:FT source 1..938 #:C.jejuni.6:rem:FT /organism="Campylobacter jejuni" #:C.jejuni.6:rem:FT /strain="ATCC33250" #:C.jejuni.6:rem:FT rRNA 1..938 #:C.jejuni.6:rem:FT /partial #:C.jejuni.6:rem:FT /gene="23S rRNA" #:C.jejuni.6:rem:XX #:C.jejuni.6:rem:SQ Sequence 938 BP; 285 A; 159 C; 244 G; 246 T; 4 other; #:C.lari.1:name:Campylobacter lari #:C.lari.1:subsp: #:C.lari.1:strain: #:C.lari.1:atcc: #:C.lari.1:acs:X67769 #:C.lari.1:auth: #:C.lari.1:title: #:C.lari.1:jour: #:C.lari.1:who: #:C.lari.1:date: #:C.lari.1:rem:LOCUS CL23S 791 bp DNA BCT 13-DEC-1993 #:C.lari.1:rem:DEFINITION C.lari 23S rRNA gene #:C.lari.1:rem:ACCESSION X67769 #:C.lari.1:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.lari.1:rem:SOURCE Campylobacter lari #:C.lari.1:rem: ORGANISM Campylobacter lari #:C.lari.1:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.lari.1:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.lari.1:rem:REFERENCE 1 (bases 1 to 791) #:C.lari.1:rem: AUTHORS Van Camp,G. #:C.lari.1:rem: TITLE Direct Submission #:C.lari.1:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.lari.1:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.lari.1:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.lari.1:rem: STANDARD full automatic #:C.lari.1:rem:REFERENCE 2 (bases 1 to 791) #:C.lari.1:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.lari.1:rem: Wachter,R. #:C.lari.1:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.lari.1:rem: ribosomal RNA genes of Campylobacter #:C.lari.1:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.lari.1:rem: STANDARD full automatic #:C.lari.1:rem:FEATURES Location/Qualifiers #:C.lari.1:rem: source 1..791 #:C.lari.1:rem: /organism="Campylobacter lari" #:C.lari.1:rem: /strain="LMG 8846" #:C.lari.1:rem: rRNA <1..>804 #:C.lari.1:rem: /product="23S ribosomal RNA" #:C.lari.1:rem:BASE COUNT 227 a 148 c 219 g 197 t #:C.lari.1:rem:ORIGIN #:C.lari.2:auth:Stanley,J. #:C.lari.2:title:flagellin genes #:C.lari.2:name:Campylobacter lari. #:C.lari.2:subsp: #:C.lari.2:strain: #:C.lari.2:atcc: #:C.lari.2:acs:Y11764 #:C.lari.2:auth:Linton,D., Hurtado,A., Clewley,J.P., Chart,H., Owen,R.J. and #:C.lari.2:title:A Campylobacter group from fresh water with enlarged #:C.lari.2:jour:Unpublished #:C.lari.2:who: #:C.lari.2:date:12-MAR-1997 #:C.lari.2:rem:ref:1 (bases 1 to 2657) #:C.lari.2:rem:ref:2 (bases 1 to 2657) #:C.lari.2:rem:auth:Stanley,J. #:C.lari.2:rem:jour:Submitted (11-MAR-1997) J. Stanley, Central Public Health #:C.lari.2:rem:: Laboratory, Virus Reference Division, 61 Colindale Avenue, #:C.lari.2:rem:: NW9 5HT, UK #:C.lari.2:rem:title:Direct Submission #:C.lari.2:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:C.lari.2:rem:GenBank ACCESSION:Y11764 #:C.upsali.1:name:Campylobacter upsaliensis #:C.upsali.1:subsp: #:C.upsali.1:strain: #:C.upsali.1:atcc: #:C.upsali.1:acs:X67763 #:C.upsali.1:auth: #:C.upsali.1:title: #:C.upsali.1:jour: #:C.upsali.1:who: #:C.upsali.1:date: #:C.upsali.1:rem:LOCUS CU23S 807 bp DNA BCT 13-DEC-1993 #:C.upsali.1:rem:DEFINITION C.upsaliensis (LMG 7533) 23S rRNA gene #:C.upsali.1:rem:ACCESSION X67763 #:C.upsali.1:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.upsali.1:rem:SOURCE Campylobacter upsaliensis #:C.upsali.1:rem: ORGANISM Campylobacter upsaliensis #:C.upsali.1:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.upsali.1:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.upsali.1:rem:REFERENCE 1 (bases 1 to 807) #:C.upsali.1:rem: AUTHORS Van Camp,G. #:C.upsali.1:rem: TITLE Direct Submission #:C.upsali.1:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.upsali.1:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.upsali.1:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.upsali.1:rem: STANDARD full automatic #:C.upsali.1:rem:REFERENCE 2 (bases 1 to 807) #:C.upsali.1:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.upsali.1:rem: Wachter,R. #:C.upsali.1:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.upsali.1:rem: ribosomal RNA genes of Campylobacter #:C.upsali.1:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.upsali.1:rem: STANDARD full automatic #:C.upsali.1:rem:FEATURES Location/Qualifiers #:C.upsali.1:rem: source 1..807 #:C.upsali.1:rem: /organism="Campylobacter upsaliensis" #:C.upsali.1:rem: /strain="LMG 7533" #:C.upsali.1:rem: rRNA <1..>807 #:C.upsali.1:rem: /product="23S ribosomal RNA" #:C.upsali.1:rem:BASE COUNT 238 a 149 c 215 g 196 t 9 others #:C.upsali.1:rem:ORIGIN #:C.upsali.2:name:Campylobacter upsaliensis #:C.upsali.2:subsp: #:C.upsali.2:strain: #:C.upsali.2:atcc: #:C.upsali.2:acs:X67774 #:C.upsali.2:auth: #:C.upsali.2:title: #:C.upsali.2:jour: #:C.upsali.2:who: #:C.upsali.2:date: #:C.upsali.2:rem:LOCUS CU8854 996 bp DNA BCT 13-DEC-1993 #:C.upsali.2:rem:DEFINITION C.upsaliensis (LMG 8854) 23S rRNA gene #:C.upsali.2:rem:ACCESSION X67774 #:C.upsali.2:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.upsali.2:rem:SOURCE Campylobacter upsaliensis #:C.upsali.2:rem: ORGANISM Campylobacter upsaliensis #:C.upsali.2:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.upsali.2:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.upsali.2:rem:REFERENCE 1 (bases 1 to 996) #:C.upsali.2:rem: AUTHORS Van Camp,G. #:C.upsali.2:rem: TITLE Direct Submission #:C.upsali.2:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.upsali.2:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.upsali.2:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.upsali.2:rem: STANDARD full automatic #:C.upsali.2:rem:REFERENCE 2 (bases 1 to 996) #:C.upsali.2:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.upsali.2:rem: Wachter,R. #:C.upsali.2:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.upsali.2:rem: ribosomal RNA genes of Campylobacter #:C.upsali.2:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.upsali.2:rem: STANDARD full automatic #:C.upsali.2:rem:FEATURES Location/Qualifiers #:C.upsali.2:rem: source 1..996 #:C.upsali.2:rem: /organism="Campylobacter upsaliensis" #:C.upsali.2:rem: /strain="LMG 8854" #:C.upsali.2:rem: rRNA <1..>996 #:C.upsali.2:rem: /product="23S ribosomal RNA" #:C.upsali.2:rem:BASE COUNT 314 a 168 c 241 g 271 t 2 others #:C.upsali.2:rem:ORIGIN #:C.coli.1:name:Campylobacter coli #:C.coli.1:subsp: #:C.coli.1:strain: #:C.coli.1:atcc: #:C.coli.1:acs:X67764 #:C.coli.1:auth: #:C.coli.1:title: #:C.coli.1:jour: #:C.coli.1:who: #:C.coli.1:date: #:C.coli.1:rem:LOCUS CC6440 805 bp DNA BCT 13-DEC-1993 #:C.coli.1:rem:DEFINITION C.coli (LMG 6440) 23S rRNA gene #:C.coli.1:rem:ACCESSION X67764 #:C.coli.1:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.coli.1:rem:SOURCE Campylobacter coli #:C.coli.1:rem: ORGANISM Campylobacter coli #:C.coli.1:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.coli.1:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.coli.1:rem:REFERENCE 1 (bases 1 to 805) #:C.coli.1:rem: AUTHORS Van Camp,G. #:C.coli.1:rem: TITLE Direct Submission #:C.coli.1:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.coli.1:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.coli.1:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.coli.1:rem: STANDARD full automatic #:C.coli.1:rem:REFERENCE 2 (bases 1 to 805) #:C.coli.1:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.coli.1:rem: Wachter,R. #:C.coli.1:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.coli.1:rem: ribosomal RNA genes of Campylobacter #:C.coli.1:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.coli.1:rem: STANDARD full automatic #:C.coli.1:rem:FEATURES Location/Qualifiers #:C.coli.1:rem: source 1..805 #:C.coli.1:rem: /organism="Campylobacter coli" #:C.coli.1:rem: /strain="LMG 6440" #:C.coli.1:rem: rRNA <1..>805 #:C.coli.1:rem: /product="23S ribosomal RNA" #:C.coli.1:rem:BASE COUNT 231 a 154 c 222 g 198 t #:C.coli.1:rem:ORIGIN #:C.coli.2:name:Campylobacter coli #:C.coli.2:subsp: #:C.coli.2:strain: #:C.coli.2:atcc: #:C.coli.2:acs:X67770 #:C.coli.2:auth: #:C.coli.2:title: #:C.coli.2:jour: #:C.coli.2:who: #:C.coli.2:date: #:C.coli.2:rem:LOCUS CC7535 804 bp DNA BCT 13-DEC-1993 #:C.coli.2:rem:DEFINITION C.coli (LMG 7535) 23S rRNA gene #:C.coli.2:rem:ACCESSION X67770 #:C.coli.2:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.coli.2:rem:SOURCE Campylobacter coli #:C.coli.2:rem: ORGANISM Campylobacter coli #:C.coli.2:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.coli.2:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.coli.2:rem:REFERENCE 1 (bases 1 to 804) #:C.coli.2:rem: AUTHORS Van Camp,G. #:C.coli.2:rem: TITLE Direct Submission #:C.coli.2:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.coli.2:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.coli.2:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.coli.2:rem: STANDARD full automatic #:C.coli.2:rem:REFERENCE 2 (bases 1 to 804) #:C.coli.2:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.coli.2:rem: Wachter,R. #:C.coli.2:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.coli.2:rem: ribosomal RNA genes of Campylobacter #:C.coli.2:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.coli.2:rem: STANDARD full automatic #:C.coli.2:rem:FEATURES Location/Qualifiers #:C.coli.2:rem: source 1..804 #:C.coli.2:rem: /organism="Campylobacter coli" #:C.coli.2:rem: /strain="LMG 7535" #:C.coli.2:rem: rRNA <1..>791 #:C.coli.2:rem: /product="23S ribosomal RNA" #:C.coli.2:rem:BASE COUNT 234 a 148 c 212 g 203 t 7 others #:C.coli.2:rem:ORIGIN #:C.coli.3:name:Campylobacter coli #:C.coli.3:subsp: #:C.coli.3:strain: #:C.coli.3:atcc: #:C.coli.3:acs:U09611 #:C.coli.3:auth: #:C.coli.3:title: #:C.coli.3:jour: #:C.coli.3:who:T.Trust/Susan Logan #:C.coli.3:date: #:C.coli.3:rem:LOCUS CCU09611 3057 bp DNA BCT 12-JUN-1994 #:C.coli.3:rem:DEFINITION Campylobacter coli VC167 23S ribosomal RNA gene. #:C.coli.3:rem:ACCESSION U09611 #:C.coli.3:rem:KEYWORDS . #:C.coli.3:rem:SOURCE Campylobacter coli #:C.coli.3:rem: ORGANISM Campylobacter coli #:C.coli.3:rem: Eubacteria; Proteobacteria; epsilon subdivision; Campylobacter. #:C.coli.3:rem:REFERENCE 1 (bases 1 to 3057) #:C.coli.3:rem: AUTHORS Trust,T.J., Logan,S.M., Gustafson,C.G., Romaniuk,P.J., Kim,N.W., #:C.coli.3:rem: Chan,V.L., Ragan,M.A., Guerry,P. and Gutell,R.R. #:C.coli.3:rem: TITLE Phylogenetic and molecular characterization of a 23S ribosomal RNA #:C.coli.3:rem: gene positions Campylobacter in the epsilon subdivision of the #:C.coli.3:rem: Proteobacteria and shows the presence of intervening sequences is #:C.coli.3:rem: common in Campylobacter #:C.coli.3:rem: JOURNAL Unpublished #:C.coli.3:rem: STANDARD full automatic #:C.coli.3:rem:REFERENCE 2 (bases 1 to 3057) #:C.coli.3:rem: AUTHORS Trust,T.J. #:C.coli.3:rem: TITLE Direct Submission #:C.coli.3:rem: JOURNAL Submitted (11-MAY-1994) Trevor J Trust, Biochemistry and #:C.coli.3:rem: Microbiology, University of Victoria, Petch Building, Victoria, #:C.coli.3:rem: B.C., V8W 3P6, Canada #:C.coli.3:rem: STANDARD full automatic #:C.coli.3:rem:COMMENT #:C.coli.3:rem: NCBI gi: 498572 #:C.coli.3:rem:FEATURES Location/Qualifiers #:C.coli.3:rem: rRNA join(1..1192,1340..3057) #:C.coli.3:rem: /product="23S rRNA" #:C.coli.3:rem: intron 1193..1339 #:C.coli.3:rem: /label=IVS #:C.coli.3:rem: /note="intervening sequence" #:C.coli.3:rem: source 1..3057 #:C.coli.3:rem: /strain="VC167" #:C.coli.3:rem: /organism="Campylobacter coli" #:C.coli.3:rem:BASE COUNT 913 a 579 c 832 g 733 t #:C.coli.3:rem:ORIGIN #:C.hyointes:name:Campylobacter hyointestinali #:C.hyointes:subsp: #:C.hyointes:strain: #:C.hyointes:atcc: #:C.hyointes:acs:X67761 #:C.hyointes:auth: #:C.hyointes:title: #:C.hyointes:jour: #:C.hyointes:who: #:C.hyointes:date: #:C.hyointes:rem:LOCUS CH23S 805 bp DNA BCT 13-DEC-1993 #:C.hyointes:rem:DEFINITION C.hyointestinalis 23S rRNA gene #:C.hyointes:rem:ACCESSION X67761 #:C.hyointes:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.hyointes:rem:SOURCE Campylobacter hyointestinalis #:C.hyointes:rem: ORGANISM Campylobacter hyointestinalis #:C.hyointes:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.hyointes:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.hyointes:rem:REFERENCE 1 (bases 1 to 805) #:C.hyointes:rem: AUTHORS Van Camp,G. #:C.hyointes:rem: TITLE Direct Submission #:C.hyointes:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.hyointes:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.hyointes:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.hyointes:rem: STANDARD full automatic #:C.hyointes:rem:REFERENCE 2 (bases 1 to 805) #:C.hyointes:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.hyointes:rem: Wachter,R. #:C.hyointes:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.hyointes:rem: ribosomal RNA genes of Campylobacter #:C.hyointes:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.hyointes:rem: STANDARD full automatic #:C.hyointes:rem:FEATURES Location/Qualifiers #:C.hyointes:rem: source 1..805 #:C.hyointes:rem: /organism="Campylobacter hyointestinalis" #:C.hyointes:rem: /strain="LMG 2817" #:C.hyointes:rem: rRNA <1..>805 #:C.hyointes:rem: /product="23S ribosomal RNA" #:C.hyointes:rem:BASE COUNT 237 a 147 c 206 g 206 t 9 others #:C.hyointes:rem:ORIGIN #:C.fetus.1:name:Campylobacter fetus #:C.fetus.1:subsp: #:C.fetus.1:strain: #:C.fetus.1:atcc: #:C.fetus.1:acs:X67762 #:C.fetus.1:auth: #:C.fetus.1:title: #:C.fetus.1:jour: #:C.fetus.1:who: #:C.fetus.1:date: #:C.fetus.1:rem:LOCUS CF23S 930 bp DNA BCT 13-DEC-1993 #:C.fetus.1:rem:DEFINITION C.fetus 23S rRNA gene #:C.fetus.1:rem:ACCESSION X67762 #:C.fetus.1:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.fetus.1:rem:SOURCE Campylobacter fetus #:C.fetus.1:rem: ORGANISM Campylobacter fetus #:C.fetus.1:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.fetus.1:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.fetus.1:rem:REFERENCE 1 (bases 1 to 930) #:C.fetus.1:rem: AUTHORS Van Camp,G. #:C.fetus.1:rem: TITLE Direct Submission #:C.fetus.1:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.fetus.1:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.fetus.1:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.fetus.1:rem: STANDARD full automatic #:C.fetus.1:rem:REFERENCE 2 (bases 1 to 930) #:C.fetus.1:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.fetus.1:rem: Wachter,R. #:C.fetus.1:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.fetus.1:rem: ribosomal RNA genes of Campylobacter #:C.fetus.1:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.fetus.1:rem: STANDARD full automatic #:C.fetus.1:rem:FEATURES Location/Qualifiers #:C.fetus.1:rem: source 1..930 #:C.fetus.1:rem: /organism="Campylobacter fetus" #:C.fetus.1:rem: /strain="LMG 6442" #:C.fetus.1:rem: /sub_strain="fetus" #:C.fetus.1:rem: rRNA <1..>930 #:C.fetus.1:rem: /product="23S ribosomal RNA" #:C.fetus.1:rem:BASE COUNT 289 a 158 c 225 g 254 t 4 others #:C.fetus.1:rem:ORIGIN #:C.fetus.2:name:Campylobacter fetu #:C.fetus.2:subsp: #:C.fetus.2:strain: #:C.fetus.2:atcc: #:C.fetus.2:acs:X67773 #:C.fetus.2:auth: #:C.fetus.2:title: #:C.fetus.2:jour: #:C.fetus.2:who: #:C.fetus.2:date: #:C.fetus.2:rem:LOCUS CFV23S 927 bp DNA BCT 13-DEC-1993 #:C.fetus.2:rem:DEFINITION C.fetus venerealis 23S rRNA gene #:C.fetus.2:rem:ACCESSION X67773 #:C.fetus.2:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.fetus.2:rem:SOURCE Campylobacter fetus #:C.fetus.2:rem: ORGANISM Campylobacter fetus #:C.fetus.2:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.fetus.2:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.fetus.2:rem:REFERENCE 1 (bases 1 to 927) #:C.fetus.2:rem: AUTHORS Van Camp,G. #:C.fetus.2:rem: TITLE Direct Submission #:C.fetus.2:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.fetus.2:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.fetus.2:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.fetus.2:rem: STANDARD full automatic #:C.fetus.2:rem:REFERENCE 2 (bases 1 to 927) #:C.fetus.2:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.fetus.2:rem: Wachter,R. #:C.fetus.2:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.fetus.2:rem: ribosomal RNA genes of Campylobacter #:C.fetus.2:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.fetus.2:rem: STANDARD full automatic #:C.fetus.2:rem:FEATURES Location/Qualifiers #:C.fetus.2:rem: source 1..927 #:C.fetus.2:rem: /organism="Campylobacter fetus" #:C.fetus.2:rem: /strain="LMG 6570" #:C.fetus.2:rem: /sub_strain="ssp. venerealis" #:C.fetus.2:rem: rRNA <1..>907 #:C.fetus.2:rem: /product="23S ribosomal RNA" #:C.fetus.2:rem:BASE COUNT 287 a 159 c 227 g 253 t 1 others #:C.fetus.2:rem:ORIGIN #:C.mucosa.1:name:Campylobacter mucosalis #:C.mucosa.1:subsp: #:C.mucosa.1:strain: #:C.mucosa.1:atcc: #:C.mucosa.1:acs:X67760 #:C.mucosa.1:auth: #:C.mucosa.1:title: #:C.mucosa.1:jour: #:C.mucosa.1:who: #:C.mucosa.1:date: #:C.mucosa.1:rem:LOCUS CM23S 823 bp DNA BCT 13-DEC-1993 #:C.mucosa.1:rem:DEFINITION C.mucosalis 23S rRNA gene #:C.mucosa.1:rem:ACCESSION X67760 #:C.mucosa.1:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.mucosa.1:rem:SOURCE Campylobacter mucosalis #:C.mucosa.1:rem: ORGANISM Campylobacter mucosalis #:C.mucosa.1:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.mucosa.1:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.mucosa.1:rem:REFERENCE 1 (bases 1 to 823) #:C.mucosa.1:rem: AUTHORS Van Camp,G. #:C.mucosa.1:rem: TITLE Direct Submission #:C.mucosa.1:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.mucosa.1:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.mucosa.1:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.mucosa.1:rem: STANDARD full automatic #:C.mucosa.1:rem:REFERENCE 2 (bases 1 to 823) #:C.mucosa.1:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.mucosa.1:rem: Wachter,R. #:C.mucosa.1:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.mucosa.1:rem: ribosomal RNA genes of Campylobacter #:C.mucosa.1:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.mucosa.1:rem: STANDARD full automatic #:C.mucosa.1:rem:FEATURES Location/Qualifiers #:C.mucosa.1:rem: source 1..823 #:C.mucosa.1:rem: /organism="Campylobacter mucosalis" #:C.mucosa.1:rem: /strain="LMG 7794" #:C.mucosa.1:rem: rRNA <1..>823 #:C.mucosa.1:rem: /product="23S ribosomal RNA" #:C.mucosa.1:rem:BASE COUNT 242 a 150 c 213 g 202 t 16 others #:C.mucosa.1:rem:ORIGIN #:C.mucosa.2:name:Campylobacter mucosalis #:C.mucosa.2:subsp: #:C.mucosa.2:strain: #:C.mucosa.2:atcc: #:C.mucosa.2:acs:X80636 #:C.mucosa.2:auth: #:C.mucosa.2:title: #:C.mucosa.2:jour: #:C.mucosa.2:who: #:C.mucosa.2:date: #:C.mucosa.2:rem:LOCUS CM23SRIBR 805 bp DNA BCT 22-MAR-1995 #:C.mucosa.2:rem:DEFINITION C.mucosalis gene for 23S ribosomal RNA (fragment). #:C.mucosa.2:rem:ACCESSION X80636 #:C.mucosa.2:rem:KEYWORDS 23S ribosomal RNA. #:C.mucosa.2:rem:SOURCE Campylobacter mucosalis. #:C.mucosa.2:rem: ORGANISM Campylobacter mucosalis #:C.mucosa.2:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.mucosa.2:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.mucosa.2:rem:REFERENCE 1 (bases 1 to 805) #:C.mucosa.2:rem: AUTHORS Bastyns,K., Chapelle,S., Lemmens,C., Van Damme,P., Goossens,H. and #:C.mucosa.2:rem: De Wachter,R. #:C.mucosa.2:rem: TITLE Species -specific detection of campylobacteria important in #:C.mucosa.2:rem: veterinary medicine by PCR amplification of 23S rRNA fragments #:C.mucosa.2:rem: JOURNAL Unpublished #:C.mucosa.2:rem:REFERENCE 2 (bases 1 to 805) #:C.mucosa.2:rem: AUTHORS Bastyns,K. #:C.mucosa.2:rem: TITLE Direct Submission #:C.mucosa.2:rem: JOURNAL Submitted (22-JUL-1994) to the EMBL/GenBank/DDBJ databases. K. #:C.mucosa.2:rem: Bastyns, University of Antwerpen (UIA), Dept of Biochemie, Building #:C.mucosa.2:rem: T, Universiteitsplein 1, 2610 Wilrijk, BELGIUM #:C.mucosa.2:rem:REFERENCE 3 (bases 1 to 805) #:C.mucosa.2:rem: AUTHORS Bastyns,K., Chapelli,S., Vandamme,P., Goossens,H. and De #:C.mucosa.2:rem: Wacheter,R. #:C.mucosa.2:rem: TITLE Species-specific detection of campylobacters important in #:C.mucosa.2:rem: veterinary medicine by PCR amplification of 23S rDNA areas #:C.mucosa.2:rem: JOURNAL Syst. Appl. Microbiol. 17, 563-568 (1994) #:C.mucosa.2:rem:COMMENT #:C.mucosa.2:rem: NCBI gi: 735955 #:C.mucosa.2:rem:FEATURES Location/Qualifiers #:C.mucosa.2:rem: source 1..805 #:C.mucosa.2:rem: /organism="Campylobacter mucosalis" #:C.mucosa.2:rem: /strain="LMG 6448T" #:C.mucosa.2:rem: rRNA <1..>805 #:C.mucosa.2:rem: /note="positions 1 and 805 of the partial 23S rDNA #:C.mucosa.2:rem: fragment correspond to position 1060 and 1935 in the #:C.mucosa.2:rem: E.coli 23S rDNA gene" #:C.mucosa.2:rem: /product="23S ribosomal RNA" #:C.mucosa.2:rem:BASE COUNT 226 a 158 c 224 g 194 t 3 others #:C.mucosa.2:rem:ORIGIN #:C.concisus:name:Campylobacter concisus #:C.concisus:subsp: #:C.concisus:strain: #:C.concisus:atcc: #:C.concisus:acs:X67759 #:C.concisus:auth: #:C.concisus:title: #:C.concisus:jour: #:C.concisus:who: #:C.concisus:date: #:C.concisus:rem:LOCUS CC23S 816 bp DNA BCT 13-DEC-1993 #:C.concisus:rem:DEFINITION C.concisus 23S rRNA gene #:C.concisus:rem:ACCESSION X67759 #:C.concisus:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.concisus:rem:SOURCE Campylobacter concisus #:C.concisus:rem: ORGANISM Campylobacter concisus #:C.concisus:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.concisus:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.concisus:rem:REFERENCE 1 (bases 1 to 816) #:C.concisus:rem: AUTHORS Van Camp,G. #:C.concisus:rem: TITLE Direct Submission #:C.concisus:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.concisus:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.concisus:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.concisus:rem: STANDARD full automatic #:C.concisus:rem:REFERENCE 2 (bases 1 to 816) #:C.concisus:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.concisus:rem: Wachter,R. #:C.concisus:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.concisus:rem: ribosomal RNA genes of Campylobacter #:C.concisus:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.concisus:rem: STANDARD full automatic #:C.concisus:rem:FEATURES Location/Qualifiers #:C.concisus:rem: source 1..816 #:C.concisus:rem: /organism="Campylobacter concisus" #:C.concisus:rem: /strain="LMG 7788" #:C.concisus:rem: rRNA <1..>816 #:C.concisus:rem: /product="23S ribosomal RNA" #:C.concisus:rem:BASE COUNT 231 a 156 c 219 g 205 t 5 others #:C.concisus:rem:ORIGIN #:C.s.bubulu:name:Campylobacter sputorum bubulus #:C.s.bubulu:subsp: #:C.s.bubulu:strain: #:C.s.bubulu:atcc: #:C.s.bubulu:acs:X67772 #:C.s.bubulu:auth: #:C.s.bubulu:title: #:C.s.bubulu:jour: #:C.s.bubulu:who: #:C.s.bubulu:date: #:C.s.bubulu:rem:LOCUS CSB23S 780 bp DNA BCT 13-DEC-1993 #:C.s.bubulu:rem:DEFINITION C.sputorum bubulus 23S rRNA gene #:C.s.bubulu:rem:ACCESSION X67772 #:C.s.bubulu:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.s.bubulu:rem:SOURCE Campylobacter sputorum #:C.s.bubulu:rem: ORGANISM Campylobacter sputorum #:C.s.bubulu:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.s.bubulu:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.s.bubulu:rem:REFERENCE 1 (bases 1 to 780) #:C.s.bubulu:rem: AUTHORS Van Camp,G. #:C.s.bubulu:rem: TITLE Direct Submission #:C.s.bubulu:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.s.bubulu:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.s.bubulu:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.s.bubulu:rem: STANDARD full automatic #:C.s.bubulu:rem:REFERENCE 2 (bases 1 to 780) #:C.s.bubulu:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.s.bubulu:rem: Wachter,R. #:C.s.bubulu:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.s.bubulu:rem: ribosomal RNA genes of Campylobacter #:C.s.bubulu:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.s.bubulu:rem: STANDARD full automatic #:C.s.bubulu:rem:FEATURES Location/Qualifiers #:C.s.bubulu:rem: source 1..780 #:C.s.bubulu:rem: /organism="Campylobacter sputorum" #:C.s.bubulu:rem: /strain="biovar bubulus;LMG 6447" #:C.s.bubulu:rem: rRNA <1..>780 #:C.s.bubulu:rem: /product="23S ribosomal RNA" #:C.s.bubulu:rem:BASE COUNT 225 a 145 c 210 g 198 t 2 others #:C.s.bubulu:rem:ORIGIN #:C.s.fecali:name:Campylobacter sputorum fecalis #:C.s.fecali:subsp: #:C.s.fecali:strain: #:C.s.fecali:atcc: #:C.s.fecali:acs:X67758 #:C.s.fecali:auth: #:C.s.fecali:title: #:C.s.fecali:jour: #:C.s.fecali:who: #:C.s.fecali:date: #:C.s.fecali:rem:LOCUS CSF23S 793 bp DNA BCT 13-DEC-1993 #:C.s.fecali:rem:DEFINITION C.sputorum fecalis 23S rRNA gene #:C.s.fecali:rem:ACCESSION X67758 #:C.s.fecali:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.s.fecali:rem:SOURCE Campylobacter sputorum #:C.s.fecali:rem: ORGANISM Campylobacter sputorum #:C.s.fecali:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.s.fecali:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.s.fecali:rem:REFERENCE 1 (bases 1 to 793) #:C.s.fecali:rem: AUTHORS Van Camp,G. #:C.s.fecali:rem: TITLE Direct Submission #:C.s.fecali:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.s.fecali:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.s.fecali:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.s.fecali:rem: STANDARD full automatic #:C.s.fecali:rem:REFERENCE 2 (bases 1 to 793) #:C.s.fecali:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.s.fecali:rem: Wachter,R. #:C.s.fecali:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.s.fecali:rem: ribosomal RNA genes of Campylobacter #:C.s.fecali:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.s.fecali:rem: STANDARD full automatic #:C.s.fecali:rem:FEATURES Location/Qualifiers #:C.s.fecali:rem: source 1..793 #:C.s.fecali:rem: /organism="Campylobacter sputorum" #:C.s.fecali:rem: /strain="biovar fecalis;LMG 6617" #:C.s.fecali:rem: rRNA <1..>793 #:C.s.fecali:rem: /product="23S ribosomal RNA" #:C.s.fecali:rem:BASE COUNT 230 a 149 c 207 g 198 t 9 others #:C.s.fecali:rem:ORIGIN #:C.s.sputor:name:Campylobacter sputorum sputorum #:C.s.sputor:subsp: #:C.s.sputor:strain: #:C.s.sputor:atcc: #:C.s.sputor:acs:X67768 #:C.s.sputor:auth: #:C.s.sputor:title: #:C.s.sputor:jour: #:C.s.sputor:who: #:C.s.sputor:date: #:C.s.sputor:rem:LOCUS CSS23S 791 bp DNA BCT 13-DEC-1993 #:C.s.sputor:rem:DEFINITION C.sputorum sputorum (LMG 7795) 23S rRNA gene #:C.s.sputor:rem:ACCESSION X67768 #:C.s.sputor:rem:KEYWORDS 23S ribosomal RNA; ribosomal RNA. #:C.s.sputor:rem:SOURCE Campylobacter sputorum #:C.s.sputor:rem: ORGANISM Campylobacter sputorum #:C.s.sputor:rem: Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:C.s.sputor:rem: Aerobic/microaerophilic, motile, helical/vibrioid bacteria. #:C.s.sputor:rem:REFERENCE 1 (bases 1 to 791) #:C.s.sputor:rem: AUTHORS Van Camp,G. #:C.s.sputor:rem: TITLE Direct Submission #:C.s.sputor:rem: JOURNAL Submitted (19-OCT-1992) to the EMBL/GenBank/DDBJ databases. G. Van #:C.s.sputor:rem: Camp, University of Antwerp (UIA), Dept of Biochemistry, #:C.s.sputor:rem: Universiteitsplein 1, B-2610 Antwerpen, BELGIUM #:C.s.sputor:rem: STANDARD full automatic #:C.s.sputor:rem:REFERENCE 2 (bases 1 to 791) #:C.s.sputor:rem: AUTHORS Van Camp,G., Van de Peer,Y., Neefs,J.M., Vandamme,P. and De #:C.s.sputor:rem: Wachter,R. #:C.s.sputor:rem: TITLE Presence of internal transcribed spacers in the 16S and 23S #:C.s.sputor:rem: ribosomal RNA genes of Campylobacter #:C.s.sputor:rem: JOURNAL Syst. Appl. Microbiol. 16, 361-368 (1993) #:C.s.sputor:rem: STANDARD full automatic #:C.s.sputor:rem:FEATURES Location/Qualifiers #:C.s.sputor:rem: source 1..791 #:C.s.sputor:rem: /organism="Campylobacter sputorum" #:C.s.sputor:rem: /strain="biovar sputorum;LMG 7795" #:C.s.sputor:rem: rRNA <1..>791 #:C.s.sputor:rem: /product="23S ribosomal RNA" #:C.s.sputor:rem:BASE COUNT 228 a 149 c 210 g 197 t 7 others #:C.s.sputor:rem:ORIGIN #:GRAM+.HIGH:name: #:GRAM+.HIGH:subsp: #:GRAM+.HIGH:strain: #:GRAM+.HIGH:atcc: #:GRAM+.HIGH:acs:DIVIDER #:GRAM+.HIGH:auth: #:GRAM+.HIGH:title: #:GRAM+.HIGH:jour: #:GRAM+.HIGH:who:Robin Gutell,MCDB-256,28595,7868901 #:GRAM+.HIGH:date:Fri Dec 17 18:05:36 1993 #:Frankia.1:name:Frankia sp. #:Frankia.1:subsp: #:Frankia.1:strain: #:Frankia.1:atcc: #:Frankia.1:acs:M55343 #:Frankia.1:auth: #:Frankia.1:title: #:Frankia.1:jour: #:Frankia.1:who: #:Frankia.1:date: #:Frankia.1:rem:LOCUS FRARRNA 6481 bp ds-DNA BCT 12-FEB-1991 #:Frankia.1:rem:DEFINITION Frankia sp. 5S, 16S, and 23S ribosomal RNA genes, complete cds. #:Frankia.1:rem:ACCESSION M55343 #:Frankia.1:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA. #:Frankia.1:rem:SOURCE Frankia sp. (strain CeD) DNA, clone O1RNA1. #:Frankia.1:rem: ORGANISM Frankia sp. #:Frankia.1:rem: Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:Frankia.1:rem: Actinomycetes with multilocular sporangia. #:Frankia.1:rem:REFERENCE 1 (bases 1 to 6481) #:Frankia.1:rem: AUTHORS Normand,P. #:Frankia.1:rem: TITLE ; #:Frankia.1:rem: JOURNAL Unpublished (1990) #:Frankia.1:rem: STANDARD simple staff_review #:Frankia.1:rem:FEATURES Location/Qualifiers #:Frankia.1:rem: promoter 117..146 #:Frankia.1:rem: /note="putative" #:Frankia.1:rem: promoter 248..276 #:Frankia.1:rem: /note="putative" #:Frankia.1:rem: rRNA 528..2039 #:Frankia.1:rem: /gene="16S rRNA" #:Frankia.1:rem: /product="16S ribosomal RNA" #:Frankia.1:rem: rRNA 2451..5549 #:Frankia.1:rem: /gene="23S rRNA" #:Frankia.1:rem: /product="23S ribosomal RNA" #:Frankia.1:rem: rRNA 5618..5736 #:Frankia.1:rem: /gene="5S rRNA" #:Frankia.1:rem: /product="5S ribosomal RNA" #:Frankia.1:rem: terminator 5737..5789 #:Frankia.1:rem: promoter 5841..5869 #:Frankia.1:rem: /note="putative" #:Frankia.1:rem: CDS 5927..6481 #:Frankia.1:rem: /note="open reading frame" #:Frankia.1:rem: /codon_start=1 #:Frankia.1:rem: /partial #:Frankia.1:rem:BASE COUNT 1333 a 1592 c 2268 g 1288 t #:Frankia.1:rem:ORIGIN #:Frankia.2:name:Frankia sp. #:Frankia.2:subsp: #:Frankia.2:strain: #:Frankia.2:atcc: #:Frankia.2:acs:M88466 #:Frankia.2:auth: #:Frankia.2:title: #:Frankia.2:jour: #:Frankia.2:who: #:Frankia.2:date: #:Frankia.2:rem:LOCUS FRARGOP 6059 bp ds-DNA BCT 25-SEP-1992 #:Frankia.2:rem:DEFINITION Frankia sp. rRNA operon with 5S, 16S and 23S ribosomal RNA genes. #:Frankia.2:rem:ACCESSION M88466 #:Frankia.2:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA. #:Frankia.2:rem:SOURCE Frankia sp. (strain AcN14a) DNA. #:Frankia.2:rem: ORGANISM Frankia sp. #:Frankia.2:rem: Prokaryotae; Firmicutes; Thallobacteria; #:Frankia.2:rem: Actinomycetes and related organisms; #:Frankia.2:rem: Actinomycetes with multilocular sporangia. #:Frankia.2:rem:REFERENCE 1 (bases 1 to 6059) #:Frankia.2:rem: AUTHORS Johnson,D.A. and Prud'homme,M. #:Frankia.2:rem: TITLE Analysis of a rRNA operon from Frankia strain AcN14a #:Frankia.2:rem: JOURNAL Thesis (1992) Biology, University of Ottawa #:Frankia.2:rem: STANDARD full staff_entry #:Frankia.2:rem:FEATURES Location/Qualifiers #:Frankia.2:rem: rRNA 599..2107 #:Frankia.2:rem: /product="16S ribosomal RNA" #:Frankia.2:rem: /gene="16S rRNA" #:Frankia.2:rem: /note="putative" #:Frankia.2:rem: rRNA 2529..5632 #:Frankia.2:rem: /product="23S ribosomal RNA" #:Frankia.2:rem: /gene="23S rRNA" #:Frankia.2:rem: /note="putative" #:Frankia.2:rem: rRNA 5706..5825 #:Frankia.2:rem: /product="5S ribosomal RNA" #:Frankia.2:rem: /gene="5S rRNA" #:Frankia.2:rem: /note="putative" #:Frankia.2:rem:BASE COUNT 1237 a 1486 c 2105 g 1231 t #:Frankia.2:rem:ORIGIN #:S.galbus:name:Streptomyces galbus #:S.galbus:subsp: #:S.galbus:strain: #:S.galbus:atcc: #:S.galbus:acs:X81577 #:S.galbus:auth:Mehling,A., Wehmeier,U.F. and Piepersberg,W. #:S.galbus:title: #:S.galbus:jour: #:S.galbus:who: #:S.galbus:date: #:S.galbus:rem:LOCUS SG23SRNA 1101 bp RNA BCT 26-SEP-1994 #:S.galbus:rem:DEFINITION S.galbus 23S rRNA gene (partial). #:S.galbus:rem:ACCESSION X81577 #:S.galbus:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene; 5S ribosomal RNA; 5S rRNA gene. #:S.galbus:rem:SOURCE Streptomyces galbus. #:S.galbus:rem: ORGANISM Streptomyces galbus #:S.galbus:rem: Prokaryota; Bacteria; Firmicutes; Streptomycetaceae. #:S.galbus:rem:REFERENCE 1 (bases 1 to 1101) #:S.galbus:rem: AUTHORS Mehling,A., Wehmeier,U.F. and Piepersberg,W. #:S.galbus:rem: TITLE Use of the 'reverse' sequencing primer for random amplified #:S.galbus:rem: polymorphic DNA (RAPD) fingerprinting assays of actinomycetes #:S.galbus:rem: JOURNAL Unpublished #:S.galbus:rem: STANDARD full automatic #:S.galbus:rem:REFERENCE 2 (bases 1 to 1101) #:S.galbus:rem: AUTHORS Piepersberg,W.M. #:S.galbus:rem: TITLE Direct Submission #:S.galbus:rem: JOURNAL Submitted (13-SEP-1994) to the EMBL/GenBank/DDBJ databases. W.M. #:S.galbus:rem: Piepersberg, Bergische Univ. Gesamthochschule, Wuppertal, Inst. #:S.galbus:rem: fuer Chemische Mikrobiologie, Gaussstr. 20, 42097 Wuppertal, FRG #:S.galbus:rem: STANDARD full automatic #:S.galbus:rem:COMMENT #:S.galbus:rem: NCBI gi: 550430 #:S.galbus:rem:FEATURES Location/Qualifiers #:S.galbus:rem: source 1..1101 #:S.galbus:rem: /organism="Streptomyces galbus" #:S.galbus:rem: /strain="DSM40089" #:S.galbus:rem: rRNA <1..993 #:S.galbus:rem: /product="23S ribosomal RNA" #:S.galbus:rem: primer_bind 1..16 #:S.galbus:rem: rRNA 1080..>1101 #:S.galbus:rem: /product="5S ribosomal RNA" #:S.galbus:rem: primer_bind 1087..1101 #:S.galbus:rem:BASE COUNT 229 a 259 c 360 g 253 t #:S.galbus:rem:ORIGIN #:S.griseus:name:Streptomyces griseus #:S.griseus:subsp: #:S.griseus:strain: #:S.griseus:atcc: #:S.griseus:acs:X61478 #:S.griseus:auth: #:S.griseus:title: #:S.griseus:jour: #:S.griseus:who: #:S.griseus:date: #:S.griseus:rem:LOCUS STM16SRNB 6869 bp ds-DNA BCT 19-SEP-1991 #:S.griseus:rem:DEFINITION S.griseus genes for 16S rRNA, 23S rRNA & 5S rRNA #:S.griseus:rem:ACCESSION X61478 #:S.griseus:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; rrnE gene. #:S.griseus:rem:SOURCE Streptomyces griseus DNA. #:S.griseus:rem: ORGANISM Streptomyces griseus #:S.griseus:rem: Prokaryota; Bacteria; Firmicutes; Streptomycetaceae. #:S.griseus:rem:REFERENCE 1 (bases 1 to 6869) #:S.griseus:rem: AUTHORS Kim,E., Kim,H., Kang,K.H., Kho,Y.H. and Park,Y.H. #:S.griseus:rem: TITLE Complete nucleotide sequence of a 16S ribosomal RNA gene from #:S.griseus:rem: Streptomyces griseus subsp. griseus #:S.griseus:rem: JOURNAL Nucleic Acids Res. 19, 1149-1149 (1991) #:S.griseus:rem: STANDARD full automatic #:S.griseus:rem:COMMENT *source: strain=ssp.griseus KCTC 9080; *source: is_macronuclear=N; #:S.griseus:rem: *source: is_proviral=N; *source: is_germline=N; #:S.griseus:rem: From EMBL entry SG16SRNA; dated 04-SEP-1991. #:S.griseus:rem:FEATURES Location/Qualifiers #:S.griseus:rem: rRNA 1079..2606 #:S.griseus:rem: /product="16S rRNA" #:S.griseus:rem: rRNA 2911..6030 #:S.griseus:rem: /product="23S rRNA" #:S.griseus:rem: rRNA 6140..6295 #:S.griseus:rem: /product="5S rRNA" #:S.griseus:rem: /gene="rrnE" #:S.griseus:rem: terminator 6267..6311 #:S.griseus:rem:BASE COUNT 1495 a 1765 c 2296 g 1313 t #:S.griseus:rem:ORIGIN #:A.oriental:name:Amycolatopsis orientalis #:A.oriental:subsp: #:A.oriental:strain: #:A.oriental:atcc: #:A.oriental:acs:X81576 #:A.oriental:auth: #:A.oriental:title: #:A.oriental:jour: #:A.oriental:who: #:A.oriental:date: #:A.oriental:rem:LOCUS AO23SRNA 1089 bp RNA BCT 26-SEP-1994 #:A.oriental:rem:DEFINITION A.orientalis 23S rRNA gene (partial). #:A.oriental:rem:ACCESSION X81576 #:A.oriental:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene; 5S ribosomal RNA; 5S rRNA gene. #:A.oriental:rem:SOURCE Amycolatopsis orientalis. #:A.oriental:rem: ORGANISM Amycolatopsis orientalis #:A.oriental:rem: Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:A.oriental:rem: Actinomycetes and related organisms; Pseudonocardiaceae. #:A.oriental:rem:REFERENCE 1 (bases 1 to 1089) #:A.oriental:rem: AUTHORS Mehling,A., Wehmeier,U.F. and Piepersberg,W. #:A.oriental:rem: TITLE Use of the 'reverse' sequencing primer for random amplified #:A.oriental:rem: polymorphic DNA (RAPD) fingerprinting assays of actinomycetes #:A.oriental:rem: JOURNAL Unpublished #:A.oriental:rem: STANDARD full automatic #:A.oriental:rem:REFERENCE 2 (bases 1 to 1089) #:A.oriental:rem: AUTHORS Piepersberg,W.M. #:A.oriental:rem: TITLE Direct Submission #:A.oriental:rem: JOURNAL Submitted (13-SEP-1994) to the EMBL/GenBank/DDBJ databases. W.M. #:A.oriental:rem: Piepersberg, Bergische Univ. Gesamthochschule, Wuppertal, Inst. #:A.oriental:rem: fuer Chemische Mikrobiologie, Gaussstr. 20, 42097 Wuppertal, FRG #:A.oriental:rem: STANDARD full automatic #:A.oriental:rem:COMMENT #:A.oriental:rem: NCBI gi: 550304 #:A.oriental:rem:FEATURES Location/Qualifiers #:A.oriental:rem: source 1..1089 #:A.oriental:rem: /organism="Amycolatopsis orientalis" #:A.oriental:rem: /sub_species="lurida" #:A.oriental:rem: /strain="DSM43187" #:A.oriental:rem: rRNA <1..993 #:A.oriental:rem: /product="23S ribosomal RNA" #:A.oriental:rem: primer_bind 1..16 #:A.oriental:rem: rRNA 1067..>1089 #:A.oriental:rem: /product="5S ribosomal RNA" #:A.oriental:rem: primer_bind 1074..1089 #:A.oriental:rem:BASE COUNT 231 a 248 c 351 g 259 t #:A.oriental:rem:ORIGIN #:S.rimosus:name:Streptomyces rimosus #:S.rimosus:subsp: #:S.rimosus:strain: #:S.rimosus:atcc: #:S.rimosus:acs:X62884 #:S.rimosus:auth: #:S.rimosus:title: #:S.rimosus:jour: #:S.rimosus:who: #:S.rimosus:date: #:S.rimosus:rem:ID SRRRNF standard; DNA; PRO; 5507 BP. #:S.rimosus:rem:XX #:S.rimosus:rem:AC X62884; #:S.rimosus:rem:XX #:S.rimosus:rem:DT 30-JUN-1994 (Rel. 40, Created) #:S.rimosus:rem:DT 30-JUN-1994 (Rel. 40, Last updated, Version 2) #:S.rimosus:rem:XX #:S.rimosus:rem:DE S.rimosus rrnF operon for 16S rRNA, 23S rRNA and 5S rRNA #:S.rimosus:rem:XX #:S.rimosus:rem:KW 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; #:S.rimosus:rem:KW rrnf operon. #:S.rimosus:rem:XX #:S.rimosus:rem:OS Streptomyces rimosus #:S.rimosus:rem:OC Prokaryota; Bacteria; Firmicutes; Streptomycetaceae. #:S.rimosus:rem:XX #:S.rimosus:rem:RN [1] #:S.rimosus:rem:RP 1-5507 #:S.rimosus:rem:RA Pujic P.; #:S.rimosus:rem:RT ; #:S.rimosus:rem:RL Submitted (29-OCT-1991) to the EMBL/GenBank/DDBJ databases. #:S.rimosus:rem:RL P. Pujic, Ruder Boskovic Institute, Department of Organic Chemistry #:S.rimosus:rem:RL and Biochemistry, P.O.Box 1016, 41001Zagreb, Republic of Croatia #:S.rimosus:rem:XX #:S.rimosus:rem:RN [2] #:S.rimosus:rem:RP 1-5507 #:S.rimosus:rem:RA Pujic P., Plohl M., Durajlyas S., Gamulin V.; #:S.rimosus:rem:RT "Sequence analysis of rrnF operon from S.rimosus"; #:S.rimosus:rem:RL Unpublished. #:S.rimosus:rem:XX #:S.rimosus:rem:FH Key Location/Qualifiers #:S.rimosus:rem:FH #:S.rimosus:rem:FT source 1..5507 #:S.rimosus:rem:FT /organism="Streptomyces rimosus" #:S.rimosus:rem:FT /strain="R6-554" #:S.rimosus:rem:FT rRNA 130..1658 #:S.rimosus:rem:FT /gene="rrnF" #:S.rimosus:rem:FT /product="16S rRNA" #:S.rimosus:rem:FT rRNA 1957..5077 #:S.rimosus:rem:FT /gene="rrnF" #:S.rimosus:rem:FT /product="23S rRNA" #:S.rimosus:rem:FT rRNA 5150..5269 #:S.rimosus:rem:FT /gene="rrnF" #:S.rimosus:rem:FT /product="5S rRNA" #:S.rimosus:rem:XX #:S.rimosus:rem:SQ Sequence 5507 BP; 1199 A; 1318 C; 1874 G; 1116 T; 0 other; #:S.mashuens:name:Streptomyces mashuensis #:S.mashuens:subsp: #:S.mashuens:strain: #:S.mashuens:atcc: #:S.mashuens:acs:X81578 #:S.mashuens:auth: #:S.mashuens:title: #:S.mashuens:jour: #:S.mashuens:who: #:S.mashuens:date: #:S.mashuens:rem:LOCUS SM23SRNA 1094 bp RNA BCT 26-SEP-1994 #:S.mashuens:rem:DEFINITION S.mashuense 23S rRNA (partial). #:S.mashuens:rem:ACCESSION X81578 #:S.mashuens:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene; 5S ribosomal RNA; 5S rRNA gene. #:S.mashuens:rem:SOURCE Streptoverticillium mashuense. #:S.mashuens:rem: ORGANISM Streptoverticillium mashuense #:S.mashuens:rem: Prokaryota; Bacteria; Firmicutes; Streptomycetaceae. #:S.mashuens:rem:REFERENCE 1 (bases 1 to 1094) #:S.mashuens:rem: AUTHORS Mehling,A., Wehmeier,U.F. and Piepersberg,W. #:S.mashuens:rem: TITLE Use of the 'reverse' sequencing primer for random amplified #:S.mashuens:rem: polymorphic DNA (RAPD) fingerprinting assays of actinomycetes #:S.mashuens:rem: JOURNAL Unpublished #:S.mashuens:rem: STANDARD full automatic #:S.mashuens:rem:REFERENCE 2 (bases 1 to 1094) #:S.mashuens:rem: AUTHORS Piepersberg,W.M. #:S.mashuens:rem: TITLE Direct Submission #:S.mashuens:rem: JOURNAL Submitted (13-SEP-1994) to the EMBL/GenBank/DDBJ databases. W.M. #:S.mashuens:rem: Piepersberg, Bergische Univ. Gesamthochschule, Wuppertal, Inst. #:S.mashuens:rem: fuer Chemische Mikrobiologie, Gaussstr. 20, 42097 Wuppertal, FRG #:S.mashuens:rem: STANDARD full automatic #:S.mashuens:rem:COMMENT #:S.mashuens:rem: NCBI gi: 550431 #:S.mashuens:rem:FEATURES Location/Qualifiers #:S.mashuens:rem: source 1..1094 #:S.mashuens:rem: /organism="Streptoverticillium mashuense" #:S.mashuens:rem: /strain="DSM40221" #:S.mashuens:rem: rRNA <1..993 #:S.mashuens:rem: /product="23S ribosomal RNA" #:S.mashuens:rem: primer_bind 1..16 #:S.mashuens:rem: rRNA 1072..>1094 #:S.mashuens:rem: /product="5S ribosomal RNA" #:S.mashuens:rem: primer_bind 1079..1094 #:S.mashuens:rem:BASE COUNT 234 a 249 c 356 g 255 t #:S.mashuens:rem:ORIGIN #:S.coelicol:auth:Redenbach,M., Kieser,H.M., Denapaite,D., Eichner,A., Cullum,J., #:S.coelicol:title:A set of ordered cosmids and a detailed genetic and physical map #:S.coelicol:name:Streptomyces coelicolor. #:S.coelicol:subsp: #:S.coelicol:strain: #:S.coelicol:atcc: #:S.coelicol:acs:AL031031 #:S.coelicol:auth:Kinashi,H. and Hopwood,D.A. #:S.coelicol:title:for the 8 Mb Streptomyces coelicolor A3(2) chromosome #:S.coelicol:jour:Mol. Microbiol. 21 (1), 77-96 (1996) #:S.coelicol:who: #:S.coelicol:date:06-JUL-1998 #:S.coelicol:rem:ref:1 (bases 1 to 31636) #:S.coelicol:rem:ref:2 (bases 1 to 31636) #:S.coelicol:rem:auth:Harris,D. and Taylor,K. #:S.coelicol:rem:jour:Unpublished #:S.coelicol:rem:ref:3 (bases 1 to 31636) #:S.coelicol:rem:auth:Parkhill,J., Barrell,B.G. and Rajandream,M.A. #:S.coelicol:rem:jour:Submitted (03-JUL-1998) Streptomyces coelicolor sequencing #:S.coelicol:rem:: project, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, #:S.coelicol:rem:: Cambridge CB10 1SA E-mail: barrell@sanger.ac.uk Cosmids #:S.coelicol:rem:: supplied by Prof. David A. Hopwood, [3] John Innes Centre, #:S.coelicol:rem:: Norwich Research Park, Colney, Norwich, Norfolk NR4 7UH, UK #:S.coelicol:rem:title:Direct Submission #:S.coelicol:rem:KEYWORDS:16S rRNA; 23S rRNA; 5S rRNA; ATP dependent DNA helicase; #:S.coelicol:rem:: DNA glycosylase; ftsK homolog; pgsA; #:S.coelicol:rem:: phosphatidylglycerophosphate synthase; rrnE; sensory histidine #:S.coelicol:rem:: kinase; transfer-RNA-Thr; two-component regulator. #:S.coelicol:rem:GenBank ACCESSION:AL0310 1 #:S.coelicol:rem:Notes: #:S.coelicol:rem:Streptomyces coelicolor sequencing at The Sanger Centre is funded #:S.coelicol:rem:by the BBSRC. #:S.coelicol:rem:Details of S. coelicolor sequencing at the Sanger Centre are #:S.coelicol:rem:available on the World Wide Web. #:S.coelicol:rem:(URL; http://www.sanger.ac.uk/Projects/S_coelicolor/) CDS are #:S.coelicol:rem:numbered using the following system eg SC7B7.01c. SC (S. #:S.coelicol:rem:coelicolor), 7B7 (cosmid name), .01 (first CDS), c (complementary #:S.coelicol:rem:strand). #:S.coelicol:rem:The more significant matches with motifs in the PROSITE database #:S.coelicol:rem:are also included but some of these may be fortuitous. The length #:S.coelicol:rem:in codons is given for each CDS. #:S.coelicol:rem:Usually the highest scoring match found by fasta -o is given for #:S.coelicol:rem:CDS which show significant similarity to other CDS in the database #:S.coelicol:rem:. #:S.coelicol:rem:The position of possible ribosome binding site sequences are #:S.coelicol:rem:given #:S.coelicol:rem:where these have been used to deduce the initiation codon. Gene #:S.coelicol:rem:prediction is based on positional base preference in codons using #:S.coelicol:rem:a #:S.coelicol:rem:specially developed Hidden Markov Model (Krogh et al., Nucleic #:S.coelicol:rem:Acids Research, 22(22):4768-4778(1994)) and the FramePlot program #:S.coelicol:rem:of Bibb et al., Gene 30:157-66(1984) as implemented at #:S.coelicol:rem:http://www.nih.go.jp/ #:S.coelicol:rem:jun/cgi-bin/frameplot.pl. CAUTION: We may not have predicted the #:S.coelicol:rem:correct initiation codon. Where possible we choose an initiation #:S.coelicol:rem:codon (atg, gtg, ttg or (att)) which is preceded by an upstream #:S.coelicol:rem:ribosome binding site sequence (optimally 5-13bp before the #:S.coelicol:rem:initiation codon). If this cannot be identified we choose the #:S.coelicol:rem:most #:S.coelicol:rem:upstream initiation codon. #:S.coelicol:rem:IMPORTANT: This sequence MAY NOT be the entire insert of the #:S.coelicol:rem:sequenced clone. It may be shorter because we only sequence #:S.coelicol:rem:overlapping sections once, or longer, because we arrange for a #:S.coelicol:rem:small overlap between neighbouring submissions. Cosmid 7C7 #:S.coelicol:rem:between #:S.coelicol:rem:9A10 and 4H8 on the AseI-B genomic restriction fragment. #:S.ambofaci:name:Streptomyces ambofaciens #:S.ambofaci:subsp: #:S.ambofaci:strain: #:S.ambofaci:atcc: #:S.ambofaci:acs:M27245 #:S.ambofaci:auth:Pernodet,J.-L., Boccard,F., Alegre,M.-T., Gagnat,J. & Guerineau,M #:S.ambofaci:title: #:S.ambofaci:jour: #:S.ambofaci:who:Robin Gutell #:S.ambofaci:date:Mon Aug 14 18:27:50 1989 #:S.livida.1:name: #:S.livida.1:subsp: #:S.livida.1:strain: #:S.livida.1:atcc: #:S.livida.1:acs:U39477 #:S.livida.1:auth: #:S.livida.1:title: #:S.livida.1:jour: #:S.livida.1:who: #:S.livida.1:date: #:S.livida.1:rem:Streptomyces lividans Zarko #:S.livida.2:name:Streptomyces lividans TK21 #:S.livida.2:subsp: #:S.livida.2:strain: #:S.livida.2:atcc: #:S.livida.2:acs:U39477 #:S.livida.2:auth: #:S.livida.2:title: #:S.livida.2:jour: #:S.livida.2:who: #:S.livida.2:date: #:S.livida.2:rem: Malgorzata Zarko-Postawka #:S.livida.2:rem: Streptomyces lividans TK21 #:S.livida.2:rem: October 1995 #:S.livida.2:rem:LOCUS SLU39477 3324 bp DNA BCT 25-NOV-1995 #:S.livida.2:rem:DEFINITION Streptomyces lividans rrnB operon, 23S rRNA gene, complete #:S.livida.2:rem: sequence, and 5S rRNA gene, partial sequence. #:S.livida.2:rem:ACCESSION U39477 #:S.livida.2:rem:KEYWORDS . #:S.livida.2:rem:SOURCE Streptomyces lividans. #:S.livida.2:rem: ORGANISM Streptomyces lividans #:S.livida.2:rem: Eubacteria; Firmicutes; Actinomycetes; Streptomycetes; #:S.livida.2:rem: Streptomycetaceae; Streptomyces. #:S.livida.2:rem:REFERENCE 1 (bases 1 to 3324) #:S.livida.2:rem: AUTHORS Zarko-Postawka,M., Hunderuk,M., Mordarski,M. and #:S.livida.2:rem: Zakrzewska-Czerwinska,J. #:S.livida.2:rem: TITLE Sequence analysis of rrnB operon from Streptomyces lividans TK21 #:S.livida.2:rem: JOURNAL Unpublished #:S.livida.2:rem:REFERENCE 2 (bases 1 to 3324) #:S.livida.2:rem: AUTHORS Zarko-Postawka,M. #:S.livida.2:rem: TITLE Direct Submission #:S.livida.2:rem: JOURNAL Submitted (26-OCT-1995) Malgorzata Zarko-Postawka Microbiology, #:S.livida.2:rem: Institute of Immunology and Experimental Therapy, Czerska 12, #:S.livida.2:rem: Wroclaw 53-114, Poland #:S.livida.2:rem:COMMENT #:S.livida.2:rem: NCBI gi: 1072108 #:S.livida.2:rem:FEATURES Location/Qualifiers #:S.livida.2:rem: source 1..3324 #:S.livida.2:rem: /clone="pURR64" #:S.livida.2:rem: /strain="TK21" #:S.livida.2:rem: /organism="Streptomyces lividans" #:S.livida.2:rem: rRNA 42..3141 #:S.livida.2:rem: /gene="rrnB" #:S.livida.2:rem: /product="23S rRNA" #:S.livida.2:rem: rRNA 3241..>3324 #:S.livida.2:rem: /gene="rrnB" #:S.livida.2:rem: /product="5S rRNA" #:S.livida.2:rem:BASE COUNT 761 a 760 c 1124 g 679 t #:S.livida.2:rem:ORIGIN #:M.luteus:name:Micrococcus luteus #:M.luteus:subsp: #:M.luteus:strain: #:M.luteus:atcc: #:M.luteus:acs:X06484 #:M.luteus:auth:Schleifer,K.H. #:M.luteus:title: #:M.luteus:jour: #:M.luteus:who: #:M.luteus:date: #:M.luteus:rem:LOCUS MLURN23S 3094 bp ds-DNA BCT 15-DEC-1989 #:M.luteus:rem:DEFINITION Micrococcus luteus 23S rRNA gene. #:M.luteus:rem:ACCESSION X06484 #:M.luteus:rem:KEYWORDS 23S ribosomal RNA. #:M.luteus:rem:SOURCE Micrococcus luteus. #:M.luteus:rem: ORGANISM Micrococcus luteus #:M.luteus:rem: Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:M.luteus:rem: Micrococcaceae. #:M.luteus:rem:REFERENCE 1 (bases 1 to 3094) #:M.luteus:rem: AUTHORS Schleifer,K.H. #:M.luteus:rem: JOURNAL Unpublished (1988) see COMMENT for author address #:M.luteus:rem: STANDARD simple automatic #:M.luteus:rem:REFERENCE 2 (bases 1 to 3094) #:M.luteus:rem: AUTHORS Regensburger,A., Ludwig,W., Frank,R., Bloecker,H. and #:M.luteus:rem: Schleifer,K.H. #:M.luteus:rem: TITLE Complete nucleotide sequence of a 23S ribosomal RNA gene from #:M.luteus:rem: Micrococcus luteus #:M.luteus:rem: JOURNAL Nucleic Acids Res. 16, 2344-2344 (1988) #:M.luteus:rem: STANDARD simple automatic #:M.luteus:rem:COMMENT #:M.luteus:rem: [Unpublished (1988) see COMMENT for author address] enum. 1 to #:M.luteus:rem: 3094. #:M.luteus:rem: [Nucleic Acids Res. 16, 2344-2344 (1988)] enum. 1 to 3094.*source: #:M.luteus:rem: strain=dsm 20030 [1 ] Author address Schleifer K. H., #:M.luteus:rem: Lehrstuhl fur Mikrobiologie, Technische Universitat Munchen, #:M.luteus:rem: Arcisstr. 21, D-8000 Munchen 2, Fed Rep of Germany. #:M.luteus:rem: Submitted (26-JAN-1988) on tape to the EMBL data library. #:M.luteus:rem:FEATURES Location/Qualifiers #:M.luteus:rem: rRNA 1..3094 #:M.luteus:rem: /note="23S rRNA" #:M.luteus:rem:BASE COUNT 736 a 704 c 1029 g 625 t #:M.luteus:rem:ORIGIN #:A.utahensi:name:Actinoplanes utahensis #:A.utahensi:subsp: #:A.utahensi:strain: #:A.utahensi:atcc: #:A.utahensi:acs:X81575 #:A.utahensi:auth: #:A.utahensi:title: #:A.utahensi:jour: #:A.utahensi:who: #:A.utahensi:date: #:A.utahensi:rem:LOCUS AU23SRNA 1114 bp RNA BCT 26-SEP-1994 #:A.utahensi:rem:DEFINITION A.utahensis 23S rRNA gene. #:A.utahensi:rem:ACCESSION X81575 #:A.utahensi:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene; 5S ribosomal RNA; 5S rRNA gene. #:A.utahensi:rem:SOURCE Actinoplanes utahensis. #:A.utahensi:rem: ORGANISM Actinoplanes utahensis #:A.utahensi:rem: Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:A.utahensi:rem: Actinomycetes and related organisms; Actinoplanetes. #:A.utahensi:rem:REFERENCE 1 (bases 1 to 1114) #:A.utahensi:rem: AUTHORS Mehling,A., Wehmeier,U.F. and Piepersberg,W. #:A.utahensi:rem: TITLE Use of the 'reverse' sequencing primer for random amplified #:A.utahensi:rem: polymorphic DNA (RAPD) fingerprinting assays of actinomycetes #:A.utahensi:rem: JOURNAL Unpublished #:A.utahensi:rem: STANDARD full automatic #:A.utahensi:rem:REFERENCE 2 (bases 1 to 1114) #:A.utahensi:rem: AUTHORS Piepersberg,W.M. #:A.utahensi:rem: TITLE Direct Submission #:A.utahensi:rem: JOURNAL Submitted (13-SEP-1994) to the EMBL/GenBank/DDBJ databases. W.M. #:A.utahensi:rem: Piepersberg, Bergische Univ. Gesamthochschule, Wuppertal, Inst. #:A.utahensi:rem: fuer Chemische Mikrobiologie, Gaussstr. 20, 42097 Wuppertal, FRG #:A.utahensi:rem: STANDARD full automatic #:A.utahensi:rem:COMMENT #:A.utahensi:rem: NCBI gi: 550307 #:A.utahensi:rem:FEATURES Location/Qualifiers #:A.utahensi:rem: source 1..1114 #:A.utahensi:rem: /organism="Actinoplanes utahensis" #:A.utahensi:rem: /strain="ATCC 31044" #:A.utahensi:rem: rRNA <1..993 #:A.utahensi:rem: /product="23S ribosomal RNA" #:A.utahensi:rem: primer_bind 1..16 #:A.utahensi:rem: rRNA 1092..>1114 #:A.utahensi:rem: /product="5S ribosomal RNA" #:A.utahensi:rem: primer_bind 1099..1114 #:A.utahensi:rem:BASE COUNT 243 a 260 c 349 g 262 t #:A.utahensi:rem:ORIGIN #:P.freudenr:subsp:ITS #:P.freudenr:name:Propionibacterium freudenreichii. #:P.freudenr:subsp:shermanii partial 16S rRNA, 23S rRNA and 5S rRNA genes plus #:P.freudenr:strain: #:P.freudenr:atcc: #:P.freudenr:acs:Y10819 #:P.freudenr:auth:Dasen,G., Smutny,J., Teuber,M. and Meile,L. #:P.freudenr:title: #:P.freudenr:jour:Unpublished #:P.freudenr:who: #:P.freudenr:date:18-SEP-1997 #:P.freudenr:rem:ref:1 (bases 1 to 5116) #:P.freudenr:rem:ref:2 (bases 1 to 5116) #:P.freudenr:rem:auth:Dasen,G. #:P.freudenr:rem:jour:Submitted (27-JAN-1997) G. Dasen, ETH, Institute of Food #:P.freudenr:rem:: Science, Laboratory of Food Microbiology, Schmelzbergstr. 9, #:P.freudenr:rem:: LFO-G24.2, 8092 Zuerich, SWITZERLAND #:P.freudenr:rem:title:Direct Submission #:P.freudenr:rem:ref:3 (bases 1 to 5116) #:P.freudenr:rem:auth:Dasen,G. #:P.freudenr:rem:jour:Submitted (02-JUN-1997) G. Dasen, ETH, Institute of Food #:P.freudenr:rem:: Science, Laboratory of Food Microbiology, Schmelzbergstr. 9, #:P.freudenr:rem:: LFO-G24.2, 8092 Zuerich, SWITZERLAND #:P.freudenr:rem:title:Direct Submission #:P.freudenr:rem:ref:4 (bases 1 to 2137) #:P.freudenr:rem:auth:Dasen,G. #:P.freudenr:rem:jour:Submitted (16-JUL-1997) G. Dasen, ETH, Institute of Food #:P.freudenr:rem:: Science, Laboratory of Food Microbiology, Schmelzbergstr. 9, #:P.freudenr:rem:: LFO-G24.2, 8092 Zuerich, SWITZERLAND #:P.freudenr:rem:title:Direct Submission #:P.freudenr:rem:ref:5 (bases 1 to 5116) #:P.freudenr:rem:auth:Dasen,G. #:P.freudenr:rem:jour:Submitted (18-SEP-1997) G. Dasen, ETH, Institute of Food #:P.freudenr:rem:: Science, Laboratory of Food Microbiology, Schmelzbergstr. 9, #:P.freudenr:rem:: LFO-G24.2, 8092 Zuerich, SWITZERLAND #:P.freudenr:rem:title:Direct Submission #:P.freudenr:rem:KEYWORDS:16S ribosomal RNA; 16S rRNA; 23S ribosomal RNA; 23S #:P.freudenr:rem:: rRNA; 5S ribosomal RNA; 5S rRNA gene; internal transcribed #:P.freudenr:rem:: spacer; ITS. #:P.freudenr:rem:GenBank ACCESSION:Y10819 #:M.avium:name:Mycobacterium avium #:M.avium:subsp: #:M.avium:strain: #:M.avium:atcc: #:M.avium:acs:X74494 #:M.avium:auth: #:M.avium:title: #:M.avium:jour: #:M.avium:who: #:M.avium:date: #:M.avium:rem:ID MA23SRNA standard; DNA; PRO; 3401 BP. #:M.avium:rem:XX #:M.avium:rem:AC X74494; #:M.avium:rem:XX #:M.avium:rem:DT 04-AUG-1994 (Rel. 40, Created) #:M.avium:rem:DT 04-AUG-1994 (Rel. 40, Last updated, Version 2) #:M.avium:rem:XX #:M.avium:rem:DE M.avium 23S ribosomal RNA gene #:M.avium:rem:XX #:M.avium:rem:KW 23S ribosomal RNA. #:M.avium:rem:XX #:M.avium:rem:OS Mycobacterium avium #:M.avium:rem:OC Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:M.avium:rem:OC Actinomycetes and related organisms; Mycobacteriaceae; #:M.avium:rem:OC Mycobacterium. #:M.avium:rem:XX #:M.avium:rem:RN [1] #:M.avium:rem:RP 1-3401 #:M.avium:rem:RA Van der Giessen J.W.B.; #:M.avium:rem:RT ; #:M.avium:rem:RL Submitted (09-AUG-1993) to the EMBL/GenBank/DDBJ databases. #:M.avium:rem:RL J.W.B. Van Der Giessen, Inst of Infectious Diseases & Immunology, #:M.avium:rem:RL Dept of Bacteriology, School of Veterinary Medicine, Yalelaan 1, PO #:M.avium:rem:RL Box 80.165, 3508 TD Utrecht, NETHERLANDS #:M.avium:rem:XX #:M.avium:rem:RN [2] #:M.avium:rem:RP 1-3401 #:M.avium:rem:RA Van der Giessen J.W.B., Haring R., Van der Zeijst B.A.M.; #:M.avium:rem:RT "Comparison of the 23S ribosomal RNA genes and the spacer region #:M.avium:rem:RT between the 16S and 23S rRNA genes of the closely related #:M.avium:rem:RT Mycobacterium avium and Mycobacterium paratuberculosis and the #:M.avium:rem:RT fast-growing Mycobacterium phlei"; #:M.avium:rem:RL Microbiology 140:1103-1108(1994). #:M.avium:rem:XX #:M.avium:rem:FH Key Location/Qualifiers #:M.avium:rem:FH #:M.avium:rem:FT source 1..3401 #:M.avium:rem:FT /organism="Mycobacterium avium" #:M.avium:rem:FT /sub_species="serotype 8" #:M.avium:rem:FT /strain="23435" #:M.avium:rem:FT /clone="MAP1,MAP2,MAP3,MAI" #:M.avium:rem:FT rRNA 1..20 #:M.avium:rem:FT /product="16S rRNA" #:M.avium:rem:FT misc_RNA 21..294 #:M.avium:rem:FT /note="spacer region" #:M.avium:rem:FT rRNA 295..3401 #:M.avium:rem:FT /product="23S rRNA" #:M.avium:rem:XX #:M.avium:rem:SQ Sequence 3401 BP; 811 A; 811 C; 1101 G; 678 T; 0 other; #:M.kansasii:name:Mycobacterium kansas #:M.kansasii:subsp: #:M.kansasii:strain: #:M.kansasii:atcc: #:M.kansasii:acs:Z17212 #:M.kansasii:auth: #:M.kansasii:title: #:M.kansasii:jour: #:M.kansasii:who: #:M.kansasii:date: #:M.kansasii:rem:ID MK23SRRNA standard; DNA; PRO; 3155 BP. #:M.kansasii:rem:XX #:M.kansasii:rem:AC Z17212; #:M.kansasii:rem:XX #:M.kansasii:rem:DT 05-NOV-1992 (Rel. 33, Created) #:M.kansasii:rem:DT 05-NOV-1992 (Rel. 33, Last updated, Version 2) #:M.kansasii:rem:XX #:M.kansasii:rem:DE Mycobacterium kansas for 23S ribosomal RNA. #:M.kansasii:rem:XX #:M.kansasii:rem:KW 23S ribosomal RNA. #:M.kansasii:rem:XX #:M.kansasii:rem:OS Mycobacterium kansasii #:M.kansasii:rem:OC Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:M.kansasii:rem:OC Actinomycetes and related organisms; Mycobacteriaceae; #:M.kansasii:rem:OC Mycobacterium. #:M.kansasii:rem:XX #:M.kansasii:rem:RN [1] #:M.kansasii:rem:RP 1-3155 #:M.kansasii:rem:RA Fleurbaaij G.A., McNally M., Marich J.E.; #:M.kansasii:rem:RT "The Complete Nucleotide Sequence of Mycobacterium kansasii 23S #:M.kansasii:rem:RT Ribosomal DNA."; #:M.kansasii:rem:RL Unpublished. #:M.kansasii:rem:XX #:M.kansasii:rem:RN [2] #:M.kansasii:rem:RP 1-3155 #:M.kansasii:rem:RA Marich J.E.; #:M.kansasii:rem:RT ; #:M.kansasii:rem:RL Submitted (07-OCT-1992) on tape to the EMBL Data Library by: #:M.kansasii:rem:RL Marich J. E., Syngene Inc., 3252 Holiday Court, Suite 101, La #:M.kansasii:rem:RL Jolla, California, USA, 92037 #:M.kansasii:rem:XX #:M.kansasii:rem:CC *source: strain=ATCC 12478; #:M.kansasii:rem:CC *source: clone=pMBI187, 188, 189, 190, 191, 194, 195, 200; #:M.kansasii:rem:XX #:M.kansasii:rem:FH Key Location/Qualifiers #:M.kansasii:rem:FH #:M.kansasii:rem:FT rRNA 30..3137 #:M.kansasii:rem:FT /partial /product= "23S ribosomal RNA" /citation= #:M.kansasii:rem:FT ([1]) #:M.kansasii:rem:XX #:M.kansasii:rem:SQ Sequence 3155 BP; 775 A; 757 C; 1025 G; 598 T; 0 other; #:M.gastri:name:Mycobacterium gastri #:M.gastri:subsp: #:M.gastri:strain: #:M.gastri:atcc: #:M.gastri:acs:Z17211 #:M.gastri:auth: #:M.gastri:title: #:M.gastri:jour: #:M.gastri:who: #:M.gastri:date: #:M.gastri:rem:ID MG23SRRNA standard; DNA; PRO; 1910 BP. #:M.gastri:rem:XX #:M.gastri:rem:AC Z17211; #:M.gastri:rem:XX #:M.gastri:rem:DT 05-NOV-1992 (Rel. 33, Created) #:M.gastri:rem:DT 05-NOV-1992 (Rel. 33, Last updated, Version 2) #:M.gastri:rem:XX #:M.gastri:rem:DE Mycobacterium gastri for 23S ribosomal RNA. #:M.gastri:rem:XX #:M.gastri:rem:KW 23S ribosomal RNA. #:M.gastri:rem:XX #:M.gastri:rem:OS Mycobacterium gastri #:M.gastri:rem:OC Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:M.gastri:rem:OC Actinomycetes and related organisms; Mycobacteriaceae; #:M.gastri:rem:OC Mycobacterium. #:M.gastri:rem:XX #:M.gastri:rem:RN [1] #:M.gastri:rem:RP 1-1909 #:M.gastri:rem:RA Fleurbaaij G.A., McNally M., Marich J.E.; #:M.gastri:rem:RT "The Complete Nucleotide Sequence of Mycobacteria kansassii 23S #:M.gastri:rem:RT ribosomal DNA."; #:M.gastri:rem:RL Unpublished. #:M.gastri:rem:XX #:M.gastri:rem:RN [2] #:M.gastri:rem:RP 1-1910 #:M.gastri:rem:RA Marich J.E.; #:M.gastri:rem:RT ; #:M.gastri:rem:RL Submitted (07-OCT-1992) on tape to the EMBL Data Library by: #:M.gastri:rem:RL Marich J. E., Syngene Inc., 3252 Holiday Court, Suite 101, La #:M.gastri:rem:RL Jolla, California, USA, 92037 #:M.gastri:rem:XX #:M.gastri:rem:CC *source: strain=ATCC 15754; #:M.gastri:rem:CC *source: clone=pMBI211, pMBI212, pMBI213, pMBI214, pMBI198, pMBI199; #:M.gastri:rem:XX #:M.gastri:rem:FH Key Location/Qualifiers #:M.gastri:rem:FH #:M.gastri:rem:FT rRNA 1..3137 #:M.gastri:rem:FT /partial /product= "23S ribosomal RNA" /citation= #:M.gastri:rem:FT ([1]) #:M.gastri:rem:XX #:M.gastri:rem:SQ Sequence 1910 BP; 449 A; 444 C; 654 G; 363 T; 0 other; #:M.gastri:rem:M.gastri tggatagtggttgcgagcatcaaatggatgcgcttgcccgcaggtagcgtgttcttttgt #:M.leprae:name:Mycobacterium leprae #:M.leprae:subsp: #:M.leprae:strain: #:M.leprae:atcc: #:M.leprae:acs:X56657 #:M.leprae:auth: #:M.leprae:title: #:M.leprae:jour: #:M.leprae:who: #:M.leprae:date: #:M.leprae:rem:ID ML5S23S standard; DNA; PRO; 3922 BP. #:M.leprae:rem:XX #:M.leprae:rem:AC X56657; #:M.leprae:rem:XX #:M.leprae:rem:DT 24-MAY-1991 (Rel. 28, Last updated, Version 2) #:M.leprae:rem:DT 24-MAY-1991 (Rel. 28, Created) #:M.leprae:rem:XX #:M.leprae:rem:DE M.leprae 5S rRNA and 23S rRNA genes and 16S rRNA gene, partial cds #:M.leprae:rem:XX #:M.leprae:rem:KW 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; #:M.leprae:rem:KW ribosomal RNA. #:M.leprae:rem:XX #:M.leprae:rem:OS Mycobacterium leprae #:M.leprae:rem:OC Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:M.leprae:rem:OC Actinomycetes and related organisms; Mycobacteriaceae; #:M.leprae:rem:OC Mycobacterium. #:M.leprae:rem:XX #:M.leprae:rem:RN [2] #:M.leprae:rem:RP 1-3922 #:M.leprae:rem:RA Liesack W.C., Sela S., Bercovier H., Pitulle C., Stackebrandt E.; #:M.leprae:rem:RT "Complete nucleotide sequence of the Mycobacterium leprae 23S and #:M.leprae:rem:RT 5S rRNA genes plus flanking regions and their potential in #:M.leprae:rem:RT designing diagnostic oligonucleotide probes"; #:M.leprae:rem:RL FEBS Lett. 281:114-118(1991). #:M.leprae:rem:XX #:M.leprae:rem:RN [3] #:M.leprae:rem:RP 1-3922 #:M.leprae:rem:RA Stackebrandt E.; #:M.leprae:rem:RT ; #:M.leprae:rem:RL Submitted (22-NOV-1990) on tape to the EMBL Data Library by: #:M.leprae:rem:RL Stackebrandt E., Depto. Microbiology, University of Queensland, St. #:M.leprae:rem:RL Lucia, Australia 4067. #:M.leprae:rem:XX #:M.leprae:rem:CC *source: strain=borstel; #:M.leprae:rem:XX #:M.leprae:rem:CC See Acta Leprologica 7:222-225(1989), FEMS Microbiol. Letters #:M.leprae:rem:CC 61:285-290 and X53999 for overlapping sequences #:M.leprae:rem:XX #:M.leprae:rem:FH Key Location/Qualifiers #:M.leprae:rem:FH #:M.leprae:rem:FT rRNA <1..16 #:M.leprae:rem:FT /product="16S ribosomal RNA" /gene="16S rRNA" #:M.leprae:rem:FT rRNA 312..3433 #:M.leprae:rem:FT /gene="23S rRNA" /product="23S ribosomal RNA" #:M.leprae:rem:FT rRNA 3520..3636 #:M.leprae:rem:FT /gene="5S rRNA" /product="5S ribosomal RNA" #:M.leprae:rem:XX #:M.leprae:rem:SQ Sequence 3922 BP; 956 A; 910 C; 1210 G; 846 T; 0 other; #:M.tubercul:auth:,J., Moule,S., Murphy,L., Oliver,S., Osborne,J., Quail,M.A., #:M.tubercul:auth:Rajandream,M.A., Rogers,J., Rutter,S., Seeger,K., Skelton,S., #:M.tubercul:auth:Squares,S., Sqares,R., Sulston,J.E., Taylor,K., Whitehead,S. #:M.tubercul:auth:and Barrell,B.G. #:M.tubercul:auth:Cole,S.T., Brosch,R., Parkhill,J., Garnier,T., Churcher,C., #:M.tubercul:auth:Harris,D., Gordon,S.V., Eiglmeier,K., Gas,S., Barry III,C.E., #:M.tubercul:auth:Tekaia,F., Badcock,K., Basham,D., Brown,D., Chillingworth,T., #:M.tubercul:auth:Connor,R., Davies,R., Devlin,K., Feltwell,T., Gentles,S., #:M.tubercul:title:complete genome sequence #:M.tubercul:name:Mycobacterium tuberculosis. #:M.tubercul:subsp: #:M.tubercul:strain: #:M.tubercul:atcc: #:M.tubercul:acs:Z73902 #:M.tubercul:auth:Hamlin,N., Holroyd,S., Hornsby,T., Jagels,K., Krogh,A., McLean #:M.tubercul:title:Deciphering the biology of Mycobacterium tuberculosis from the #:M.tubercul:jour:Nature 393 (6685), 537-544 (1998) #:M.tubercul:who: #:M.tubercul:date:17-JUN-1998 #:M.tubercul:rem:ref:1 (bases 1 to 32514) #:M.tubercul:rem:ref:2 (bases 1 to 32514) #:M.tubercul:rem:auth:Parkhill,J. #:M.tubercul:rem:jour:Submitted (11-JUN-1998) Submitted on behalf of the #:M.tubercul:rem:: Mycobacterium tuberculosis sequencing and mapping teams, #:M.tubercul:rem:: Sanger Centre, Wellcome Trust Genome Campus, Hinxton, #:M.tubercul:rem:: Cambridge CB10 1SA Unite de Genetique Moleculaire #:M.tubercul:rem:: Bacterienne, Institut Pasteur, 28 rue du Docteur Roux, 75724 #:M.tubercul:rem:: Paris Cedex 15, France E-mail: parkhill@sanger.ac.uk #:M.tubercul:rem:title:Direct Submission #:M.tubercul:rem:KEYWORDS:. #:M.tubercul:rem:GenBank ACCESSION:Z73902 AL1234 6 #:M.tubercul:rem:Notes: #:M.tubercul:rem:Details of M. tuberculosis sequencing at the Sanger Centre are #:M.tubercul:rem:available on the World Wide Web. #:M.tubercul:rem:(URL, http://www.sanger.ac.uk/Projects/M_tuberculosis/) CDS #:M.tubercul:rem:have been renumbered from the original cosmid submissions but the #:M.tubercul:rem:old gene designations are in brackets after the new gene numbers. #:M.tubercul:rem:Gene prediction was based on a Hidden Markov Model of TB genes #:M.tubercul:rem:implemented in TBparse (Krogh) supplemented with visual #:M.tubercul:rem:inspection of positional base preference in codons, especially where there #:M.tubercul:rem:is an increase in the observed/expected third position G + C. #:M.tubercul:rem:CAUTION: In some cases we may not have predicted the correct #:M.tubercul:rem:initiation codon. Where possible we choose an initiation codon #:M.tubercul:rem:(atg, gtg, or ttg) which is preceded by an upstream ribosome #:M.tubercul:rem:binding site sequence (optimally 5-13bp before the initiation #:M.tubercul:rem:codon). If this cannot be identified we choose the most #:M.tubercul:rem:upstream initiation codon. #:M.smegmati:title:Introducing mutations into a chromosomal rRNA gene using a #:M.smegmati:title:genetically modified eubacterial host with a single rRNA #:M.smegmati:name:Mycobacterium smegmatis. #:M.smegmati:subsp: #:M.smegmati:strain: #:M.smegmati:atcc: #:M.smegmati:acs:Y08453 #:M.smegmati:auth:Sander,P., Prammananan,T. and Boettger,E.C. #:M.smegmati:title:operon #:M.smegmati:jour:Unpublished #:M.smegmati:who: #:M.smegmati:date:02-DEC-1996 #:M.smegmati:rem:ref:1 (bases 1 to 6327) #:M.smegmati:rem:ref:2 (bases 1 to 6327) #:M.smegmati:rem:auth:Sander,P. #:M.smegmati:rem:jour:Submitted (30-SEP-1996) P. Sander, Institut fuer #:M.smegmati:rem:: Medizinische Mikrobiologie, Medizinische Hochschule #:M.smegmati:rem:: Hannover, Konstanty-Gutschowstr. 8, D-30623, Hannover, FRG #:M.smegmati:rem:title:Direct Submission #:M.smegmati:rem:KEYWORDS:16S ribosomal RNA; 16S rRNA gene; 23S ribosomal RNA; #:M.smegmati:rem:: 23S rRNA gene; 5S ribosomal RNA; 5S rRNA gene; internal #:M.smegmati:rem:: transcribed spacer 1; internal transcribed spacer 2; ITS1; #:M.smegmati:rem:: ITS2; tyrosyl-tRNA synthetase. #:M.smegmati:rem:GenBank ACCESSION:Y08453 #:M.smegmati:rem:Related sequences: M59263-M59285; X76255-X76258; U09821, #:M.smegmati:rem:U09862, #:M.smegmati:rem:U09863. #:M.phlei:name:Mycobacterium phlei #:M.phlei:subsp: #:M.phlei:strain: #:M.phlei:atcc: #:M.phlei:acs:X74493 #:M.phlei:auth: #:M.phlei:title: #:M.phlei:jour: #:M.phlei:who: #:M.phlei:date: #:M.phlei:rem:ID MP23SRNA standard; DNA; PRO; 3494 BP. #:M.phlei:rem:XX #:M.phlei:rem:AC X74493; #:M.phlei:rem:XX #:M.phlei:rem:DT 04-AUG-1994 (Rel. 40, Created) #:M.phlei:rem:DT 04-AUG-1994 (Rel. 40, Last updated, Version 2) #:M.phlei:rem:XX #:M.phlei:rem:DE M.phlei 23S ribosomal RNA gene #:M.phlei:rem:XX #:M.phlei:rem:KW 23S ribosomal RNA. #:M.phlei:rem:XX #:M.phlei:rem:OS Mycobacterium phlei #:M.phlei:rem:OC Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:M.phlei:rem:OC Actinomycetes and related organisms; Mycobacteriaceae; #:M.phlei:rem:OC Mycobacterium. #:M.phlei:rem:XX #:M.phlei:rem:RN [1] #:M.phlei:rem:RP 1-3494 #:M.phlei:rem:RA Van der Giessen J.W.B.; #:M.phlei:rem:RT ; #:M.phlei:rem:RL Submitted (09-AUG-1993) to the EMBL/GenBank/DDBJ databases. #:M.phlei:rem:RL J.W.B. Van Der Giessen, Inst of Infectious Diseases & Immunology, #:M.phlei:rem:RL Dept of Bacteriology, School of Veterinary Medicine, Yalelaan 1, PO #:M.phlei:rem:RL Box 80.165, 3508 TD Utrecht, NETHERLANDS #:M.phlei:rem:XX #:M.phlei:rem:RN [2] #:M.phlei:rem:RP 1-3494 #:M.phlei:rem:RA Van der Giessen J.W.B., Haring R., Van der Zeijst B.A.M.; #:M.phlei:rem:RT "Comparison of the 23S ribosomal RNA genes and the spacer region #:M.phlei:rem:RT between the 16S and 23S rRNA genes of the closely related #:M.phlei:rem:RT Mycobacterium avium and Mycobacterium paratuberculosis and the #:M.phlei:rem:RT fast-growing Mycobacterium phlei"; #:M.phlei:rem:RL Microbiology 140:1103-1108(1994). #:M.phlei:rem:XX #:M.phlei:rem:FH Key Location/Qualifiers #:M.phlei:rem:FH #:M.phlei:rem:FT source 1..3494 #:M.phlei:rem:FT /organism="Mycobacterium phlei" #:M.phlei:rem:FT /strain="R82" #:M.phlei:rem:FT /clone="MPhP1,MPhP2,MPhP3,MPhI" #:M.phlei:rem:FT rRNA 1..20 #:M.phlei:rem:FT /product="16S rRNA" #:M.phlei:rem:FT misc_RNA 21..379 #:M.phlei:rem:FT /note="spacer region" #:M.phlei:rem:FT rRNA 380..3494 #:M.phlei:rem:FT /product="23S rRNA" #:M.phlei:rem:XX #:M.phlei:rem:SQ Sequence 3494 BP; 783 A; 811 C; 1170 G; 729 T; 1 other; #:M.paratube:name:Mycobacterium paratuberculosis #:M.paratube:subsp: #:M.paratube:strain: #:M.paratube:atcc: #:M.paratube:acs:X74495 #:M.paratube:auth: #:M.paratube:title: #:M.paratube:jour: #:M.paratube:who: #:M.paratube:date: #:M.paratube:rem:ID MPARRNA standard; DNA; PRO; 3401 BP. #:M.paratube:rem:XX #:M.paratube:rem:AC X74495; #:M.paratube:rem:XX #:M.paratube:rem:DT 04-AUG-1994 (Rel. 40, Created) #:M.paratube:rem:DT 04-AUG-1994 (Rel. 40, Last updated, Version 4) #:M.paratube:rem:XX #:M.paratube:rem:DE M.paratuberculosis 23S ribosomal RNA gene #:M.paratube:rem:XX #:M.paratube:rem:KW 23S ribosomal RNA. #:M.paratube:rem:XX #:M.paratube:rem:OS Mycobacterium paratuberculosis #:M.paratube:rem:OC Prokaryota; Bacteria; Firmicutes; Irregular asporogenous rods; #:M.paratube:rem:OC Actinomycetes and related organisms; Mycobacteriaceae; #:M.paratube:rem:OC Mycobacterium. #:M.paratube:rem:XX #:M.paratube:rem:RN [1] #:M.paratube:rem:RP 1-3401 #:M.paratube:rem:RA Van der Giessen J.W.B.; #:M.paratube:rem:RT ; #:M.paratube:rem:RL Submitted (09-AUG-1993) to the EMBL/GenBank/DDBJ databases. #:M.paratube:rem:RL J.W.B. Van Der Giessen, Inst of Infectious Diseases & Immunology, #:M.paratube:rem:RL Dept of Bacteriology, School of Veterinary Medicine, Yalelaan 1, PO #:M.paratube:rem:RL Box 80.165, 3508 TD Utrecht, NETHERLANDS #:M.paratube:rem:XX #:M.paratube:rem:RN [2] #:M.paratube:rem:RP 1-3401 #:M.paratube:rem:RA Van der Giessen J.W.B., Haring R., Van der Zeijst B.A.M.; #:M.paratube:rem:RT "Comparison of the 23S ribosomal RNA genes and the spacer region #:M.paratube:rem:RT between the 16S and 23S rRNA genes of the closely related #:M.paratube:rem:RT Mycobacterium avium and Mycobacterium paratuberculosis and the #:M.paratube:rem:RT fast-growing Mycobacterium phlei"; #:M.paratube:rem:RL Microbiology 140:1103-1108(1994). #:M.paratube:rem:XX #:M.paratube:rem:FH Key Location/Qualifiers #:M.paratube:rem:FH #:M.paratube:rem:FT source 1..3401 #:M.paratube:rem:FT /organism="Mycobacterium paratuberculosis" #:M.paratube:rem:FT /strain="J2A" #:M.paratube:rem:FT /clone="MPP1, MPP2, MPP3, MPI" #:M.paratube:rem:FT rRNA 1..20 #:M.paratube:rem:FT /product="16S rRNA" #:M.paratube:rem:FT misc_RNA 21..294 #:M.paratube:rem:FT /note="spacer region" #:M.paratube:rem:FT rRNA 295..3401 #:M.paratube:rem:FT /product="23S rRNA" #:M.paratube:rem:XX #:M.paratube:rem:SQ Sequence 3401 BP; 812 A; 810 C; 1098 G; 681 T; 0 other; #:R.erythrop:title:Nucleotide Sequence Analysis of a Ribosomal RNA Gene Cluster #:R.erythrop:name:Rhodococcus erythropolis. #:R.erythrop:subsp: #:R.erythrop:strain: #:R.erythrop:atcc: #:R.erythrop:acs:AF001265 #:R.erythrop:auth:Setterquist,R.A., Montgomery,J.P., Gutell,R.R. and Fox,G.E. #:R.erythrop:title:from Rhodococcus sp. IGTS8 #:R.erythrop:jour:Unpublished #:R.erythrop:who: #:R.erythrop:date:03-JUN-1997 #:R.erythrop:rem:ref:1 AF001265 (bases 1 to 6324) #:R.erythrop:rem:ref:2 (bases 1 to 6324) #:R.erythrop:rem:auth:Setterquist,R.A. and Fox,G.E. #:R.erythrop:rem:jour:Submitted (24-APR-1997) Biochemical and Biophysical Sc., #:R.erythrop:rem:: University of Houston, 4800 Calhoun, Houston, TX 77204-5934, #:R.erythrop:rem:: USA #:R.erythrop:rem:title:Direct Submission #:R.erythrop:rem:KEYWORDS:. #:R.erythrop:rem:GenBank ACCESSION:AF0012 5 #:R.fascians:name:Rhodococcus fascians. #:R.fascians:subsp: #:R.fascians:strain: #:R.fascians:atcc: #:R.fascians:acs:Y11196 #:R.fascians:auth:Pisabarro,A., Correia,A. and Martin,J.F. #:R.fascians:title: #:R.fascians:jour:Unpublished #:R.fascians:who: #:R.fascians:date:15-JUN-1997 #:R.fascians:rem:ref:1 (bases 1 to 6005) #:R.fascians:rem:ref:2 (bases 1 to 6005) #:R.fascians:rem:auth:Pisabarro,A. #:R.fascians:rem:jour:Submitted (12-FEB-1997) A. Pisabarro, Universidad de #:R.fascians:rem:: Leon. F. Biologia, Area de Microbiologia, Campus de #:R.fascians:rem:: Vegazana, Leon E-24071, SPAIN #:R.fascians:rem:title:Direct Submission #:R.fascians:rem:KEYWORDS:16S ribosomal RNA; 16S rRNA; 23S ribosomal RNA; 23S #:R.fascians:rem:: rRNA; 5S ribosomal RNA; 5S rRNA. #:R.fascians:rem:GenBank ACCESSION:Y11196 #:D.thermoph:auth:Ludwig,W., Strunk,O., Klugbauer,S., Klugbauer,N., Weizenegger #:D.thermoph:name:Dictyoglomus thermophilum. #:D.thermoph:subsp: #:D.thermoph:strain: #:D.thermoph:atcc: #:D.thermoph:acs:Y15791 #:D.thermoph:auth:,M., Neumaier,J., Bachleitner,M. and Schleifer,K.H. #:D.thermoph:title:Bacterial phylogeny based on comparative sequence analysis #:D.thermoph:jour:Electrophoresis In press #:D.thermoph:who: #:D.thermoph:date:11-DEC-1997 #:D.thermoph:rem:ref:1 (bases 1 to 3244) #:D.thermoph:rem:ref:2 (bases 1 to 3244) #:D.thermoph:rem:auth:Ludwig,W. #:D.thermoph:rem:jour:Submitted (04-DEC-1997) W. Ludwig, Lehrstuhl fuer #:D.thermoph:rem:: Mikrobiologie, Technische Universitaet Muenchen, Muenchen, #:D.thermoph:rem:: FRG #:D.thermoph:rem:title:Direct Submission #:D.thermoph:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:D.thermoph:rem:GenBank ACCESSION:Y15791 #:P.frisinge:name:Pectinatus frisingensis #:P.frisinge:subsp: #:P.frisinge:strain: #:P.frisinge:atcc: #:P.frisinge:acs:X68423 #:P.frisinge:auth: #:P.frisinge:title: #:P.frisinge:jour: #:P.frisinge:who: #:P.frisinge:date: #:P.frisinge:rem:ID PF23SRRN standard; DNA; PRO; 2924 BP. #:P.frisinge:rem:XX #:P.frisinge:rem:AC X68423; #:P.frisinge:rem:XX #:P.frisinge:rem:DT 29-MAR-1993 (Rel. 35, Created) #:P.frisinge:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:P.frisinge:rem:XX #:P.frisinge:rem:DE P.frisingensis gene for 23S rRNA #:P.frisinge:rem:XX #:P.frisinge:rem:KW 23S ribosomal RNA. #:P.frisinge:rem:XX #:P.frisinge:rem:OS Pectinatus frisingensis #:P.frisinge:rem:OC Prokaryota; Bacteria; Gracilicutes; Scotobacteria; #:P.frisinge:rem:OC Anaerobic gram-negative straight, curved and helical rods; #:P.frisinge:rem:OC Bacteroidaceae. #:P.frisinge:rem:XX #:P.frisinge:rem:RN [1] #:P.frisinge:rem:RP 1-2924 #:P.frisinge:rem:RA Ludwig W.; #:P.frisinge:rem:RT ; #:P.frisinge:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:P.frisinge:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:P.frisinge:rem:RL 8000 Muenchen 2, FRG #:P.frisinge:rem:XX #:P.frisinge:rem:RN [2] #:P.frisinge:rem:RP 1-2924 #:P.frisinge:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:P.frisinge:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:P.frisinge:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:P.frisinge:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:P.frisinge:rem:RT with a low DNA G+C content"; #:P.frisinge:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:P.frisinge:rem:XX #:P.frisinge:rem:CC *source: strain=DSM 20465; #:P.frisinge:rem:XX #:P.frisinge:rem:FH Key Location/Qualifiers #:P.frisinge:rem:FH #:P.frisinge:rem:FT rRNA 1..2924 #:P.frisinge:rem:FT /product="23S ribosomal RNA" #:P.frisinge:rem:XX #:P.frisinge:rem:SQ Sequence 2924 BP; 873 A; 635 C; 907 G; 509 T; 0 other; #:P.niger:name:Peptococcus niger #:P.niger:subsp: #:P.niger:strain: #:P.niger:atcc: #:P.niger:acs:X68428 #:P.niger:auth: #:P.niger:title: #:P.niger:jour: #:P.niger:who: #:P.niger:date: #:P.niger:rem:ID PN23SRRN standard; DNA; PRO; 2900 BP. #:P.niger:rem:XX #:P.niger:rem:AC X68428; #:P.niger:rem:XX #:P.niger:rem:DT 29-MAR-1993 (Rel. 35, Created) #:P.niger:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:P.niger:rem:XX #:P.niger:rem:DE P.niger gene for 23S rRNA #:P.niger:rem:XX #:P.niger:rem:KW 23S ribosomal RNA. #:P.niger:rem:XX #:P.niger:rem:OS Peptococcus niger #:P.niger:rem:OC Prokaryota; Bacteria. #:P.niger:rem:XX #:P.niger:rem:RN [1] #:P.niger:rem:RP 1-2900 #:P.niger:rem:RA Ludwig W.; #:P.niger:rem:RT ; #:P.niger:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:P.niger:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:P.niger:rem:RL 8000 Muenchen 2, FRG #:P.niger:rem:XX #:P.niger:rem:RN [2] #:P.niger:rem:RP 1-2900 #:P.niger:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:P.niger:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:P.niger:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:P.niger:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:P.niger:rem:RT with a low DNA G+C content"; #:P.niger:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:P.niger:rem:XX #:P.niger:rem:CC *source: strain=DSM 20475; #:P.niger:rem:XX #:P.niger:rem:FH Key Location/Qualifiers #:P.niger:rem:FH #:P.niger:rem:FT rRNA 1..2900 #:P.niger:rem:FT /product="23S ribosomal RNA" #:P.niger:rem:XX #:P.niger:rem:SQ Sequence 2900 BP; 856 A; 650 C; 853 G; 541 T; 0 other; #:GRAM+.LAC:name: #:GRAM+.LAC:subsp: #:GRAM+.LAC:strain: #:GRAM+.LAC:atcc: #:GRAM+.LAC:acs:DIVIDER #:GRAM+.LAC:auth: #:GRAM+.LAC:title: #:GRAM+.LAC:jour: #:GRAM+.LAC:who:Robin Gutell,MCDB-256,28595,7868901 #:GRAM+.LAC:date:Fri Dec 17 18:04:18 1993 #:B.sp.PS3:name:Bacillus sp. #:B.sp.PS3:subsp: #:B.sp.PS3:strain: #:B.sp.PS3:atcc: #:B.sp.PS3:acs:X60981 #:B.sp.PS3:auth: #:B.sp.PS3:title: #:B.sp.PS3:jour: #:B.sp.PS3:who: #:B.sp.PS3:date: #:B.sp.PS3:rem:LOCUS BACTRN 4050 bp ds-DNA BCT 13-AUG-1991 #:B.sp.PS3:rem:DEFINITION Bacillus sp. strain PS3 genes for tRNA-Asn, tRNA-Ser, tRNA-Glu, #:B.sp.PS3:rem: tRNA-Val, tRNA-Met and tRNA-Asp. #:B.sp.PS3:rem:ACCESSION X60981 #:B.sp.PS3:rem:KEYWORDS tRNA-Asn; tRNA-Asp; tRNA-Glu; tRNA-Met; tRNA-Ser; tRNA-Val; #:B.sp.PS3:rem: transfer RNA. #:B.sp.PS3:rem:SOURCE Bacillus sp. DNA. #:B.sp.PS3:rem: ORGANISM Bacillus sp. #:B.sp.PS3:rem: Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:B.sp.PS3:rem: Bacillaceae. #:B.sp.PS3:rem:REFERENCE 1 (bases 1 to 4050) #:B.sp.PS3:rem: AUTHORS Fink,P.S., Zhao,Y., Prochaska,L.J. and Leffak,M. #:B.sp.PS3:rem: TITLE Structural RNA genes from the thermophilic Bacillus SP. strain PS3 #:B.sp.PS3:rem: JOURNAL Unpublished (1991) #:B.sp.PS3:rem: STANDARD full automatic #:B.sp.PS3:rem:COMMENT *source: strain=PS3; #:B.sp.PS3:rem: From EMBL entry BSTRN; dated 02-AUG-1991. #:B.sp.PS3:rem:FEATURES Location/Qualifiers #:B.sp.PS3:rem: rRNA 75..2988 #:B.sp.PS3:rem: tRNA 3182..3256 #:B.sp.PS3:rem: /anticodon=(pos:3214..3216,aa:asn) #:B.sp.PS3:rem: /gene="tRNA-Asn" #:B.sp.PS3:rem: tRNA 3261..3351 #:B.sp.PS3:rem: /anticodon=(pos:3295..3297,aa:ser) #:B.sp.PS3:rem: /gene="tRNA-Ser" #:B.sp.PS3:rem: tRNA 3366..3436 #:B.sp.PS3:rem: /anticodon=(pos:3399..3401,aa:glu) #:B.sp.PS3:rem: /gene="tRNA-Glu" #:B.sp.PS3:rem: tRNA 3446..3521 #:B.sp.PS3:rem: /anticodon=(pos:3479..3481,aa:val) #:B.sp.PS3:rem: /gene="tRNa-Val" #:B.sp.PS3:rem: tRNA 3816..3892 #:B.sp.PS3:rem: /anticodon=(pos:3850..3852,aa:met) #:B.sp.PS3:rem: /gene="tRNA-Met" #:B.sp.PS3:rem: tRNA 3898..3972 #:B.sp.PS3:rem: /anticodon=(pos:3931..3933,aa:asp) #:B.sp.PS3:rem: /gene="tRNA-Asp" #:B.sp.PS3:rem:BASE COUNT 1023 a 968 c 1287 g 772 t #:B.sp.PS3:rem:ORIGIN #:B.alcaloph:name:Bacillus alcalophilus #:B.alcaloph:subsp: #:B.alcaloph:strain: #:B.alcaloph:atcc: #:B.alcaloph:acs:D11459 #:B.alcaloph:auth: #:B.alcaloph:title: #:B.alcaloph:jour: #:B.alcaloph:who: #:B.alcaloph:date: #:B.alcaloph:rem:ID BAC23SRR unannotated; RNA; PRO; 2930 BP. #:B.alcaloph:rem:XX #:B.alcaloph:rem:AC D11459; #:B.alcaloph:rem:XX #:B.alcaloph:rem:DT 13-JUL-1992 (Rel. 32, Created) #:B.alcaloph:rem:DT 13-JUL-1992 (Rel. 32, Last updated, Version 1) #:B.alcaloph:rem:XX #:B.alcaloph:rem:DE B. alcalophilus 23S ribosomal RNA, partial sequence. #:B.alcaloph:rem:XX #:B.alcaloph:rem:KW 23S ribosomal RNA; 23S rRNA. #:B.alcaloph:rem:XX #:B.alcaloph:rem:OS Bacillus alcalophilus #:B.alcaloph:rem:OC Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:B.alcaloph:rem:OC Bacillaceae; Bacillus. #:B.alcaloph:rem:XX #:B.alcaloph:rem:RN [1] #:B.alcaloph:rem:RP 1-2930 #:B.alcaloph:rem:RA Sutherland K.J., Kudo T., Horikoshi K.; #:B.alcaloph:rem:RT ; #:B.alcaloph:rem:RL Unpublished. #:B.alcaloph:rem:XX #:B.alcaloph:rem:CC These data kindly submitted in computer readable form by: Toshiaki #:B.alcaloph:rem:CC Kudo Riken Institute, Microbiology 2-1 Hirosawa, Wako Saitama #:B.alcaloph:rem:CC 351-01 Japan Phone: 0484-62-1111 x3443 Email: #:B.alcaloph:rem:CC tkudo@rkna50.riken.go.jp Fax: 0484-62-4672 #:B.alcaloph:rem:XX #:B.alcaloph:rem:FH Key Location/Qualifiers #:B.alcaloph:rem:FH #:B.alcaloph:rem:XX #:B.alcaloph:rem:SQ Sequence 2930 BP; 800 A; 655 C; 899 G; 576 T; 0 other; #:B.stearo.1:name:Bacillus stearothermophilus #:B.stearo.1:subsp: #:B.stearo.1:strain: #:B.stearo.1:atcc:? #:B.stearo.1:acs:K02663 #:B.stearo.1:auth: #:B.stearo.1:title: #:B.stearo.1:jour:B.stearothermoph:who:published #:B.stearo.1:who:published #:B.stearo.1:date:May 2, 1984 #:B.stearo.1:rem:Phylo:Eubacteria,GM+,lowGC,Bacillus #:B.stearo.2:name:Bacillus stearothermophilus #:B.stearo.2:subsp: #:B.stearo.2:strain: #:B.stearo.2:atcc: #:B.stearo.2:acs:S43424 #:B.stearo.2:auth: #:B.stearo.2:title: #:B.stearo.2:jour: #:B.stearo.2:who: #:B.stearo.2:date: #:B.stearo.2:rem:LOCUS S113017 2928 bp DNA NLM 04-NOV-1992 #:B.stearo.2:rem:DEFINITION 23S ribosomal RNA [Bacillus stearothermophilus, NCDO 1768, Genomic, #:B.stearo.2:rem: 2928 nt] #:B.stearo.2:rem:ACCESSION S43424 #:B.stearo.2:rem:KEYWORDS . #:B.stearo.2:rem:SOURCE Bacillus stearothermophilus NCDO 1768 #:B.stearo.2:rem: ORGANISM Bacillus stearothermophilus #:B.stearo.2:rem: Unclassified. #:B.stearo.2:rem:REFERENCE 1 (bases 1 to 2928) #:B.stearo.2:rem: AUTHORS Ash,C. and Collins,M.D. #:B.stearo.2:rem: TITLE Comparative analysis of 23S ribosomal RNA gene sequences of #:B.stearo.2:rem: Bacillus anthracis and emetic Bacillus cereus determined by #:B.stearo.2:rem: PCR-direct sequencing. #:B.stearo.2:rem: JOURNAL FEMS Microbiol. Lett. 73, 75-80 (1992) #:B.stearo.2:rem: STANDARD full automatic #:B.stearo.2:rem:COMMENT #:B.stearo.2:rem: This entry incorporates information provided by the National #:B.stearo.2:rem: Library of Medicine's GenInfo Backbone as NCBI gibbsq 113017. #:B.stearo.2:rem: This sequence comes from Fig. 2. #:B.stearo.2:rem:FEATURES Location/Qualifiers #:B.stearo.2:rem: rRNA 1..2928 #:B.stearo.2:rem: /note="Description: 23S ribosomal RNA" #:B.stearo.2:rem:BASE COUNT 737 a 700 c 987 g 504 t #:B.stearo.2:rem:ORIGIN #:B.lichenif:name:Bacillus licheniformis #:B.lichenif:subsp: #:B.lichenif:strain: #:B.lichenif:atcc: #:B.lichenif:acs:X68433 #:B.lichenif:auth: #:B.lichenif:title: #:B.lichenif:jour: #:B.lichenif:who: #:B.lichenif:date: #:B.lichenif:rem:ID BL23SRNA standard; DNA; PRO; 2932 BP. #:B.lichenif:rem:XX #:B.lichenif:rem:AC X68433; #:B.lichenif:rem:XX #:B.lichenif:rem:DT 29-MAR-1993 (Rel. 35, Created) #:B.lichenif:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:B.lichenif:rem:XX #:B.lichenif:rem:DE B.licheniformis gene for 23S rRNA #:B.lichenif:rem:XX #:B.lichenif:rem:KW 23S ribosomal RNA. #:B.lichenif:rem:XX #:B.lichenif:rem:OS Bacillus licheniformis #:B.lichenif:rem:OC Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:B.lichenif:rem:OC Bacillaceae; Bacillus. #:B.lichenif:rem:XX #:B.lichenif:rem:RN [1] #:B.lichenif:rem:RP 1-2932 #:B.lichenif:rem:RA Ludwig W.; #:B.lichenif:rem:RT ; #:B.lichenif:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:B.lichenif:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:B.lichenif:rem:RL 8000 Muenchen 2, FRG #:B.lichenif:rem:XX #:B.lichenif:rem:RN [3] #:B.lichenif:rem:RP 1-2932 #:B.lichenif:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:B.lichenif:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:B.lichenif:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:B.lichenif:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:B.lichenif:rem:RT with a low DNA G+C content"; #:B.lichenif:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:B.lichenif:rem:XX #:B.lichenif:rem:CC *source: strain=DSM 13; #:B.lichenif:rem:XX #:B.lichenif:rem:FH Key Location/Qualifiers #:B.lichenif:rem:FH #:B.lichenif:rem:FT rRNA 1..2932 #:B.lichenif:rem:FT /gene="23S rRNA" #:B.lichenif:rem:XX #:B.lichenif:rem:SQ Sequence 2932 BP; 784 A; 657 C; 918 G; 573 T; 0 other; #:S.epidermi:name:Staphylococcus epidermidis #:S.epidermi:subsp: #:S.epidermi:strain: #:S.epidermi:atcc: #:S.epidermi:acs:Y15751 #:S.epidermi:auth: #:S.epidermi:title: #:S.epidermi:jour: #:S.epidermi:who: #:S.epidermi:date: #:S.epidermi:rem:LOCUS SEY15751 907 bp RNA BCT 08-DEC-1997 #:S.epidermi:rem:DEFINITION Staphylococcus epidermidis 23S rRNA gene, strain DSM 20044 T. #:S.epidermi:rem:ACCESSION Y15751 #:S.epidermi:rem:NID g2673874 #:S.epidermi:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene. #:S.epidermi:rem:SOURCE Staphylococcus epidermidis. #:S.epidermi:rem: ORGANISM Staphylococcus epidermidis #:S.epidermi:rem: Eubacteria; Firmicutes; Low G+C gram-positive bacteria; #:S.epidermi:rem: Bacillaceae; Staphylococcus. #:S.epidermi:rem:REFERENCE 1 (bases 1 to 907) #:S.epidermi:rem: AUTHORS Probst,A.J., Hertel,C., Richter,L., Wassill,L., Ludwig,W. and #:S.epidermi:rem: Hammes,W.P. #:S.epidermi:rem: TITLE Description of Staphylococcus condimenti sp. nov., a new species #:S.epidermi:rem: isolated from soy sauce mash. Description of Staphylococcus #:S.epidermi:rem: carnosus subsp. utilis subsp. nov., a new subspecies of #:S.epidermi:rem: Staphylococcus carnosus Schleifer and Fischer 1982 #:S.epidermi:rem: JOURNAL Unpublished #:S.epidermi:rem:REFERENCE 2 (bases 1 to 907) #:S.epidermi:rem: AUTHORS Ludwig,W. #:S.epidermi:rem: TITLE Direct Submission #:S.epidermi:rem: JOURNAL Submitted (01-DEC-1997) W. Ludwig, Lehrstuhl fuer Mikrobiologie, #:S.epidermi:rem: Technische Universitaet Muenchen, Munich, FRG #:S.epidermi:rem:FEATURES Location/Qualifiers #:S.epidermi:rem: source 1..907 #:S.epidermi:rem: /organism="Staphylococcus epidermidis" #:S.epidermi:rem: /strain="DSM 20044 T" #:S.epidermi:rem: /db_xref="taxon:1282" #:S.epidermi:rem: rRNA 1..907 #:S.epidermi:rem: /gene="23S rRNA" #:S.epidermi:rem: /product="23S ribosomal RNA" #:S.epidermi:rem: gene 1..907 #:S.epidermi:rem: /gene="23S rRNA" #:S.epidermi:rem:BASE COUNT 247 a 186 c 277 g 197 t #:S.epidermi:rem:ORIGIN #:S.aureus.1:name:Staphylococcus aureus #:S.aureus.1:subsp: #:S.aureus.1:strain: #:S.aureus.1:atcc: #:S.aureus.1:acs:X68425 #:S.aureus.1:auth: #:S.aureus.1:title: #:S.aureus.1:jour: #:S.aureus.1:who: #:S.aureus.1:date: #:S.aureus.1:rem:ID SA23SRRN standard; DNA; PRO; 2923 BP. #:S.aureus.1:rem:XX #:S.aureus.1:rem:AC X68425; #:S.aureus.1:rem:XX #:S.aureus.1:rem:DT 29-MAR-1993 (Rel. 35, Created) #:S.aureus.1:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:S.aureus.1:rem:XX #:S.aureus.1:rem:DE S.aureus gene for 23S rRNA #:S.aureus.1:rem:XX #:S.aureus.1:rem:KW 23S ribosomal RNA. #:S.aureus.1:rem:XX #:S.aureus.1:rem:OS Staphylococcus aureus #:S.aureus.1:rem:OC Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:S.aureus.1:rem:OC Micrococcaceae. #:S.aureus.1:rem:XX #:S.aureus.1:rem:RN [1] #:S.aureus.1:rem:RP 1-2923 #:S.aureus.1:rem:RA Ludwig W.; #:S.aureus.1:rem:RT ; #:S.aureus.1:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:S.aureus.1:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:S.aureus.1:rem:RL 8000 Muenchen 2, FRG #:S.aureus.1:rem:XX #:S.aureus.1:rem:RN [2] #:S.aureus.1:rem:RP 1-2923 #:S.aureus.1:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:S.aureus.1:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:S.aureus.1:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:S.aureus.1:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:S.aureus.1:rem:RT with a low DNA G+C content"; #:S.aureus.1:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:S.aureus.1:rem:XX #:S.aureus.1:rem:CC *source: strain=ATCC 12600; #:S.aureus.1:rem:XX #:S.aureus.1:rem:FH Key Location/Qualifiers #:S.aureus.1:rem:FH #:S.aureus.1:rem:FT rRNA 1..2923 #:S.aureus.1:rem:FT /product="23S ribosomal RNA" #:S.aureus.1:rem:XX #:S.aureus.1:rem:SQ Sequence 2923 BP; 808 A; 597 C; 865 G; 653 T; 0 other; #:S.aureus.2:name:Staphylococcus aureus #:S.aureus.2:subsp:rrnA gene #:S.aureus.2:strain: #:S.aureus.2:atcc: #:S.aureus.2:acs:D12572; D01220 #:S.aureus.2:auth: #:S.aureus.2:title: #:S.aureus.2:jour: #:S.aureus.2:who: #:S.aureus.2:date: #:S.aureus.2:rem:ID SA23SRNA standard; DNA; PRO; 669 BP. #:S.aureus.2:rem:XX #:S.aureus.2:rem:AC D12572; D01220; #:S.aureus.2:rem:XX #:S.aureus.2:rem:DT 06-SEP-1992 (Rel. 33, Created) #:S.aureus.2:rem:DT 06-SEP-1992 (Rel. 33, Last updated, Version 1) #:S.aureus.2:rem:XX #:S.aureus.2:rem:DE Staphylococcus aureus rrnA gene for 23S ribosomal RNA. #:S.aureus.2:rem:XX #:S.aureus.2:rem:KW 23S rRNA. #:S.aureus.2:rem:XX #:S.aureus.2:rem:OS Staphylococcus aureus #:S.aureus.2:rem:OC Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:S.aureus.2:rem:OC Micrococcaceae. #:S.aureus.2:rem:XX #:S.aureus.2:rem:RN [1] #:S.aureus.2:rem:RP 1-669 #:S.aureus.2:rem:RA Hiramatsu K., Yokota T.; #:S.aureus.2:rem:RT ; #:S.aureus.2:rem:RL Unpublished. #:S.aureus.2:rem:XX #:S.aureus.2:rem:CC Submmitted (23-Oct-1991) to DDBJ by: Keiichi Hiramatsu Department #:S.aureus.2:rem:CC of Bacteriology Juntendo University 2-1-1 Hongo Bunkyo-ku Tokyo #:S.aureus.2:rem:CC Japan Phone: 03-3813-3111 x3529 Fax: 03-3814-9300 #:S.aureus.2:rem:XX #:S.aureus.2:rem:FH Key Location/Qualifiers #:S.aureus.2:rem:FH #:S.aureus.2:rem:FT rRNA <1..>669 #:S.aureus.2:rem:FT /product="23S rRNA" /gene="rrnA" #:S.aureus.2:rem:XX #:S.aureus.2:rem:SQ Sequence 669 BP; 191 A; 124 C; 196 G; 158 T; 0 other; #:S.aureus.3:name:Staphylococcus aureus #:S.aureus.3:subsp: #:S.aureus.3:strain: #:S.aureus.3:atcc: #:S.aureus.3:acs:L36472 #:S.aureus.3:auth: #:S.aureus.3:title: #:S.aureus.3:jour: #:S.aureus.3:who: #:S.aureus.3:date: #:S.aureus.3:rem:LOCUS STA5SRR 13214 bp ds-DNA BCT 09-NOV-1994 #:S.aureus.3:rem:DEFINITION Staphylococcus aureus lysyl-tRNA sythetase gene, complete cds, #:S.aureus.3:rem: transfer RNA (tRNA) genes, 5S ribosomal RNA (5S rRNA) gene, 16S #:S.aureus.3:rem: ribosomal RNA (16S rRNA) gene, 23S ribosomal RNA (23S rRNA) gene. #:S.aureus.3:rem:ACCESSION L36472 #:S.aureus.3:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; #:S.aureus.3:rem: lysyl-tRNA synthetase; transfer RNA-Ala; transfer RNA-Arg; #:S.aureus.3:rem: transfer RNA-Gly; transfer RNA-Ile; transfer RNA-Leu; #:S.aureus.3:rem: transfer RNA-Lys; transfer RNA-Pro; transfer RNA-Thr; #:S.aureus.3:rem: transfer RNA-Val. #:S.aureus.3:rem:SOURCE Staphylococcus aureus (clone library: ATCC 12600) DNA. #:S.aureus.3:rem: ORGANISM Staphylococcus aureus #:S.aureus.3:rem: Prokaryotae; Firmicutes; Firmibacteria; Gram-positive cocci; #:S.aureus.3:rem: Micrococcaceae. #:S.aureus.3:rem:REFERENCE 1 (bases 1 to 13214) #:S.aureus.3:rem: AUTHORS Green,C.J. and Vold,B.S. #:S.aureus.3:rem: TITLE An unusual rRNA-tRNA gene organization in Staphylococcus aureus #:S.aureus.3:rem: JOURNAL Unpublished (1994) #:S.aureus.3:rem: STANDARD full automatic #:S.aureus.3:rem:COMMENT #:S.aureus.3:rem: NCBI gi: 567883 #:S.aureus.3:rem:FEATURES Location/Qualifiers #:S.aureus.3:rem: source 1..13214 #:S.aureus.3:rem: /organism="Staphylococcus aureus" #:S.aureus.3:rem: /sequenced_mol="DNA" #:S.aureus.3:rem: /clone_lib="ATCC 12600" #:S.aureus.3:rem: CDS 176..1663 #:S.aureus.3:rem: /note="NCBI gi: 567884" #:S.aureus.3:rem: /codon_start=1 #:S.aureus.3:rem: /product="lysyl-tRNA synthetase" #:S.aureus.3:rem: /translation="MSEEMNDQMLVRRQKLQELYDLGIDPFGSKFDRSGLSSDLKEEW #:S.aureus.3:rem: DQYSKEELVEKEADSHVAIAGRLMTKRGKGKAGFAHVQDLAGQIQIYVRKDQVGDDEF #:S.aureus.3:rem: DLWKNADLGDIVGVEGVMFKTNTGELSVKAKKFTLLTKSLRPLPDKFHGLQDIEQRYR #:S.aureus.3:rem: QRYLDLITNEDSTRTFINRSKIIQEMRNYLNNKGFLEVETPMMHQIAGGAAARPFVTH #:S.aureus.3:rem: HNALDATLYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAY #:S.aureus.3:rem: ADYHDIMDLTESMVRHIANEVLGSAKVQYNGETIDLESAWTRLHIVDAVKEATGVDFY #:S.aureus.3:rem: EVKSDEERKALAKEHGIEIKDTMKYGHILNEFFEQKVEETLIQPTFIYGHPTEISPLA #:S.aureus.3:rem: KKNPEDPRFTDRFELFIVGREHANRFTELNDPIDQKGRFEAQLVEKAQGNDEAHEMDE #:S.aureus.3:rem: DYIEALEYGMPPTGGLGIGIDRLVMLLTDSPSIRDVLLFPYMRQK" #:S.aureus.3:rem: rRNA 2221..2335 #:S.aureus.3:rem: /gene="5S rRNA" #:S.aureus.3:rem: /product="5S ribosomal RNA" #:S.aureus.3:rem: tRNA 2348..2423 #:S.aureus.3:rem: /gene="tRNA-Val" #:S.aureus.3:rem: /anticodon=(pos:2381..2383,aa:Val) #:S.aureus.3:rem: /product="transfer RNA-Val" #:S.aureus.3:rem: tRNA 2440..2515 #:S.aureus.3:rem: /gene="tRNA-Thr" #:S.aureus.3:rem: /anticodon=(pos:2473..2475,aa:Thr) #:S.aureus.3:rem: /product="transfer RNA-Thr" #:S.aureus.3:rem: tRNA 2522..2594 #:S.aureus.3:rem: /gene="tRNA-Lys" #:S.aureus.3:rem: /product="transfer RNA-Lys" #:S.aureus.3:rem: tRNA 2627..2701 #:S.aureus.3:rem: /gene="tRNA-Gly" #:S.aureus.3:rem: /anticodon=(pos:2659..2661,aa:Gly) #:S.aureus.3:rem: /product="transfer RNA-Gly" #:S.aureus.3:rem: tRNA 2709..2797 #:S.aureus.3:rem: /gene="tRNA-Leu" #:S.aureus.3:rem: /anticodon=(pos:2743..2745,aa:Leu) #:S.aureus.3:rem: /product="transfer RNA-Leu" #:S.aureus.3:rem: tRNA 2803..2879 #:S.aureus.3:rem: /gene="tRNA-Arg" #:S.aureus.3:rem: /anticodon=(pos:2837..2839,aa:Arg) #:S.aureus.3:rem: /product="transfer RNA-Arg" #:S.aureus.3:rem: tRNA 2900..2973 #:S.aureus.3:rem: /gene="tRNA-Pro" #:S.aureus.3:rem: /product="transfer RNA-Pro" #:S.aureus.3:rem: tRNA 2997..3072 #:S.aureus.3:rem: /gene="tRNA-Ala" #:S.aureus.3:rem: rRNA 3194..4748 #:S.aureus.3:rem: /gene="16S rRNA" #:S.aureus.3:rem: /product="16S ribosomal RNA" #:S.aureus.3:rem: tRNA 4841..4917 #:S.aureus.3:rem: /gene="tRNA-Ile" #:S.aureus.3:rem: /anticodon=(pos:4875..4877,aa:Ile) #:S.aureus.3:rem: /product="transfer RNA-Ile" #:S.aureus.3:rem: rRNA 5208..8130 #:S.aureus.3:rem: /gene="23S rRNA" #:S.aureus.3:rem: /product="23S ribosomal RNA" #:S.aureus.3:rem: rRNA 8203..8317 #:S.aureus.3:rem: /gene="5S rRNA" #:S.aureus.3:rem: /product="5S ribosomal RNA" #:S.aureus.3:rem: rRNA 8528..10082 #:S.aureus.3:rem: /gene="16S rRNA" #:S.aureus.3:rem: /product="16S ribosomal RNA" #:S.aureus.3:rem: rRNA 10381..13214 #:S.aureus.3:rem: /gene="23S rRNA" #:S.aureus.3:rem: /product="23S ribosomal RNA" #:S.aureus.3:rem:BASE COUNT 3909 a 2509 c 3510 g 3286 t #:S.aureus.3:rem:ORIGIN #:S.carnosus:name:Staphylococcus carnosus #:S.carnosus:subsp: #:S.carnosus:strain: #:S.carnosus:atcc: #:S.carnosus:acs:X68419 #:S.carnosus:auth: #:S.carnosus:title: #:S.carnosus:jour: #:S.carnosus:who: #:S.carnosus:date: #:S.carnosus:rem:ID SC23SRRN standard; DNA; PRO; 2924 BP. #:S.carnosus:rem:XX #:S.carnosus:rem:AC X68419; #:S.carnosus:rem:XX #:S.carnosus:rem:DT 20-APR-1993 (Rel. 35, Created) #:S.carnosus:rem:DT 20-APR-1993 (Rel. 35, Last updated, Version 2) #:S.carnosus:rem:XX #:S.carnosus:rem:DE S.carnosus gene for 23S rRNA #:S.carnosus:rem:XX #:S.carnosus:rem:KW 23S ribosomal RNA. #:S.carnosus:rem:XX #:S.carnosus:rem:OS Staphylococcus carnosus #:S.carnosus:rem:OC Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:S.carnosus:rem:OC Micrococcaceae. #:S.carnosus:rem:XX #:S.carnosus:rem:RN [1] #:S.carnosus:rem:RP 1-2924 #:S.carnosus:rem:RA Ludwig W.; #:S.carnosus:rem:RT ; #:S.carnosus:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:S.carnosus:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:S.carnosus:rem:RL 8000 Muenchen 2, FRG #:S.carnosus:rem:XX #:S.carnosus:rem:RN [2] #:S.carnosus:rem:RP 1-2924 #:S.carnosus:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:S.carnosus:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:S.carnosus:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:S.carnosus:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:S.carnosus:rem:RT with a low DNA G+C content"; #:S.carnosus:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:S.carnosus:rem:XX #:S.carnosus:rem:FH Key Location/Qualifiers #:S.carnosus:rem:FH #:S.carnosus:rem:FT source 1..2924 #:S.carnosus:rem:FT /organism="Staphylococcus carnosus" #:S.carnosus:rem:FT /strain="DSM 20501" #:S.carnosus:rem:FT rRNA 1..2924 #:S.carnosus:rem:FT /product="23S ribosomal RNA" #:S.carnosus:rem:XX #:S.carnosus:rem:SQ Sequence 2924 BP; 797 A; 608 C; 877 G; 642 T; 0 other; #:S.piscifer:title:subspecies of Staphylococcus carnosus Schleifer and Fischer #:S.piscifer:title:1982 #:S.piscifer:title:Description of Staphylococcus condimenti sp. nov., a new #:S.piscifer:auth:Hammes,W.P. #:S.piscifer:title:species isolated from soy sauce mash. Description of #:S.piscifer:name:Staphylococcus piscifermentans. #:S.piscifer:subsp: #:S.piscifer:strain:SK03 T #:S.piscifer:atcc: #:S.piscifer:acs:Y15752 #:S.piscifer:auth:Probst,A.J., Hertel,C., Richter,L., Wassill,L., Ludwig,W. and #:S.piscifer:title:Staphylococcus carnosus subsp. utilis subsp. nov., a new #:S.piscifer:jour:Unpublished #:S.piscifer:who: #:S.piscifer:date:09-DEC-1997 #:S.piscifer:rem:ref:1 (bases 1 to 2933) #:S.piscifer:rem:ref:2 (bases 1 to 2933) #:S.piscifer:rem:auth:Ludwig,W. #:S.piscifer:rem:jour:Submitted (01-DEC-1997) W. Ludwig, Lehrstuhl fuer #:S.piscifer:rem:: Mikrobiologie, Technische Universitaet Muenchen, Munich, FRG #:S.piscifer:rem:title:Direct Submission #:S.piscifer:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:S.piscifer:rem:GenBank ACCESSION:Y15752 #:S.condimen:name:Staphylococcus condimenti #:S.condimen:subsp: #:S.condimen:strain: #:S.condimen:atcc: #:S.condimen:acs:Y15755 #:S.condimen:auth: #:S.condimen:title: #:S.condimen:jour: #:S.condimen:who: #:S.condimen:date: #:S.condimen:rem:LOCUS SCY15755 2905 bp RNA BCT 09-DEC-1997 #:S.condimen:rem:DEFINITION Staphylococcus condimenti 23S rRNA gene, strain F-2 T, DSM 11674 T. #:S.condimen:rem:ACCESSION Y15755 #:S.condimen:rem:NID g2673878 #:S.condimen:rem:KEYWORDS 23S ribosomal RNA; 23S rRNA gene. #:S.condimen:rem:SOURCE Staphylococcus condimenti. #:S.condimen:rem: ORGANISM Staphylococcus condimenti #:S.condimen:rem: Eubacteria; Firmicutes; Low G+C gram-positive bacteria; #:S.condimen:rem: Bacillaceae; Staphylococcus. #:S.condimen:rem:REFERENCE 1 (bases 1 to 2905) #:S.condimen:rem: AUTHORS Probst,A.J., Hertel,C., Richter,L., Wassill,L., Ludwig,W. and #:S.condimen:rem: Hammes,W.P. #:S.condimen:rem: TITLE Description of Staphylococcus condimenti sp. nov., a new species #:S.condimen:rem: isolated from soy sauce mash. Description of Staphylococcus #:S.condimen:rem: carnosus subsp. utilis subsp. nov., a new subspecies of #:S.condimen:rem: Staphylococcus carnosus Schleifer and Fischer 1982 #:S.condimen:rem: JOURNAL Unpublished #:S.condimen:rem:REFERENCE 2 (bases 1 to 2905) #:S.condimen:rem: AUTHORS Ludwig,W. #:S.condimen:rem: TITLE Direct Submission #:S.condimen:rem: JOURNAL Submitted (01-DEC-1997) W. Ludwig, Lehrstuhl fuer Mikrobiologie, #:S.condimen:rem: Technische Universitaet Muenchen, Munich, FRG #:S.condimen:rem:FEATURES Location/Qualifiers #:S.condimen:rem: source 1..2905 #:S.condimen:rem: /organism="Staphylococcus condimenti" #:S.condimen:rem: /strain="F-2 T" #:S.condimen:rem: /strain="DSM 11674 T" #:S.condimen:rem: /db_xref="taxon:70255" #:S.condimen:rem: rRNA 1..2905 #:S.condimen:rem: /gene="23S rRNA" #:S.condimen:rem: /product="23S ribosomal RNA" #:S.condimen:rem: gene 1..2905 #:S.condimen:rem: /gene="23S rRNA" #:S.condimen:rem:BASE COUNT 789 a 609 c 876 g 631 t #:S.condimen:rem:ORIGIN #:B.anthraci:name:Bacillus anthracis #:B.anthraci:subsp: #:B.anthraci:strain: #:B.anthraci:atcc: #:B.anthraci:acs:X64645 #:B.anthraci:auth: #:B.anthraci:title: #:B.anthraci:jour: #:B.anthraci:who: #:B.anthraci:date: #:B.anthraci:rem:ID BA23SRNA standard; RNA; PRO; 2920 BP. #:B.anthraci:rem:XX #:B.anthraci:rem:AC X64645; #:B.anthraci:rem:XX #:B.anthraci:rem:DT 28-JUL-1992 (Rel. 32, Created) #:B.anthraci:rem:DT 28-JUL-1992 (Rel. 32, Last updated, Version 2) #:B.anthraci:rem:XX #:B.anthraci:rem:DE B.anthracis gene for 23S rRNA #:B.anthraci:rem:XX #:B.anthraci:rem:KW 23S ribosomal RNA. #:B.anthraci:rem:XX #:B.anthraci:rem:OS Bacillus anthracis #:B.anthraci:rem:OC Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:B.anthraci:rem:OC Bacillaceae; Bacillus. #:B.anthraci:rem:XX #:B.anthraci:rem:RN [1] #:B.anthraci:rem:RP 1-2920 #:B.anthraci:rem:RA Ash C.A.; #:B.anthraci:rem:RT ; #:B.anthraci:rem:RL Submitted (24-FEB-1992) on tape to the EMBL Data Library by: #:B.anthraci:rem:RL C.A. Ash, Institut of Food Research, Shinfield, Reading, RG2 9AT, #:B.anthraci:rem:RL UK #:B.anthraci:rem:XX #:B.anthraci:rem:RN [2] #:B.anthraci:rem:RP 1-2920 #:B.anthraci:rem:RA Ash C., Collins M.D.; #:B.anthraci:rem:RT "Comparative analysis of 23S ribosomal RNA gene sequences of B. #:B.anthraci:rem:RT anthracis and emetic Bacillus cereus determined by PCR-direct #:B.anthraci:rem:RT sequencing"; #:B.anthraci:rem:RL FEMS Microbiol. Lett. 94:75-80(1992). #:B.anthraci:rem:XX #:B.anthraci:rem:CC *source: strain=var Sterne; #:B.anthraci:rem:XX #:B.anthraci:rem:CC See also x64646 #:B.anthraci:rem:XX #:B.anthraci:rem:FH Key Location/Qualifiers #:B.anthraci:rem:FH #:B.anthraci:rem:FT rRNA 1..2920 #:B.anthraci:rem:FT /product="23S rRNA" #:B.anthraci:rem:XX #:B.anthraci:rem:SQ Sequence 2920 BP; 787 A; 618 C; 882 G; 600 T; 33 other; #:B.cereus.1:name:Bacillus cereus #:B.cereus.1:subsp: #:B.cereus.1:strain: #:B.cereus.1:atcc: #:B.cereus.1:acs:S43429 #:B.cereus.1:auth: #:B.cereus.1:title: #:B.cereus.1:jour: #:B.cereus.1:who: #:B.cereus.1:date: #:B.cereus.1:rem:LOCUS S113019 2921 bp DNA NLM 04-NOV-1992 #:B.cereus.1:rem:DEFINITION 23S ribosomal RNA [Bacillus cereus, NCTC 11143, Genomic, 2921 nt] #:B.cereus.1:rem:ACCESSION S43429 #:B.cereus.1:rem:KEYWORDS . #:B.cereus.1:rem:SOURCE Bacillus cereus NCTC 11143 #:B.cereus.1:rem: ORGANISM Bacillus cereus #:B.cereus.1:rem: Unclassified. #:B.cereus.1:rem:REFERENCE 1 (bases 1 to 2921) #:B.cereus.1:rem: AUTHORS Ash,C. and Collins,M.D. #:B.cereus.1:rem: TITLE Comparative analysis of 23S ribosomal RNA gene sequences of #:B.cereus.1:rem: Bacillus anthracis and emetic Bacillus cereus determined by #:B.cereus.1:rem: PCR-direct sequencing. #:B.cereus.1:rem: JOURNAL FEMS Microbiol. Lett. 73, 75-80 (1992) #:B.cereus.1:rem: STANDARD full automatic #:B.cereus.1:rem:COMMENT #:B.cereus.1:rem: This entry incorporates information provided by the National #:B.cereus.1:rem: Library of Medicine's GenInfo Backbone as NCBI gibbsq 113019. #:B.cereus.1:rem: This sequence comes from Fig. 2. #:B.cereus.1:rem:FEATURES Location/Qualifiers #:B.cereus.1:rem: rRNA 1..2921 #:B.cereus.1:rem: /note="Description: 23S ribosomal RNA" #:B.cereus.1:rem:BASE COUNT 789 a 618 c 882 g 601 t 31 others #:B.cereus.1:rem:ORIGIN #:B.cereus.2:name:Bacillus cereus #:B.cereus.2:subsp: #:B.cereus.2:strain: #:B.cereus.2:atcc: #:B.cereus.2:acs:X94448 #:B.cereus.2:auth: #:B.cereus.2:title: #:B.cereus.2:jour: #:B.cereus.2:who: #:B.cereus.2:date: #:B.cereus.2:rem:LOCUS BC16S23SD 2978 bp DNA BCT 05-JAN-1996 #:B.cereus.2:rem:DEFINITION B.cereus 23S rDNA and 16S-23S spacer region. #:B.cereus.2:rem:ACCESSION X94448 #:B.cereus.2:rem:NID g1149455 #:B.cereus.2:rem:KEYWORDS 16S ribosomal RNA; 16S rRNA gene; #:B.cereus.2:rem: 16S-23S rRNA intergenic spacer region; 23S ribosomal RNA; #:B.cereus.2:rem: 23S rRNA gene. #:B.cereus.2:rem:SOURCE Bacillus cereus. #:B.cereus.2:rem: ORGANISM Bacillus cereus #:B.cereus.2:rem: Eubacteria; Firmicutes; Low G+C gram-positive bacteria; #:B.cereus.2:rem: Bacillaceae; Bacillus. #:B.cereus.2:rem:REFERENCE 1 (bases 1 to 2978) #:B.cereus.2:rem: AUTHORS Meile,L., Geissmann,T., Gut,M., Baumgartner,A. and Teuber,M. #:B.cereus.2:rem: TITLE Differentiation betwen Bacillus thuringiensis and Bacillus cereus #:B.cereus.2:rem: according to their 23s rDNA sequences #:B.cereus.2:rem: JOURNAL Unpublished #:B.cereus.2:rem:REFERENCE 2 (bases 1 to 2978) #:B.cereus.2:rem: AUTHORS Geissmann,T. #:B.cereus.2:rem: TITLE Direct Submission #:B.cereus.2:rem: JOURNAL Submitted (27-DEC-1995) T. Geissmann, Swiss Federal Institute of #:B.cereus.2:rem: Technology, ETH, Laboratory of Food Microbiology, ETH Zentrum, #:B.cereus.2:rem: CH-8092 Zuerich, SWITZERLAND #:B.cereus.2:rem:COMMENT #:B.cereus.2:rem: NCBI gi: 1149455 #:B.cereus.2:rem:FEATURES Location/Qualifiers #:B.cereus.2:rem: source 1..2978 #:B.cereus.2:rem: /organism="Bacillus cereus" #:B.cereus.2:rem: /strain="DSM31" #:B.cereus.2:rem: rRNA <1..54 #:B.cereus.2:rem: /gene="16s rRNA" #:B.cereus.2:rem: /product="16S ribosomal RNA" #:B.cereus.2:rem: misc_feature 55..196 #:B.cereus.2:rem: /note="16S-23S rRNA spacer" #:B.cereus.2:rem: rRNA 197..>2978 #:B.cereus.2:rem: /gene="23S rRNA" #:B.cereus.2:rem: /product="23S ribosomal RNA" #:B.cereus.2:rem:BASE COUNT 805 a 624 c 894 g 650 t 5 others #:B.cereus.2:rem:ORIGIN #:B.thuringi:name:Bacillus thuringiensis #:B.thuringi:subsp: #:B.thuringi:strain: #:B.thuringi:atcc: #:B.thuringi:acs:X89895 #:B.thuringi:auth: #:B.thuringi:title: #:B.thuringi:jour: #:B.thuringi:who: #:B.thuringi:date: #:B.thuringi:rem:LOCUS BT16S23S 2978 bp DNA BCT 28-JUL-1995 #:B.thuringi:rem:DEFINITION B.thuringiensis DNA for 16S and 23S rRNA and spacer region. #:B.thuringi:rem:ACCESSION X89895 #:B.thuringi:rem:KEYWORDS 16S ribosomal RNA; 16S rRNA gene; 16S-23S rRNA spacer; #:B.thuringi:rem: 23S ribosomal RNA; 23S rRNA gene. #:B.thuringi:rem:SOURCE Bacillus thuringiensis. #:B.thuringi:rem: ORGANISM Bacillus thuringiensis #:B.thuringi:rem: Eubacteria; Firmicutes; Low G+C gram-positive bacteria; #:B.thuringi:rem: Bacillaceae; Bacillus. #:B.thuringi:rem:REFERENCE 1 (bases 1 to 2978) #:B.thuringi:rem: AUTHORS Meile,L., Gut, Baumgartner,A. and Teuber,M. #:B.thuringi:rem: TITLE Differentiation between Bacillus thuringiensis and Bacillus cereus #:B.thuringi:rem: according to their 23S rDNA sequences #:B.thuringi:rem: JOURNAL Unpublished #:B.thuringi:rem:REFERENCE 2 (bases 1 to 2978) #:B.thuringi:rem: AUTHORS Meile,L. #:B.thuringi:rem: TITLE Direct Submission #:B.thuringi:rem: JOURNAL Submitted (21-JUL-1995) to the EMBL/GenBank/DDBJ databases. L. #:B.thuringi:rem: Meile, Food Microbiology, Swiss Federal Inst. of Technology ETH, #:B.thuringi:rem: ETH-Zentrum, LFV, CH- 8092 Zuerich, SWITZERLAND #:B.thuringi:rem:COMMENT #:B.thuringi:rem: NCBI gi: 927390 #:B.thuringi:rem:FEATURES Location/Qualifiers #:B.thuringi:rem: source 1..2978 #:B.thuringi:rem: /organism="Bacillus thuringiensis" #:B.thuringi:rem: /strain="DSM 2046" #:B.thuringi:rem: rRNA <1..54 #:B.thuringi:rem: /gene="16S rRNA" #:B.thuringi:rem: /product="16S ribosomal RNA" #:B.thuringi:rem: misc_feature 55..195 #:B.thuringi:rem: /note="16S-23S rRNA spacer" #:B.thuringi:rem: rRNA 196..2978 #:B.thuringi:rem: /gene="23S rRNA" #:B.thuringi:rem: /product="16S ribosomal RNA" #:B.thuringi:rem:BASE COUNT 808 a 622 c 893 g 655 t #:B.thuringi:rem:ORIGIN #:B.globispo:name:Bacillus globisporus #:B.globispo:subsp: #:B.globispo:strain: #:B.globispo:atcc: #:B.globispo:acs:X68424 #:B.globispo:auth: #:B.globispo:title: #:B.globispo:jour: #:B.globispo:who: #:B.globispo:date: #:B.globispo:rem:ID BG23SRRN standard; DNA; PRO; 2932 BP. #:B.globispo:rem:XX #:B.globispo:rem:AC X68424; #:B.globispo:rem:XX #:B.globispo:rem:DT 29-MAR-1993 (Rel. 35, Created) #:B.globispo:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:B.globispo:rem:XX #:B.globispo:rem:DE B.globisporus gene for 23S rRNA #:B.globispo:rem:XX #:B.globispo:rem:KW 23S ribosomal RNA. #:B.globispo:rem:XX #:B.globispo:rem:OS Bacillus globisporus #:B.globispo:rem:OC Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:B.globispo:rem:OC Bacillaceae; Bacillus. #:B.globispo:rem:XX #:B.globispo:rem:RN [1] #:B.globispo:rem:RP 1-2932 #:B.globispo:rem:RA Ludwig W.; #:B.globispo:rem:RT ; #:B.globispo:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:B.globispo:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:B.globispo:rem:RL 8000 Muenchen 2, FRG #:B.globispo:rem:XX #:B.globispo:rem:RN [2] #:B.globispo:rem:RP 1-2932 #:B.globispo:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:B.globispo:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:B.globispo:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:B.globispo:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:B.globispo:rem:RT with a low DNA G+C content"; #:B.globispo:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:B.globispo:rem:XX #:B.globispo:rem:CC *source: strain=DSM 4; #:B.globispo:rem:XX #:B.globispo:rem:FH Key Location/Qualifiers #:B.globispo:rem:FH #:B.globispo:rem:FT rRNA 1..2932 #:B.globispo:rem:FT /product="23S ribosomal RNA" #:B.globispo:rem:XX #:B.globispo:rem:SQ Sequence 2932 BP; 818 A; 624 C; 900 G; 590 T; 0 other; #:B.subtil.W:name:Bacillis subtilis #:B.subtil.W:subsp:operon W #:B.subtil.W:strain: #:B.subtil.W:atcc: #:B.subtil.W:acs:AL009126 #:B.subtil.W:auth: #:B.subtil.W:title: #:B.subtil.W:jour: #:B.subtil.W:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.W:date:Mon Feb 16 21:53:53 1998 #:B.subtil.O:name:Bacillis subtilis #:B.subtil.O:subsp:operon O #:B.subtil.O:strain: #:B.subtil.O:atcc: #:B.subtil.O:acs:AL009126 #:B.subtil.O:auth: #:B.subtil.O:title: #:B.subtil.O:jour: #:B.subtil.O:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.O:date:Mon Feb 16 21:53:53 1998 #:B.subtil.J:name:Bacillis subtilis #:B.subtil.J:subsp:operon J #:B.subtil.J:strain: #:B.subtil.J:atcc: #:B.subtil.J:acs:AL009126 #:B.subtil.J:auth: #:B.subtil.J:title: #:B.subtil.J:jour: #:B.subtil.J:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.J:date:Mon Feb 16 21:53:53 1998 #:B.subtil.I:name:Bacillis subtilis #:B.subtil.I:subsp:operon I #:B.subtil.I:strain: #:B.subtil.I:atcc: #:B.subtil.I:acs:AL009126 #:B.subtil.I:auth: #:B.subtil.I:title: #:B.subtil.I:jour: #:B.subtil.I:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.I:date:Mon Feb 16 21:53:53 1998 #:B.subtil.H:name:Bacillis subtilis #:B.subtil.H:subsp:operon H #:B.subtil.H:strain: #:B.subtil.H:atcc: #:B.subtil.H:acs:AL009126 #:B.subtil.H:auth: #:B.subtil.H:title: #:B.subtil.H:jour: #:B.subtil.H:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.H:date:Mon Feb 16 21:53:53 1998 #:B.subtil.G:name:Bacillis subtilis #:B.subtil.G:subsp:operon G #:B.subtil.G:strain: #:B.subtil.G:atcc: #:B.subtil.G:acs:AL009126 #:B.subtil.G:auth: #:B.subtil.G:title: #:B.subtil.G:jour: #:B.subtil.G:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.G:date:Mon Feb 16 21:53:53 1998 #:B.subtil.E:name:Bacillis subtilis #:B.subtil.E:subsp:operon E #:B.subtil.E:strain: #:B.subtil.E:atcc: #:B.subtil.E:acs:AL009126 #:B.subtil.E:auth: #:B.subtil.E:title: #:B.subtil.E:jour: #:B.subtil.E:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.E:date:Mon Feb 16 21:53:53 1998 #:B.subtil.D:name:Bacillis subtilis #:B.subtil.D:subsp:operon D #:B.subtil.D:strain: #:B.subtil.D:atcc: #:B.subtil.D:acs:AL009126 #:B.subtil.D:auth: #:B.subtil.D:title: #:B.subtil.D:jour: #:B.subtil.D:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.D:date:Mon Feb 16 21:53:53 1998 #:B.subtil.B:name:Bacillis subtilis #:B.subtil.B:subsp:operon B #:B.subtil.B:strain: #:B.subtil.B:atcc: #:B.subtil.B:acs:AL009126 #:B.subtil.B:auth: #:B.subtil.B:title: #:B.subtil.B:jour: #:B.subtil.B:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.B:date:Mon Feb 16 21:53:53 1998 #:B.subtil.A:name:Bacillus subtilis #:B.subtil.A:subsp:operon A #:B.subtil.A:strain: #:B.subtil.A:atcc: #:B.subtil.A:acs:AL009126 #:B.subtil.A:auth: #:B.subtil.A:title: #:B.subtil.A:jour: #:B.subtil.A:who:Robin Gutell,Chem-359,28595,7868901 #:B.subtil.A:date:Mon Feb 16 21:40:37 1998 #:B.subti.01:name:Bacillus subtilis #:B.subti.01:subsp: #:B.subti.01:strain: #:B.subti.01:atcc:? #:B.subti.01:acs:K00637,AF008220, Z99119 #:B.subti.01:auth: #:B.subti.01:title: #:B.subti.01:jour:B.subtilis:who:published #:B.subti.01:who:published #:B.subti.01:date:1/30/84;2/7/84;5/27/85 #:B.subti.01:rem:Phylo:Eubacteria,GM+,lowGC,Bacillus #:B.subti.01:rem:auth:Connors,M.J., Mason,J.M. and Setlow,P. #:B.subti.01:rem:jour:J. Bacteriol. 166 (2), 417-425 (1986) #:B.subti.01:rem:title:Cloning and nucleotide sequencing of genes for three #:B.subti.01:rem:: small, acid-soluble proteins from Bacillus subtilis spores #:B.subti.01:rem:ref:3 (bases 213161 to 218473) #:B.subti.01:rem:auth:Ogasawara,N., Moriya,S., Mazza,P.G. and Yoshikawa,H. #:B.subti.01:rem:jour:Nucleic Acids Res. 14 (24), 9989-9999 (1986) #:B.subti.01:rem:title:Nucleotide sequence and organization of dnaB gene and #:B.subti.01:rem:: neighbouring genes on the Bacillus subtilis chromosome #:B.subti.02:name: #:B.subti.02:subsp: #:B.subti.02:strain: #:B.subti.02:atcc: #:B.subti.02:acs:D11460 #:B.subti.02:auth: #:B.subti.02:title: #:B.subti.02:jour: #:B.subti.02:who: #:B.subti.02:date: #:B.subti.02:rem:ID BACRRNI unannotated; DNA; PRO; 3041 BP. #:B.subti.02:rem:XX #:B.subti.02:rem:AC D11460; #:B.subti.02:rem:XX #:B.subti.02:rem:DT 16-JUL-1992 (Rel. 32, Created) #:B.subti.02:rem:DT 16-JUL-1992 (Rel. 32, Last updated, Version 1) #:B.subti.02:rem:XX #:B.subti.02:rem:DE B. subtilis gene for 23S rRNA and 5S rRNA, partial sequence. #:B.subti.02:rem:XX #:B.subti.02:rem:KW 23S ribosomal RNA; 23S rRNA; 5S ribosomal RNA; 5S rRNA; #:B.subti.02:rem:KW rrnI operon. #:B.subti.02:rem:XX #:B.subti.02:rem:OS Bacillus subtilis #:B.subti.02:rem:OC Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:B.subti.02:rem:OC Bacillaceae; Bacillus. #:B.subti.02:rem:XX #:B.subti.02:rem:RN [1] #:B.subti.02:rem:RP 1-3041 #:B.subti.02:rem:RA Sutherland K.J., Kudo T., Horikoshi K.; #:B.subti.02:rem:RT ; #:B.subti.02:rem:RL Unpublished. #:B.subti.02:rem:XX #:B.subti.02:rem:RN [2] #:B.subti.02:rem:RA Wawrousek E.F., Hansen N.J.; #:B.subti.02:rem:RT "Structure and organization of a cluster of six tRNA genes in the #:B.subti.02:rem:RT space between Tandem ribosomal RNA gene sets in Bacillus #:B.subti.02:rem:RT subtilis"; #:B.subti.02:rem:RL J. Biol. Chem. 258:291-298(1992). #:B.subti.02:rem:XX #:B.subti.02:rem:CC These data kindly submitted in computer readable form by: Toshiaki #:B.subti.02:rem:CC Kudo Riken Institute, Microbiology 2-1 Hirosawa, Wako Saitama #:B.subti.02:rem:CC 351-01 Japan Phone: 0484-62-1111 x3443 Email: #:B.subti.02:rem:CC tkudo@rkna50.riken.go.jp Fax: 0484-62-4672 #:B.subti.02:rem:XX #:B.subti.02:rem:FH Key Location/Qualifiers #:B.subti.02:rem:FH #:B.subti.02:rem:XX #:B.subti.02:rem:SQ Sequence 3041 BP; 803 A; 683 C; 935 G; 620 T; 0 other; #:B.subti.03:name:Bacillus subtilis. #:B.subti.03:subsp: #:B.subti.03:strain: #:B.subti.03:atcc: #:B.subti.03:acs:Z82044 #:B.subti.03:auth:Cummings,N.J. and Connerton,I.F. #:B.subti.03:title:The Bacillus subtilis 168 chromosome from sspE tp katA #:B.subti.03:jour:Microbiology 143, 1855-1859 (1997) #:B.subti.03:who: #:B.subti.03:date:30-JUN-1997 #:B.subti.03:rem:ref:1 (bases 1 to 24524) #:B.subti.03:rem:ref:2 (bases 1 to 24524) #:B.subti.03:rem:auth:Cummings,N.J. #:B.subti.03:rem:jour:Submitted (15-NOV-1996) Nicola J. Cummings, Food #:B.subti.03:rem:: Macromolecular Science, Institute of Food Research, Earley #:B.subti.03:rem:: Gate, Whiteknights Road, Reading, Berkshire, RG6 2EF, UK #:B.subti.03:rem:title:Direct Submission #:B.subti.03:rem:KEYWORDS:16S ribosomal RNA; 16S rRNA gene; 23S ribosomal RNA; #:B.subti.03:rem:: 23S rRNA gene; 5S ribosomal RNA; 5S rRNA gene; ATP-binding #:B.subti.03:rem:: transporter; catalase; dehydrogenase; #:B.subti.03:rem:: glutamate-1-semialdehyde aminotransferase; gsaB gene; #:B.subti.03:rem:: hypothetical 12.2 kd protein; hypothetical 13.5 kd protein; #:B.subti.03:rem:: katA gene; senS gene; small acid-soluble protein gamma; #:B.subti.03:rem:: sspE gene; thiA gene; tRNA-Asn gene; tRNA-Asp gene; #:B.subti.03:rem:: tRNA-Cys gene; tRNA-Gln gene; tRNA-Glu gene; tRNA-Gly gene; #:B.subti.03:rem:: tRNA-His gene; tRNA-Leu gene; tRNA-Met gene; tRNA-Phe gene; #:B.subti.03:rem:: tRNA-Ser gene; tRNA-Thr gene; tRNA-Trp gene; tRNA-Tyr gene; #:B.subti.03:rem:: tRNA-Val gene; ygaA gene; ygaB gene; ygaC gene; ygaD gene; #:B.subti.03:rem:: ygaE gene; ygaF gene; ygaG gene; ygaH gene; ygaI gene; ygaJ #:B.subti.03:rem:: gene; ygaK gene; ygxA gene. #:B.subti.03:rem:GenBank ACCESSION:Z82044 #:B.subti.04:jour:Submitted (05-NOV-1996) to the DDBJ/EMBL/GenBank databases. #:B.subti.04:jour:Yoshito Sadaie, National Institute of Genetics, Radioisotope #:B.subti.04:jour:Center; Yata 1111, Mishima, Shizuoka 411, Japan (E-mail #:B.subti.04:jour::ysadaie@lab.nig.ac.jp, Tel:81-0559-81-6870, Fax:81-0559-81-6870 #:B.subti.04:name:Bacillus subtilis. #:B.subti.04:subsp: #:B.subti.04:strain: #:B.subti.04:atcc: #:B.subti.04:acs:D88802, Z99104 #:B.subti.04:auth:Sadaie,Y. #:B.subti.04:title:Direct Submission #:B.subti.04:jour:) #:B.subti.04:who: #:B.subti.04:date:18-APR-1997 #:B.subti.04:rem:For Z99104: GB pos. #s (92251..95178) #:B.subti.04:rem:ref:1 (bases 1 to 36308) #:B.subti.04:rem:ref:2 (sites) #:B.subti.04:rem:auth:Sadaie,Y., Yata,K., Fujita,M., Sagai,H., Itaya,M., Kasahara, #:B.subti.04:rem:: Y. and Ogasawara,N. #:B.subti.04:rem:jour:Unpublished (1997) #:B.subti.04:rem:title:The nucleotide sequence of the phoB-rrnE-groESL region of #:B.subti.04:rem:: the Bacillus subtilis chromosome #:B.subti.04:rem:ref:3 (sites) #:B.subti.04:rem:auth:Sadaie,Y., Yata,K., Fujita,M., Sagai,H., Itaya,M., Kasahara, #:B.subti.04:rem:: Y. and Ogasawara,N. #:B.subti.04:rem:jour:Microbiology (1997) In press #:B.subti.04:rem:title:Nucleotide sequence and analysis of the phoB-rrnE-groESL #:B.subti.04:rem:: region of the Bacillus subtilis chromosome #:B.subti.04:rem:KEYWORDS:tRNA-Asp; tRNA-Met; tRNA-Gly; tRNA-Arg; 5S ribosomal #:B.subti.04:rem:: RNA; 16S ribosomal RNA; 23S ribosomal RNA; ydiD; groEL; groES; #:B.subti.04:rem:: ydiL; ydiK; ydiJ; ydiI; ydiH; ydiG; ydiF; ydiE; ydiC; ydiB; #:B.subti.04:rem:: ydiA; Gly-tRNA; Arg-tRNA; ydhU; ydhT; ydhS; ydhR; ydhQ; ydhP; #:B.subti.04:rem:: ydhO; ydhN; ydhM; ydhL; ydhK; ydhJ; ydhI; ydhH; ydhG; phoB; #:B.subti.04:rem:: ydhF; ydhE; ydhD; ydhC; ydhB. #:B.subti.04:rem:GenBank ACCESSION:D88802 #:B.subti.05:title:of the Bacillus subtilis chromosome. III. Nucleotide sequence #:B.subti.05:title:of some 10,000 base pairs in the origin region #:B.subti.05:name:Bacillus subtilis. #:B.subti.05:subsp: #:B.subti.05:strain: #:B.subti.05:atcc: #:B.subti.05:acs:D26185, Z99104 #:B.subti.05:auth:Moriya,S., Ogasawara,N. and Yoshikawa,H. #:B.subti.05:title:Structure and function of the region of the replication origin #:B.subti.05:jour:Nucleic Acids Res. 13 (7), 2251-2265 (1985) #:B.subti.05:who: #:B.subti.05:date:02-SEP-1996 #:B.subti.05:rem:For Z99104: GB pos. #s (11707..14634) #:B.subti.05:rem:For D26185: GB pos. #s (75309..78236) #:B.subti.05:rem:ref:1 (sites) #:B.subti.05:rem:ref:2 (sites) #:B.subti.05:rem:auth:Alonso,J.C., Shirahige,K. and Ogasawara,N. #:B.subti.05:rem:jour:Nucleic Acids Res. 18 (23), 6771-6777 (1990) #:B.subti.05:rem:title:Molecular cloning, genetic characterization and DNA #:B.subti.05:rem:: sequence analysis of the recM region of Bacillus subtilis #:B.subti.05:rem:ref:3 (sites) #:B.subti.05:rem:auth:Ogasawara,N. and Yoshikawa,H. #:B.subti.05:rem:jour:Mol. Microbiol. 6 (5), 629-634 (1992) #:B.subti.05:rem:title:Genes and their organization in the replication origin #:B.subti.05:rem:: region of the bacterial chromosome #:B.subti.05:rem:ref:4 (bases 1 to 180136) #:B.subti.05:rem:auth:Ogasawara,N., Nakai,S. and Yoshikawa,H. #:B.subti.05:rem:jour:DNA Res. 1 (1), 1-14 (1994) #:B.subti.05:rem:title:Systematic sequencing of the 180 kilobase region of the #:B.subti.05:rem:: Bacillus subtilis chromosome containing the replication #:B.subti.05:rem:: origin #:B.subti.05:rem:ref:5 (bases 1 to 180136) #:B.subti.05:rem:auth:Ogasawara,N. #:B.subti.05:rem:jour:Submitted (24-DEC-1993) to the DDBJ/EMBL/GenBank databases. #:B.subti.05:rem:: Naotake Ogasawara, Nara Institute of Science and Technology, #:B.subti.05:rem:: Department of Biological Sciences; 8916-5, Takayama, Ikoma, #:B.subti.05:rem:: Nara 630, Japan (E-mail:nogasawa@bs.aist-nara.ac.jp, Tel: #:B.subti.05:rem:: 07437-2-5430, Fax:07437-2-5439) #:B.subti.05:rem:title:Direct Submission #:B.subti.05:rem:KEYWORDS:. #:B.subti.05:rem:GenBank ACCESSION:D26185 #:B.subti.06:title:of some 10,000 base pairs in the origin region #:B.subti.06:title:Structure and function of the region of the replication origin #:B.subti.06:name:Bacillus subtilis. #:B.subti.06:subsp: #:B.subti.06:strain: #:B.subti.06:atcc: #:B.subti.06:acs:D26185, Z99104 #:B.subti.06:auth:Moriya,S., Ogasawara,N. and Yoshikawa,H. #:B.subti.06:title:of the Bacillus subtilis chromosome. III. Nucleotide sequence #:B.subti.06:jour:Nucleic Acids Res. 13 (7), 2251-2265 (1985) #:B.subti.06:who: #:B.subti.06:date:02-SEP-1996 #:B.subti.06:rem:For Z99104: GB pos. #s(32175..35102) #:B.subti.06:rem:For D26185: GB pos. #s(95777..98704) #:B.subti.06:rem:ref:1 (sites) #:B.subti.06:rem:ref:2 (sites) #:B.subti.06:rem:auth:Alonso,J.C., Shirahige,K. and Ogasawara,N. #:B.subti.06:rem:jour:Nucleic Acids Res. 18 (23), 6771-6777 (1990) #:B.subti.06:rem:title:Molecular cloning, genetic characterization and DNA #:B.subti.06:rem:: sequence analysis of the recM region of Bacillus subtilis #:B.subti.06:rem:ref:3 (sites) #:B.subti.06:rem:auth:Ogasawara,N. and Yoshikawa,H. #:B.subti.06:rem:jour:Mol. Microbiol. 6 (5), 629-634 (1992) #:B.subti.06:rem:title:Genes and their organization in the replication origin #:B.subti.06:rem:: region of the bacterial chromosome #:B.subti.06:rem:ref:4 (bases 1 to 180136) #:B.subti.06:rem:auth:Ogasawara,N., Nakai,S. and Yoshikawa,H. #:B.subti.06:rem:jour:DNA Res. 1 (1), 1-14 (1994) #:B.subti.06:rem:title:Systematic sequencing of the 180 kilobase region of the #:B.subti.06:rem:: Bacillus subtilis chromosome containing the replication #:B.subti.06:rem:: origin #:B.subti.06:rem:ref:5 (bases 1 to 180136) #:B.subti.06:rem:auth:Ogasawara,N. #:B.subti.06:rem:jour:Submitted (24-DEC-1993) to the DDBJ/EMBL/GenBank databases. #:B.subti.06:rem:: Naotake Ogasawara, Nara Institute of Science and Technology, #:B.subti.06:rem:: Department of Biological Sciences; 8916-5, Takayama, Ikoma, #:B.subti.06:rem:: Nara 630, Japan (E-mail:nogasawa@bs.aist-nara.ac.jp, Tel: #:B.subti.06:rem:: 07437-2-5430, Fax:07437-2-5439) #:B.subti.06:rem:title:Direct Submission #:B.subti.06:rem:KEYWORDS:. #:B.subti.06:rem:GenBank ACCESSION:D26185 #:B.subti.07:title:Structure and function of the region of the replication origin #:B.subti.07:title:of the Bacillus subtilis chromosome. III. Nucleotide sequence #:B.subti.07:name:Bacillus subtilis. #:B.subti.07:subsp: #:B.subti.07:strain: #:B.subti.07:atcc: #:B.subti.07:acs:D26185, Z99104 #:B.subti.07:auth:Moriya,S., Ogasawara,N. and Yoshikawa,H. #:B.subti.07:title:of some 10,000 base pairs in the origin region #:B.subti.07:jour:Nucleic Acids Res. 13 (7), 2251-2265 (1985) #:B.subti.07:who: #:B.subti.07:date:02-SEP-1996 #:B.subti.07:rem:For Z99104: GB pos. #s (98107..101034) #:B.subti.07:rem:For D26185: GB pos. #s (161709..164636) #:B.subti.07:rem:ref:1 (sites) #:B.subti.07:rem:ref:2 (sites) #:B.subti.07:rem:auth:Alonso,J.C., Shirahige,K. and Ogasawara,N. #:B.subti.07:rem:jour:Nucleic Acids Res. 18 (23), 6771-6777 (1990) #:B.subti.07:rem:title:Molecular cloning, genetic characterization and DNA #:B.subti.07:rem:: sequence analysis of the recM region of Bacillus subtilis #:B.subti.07:rem:ref:3 (sites) #:B.subti.07:rem:auth:Ogasawara,N. and Yoshikawa,H. #:B.subti.07:rem:jour:Mol. Microbiol. 6 (5), 629-634 (1992) #:B.subti.07:rem:title:Genes and their organization in the replication origin #:B.subti.07:rem:: region of the bacterial chromosome #:B.subti.07:rem:ref:4 (bases 1 to 180136) #:B.subti.07:rem:auth:Ogasawara,N., Nakai,S. and Yoshikawa,H. #:B.subti.07:rem:jour:DNA Res. 1 (1), 1-14 (1994) #:B.subti.07:rem:title:Systematic sequencing of the 180 kilobase region of the #:B.subti.07:rem:: Bacillus subtilis chromosome containing the replication #:B.subti.07:rem:: origin #:B.subti.07:rem:ref:5 (bases 1 to 180136) #:B.subti.07:rem:auth:Ogasawara,N. #:B.subti.07:rem:jour:Submitted (24-DEC-1993) to the DDBJ/EMBL/GenBank databases. #:B.subti.07:rem:: Naotake Ogasawara, Nara Institute of Science and Technology, #:B.subti.07:rem:: Department of Biological Sciences; 8916-5, Takayama, Ikoma, #:B.subti.07:rem:: Nara 630, Japan (E-mail:nogasawa@bs.aist-nara.ac.jp, Tel: #:B.subti.07:rem:: 07437-2-5430, Fax:07437-2-5439) #:B.subti.07:rem:title:Direct Submission #:B.subti.07:rem:KEYWORDS:. #:B.subti.07:rem:GenBank ACCESSION:D26185 #:B.subti.08:auth:Ehrlich,S.D., Emmerson,P.T., Entian,K.D., Errington,J., Fabret #:B.subti.08:auth:,C., Ferrari,E., Foulger,D., Fritz,C., Fujita,M., Fujita,Y., #:B.subti.08:auth:Fuma,S., Galizzi,A., Galleron,N., Ghim,S.Y., Glaser,P., #:B.subti.08:auth:Goffeau,A., Golightly,E.J., Grandi,G., Guiseppi,G., Guy,B.J., #:B.subti.08:auth:Haga,K., Haiech,J., Harwood,C.R., Henaut,A., Hilbert,H., #:B.subti.08:auth:Holsappel,S., Hosono,S., Hullo,M.F., Itaya,M., Jones,L., Joris #:B.subti.08:auth:,B., Karamata,D., Kasahara,Y., Klaerr-Blanchard,M., Klein,C., #:B.subti.08:auth:Kobayashi,Y., Koetter,P., Koningstein,G., Krogh,S., Kumano,M., #:B.subti.08:auth:Kurita,K., Lapidus,A., Lardinois,S., Lauber,J., Lazarevic,V., #:B.subti.08:auth:Lee,S.M., Levine,A., Liu,H., Masuda,S., Mauel,C., Medigue,C., #:B.subti.08:auth:Medina,N., Mellado,R.P., Mizuno,M., Moestl,D., Nakai,S., #:B.subti.08:auth:Noback,M., Noone,D., O'Reilly,M., Ogawa,K., Ogiwara,A., Oudega #:B.subti.08:auth:,B., Park,S.H., Parro,V., Pohl,T.M., Portetelle,D., Porwollik #:B.subti.08:auth:,S., Prescott,A.M., Presecan,E., Pujic,P., Purnelle,B., #:B.subti.08:auth:Rapoport,G., Rey,M., Reynolds,S., Rieger,M., Rivolta,C., Rocha #:B.subti.08:auth:,E., Roche,B., Rose,M., Sadaie,Y., Sato,T., Scanlan,E., #:B.subti.08:auth:Schleich,S., Schroeter,R., Scoffone,F., Sekiguchi,J., Sekowska #:B.subti.08:auth:,A., Seror,S.J., Serror,P., Shin,B.S., Soldo,B., Sorokin,A., #:B.subti.08:auth:Tacconi,E., Takagi,T., Takahashi,H., Takemaru,K., Takeuchi,M., #:B.subti.08:auth:Tamakoshi,A., Tanaka,T., Terpstra,P., Tognoni,A., Tosato,V., #:B.subti.08:auth:Uchiyama,S., Vandenbol,M., Vannier,F., Vassarotti,A., Viari,A., #:B.subti.08:auth:Wambutt,R., Wedler,E., Wedler,H., Weitzenegger,T., Winters,P., #:B.subti.08:auth:Wipat,A., Yamamoto,H., Yamane,K., Yasumoto,K., Yata,K., #:B.subti.08:auth:Yoshida,K., Yoshikawa,H.F., Zumstein,E., Yoshikawa,H. and #:B.subti.08:auth:Danchin,A. #:B.subti.08:auth:Kunst,F., Ogasawara,N., Moszer,I., Albertini,A.M., Alloni,G., #:B.subti.08:auth:Azevedo,V., Bertero,M.G., Bessieres,P., Bolotin,A., Borchert,S #:B.subti.08:auth:., Borriss,R., Boursier,L., Brans,A., Braun,M., Brignell,S.C., #:B.subti.08:auth:Bron,S., Brouillet,S., Bruschi,C.V., Caldwell,B., Capuano,V., #:B.subti.08:auth:Carter,N.M., Choi,S.K., Codani,J.J., Connerton,I.F., Cummings #:B.subti.08:title:The complete genome sequence of the Gram-positive bacterium #:B.subti.08:name:Bacillus subtilis. #:B.subti.08:subsp: #:B.subti.08:strain: #:B.subti.08:atcc: #:B.subti.08:acs:Z99104 #:B.subti.08:auth:,N.J., Daniel,R.A., Denizot,F., Devine,K.M., Dusterhoft,A., #:B.subti.08:title:Bacillus subtilis #:B.subti.08:jour:Nature 390, 249-256 (1997) #:B.subti.08:who: #:B.subti.08:date:20-NOV-1997 #:B.subti.08:rem:GB pos. #s 162609..165534 #:B.subti.08:rem:ref:1 (bases 1 to 213080) #:B.subti.08:rem:ref:2 (bases 1 to 213080) #:B.subti.08:rem:auth:Kunst,F., Ogasawara,N., Yoshikawa,H. and Danchin,A. #:B.subti.08:rem:jour:Submitted (18-NOV-1997) I. Moszer, A. Danchin, Institut #:B.subti.08:rem:: Pasteur, Regulation de l'Expression Genetique, 28 rue du #:B.subti.08:rem:: Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail: #:B.subti.08:rem:: moszer@pasteur.fr, adanchin@pasteur.fr Phone: +33 (0)1 45 #:B.subti.08:rem:: 68 84 41, Fax: +33 (0)1 45 68 89 48 #:B.subti.08:rem:title:Direct Submission #:B.subti.08:rem:KEYWORDS:. #:B.subti.08:rem:GenBank ACCESSION:Z99104 #:B.subti.09:auth:Ehrlich,S.D., Emmerson,P.T., Entian,K.D., Errington,J., Fabret #:B.subti.09:auth:,C., Ferrari,E., Foulger,D., Fritz,C., Fujita,M., Fujita,Y., #:B.subti.09:auth:Fuma,S., Galizzi,A., Galleron,N., Ghim,S.Y., Glaser,P., #:B.subti.09:auth:Goffeau,A., Golightly,E.J., Grandi,G., Guiseppi,G., Guy,B.J., #:B.subti.09:auth:Haga,K., Haiech,J., Harwood,C.R., Henaut,A., Hilbert,H., #:B.subti.09:auth:Holsappel,S., Hosono,S., Hullo,M.F., Itaya,M., Jones,L., Joris #:B.subti.09:auth:,B., Karamata,D., Kasahara,Y., Klaerr-Blanchard,M., Klein,C., #:B.subti.09:auth:Kobayashi,Y., Koetter,P., Koningstein,G., Krogh,S., Kumano,M., #:B.subti.09:auth:Kurita,K., Lapidus,A., Lardinois,S., Lauber,J., Lazarevic,V., #:B.subti.09:auth:Lee,S.M., Levine,A., Liu,H., Masuda,S., Mauel,C., Medigue,C., #:B.subti.09:auth:Medina,N., Mellado,R.P., Mizuno,M., Moestl,D., Nakai,S., #:B.subti.09:auth:Noback,M., Noone,D., O'Reilly,M., Ogawa,K., Ogiwara,A., Oudega #:B.subti.09:auth:,B., Park,S.H., Parro,V., Pohl,T.M., Portetelle,D., Porwollik #:B.subti.09:auth:,S., Prescott,A.M., Presecan,E., Pujic,P., Purnelle,B., #:B.subti.09:auth:Rapoport,G., Rey,M., Reynolds,S., Rieger,M., Rivolta,C., Rocha #:B.subti.09:auth:,E., Roche,B., Rose,M., Sadaie,Y., Sato,T., Scanlan,E., #:B.subti.09:auth:Schleich,S., Schroeter,R., Scoffone,F., Sekiguchi,J., Sekowska #:B.subti.09:auth:,A., Seror,S.J., Serror,P., Shin,B.S., Soldo,B., Sorokin,A., #:B.subti.09:auth:Tacconi,E., Takagi,T., Takahashi,H., Takemaru,K., Takeuchi,M., #:B.subti.09:auth:Tamakoshi,A., Tanaka,T., Terpstra,P., Tognoni,A., Tosato,V., #:B.subti.09:auth:Uchiyama,S., Vandenbol,M., Vannier,F., Vassarotti,A., Viari,A., #:B.subti.09:auth:Wambutt,R., Wedler,E., Wedler,H., Weitzenegger,T., Winters,P., #:B.subti.09:auth:Wipat,A., Yamamoto,H., Yamane,K., Yasumoto,K., Yata,K., #:B.subti.09:auth:Yoshida,K., Yoshikawa,H.F., Zumstein,E., Yoshikawa,H. and #:B.subti.09:auth:Danchin,A. #:B.subti.09:auth:Kunst,F., Ogasawara,N., Moszer,I., Albertini,A.M., Alloni,G., #:B.subti.09:auth:Azevedo,V., Bertero,M.G., Bessieres,P., Bolotin,A., Borchert,S #:B.subti.09:auth:., Borriss,R., Boursier,L., Brans,A., Braun,M., Brignell,S.C., #:B.subti.09:auth:Bron,S., Brouillet,S., Bruschi,C.V., Caldwell,B., Capuano,V., #:B.subti.09:auth:Carter,N.M., Choi,S.K., Codani,J.J., Connerton,I.F., Cummings #:B.subti.09:title:The complete genome sequence of the Gram-positive bacterium #:B.subti.09:name:Bacillus subtilis. #:B.subti.09:subsp: #:B.subti.09:strain: #:B.subti.09:atcc: #:B.subti.09:acs:Z99104 #:B.subti.09:auth:,N.J., Daniel,R.A., Denizot,F., Devine,K.M., Dusterhoft,A., #:B.subti.09:title:Bacillus subtilis #:B.subti.09:jour:Nature 390, 249-256 (1997) #:B.subti.09:who: #:B.subti.09:date:20-NOV-1997 #:B.subti.09:rem:GB pos. #s 168217..171140 #:B.subti.09:rem:ref:1 (bases 1 to 213080) #:B.subti.09:rem:ref:2 (bases 1 to 213080) #:B.subti.09:rem:auth:Kunst,F., Ogasawara,N., Yoshikawa,H. and Danchin,A. #:B.subti.09:rem:jour:Submitted (18-NOV-1997) I. Moszer, A. Danchin, Institut #:B.subti.09:rem:: Pasteur, Regulation de l'Expression Genetique, 28 rue du #:B.subti.09:rem:: Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail: #:B.subti.09:rem:: moszer@pasteur.fr, adanchin@pasteur.fr Phone: +33 (0)1 45 #:B.subti.09:rem:: 68 84 41, Fax: +33 (0)1 45 68 89 48 #:B.subti.09:rem:title:Direct Submission #:B.subti.09:rem:KEYWORDS:. #:B.subti.09:rem:GenBank ACCESSION:Z99104 #:B.subti.10:auth:Ehrlich,S.D., Emmerson,P.T., Entian,K.D., Errington,J., Fabret #:B.subti.10:auth:,C., Ferrari,E., Foulger,D., Fritz,C., Fujita,M., Fujita,Y., #:B.subti.10:auth:Fuma,S., Galizzi,A., Galleron,N., Ghim,S.Y., Glaser,P., #:B.subti.10:auth:Goffeau,A., Golightly,E.J., Grandi,G., Guiseppi,G., Guy,B.J., #:B.subti.10:auth:Haga,K., Haiech,J., Harwood,C.R., Henaut,A., Hilbert,H., #:B.subti.10:auth:Holsappel,S., Hosono,S., Hullo,M.F., Itaya,M., Jones,L., Joris #:B.subti.10:auth:,B., Karamata,D., Kasahara,Y., Klaerr-Blanchard,M., Klein,C., #:B.subti.10:auth:Kobayashi,Y., Koetter,P., Koningstein,G., Krogh,S., Kumano,M., #:B.subti.10:auth:Kurita,K., Lapidus,A., Lardinois,S., Lauber,J., Lazarevic,V., #:B.subti.10:auth:Lee,S.M., Levine,A., Liu,H., Masuda,S., Mauel,C., Medigue,C., #:B.subti.10:auth:Medina,N., Mellado,R.P., Mizuno,M., Moestl,D., Nakai,S., #:B.subti.10:auth:Noback,M., Noone,D., O'Reilly,M., Ogawa,K., Ogiwara,A., Oudega #:B.subti.10:auth:,B., Park,S.H., Parro,V., Pohl,T.M., Portetelle,D., Porwollik #:B.subti.10:auth:,S., Prescott,A.M., Presecan,E., Pujic,P., Purnelle,B., #:B.subti.10:auth:Rapoport,G., Rey,M., Reynolds,S., Rieger,M., Rivolta,C., Rocha #:B.subti.10:auth:,E., Roche,B., Rose,M., Sadaie,Y., Sato,T., Scanlan,E., #:B.subti.10:auth:Schleich,S., Schroeter,R., Scoffone,F., Sekiguchi,J., Sekowska #:B.subti.10:auth:,A., Seror,S.J., Serror,P., Shin,B.S., Soldo,B., Sorokin,A., #:B.subti.10:auth:Tacconi,E., Takagi,T., Takahashi,H., Takemaru,K., Takeuchi,M., #:B.subti.10:auth:Tamakoshi,A., Tanaka,T., Terpstra,P., Tognoni,A., Tosato,V., #:B.subti.10:auth:Uchiyama,S., Vandenbol,M., Vannier,F., Vassarotti,A., Viari,A., #:B.subti.10:auth:Wambutt,R., Wedler,E., Wedler,H., Weitzenegger,T., Winters,P., #:B.subti.10:auth:Wipat,A., Yamamoto,H., Yamane,K., Yasumoto,K., Yata,K., #:B.subti.10:auth:Yoshida,K., Yoshikawa,H.F., Zumstein,E., Yoshikawa,H. and #:B.subti.10:auth:Danchin,A. #:B.subti.10:auth:Kunst,F., Ogasawara,N., Moszer,I., Albertini,A.M., Alloni,G., #:B.subti.10:auth:Azevedo,V., Bertero,M.G., Bessieres,P., Bolotin,A., Borchert,S #:B.subti.10:auth:., Borriss,R., Boursier,L., Brans,A., Braun,M., Brignell,S.C., #:B.subti.10:auth:Bron,S., Brouillet,S., Bruschi,C.V., Caldwell,B., Capuano,V., #:B.subti.10:auth:Carter,N.M., Choi,S.K., Codani,J.J., Connerton,I.F., Cummings #:B.subti.10:title:The complete genome sequence of the Gram-positive bacterium #:B.subti.10:name:Bacillus subtilis. #:B.subti.10:subsp: #:B.subti.10:strain: #:B.subti.10:atcc: #:B.subti.10:acs:Z99104 #:B.subti.10:auth:,N.J., Daniel,R.A., Denizot,F., Devine,K.M., Dusterhoft,A., #:B.subti.10:title:Bacillus subtilis #:B.subti.10:jour:Nature 390, 249-256 (1997) #:B.subti.10:who: #:B.subti.10:date:20-NOV-1997 #:B.subti.10:rem:GB pos. #s 173213..176140 #:B.subti.10:rem:ref:1 (bases 1 to 213080) #:B.subti.10:rem:ref:2 (bases 1 to 213080) #:B.subti.10:rem:auth:Kunst,F., Ogasawara,N., Yoshikawa,H. and Danchin,A. #:B.subti.10:rem:jour:Submitted (18-NOV-1997) I. Moszer, A. Danchin, Institut #:B.subti.10:rem:: Pasteur, Regulation de l'Expression Genetique, 28 rue du #:B.subti.10:rem:: Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail: #:B.subti.10:rem:: moszer@pasteur.fr, adanchin@pasteur.fr Phone: +33 (0)1 45 #:B.subti.10:rem:: 68 84 41, Fax: +33 (0)1 45 68 89 48 #:B.subti.10:rem:title:Direct Submission #:B.subti.10:rem:KEYWORDS:. #:B.subti.10:rem:GenBank ACCESSION:Z99104 #:B.subti.11:auth:,N.J., Daniel,R.A., Denizot,F., Devine,K.M., Dusterhoft,A., #:B.subti.11:auth:Ehrlich,S.D., Emmerson,P.T., Entian,K.D., Errington,J., Fabret #:B.subti.11:auth:,C., Ferrari,E., Foulger,D., Fritz,C., Fujita,M., Fujita,Y., #:B.subti.11:auth:Fuma,S., Galizzi,A., Galleron,N., Ghim,S.Y., Glaser,P., #:B.subti.11:auth:Goffeau,A., Golightly,E.J., Grandi,G., Guiseppi,G., Guy,B.J., #:B.subti.11:auth:Haga,K., Haiech,J., Harwood,C.R., Henaut,A., Hilbert,H., #:B.subti.11:auth:Holsappel,S., Hosono,S., Hullo,M.F., Itaya,M., Jones,L., Joris #:B.subti.11:auth:,B., Karamata,D., Kasahara,Y., Klaerr-Blanchard,M., Klein,C., #:B.subti.11:auth:Kobayashi,Y., Koetter,P., Koningstein,G., Krogh,S., Kumano,M., #:B.subti.11:auth:Kurita,K., Lapidus,A., Lardinois,S., Lauber,J., Lazarevic,V., #:B.subti.11:auth:Lee,S.M., Levine,A., Liu,H., Masuda,S., Mauel,C., Medigue,C., #:B.subti.11:auth:Medina,N., Mellado,R.P., Mizuno,M., Moestl,D., Nakai,S., #:B.subti.11:auth:Noback,M., Noone,D., O'Reilly,M., Ogawa,K., Ogiwara,A., Oudega #:B.subti.11:auth:,B., Park,S.H., Parro,V., Pohl,T.M., Portetelle,D., Porwollik #:B.subti.11:auth:,S., Prescott,A.M., Presecan,E., Pujic,P., Purnelle,B., #:B.subti.11:auth:Rapoport,G., Rey,M., Reynolds,S., Rieger,M., Rivolta,C., Rocha #:B.subti.11:auth:,E., Roche,B., Rose,M., Sadaie,Y., Sato,T., Scanlan,E., #:B.subti.11:auth:Schleich,S., Schroeter,R., Scoffone,F., Sekiguchi,J., Sekowska #:B.subti.11:auth:,A., Seror,S.J., Serror,P., Shin,B.S., Soldo,B., Sorokin,A., #:B.subti.11:auth:Tacconi,E., Takagi,T., Takahashi,H., Takemaru,K., Takeuchi,M., #:B.subti.11:auth:Tamakoshi,A., Tanaka,T., Terpstra,P., Tognoni,A., Tosato,V., #:B.subti.11:auth:Uchiyama,S., Vandenbol,M., Vannier,F., Vassarotti,A., Viari,A., #:B.subti.11:auth:Wambutt,R., Wedler,E., Wedler,H., Weitzenegger,T., Winters,P., #:B.subti.11:auth:Wipat,A., Yamamoto,H., Yamane,K., Yasumoto,K., Yata,K., #:B.subti.11:auth:Yoshida,K., Yoshikawa,H.F., Zumstein,E., Yoshikawa,H. and #:B.subti.11:auth:Danchin,A. #:B.subti.11:auth:Kunst,F., Ogasawara,N., Moszer,I., Albertini,A.M., Alloni,G., #:B.subti.11:auth:Azevedo,V., Bertero,M.G., Bessieres,P., Bolotin,A., Borchert,S #:B.subti.11:auth:., Borriss,R., Boursier,L., Brans,A., Braun,M., Brignell,S.C., #:B.subti.11:auth:Bron,S., Brouillet,S., Bruschi,C.V., Caldwell,B., Capuano,V., #:B.subti.11:title:Bacillus subtilis #:B.subti.11:name:Bacillus subtilis. #:B.subti.11:subsp: #:B.subti.11:strain: #:B.subti.11:atcc: #:B.subti.11:acs:Z99107 #:B.subti.11:auth:Carter,N.M., Choi,S.K., Codani,J.J., Connerton,I.F., Cummings #:B.subti.11:title:The complete genome sequence of the Gram-positive bacterium #:B.subti.11:jour:Nature 390, 249-256 (1997) #:B.subti.11:who: #:B.subti.11:date:20-NOV-1997 #:B.subti.11:rem:ref:1 (bases 1 to 213190) #:B.subti.11:rem:ref:2 (bases 1 to 213190) #:B.subti.11:rem:auth:Kunst,F., Ogasawara,N., Yoshikawa,H. and Danchin,A. #:B.subti.11:rem:jour:Submitted (18-NOV-1997) I. Moszer, A. Danchin, Institut #:B.subti.11:rem:: Pasteur, Regulation de l'Expression Genetique, 28 rue du #:B.subti.11:rem:: Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail: #:B.subti.11:rem:: moszer@pasteur.fr, adanchin@pasteur.fr Phone: +33 (0)1 45 #:B.subti.11:rem:: 68 84 41, Fax: +33 (0)1 45 68 89 48 #:B.subti.11:rem:title:Direct Submission #:B.subti.11:rem:KEYWORDS:. #:B.subti.11:rem:GenBank ACCESSION:Z99107 #:B.subti.12:auth:Carter,N.M., Choi,S.K., Codani,J.J., Connerton,I.F., Cummings #:B.subti.12:auth:,N.J., Daniel,R.A., Denizot,F., Devine,K.M., Dusterhoft,A., #:B.subti.12:auth:Ehrlich,S.D., Emmerson,P.T., Entian,K.D., Errington,J., Fabret #:B.subti.12:auth:,C., Ferrari,E., Foulger,D., Fritz,C., Fujita,M., Fujita,Y., #:B.subti.12:auth:Fuma,S., Galizzi,A., Galleron,N., Ghim,S.Y., Glaser,P., #:B.subti.12:auth:Goffeau,A., Golightly,E.J., Grandi,G., Guiseppi,G., Guy,B.J., #:B.subti.12:auth:Haga,K., Haiech,J., Harwood,C.R., Henaut,A., Hilbert,H., #:B.subti.12:auth:Holsappel,S., Hosono,S., Hullo,M.F., Itaya,M., Jones,L., Joris #:B.subti.12:auth:,B., Karamata,D., Kasahara,Y., Klaerr-Blanchard,M., Klein,C., #:B.subti.12:auth:Kobayashi,Y., Koetter,P., Koningstein,G., Krogh,S., Kumano,M., #:B.subti.12:auth:Kurita,K., Lapidus,A., Lardinois,S., Lauber,J., Lazarevic,V., #:B.subti.12:auth:Lee,S.M., Levine,A., Liu,H., Masuda,S., Mauel,C., Medigue,C., #:B.subti.12:auth:Medina,N., Mellado,R.P., Mizuno,M., Moestl,D., Nakai,S., #:B.subti.12:auth:Noback,M., Noone,D., O'Reilly,M., Ogawa,K., Ogiwara,A., Oudega #:B.subti.12:auth:,B., Park,S.H., Parro,V., Pohl,T.M., Portetelle,D., Porwollik #:B.subti.12:auth:,S., Prescott,A.M., Presecan,E., Pujic,P., Purnelle,B., #:B.subti.12:auth:Rapoport,G., Rey,M., Reynolds,S., Rieger,M., Rivolta,C., Rocha #:B.subti.12:auth:,E., Roche,B., Rose,M., Sadaie,Y., Sato,T., Scanlan,E., #:B.subti.12:auth:Schleich,S., Schroeter,R., Scoffone,F., Sekiguchi,J., Sekowska #:B.subti.12:auth:,A., Seror,S.J., Serror,P., Shin,B.S., Soldo,B., Sorokin,A., #:B.subti.12:auth:Tacconi,E., Takagi,T., Takahashi,H., Takemaru,K., Takeuchi,M., #:B.subti.12:auth:Tamakoshi,A., Tanaka,T., Terpstra,P., Tognoni,A., Tosato,V., #:B.subti.12:auth:Uchiyama,S., Vandenbol,M., Vannier,F., Vassarotti,A., Viari,A., #:B.subti.12:auth:Wambutt,R., Wedler,E., Wedler,H., Weitzenegger,T., Winters,P., #:B.subti.12:auth:Wipat,A., Yamamoto,H., Yamane,K., Yasumoto,K., Yata,K., #:B.subti.12:auth:Yoshida,K., Yoshikawa,H.F., Zumstein,E., Yoshikawa,H. and #:B.subti.12:auth:Danchin,A. #:B.subti.12:auth:Kunst,F., Ogasawara,N., Moszer,I., Albertini,A.M., Alloni,G., #:B.subti.12:auth:Azevedo,V., Bertero,M.G., Bessieres,P., Bolotin,A., Borchert,S #:B.subti.12:auth:., Borriss,R., Boursier,L., Brans,A., Braun,M., Brignell,S.C., #:B.subti.12:title:The complete genome sequence of the Gram-positive bacterium #:B.subti.12:name:Bacillus subtilis. #:B.subti.12:subsp: #:B.subti.12:strain: #:B.subti.12:atcc: #:B.subti.12:acs:Z99108 #:B.subti.12:auth:Bron,S., Brouillet,S., Bruschi,C.V., Caldwell,B., Capuano,V., #:B.subti.12:title:Bacillus subtilis #:B.subti.12:jour:Nature 390, 249-256 (1997) #:B.subti.12:who: #:B.subti.12:date:20-NOV-1997 #:B.subti.12:rem:ref:1 (bases 1 to 208430) #:B.subti.12:rem:ref:2 (bases 1 to 208430) #:B.subti.12:rem:auth:Kunst,F., Ogasawara,N., Yoshikawa,H. and Danchin,A. #:B.subti.12:rem:jour:Submitted (18-NOV-1997) I. Moszer, A. Danchin, Institut #:B.subti.12:rem:: Pasteur, Regulation de l'Expression Genetique, 28 rue du #:B.subti.12:rem:: Docteur Roux, 75724 Paris Cedex 15, FRANCE. E-mail: #:B.subti.12:rem:: moszer@pasteur.fr, adanchin@pasteur.fr Phone: +33 (0)1 45 #:B.subti.12:rem:: 68 84 41, Fax: +33 (0)1 45 68 89 48 #:B.subti.12:rem:title:Direct Submission #:B.subti.12:rem:KEYWORDS:. #:B.subti.12:rem:GenBank ACCESSION:Z99108 #:L.monocy.1:name:Listeria monocytogenes #:L.monocy.1:subsp: #:L.monocy.1:strain: #:L.monocy.1:atcc: #:L.monocy.1:acs:X64533 #:L.monocy.1:auth: #:L.monocy.1:title: #:L.monocy.1:jour: #:L.monocy.1:who: #:L.monocy.1:date: #:L.monocy.1:rem:ID LM23SRDNA standard; DNA; PRO; 2928 BP. #:L.monocy.1:rem:XX #:L.monocy.1:rem:AC X64533; #:L.monocy.1:rem:XX #:L.monocy.1:rem:DT 22-SEP-1992 (Rel. 33, Created) #:L.monocy.1:rem:DT 22-SEP-1992 (Rel. 33, Last updated, Version 4) #:L.monocy.1:rem:XX #:L.monocy.1:rem:DE L.monocytogenes 23S ribosomal DNA #:L.monocy.1:rem:XX #:L.monocy.1:rem:KW 23S ribosomal RNA; ribosomal RNA. #:L.monocy.1:rem:XX #:L.monocy.1:rem:OS Listeria monocytogenes #:L.monocy.1:rem:OC Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods. #:L.monocy.1:rem:XX #:L.monocy.1:rem:RN [1] #:L.monocy.1:rem:RP 1-2928 #:L.monocy.1:rem:RA Balsdon J.T.; #:L.monocy.1:rem:RT ; #:L.monocy.1:rem:RL Submitted (19-FEB-1992) on tape to the EMBL Data Library by: #:L.monocy.1:rem:RL J.T. Balsdon, AFRC Inst of Food Res, Reading Laboratory, #:L.monocy.1:rem:RL Microbiology Department, Earley Gate, Whiteknights Road, Reading #:L.monocy.1:rem:RL RG6 2EF, UK #:L.monocy.1:rem:XX #:L.monocy.1:rem:RN [2] #:L.monocy.1:rem:RP 1-2928 #:L.monocy.1:rem:RA Thompson D.E., Balsdon J.T., Cai J., Collins M.D.; #:L.monocy.1:rem:RT "Studies on the ribosomal RNA operons of Listeria monocytogenes"; #:L.monocy.1:rem:RL FEMS Microbiol. Lett. 96:219-224(1992). #:L.monocy.1:rem:XX #:L.monocy.1:rem:CC *source: clone_library=genomic; #:L.monocy.1:rem:CC *source: clone=LM149; #:L.monocy.1:rem:XX #:L.monocy.1:rem:FH Key Location/Qualifiers #:L.monocy.1:rem:FH #:L.monocy.1:rem:FT rRNA 1..2928 #:L.monocy.1:rem:FT /product="23S ribosomal RNA" #:L.monocy.1:rem:XX #:L.monocy.1:rem:SQ Sequence 2928 BP; 819 A; 621 C; 898 G; 590 T; 0 other; #:L.monocy.2:name:Listeria monocytogenes #:L.monocy.2:subsp: #:L.monocy.2:strain: #:L.monocy.2:atcc: #:L.monocy.2:acs:X68420 #:L.monocy.2:auth: #:L.monocy.2:title: #:L.monocy.2:jour: #:L.monocy.2:who: #:L.monocy.2:date: #:L.monocy.2:rem:ID LM23SRRN standard; DNA; PRO; 2932 BP. #:L.monocy.2:rem:XX #:L.monocy.2:rem:AC X68420; #:L.monocy.2:rem:XX #:L.monocy.2:rem:DT 29-MAR-1993 (Rel. 35, Created) #:L.monocy.2:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:L.monocy.2:rem:XX #:L.monocy.2:rem:DE L.monocytogenes gene for 23S rRNA #:L.monocy.2:rem:XX #:L.monocy.2:rem:KW 23S ribosomal RNA. #:L.monocy.2:rem:XX #:L.monocy.2:rem:OS Listeria monocytogenes #:L.monocy.2:rem:OC Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods. #:L.monocy.2:rem:XX #:L.monocy.2:rem:RN [1] #:L.monocy.2:rem:RP 1-2932 #:L.monocy.2:rem:RA Ludwig W.; #:L.monocy.2:rem:RT ; #:L.monocy.2:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:L.monocy.2:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:L.monocy.2:rem:RL 8000 Muenchen 2, FRG #:L.monocy.2:rem:XX #:L.monocy.2:rem:RN [2] #:L.monocy.2:rem:RP 1-2932 #:L.monocy.2:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:L.monocy.2:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:L.monocy.2:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:L.monocy.2:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:L.monocy.2:rem:RT with a low DNA G+C content"; #:L.monocy.2:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:L.monocy.2:rem:XX #:L.monocy.2:rem:CC *source: strain=ATCC 19115; #:L.monocy.2:rem:XX #:L.monocy.2:rem:FH Key Location/Qualifiers #:L.monocy.2:rem:FH #:L.monocy.2:rem:FT rRNA 1..2932 #:L.monocy.2:rem:FT /product="23S ribosomal RNA" #:L.monocy.2:rem:XX #:L.monocy.2:rem:SQ Sequence 2932 BP; 789 A; 648 C; 899 G; 596 T; 0 other; #:L.monocy.3:auth:Sallen,B., Rajoharison,A., Desvarenne,S., Quinn,F. and #:L.monocy.3:title:Comparative Analysis of 16S and 23S Ribosomal RNA Sequences #:L.monocy.3:name:Listeria monocytogenes. #:L.monocy.3:subsp: #:L.monocy.3:strain: #:L.monocy.3:atcc: #:L.monocy.3:acs:X92951 #:L.monocy.3:auth:Mabilat,C. #:L.monocy.3:title:of Listeria Species #:L.monocy.3:jour:Unpublished #:L.monocy.3:who: #:L.monocy.3:date:31-MAR-1996 #:L.monocy.3:rem:ref:1 (bases 1 to 2660) #:L.monocy.3:rem:ref:2 (bases 1 to 2660) #:L.monocy.3:rem:auth:Mabilat,C. #:L.monocy.3:rem:jour:Submitted (09-NOV-1995) C. Mabilat, UMR 103 #:L.monocy.3:rem:: CNRS-bioMerieux, Sondes froides, ENS Lyon. 46, allee #:L.monocy.3:rem:: dItalie, F- 69007 Lyon, FRANCE #:L.monocy.3:rem:title:Direct Submission #:L.monocy.3:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.monocy.3:rem:GenBank ACCESSION:X92951 #:L.innocua:name:Listeria innocua. #:L.innocua:subsp: #:L.innocua:strain: #:L.innocua:atcc: #:L.innocua:acs:X92949 #:L.innocua:auth:Mabilat,C. #:L.innocua:title:of Listeria Species #:L.innocua:jour:Unpublished #:L.innocua:who: #:L.innocua:date:31-MAR-1996 #:L.innocua:auth:Sallen,B., Rajoharison,A., Desvarenne,S., Quinn,F. and #:L.innocua:title:Comparative Analysis of 16S and 23S Ribosomal RNA Sequences #:L.innocua:rem:ref:1 (bases 1 to 2666) #:L.innocua:rem:ref:2 (bases 1 to 2666) #:L.innocua:rem:auth:Mabilat,C. #:L.innocua:rem:jour:Submitted (09-NOV-1995) C. Mabilat, UMR 103 #:L.innocua:rem:: CNRS-bioMerieux, Sondes froides, ENS Lyon. 46, allee #:L.innocua:rem:: dItalie, F- 69007 Lyon, FRANCE #:L.innocua:rem:title:Direct Submission #:L.innocua:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.innocua:rem:GenBank ACCESSION:X92949 #:L.welshime:auth:Sallen,B., Rajoharison,A., Desvarenne,S., Quinn,F. and #:L.welshime:title:Comparative Analysis of 16S and 23S Ribosomal RNA Sequences #:L.welshime:name:Listeria welshimeri. #:L.welshime:subsp: #:L.welshime:strain: #:L.welshime:atcc: #:L.welshime:acs:X92954 #:L.welshime:auth:Mabilat,C. #:L.welshime:title:of Listeria Species #:L.welshime:jour:Unpublished #:L.welshime:who: #:L.welshime:date:31-MAR-1996 #:L.welshime:rem:ref:1 (bases 1 to 2666) #:L.welshime:rem:ref:2 (bases 1 to 2666) #:L.welshime:rem:auth:Mabilat,C. #:L.welshime:rem:jour:Submitted (09-NOV-1995) C. Mabilat, UMR 103 #:L.welshime:rem:: CNRS-bioMerieux, Sondes froides, ENS Lyon. 46, allee #:L.welshime:rem:: dItalie, F- 69007 Lyon, FRANCE #:L.welshime:rem:title:Direct Submission #:L.welshime:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.welshime:rem:GenBank ACCESSION:X92954 #:L.seeliger:auth:Sallen,B., Rajoharison,A., Desvarenne,S., Quinn,F. and #:L.seeliger:title:Comparative Analysis of 16S and 23S Ribosomal RNA Sequences #:L.seeliger:name:Listeria seeligeri. #:L.seeliger:subsp: #:L.seeliger:strain: #:L.seeliger:atcc: #:L.seeliger:acs:X92953 #:L.seeliger:auth:Mabilat,C. #:L.seeliger:title:of Listeria Species #:L.seeliger:jour:Unpublished #:L.seeliger:who: #:L.seeliger:date:31-MAR-1996 #:L.seeliger:rem:ref:1 (bases 1 to 2684) #:L.seeliger:rem:ref:2 (bases 1 to 2684) #:L.seeliger:rem:auth:Mabilat,C. #:L.seeliger:rem:jour:Submitted (09-NOV-1995) C. Mabilat, UMR 103 #:L.seeliger:rem:: CNRS-bioMerieux, Sondes froides, ENS Lyon. 46, allee #:L.seeliger:rem:: dItalie, F- 69007 Lyon, FRANCE #:L.seeliger:rem:title:Direct Submission #:L.seeliger:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.seeliger:rem:GenBank ACCESSION:X92953 #:L.ivanov.1:auth:Sallen,B., Rajoharison,A., Desvarenne,S., Quinn,F. and Mabilat #:L.ivanov.1:title:Comparative Analysis of 16S and 23S Ribosomal RNA Sequences #:L.ivanov.1:name:Listeria ivanovii. #:L.ivanov.1:subsp: #:L.ivanov.1:strain: #:L.ivanov.1:atcc: #:L.ivanov.1:acs:X92950 #:L.ivanov.1:auth:,C. #:L.ivanov.1:title:of Listeria Species #:L.ivanov.1:jour:Unpublished #:L.ivanov.1:who: #:L.ivanov.1:date:31-MAR-1996 #:L.ivanov.1:rem:ref:1 (bases 1 to 2648) #:L.ivanov.1:rem:ref:2 (bases 1 to 2648) #:L.ivanov.1:rem:auth:Mabilat,C. #:L.ivanov.1:rem:jour:Submitted (09-NOV-1995) C. Mabilat, UMR 103 #:L.ivanov.1:rem:: CNRS-bioMerieux, Sondes froides, ENS Lyon. 46, allee #:L.ivanov.1:rem:: dItalie, F- 69007 Lyon, FRANCE #:L.ivanov.1:rem:title:Direct Submission #:L.ivanov.1:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.ivanov.1:rem:GenBank ACCESSION:X92950 #:L.ivanov.2:title:ivanovii #:L.ivanov.2:auth:Engelbrecht,F., Dickneite,C., Lampidis,R., Goetz,M., DasGupta,U. #:L.ivanov.2:title:Sequence comparison of the chromosomal regions encompassing the #:L.ivanov.2:name:Listeria ivanovii. #:L.ivanov.2:subsp: #:L.ivanov.2:strain: #:L.ivanov.2:atcc: #:L.ivanov.2:acs:Y07639 #:L.ivanov.2:auth:and Goebel,W. #:L.ivanov.2:title:internalin C genes (inlC) of Listeria monocytogenes and L. #:L.ivanov.2:jour:Mol. Gen. Genet. 257, 1186-1197 (1998) #:L.ivanov.2:who: #:L.ivanov.2:date:09-FEB-1998 #:L.ivanov.2:rem:ref:1 (bases 1 to 5380) #:L.ivanov.2:rem:ref:2 (bases 1 to 5380) #:L.ivanov.2:rem:auth:Engelbrecht,F. #:L.ivanov.2:rem:jour:Submitted (22-AUG-1996) F. Engelbrecht, Universitaet #:L.ivanov.2:rem:: Wuerzburg, Institut Fuer Mikrobiologie, #:L.ivanov.2:rem:: Theodor-Boveri-Institut Fuer Biowissen-schaften, Lehrstuhl #:L.ivanov.2:rem:: Fuer Mikrobiologie, Am Hubland, 97074 Wuerzburg, FRG #:L.ivanov.2:rem:title:Direct Submission #:L.ivanov.2:rem:ref:3 (bases 1 to 5380) #:L.ivanov.2:rem:auth:Engelbrecht,F. #:L.ivanov.2:rem:jour:Submitted (02-APR-1997) F. Engelbrecht, Universitaet #:L.ivanov.2:rem:: Wuerzburg, Institut Fuer Mikrobiologie, #:L.ivanov.2:rem:: Theodor-Boveri-Institut Fuer Biowissen-schaften, Lehrstuhl #:L.ivanov.2:rem:: Fuer Mikrobiologie, Am Hubland, 97074 Wuerzburg, FRG #:L.ivanov.2:rem:title:Direct Submission #:L.ivanov.2:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA; 5S ribosomal RNA; 5S rRNA; #:L.ivanov.2:rem:: inlC gene; inlD gene; internalin C; internalin D; #:L.ivanov.2:rem:: leucine-rich repeat; ORFZ; protein binding site; #:L.ivanov.2:rem:: transcriptional activator; transcriptional repressor; #:L.ivanov.2:rem:: transfer RNA-Asn; transfer RNA-Thr; tRNA-Asn; tRNA-Thr. #:L.ivanov.2:rem:GenBank ACCESSION:Y07639 #:L.ivanov.2:rem:Related sequence X95822. #:L.grayi:name:Listeria grayi. #:L.grayi:subsp: #:L.grayi:strain: #:L.grayi:atcc: #:L.grayi:acs:X92948 #:L.grayi:auth:Sallen,B., Rajoharison,A., Desvarenne,S., Quinn,F. and #:L.grayi:title:Comparative Analysis of 16S and 23S Ribosomal RNA Sequences #:L.grayi:jour:Unpublished #:L.grayi:who: #:L.grayi:date:31-MAR-1996 #:L.grayi:auth:Mabilat,C. #:L.grayi:title:of Listeria Species #:L.grayi:rem:ref:1 (bases 1 to 2631) #:L.grayi:rem:ref:2 (bases 1 to 2631) #:L.grayi:rem:auth:Mabilat,C. #:L.grayi:rem:jour:Submitted (09-NOV-1995) C. Mabilat, UMR 103 #:L.grayi:rem:: CNRS-bioMerieux, Sondes froides, ENS Lyon. 46, allee #:L.grayi:rem:: dItalie, F- 69007 Lyon, FRANCE #:L.grayi:rem:title:Direct Submission #:L.grayi:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.grayi:rem:GenBank ACCESSION:X92948 #:L.murrayi:name:Listeria murrayi. #:L.murrayi:subsp: #:L.murrayi:strain: #:L.murrayi:atcc: #:L.murrayi:acs:X92952 #:L.murrayi:auth:,C. #:L.murrayi:title:of Listeria Species #:L.murrayi:jour:Unpublished #:L.murrayi:who: #:L.murrayi:date:31-MAR-1996 #:L.murrayi:auth:Sallen,B., Rajoharison,A., Desvarenne,S., Quinn,F. and Mabilat #:L.murrayi:title:Comparative Analysis of 16S and 23S Ribosomal RNA Sequences #:L.murrayi:rem:ref:1 (bases 1 to 2685) #:L.murrayi:rem:ref:2 (bases 1 to 2685) #:L.murrayi:rem:auth:Mabilat,C. #:L.murrayi:rem:jour:Submitted (09-NOV-1995) C. Mabilat, UMR 103 #:L.murrayi:rem:: CNRS-bioMerieux, Sondes froides, ENS Lyon. 46, allee #:L.murrayi:rem:: dItalie, F- 69007 Lyon, FRANCE #:L.murrayi:rem:title:Direct Submission #:L.murrayi:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.murrayi:rem:GenBank ACCESSION:X92952 #:W.confusa:name:Weissella confusa #:W.confusa:subsp:was Lactobacillus confusus #:W.confusa:strain: #:W.confusa:atcc: #:W.confusa:acs:S60375 #:W.confusa:auth: #:W.confusa:title: #:W.confusa:jour: #:W.confusa:who: #:W.confusa:date: #:W.confusa:rem:LOCUS S60375 2862 bp DNA BCT 16-JUL-1993 #:W.confusa:rem:DEFINITION 23S rRNA [Lactobacillus confusus, Genomic, 2862 nt] #:W.confusa:rem:ACCESSION S60375 #:W.confusa:rem:KEYWORDS . #:W.confusa:rem:SOURCE Lactobacillus confusus #:W.confusa:rem: ORGANISM Lactobacillus confusus #:W.confusa:rem: Unclassified. #:W.confusa:rem:REFERENCE 1 (bases 1 to 2862) #:W.confusa:rem: AUTHORS Martinez-Murcia,A.J., Harland,N.M. and Collins,M.D. #:W.confusa:rem: TITLE Phylogenetic analysis of some leuconostocs and related organisms as #:W.confusa:rem: determined from large-subunit rRNA gene sequences: assessment of #:W.confusa:rem: congruence of small- and large-subunit rRNA derived trees. #:W.confusa:rem: JOURNAL J. Appl. Bacteriol. 74, 532-541 (1993) #:W.confusa:rem: STANDARD full automatic #:W.confusa:rem:COMMENT #:W.confusa:rem: This entry [NCBI gibbsq 132132] was created by the journal scanning #:W.confusa:rem: component of NCBI/GenBank at the National Library of Medicine. #:W.confusa:rem: This sequence comes from Fig. 1. #:W.confusa:rem:FEATURES Location/Qualifiers #:W.confusa:rem: rRNA 1..2862 #:W.confusa:rem: /note="Description: 23S rRNA" #:W.confusa:rem: source 1..2862 #:W.confusa:rem: /organism="Lactobacillus confusus" #:W.confusa:rem:BASE COUNT 767 a 586 c 854 g 609 t 46 others #:W.confusa:rem:ORIGIN #:W.paramese:name:Weissella paramesenteroides #:W.paramese:subsp:was Leuconostoc paramesenteroides #:W.paramese:strain: #:W.paramese:atcc: #:W.paramese:acs:S60373 #:W.paramese:auth: #:W.paramese:title: #:W.paramese:jour: #:W.paramese:who: #:W.paramese:date: #:W.paramese:rem:LOCUS S60373 2863 bp DNA BCT 16-JUL-1993 #:W.paramese:rem:DEFINITION 23S rRNA [Leuconostoc paramesenteroides, Genomic, 2863 nt] #:W.paramese:rem:ACCESSION S60373 #:W.paramese:rem:KEYWORDS . #:W.paramese:rem:SOURCE Leuconostoc paramesenteroides #:W.paramese:rem: ORGANISM Leuconostoc paramesenteroides #:W.paramese:rem: Unclassified. #:W.paramese:rem:REFERENCE 1 (bases 1 to 2863) #:W.paramese:rem: AUTHORS Martinez-Murcia,A.J., Harland,N.M. and Collins,M.D. #:W.paramese:rem: TITLE Phylogenetic analysis of some leuconostocs and related organisms as #:W.paramese:rem: determined from large-subunit rRNA gene sequences: assessment of #:W.paramese:rem: congruence of small- and large-subunit rRNA derived trees. #:W.paramese:rem: JOURNAL J. Appl. Bacteriol. 74, 532-541 (1993) #:W.paramese:rem: STANDARD full automatic #:W.paramese:rem:COMMENT #:W.paramese:rem: This entry [NCBI gibbsq 132131] was created by the journal scanning #:W.paramese:rem: component of NCBI/GenBank at the National Library of Medicine. #:W.paramese:rem: This sequence comes from Fig. 1. #:W.paramese:rem:FEATURES Location/Qualifiers #:W.paramese:rem: rRNA 1..2863 #:W.paramese:rem: /note="Description: 23S rRNA" #:W.paramese:rem: source 1..2863 #:W.paramese:rem: /organism="Leuconostoc paramesenteroides" #:W.paramese:rem:BASE COUNT 793 a 601 c 863 g 601 t 5 others #:W.paramese:rem:ORIGIN #:O.oeni:name:Oenococcus oeni #:O.oeni:subsp:was Leuconostoc oenos #:O.oeni:strain: #:O.oeni:atcc: #:O.oeni:acs:S60377 #:O.oeni:auth: #:O.oeni:title: #:O.oeni:jour: #:O.oeni:who: #:O.oeni:date: #:O.oeni:rem:LOCUS S60377 2838 bp DNA BCT 16-JUL-1993 #:O.oeni:rem:DEFINITION 23S rRNA [Leuconostoc oenos, Genomic, 2838 nt] #:O.oeni:rem:ACCESSION S60377 #:O.oeni:rem:KEYWORDS . #:O.oeni:rem:SOURCE Leuconostoc oenos #:O.oeni:rem: ORGANISM Leuconostoc oenos #:O.oeni:rem: Unclassified. #:O.oeni:rem:REFERENCE 1 (bases 1 to 2838) #:O.oeni:rem: AUTHORS Martinez-Murcia,A.J., Harland,N.M. and Collins,M.D. #:O.oeni:rem: TITLE Phylogenetic analysis of some leuconostocs and related organisms as #:O.oeni:rem: determined from large-subunit rRNA gene sequences: assessment of #:O.oeni:rem: congruence of small- and large-subunit rRNA derived trees. #:O.oeni:rem: JOURNAL J. Appl. Bacteriol. 74, 532-541 (1993) #:O.oeni:rem: STANDARD full automatic #:O.oeni:rem:COMMENT #:O.oeni:rem: This entry [NCBI gibbsq 132133] was created by the journal scanning #:O.oeni:rem: component of NCBI/GenBank at the National Library of Medicine. #:O.oeni:rem: This sequence comes from Fig. 1. #:O.oeni:rem:FEATURES Location/Qualifiers #:O.oeni:rem: rRNA 1..2838 #:O.oeni:rem: /note="Description: 23S rRNA" #:O.oeni:rem: source 1..2838 #:O.oeni:rem: /organism="Leuconostoc oenos" #:O.oeni:rem:BASE COUNT 821 a 558 c 811 g 647 t 1 others #:O.oeni:rem:ORIGIN #:L.mesent.1:name:Leuconostoc mesenteroides #:L.mesent.1:subsp: #:L.mesent.1:strain: #:L.mesent.1:atcc: #:L.mesent.1:acs:S60370 #:L.mesent.1:auth: #:L.mesent.1:title: #:L.mesent.1:jour: #:L.mesent.1:who: #:L.mesent.1:date: #:L.mesent.1:rem:LOCUS S60370 2863 bp DNA BCT 16-JUL-1993 #:L.mesent.1:rem:DEFINITION 23S rRNA [Leuconostoc mesenteroides, Genomic, 2863 nt] #:L.mesent.1:rem:ACCESSION S60370 #:L.mesent.1:rem:KEYWORDS . #:L.mesent.1:rem:SOURCE Leuconostoc mesenteroides #:L.mesent.1:rem: ORGANISM Leuconostoc mesenteroides #:L.mesent.1:rem: Unclassified. #:L.mesent.1:rem:REFERENCE 1 (bases 1 to 2863) #:L.mesent.1:rem: AUTHORS Martinez-Murcia,A.J., Harland,N.M. and Collins,M.D. #:L.mesent.1:rem: TITLE Phylogenetic analysis of some leuconostocs and related organisms as #:L.mesent.1:rem: determined from large-subunit rRNA gene sequences: assessment of #:L.mesent.1:rem: congruence of small- and large-subunit rRNA derived trees. #:L.mesent.1:rem: JOURNAL J. Appl. Bacteriol. 74, 532-541 (1993) #:L.mesent.1:rem: STANDARD full automatic #:L.mesent.1:rem:COMMENT #:L.mesent.1:rem: This entry [NCBI gibbsq 132129] was created by the journal scanning #:L.mesent.1:rem: component of NCBI/GenBank at the National Library of Medicine. #:L.mesent.1:rem: This sequence comes from Fig. 1. #:L.mesent.1:rem:FEATURES Location/Qualifiers #:L.mesent.1:rem: rRNA 1..2863 #:L.mesent.1:rem: /note="Description: 23S rRNA" #:L.mesent.1:rem: source 1..2863 #:L.mesent.1:rem: /organism="Leuconostoc mesenteroides" #:L.mesent.1:rem:BASE COUNT 823 a 579 c 843 g 614 t 4 others #:L.mesent.1:rem:ORIGIN #:L.mesent.2:title:spacers in Leuconostoc: primary and secondary structure #:L.mesent.2:name:Leuconostoc mesenteroides. #:L.mesent.2:subsp: #:L.mesent.2:strain: #:L.mesent.2:atcc: #:L.mesent.2:acs:Z75487 #:L.mesent.2:auth:Nour,M. and Branlant,C. #:L.mesent.2:title:A comparative analysis of 23S ribosomal RNA and intergenic #:L.mesent.2:jour:Unpublished #:L.mesent.2:who: #:L.mesent.2:date:08-JAN-1997 #:L.mesent.2:rem:ref:1 (bases 1 to 2916) #:L.mesent.2:rem:ref:2 (bases 1 to 2916) #:L.mesent.2:rem:auth:Nour,M. #:L.mesent.2:rem:jour:Submitted (20-JUN-1996) M. Nour, Laboratoire #:L.mesent.2:rem:: d'Enzymologie et de Genie, Genetique URA CNRS, 457 Bld des #:L.mesent.2:rem:: Aiguillettes, BP 239 Faculte des Sciences, 54506 #:L.mesent.2:rem:: Vandoeuvere-Les-Nancy CEDEX, FRANCE #:L.mesent.2:rem:title:Direct Submission #:L.mesent.2:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.mesent.2:rem:GenBank ACCESSION:Z75487 #:L.mes.dext:title:A comparative analysis of 23S ribosomal RNA and intergenic #:L.mes.dext:name:Leuconostoc mesenteroides dextranicum. #:L.mes.dext:subsp: #:L.mes.dext:strain: #:L.mes.dext:atcc: #:L.mes.dext:acs:Z75490 #:L.mes.dext:auth:Nour,M. and Branlant,C. #:L.mes.dext:title:spacers in Leuconostoc: primary and secondary structure #:L.mes.dext:jour:Unpublished #:L.mes.dext:who: #:L.mes.dext:date:08-JAN-1997 #:L.mes.dext:rem:ref:1 (bases 1 to 2916) #:L.mes.dext:rem:ref:2 (bases 1 to 2916) #:L.mes.dext:rem:auth:Nour,M. #:L.mes.dext:rem:jour:Submitted (20-JUN-1996) M. Nour, Laboratoire #:L.mes.dext:rem:: d'Enzymologie et de Genie, Genetique URA CNRS, 457 Bld des #:L.mes.dext:rem:: Aiguillettes, BP 239 Faculte des Sciences, 54506 #:L.mes.dext:rem:: Vandoeuvere-Les-Nancy CEDEX, FRANCE #:L.mes.dext:rem:title:Direct Submission #:L.mes.dext:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:L.mes.dext:rem:GenBank ACCESSION:Z75490 #:L.carnosum:name:Leuconostoc carnosum #:L.carnosum:subsp: #:L.carnosum:strain: #:L.carnosum:atcc: #:L.carnosum:acs:S60371 #:L.carnosum:auth: #:L.carnosum:title: #:L.carnosum:jour: #:L.carnosum:who: #:L.carnosum:date: #:L.carnosum:rem:LOCUS S60371 2866 bp DNA BCT 16-JUL-1993 #:L.carnosum:rem:DEFINITION 23S rRNA [Leuconostoc carnosum, Genomic, 2866 nt] #:L.carnosum:rem:ACCESSION S60371 #:L.carnosum:rem:KEYWORDS . #:L.carnosum:rem:SOURCE Leuconostoc carnosum #:L.carnosum:rem: ORGANISM Leuconostoc carnosum #:L.carnosum:rem: Unclassified. #:L.carnosum:rem:REFERENCE 1 (bases 1 to 2866) #:L.carnosum:rem: AUTHORS Martinez-Murcia,A.J., Harland,N.M. and Collins,M.D. #:L.carnosum:rem: TITLE Phylogenetic analysis of some leuconostocs and related organisms as #:L.carnosum:rem: determined from large-subunit rRNA gene sequences: assessment of #:L.carnosum:rem: congruence of small- and large-subunit rRNA derived trees. #:L.carnosum:rem: JOURNAL J. Appl. Bacteriol. 74, 532-541 (1993) #:L.carnosum:rem: STANDARD full automatic #:L.carnosum:rem:COMMENT #:L.carnosum:rem: This entry [NCBI gibbsq 132130] was created by the journal scanning #:L.carnosum:rem: component of NCBI/GenBank at the National Library of Medicine. #:L.carnosum:rem: This sequence comes from Fig. 1. #:L.carnosum:rem:FEATURES Location/Qualifiers #:L.carnosum:rem: rRNA 1..2866 #:L.carnosum:rem: /note="Description: 23S rRNA" #:L.carnosum:rem: source 1..2866 #:L.carnosum:rem: /organism="Leuconostoc carnosum" #:L.carnosum:rem:BASE COUNT 820 a 564 c 833 g 612 t 37 others #:L.carnosum:rem:ORIGIN #:Leu.lactis:name:Leuconostoc lactis. #:Leu.lactis:subsp: #:Leu.lactis:strain: #:Leu.lactis:atcc: #:Leu.lactis:acs:Z75491 #:Leu.lactis:auth:Nour,M. and Branlant,C. #:Leu.lactis:title:A comparative analysis of 23S ribosomal RNA and intergenic #:Leu.lactis:jour:Unpublished #:Leu.lactis:who: #:Leu.lactis:date:08-JAN-1997 #:Leu.lactis:title:spacers in Leuconostoc: primary and secondary structure #:Leu.lactis:rem:ref:1 (bases 1 to 2916) #:Leu.lactis:rem:ref:2 (bases 1 to 2916) #:Leu.lactis:rem:auth:Nour,M. #:Leu.lactis:rem:jour:Submitted (20-JUN-1996) M. Nour, Laboratoire #:Leu.lactis:rem:: d'Enzymologie et de Genie, Genetique URA CNRS, 457 Bld des #:Leu.lactis:rem:: Aiguillettes, BP 239 Faculte des Sciences, 54506 #:Leu.lactis:rem:: Vandoeuvere-Les-Nancy CEDEX, FRANCE #:Leu.lactis:rem:title:Direct Submission #:Leu.lactis:rem:KEYWORDS:23S ribosomal RNA; 23S rRNA gene. #:Leu.lactis:rem:GenBank ACCESSION:Z75491 #:L.delbruec:name:Lactobacillus delbrueckii #:L.delbruec:subsp: #:L.delbruec:strain: #:L.delbruec:atcc: #:L.delbruec:acs:X68426 #:L.delbruec:auth: #:L.delbruec:title: #:L.delbruec:jour: #:L.delbruec:who: #:L.delbruec:date: #:L.delbruec:rem:ID LD23SRRN standard; DNA; PRO; 2909 BP. #:L.delbruec:rem:XX #:L.delbruec:rem:AC X68426; #:L.delbruec:rem:XX #:L.delbruec:rem:DT 29-MAR-1993 (Rel. 35, Created) #:L.delbruec:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:L.delbruec:rem:XX #:L.delbruec:rem:DE L.delbrueckii gene for 23S rRNA #:L.delbruec:rem:XX #:L.delbruec:rem:KW 23S ribosomal RNA. #:L.delbruec:rem:XX #:L.delbruec:rem:OS Lactobacillus delbrueckii #:L.delbruec:rem:OC Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods; #:L.delbruec:rem:OC Lactobacillaceae. #:L.delbruec:rem:XX #:L.delbruec:rem:RN [1] #:L.delbruec:rem:RP 1-2909 #:L.delbruec:rem:RA Ludwig W.; #:L.delbruec:rem:RT ; #:L.delbruec:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:L.delbruec:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:L.delbruec:rem:RL 8000 Muenchen 2, FRG #:L.delbruec:rem:XX #:L.delbruec:rem:RN [2] #:L.delbruec:rem:RP 1-2909 #:L.delbruec:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:L.delbruec:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:L.delbruec:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:L.delbruec:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:L.delbruec:rem:RT with a low DNA G+C content"; #:L.delbruec:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:L.delbruec:rem:XX #:L.delbruec:rem:CC *source: strain=11Lb1; #:L.delbruec:rem:XX #:L.delbruec:rem:FH Key Location/Qualifiers #:L.delbruec:rem:FH #:L.delbruec:rem:FT rRNA 1..2909 #:L.delbruec:rem:FT /product="23S ribosomal RNA" #:L.delbruec:rem:XX #:L.delbruec:rem:SQ Sequence 2909 BP; 810 A; 629 C; 908 G; 562 T; 0 other; #:L.lactis.1:name:Lactococcus lactis #:L.lactis.1:subsp: #:L.lactis.1:strain: #:L.lactis.1:atcc: #:L.lactis.1:acs:X64887 #:L.lactis.1:auth: #:L.lactis.1:title: #:L.lactis.1:jour: #:L.lactis.1:who: #:L.lactis.1:date: #:L.lactis.1:rem:LOCUS LACRRNAOP 5953 bp ds-DNA BCT 10-APR-1992 #:L.lactis.1:rem:DEFINITION L.lactis ribosomal RNA operon encoding 16S, 5S, and 23S ribosomal #:L.lactis.1:rem: RNA, transfer RNA-Ala and transfer RNA-Asn #:L.lactis.1:rem:ACCESSION X64887 #:L.lactis.1:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; #:L.lactis.1:rem: ribosomal RNA; ribosomal RNA operon; transfer RNA-ala; #:L.lactis.1:rem: transfer rna; transfer rna-asn. #:L.lactis.1:rem:SOURCE Lactococcus lactis DNA. #:L.lactis.1:rem: ORGANISM Lactococcus lactis #:L.lactis.1:rem: Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods; #:L.lactis.1:rem: Lactobacillaceae. #:L.lactis.1:rem:REFERENCE 1 (bases 1 to 5953) #:L.lactis.1:rem: AUTHORS Chiaruttini,C. and Milet,M. #:L.lactis.1:rem: TITLE Gene organization, primary structure and RNA processing analysis of #:L.lactis.1:rem: a ribsomal RNA operon in lactococcus lactis #:L.lactis.1:rem: JOURNAL Unpublished (1992) #:L.lactis.1:rem: STANDARD full automatic #:L.lactis.1:rem:COMMENT *source: strain=ssp. IL 1403; #:L.lactis.1:rem: From EMBL entry LLRRNAOP; dated 26-MAR-1992. #:L.lactis.1:rem:FEATURES Location/Qualifiers #:L.lactis.1:rem: promoter 324..329 #:L.lactis.1:rem: -10_signal 347..352 #:L.lactis.1:rem: prim_transcript 358..>5646 #:L.lactis.1:rem: rRNA 508..2055 #:L.lactis.1:rem: /product="16S ribosomal RNA" #:L.lactis.1:rem: tRNA 2149..2221 #:L.lactis.1:rem: /product="transfer RNA-Ala" #:L.lactis.1:rem: rRNA 2360..5257 #:L.lactis.1:rem: /product="23S ribosomal RNA" #:L.lactis.1:rem: rRNA 5341..5451 #:L.lactis.1:rem: /product="5S ribosomal RNA" #:L.lactis.1:rem: tRNA 5573..5646 #:L.lactis.1:rem: /product="transfer RNA-Asn" #:L.lactis.1:rem:BASE COUNT 1771 a 1138 c 1632 g 1412 t #:L.lactis.1:rem:ORIGIN #:L.lactis.2:name:Lactococcus lactis #:L.lactis.2:subsp: #:L.lactis.2:strain: #:L.lactis.2:atcc: #:L.lactis.2:acs:X68434 #:L.lactis.2:auth: #:L.lactis.2:title: #:L.lactis.2:jour: #:L.lactis.2:who: #:L.lactis.2:date: #:L.lactis.2:rem:ID LL23SRNA1 standard; DNA; PRO; 2901 BP. #:L.lactis.2:rem:XX #:L.lactis.2:rem:AC X68434; #:L.lactis.2:rem:XX #:L.lactis.2:rem:DT 29-MAR-1993 (Rel. 35, Created) #:L.lactis.2:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:L.lactis.2:rem:XX #:L.lactis.2:rem:DE L.lactis (DSM 20069) gene for 23S rRNA #:L.lactis.2:rem:XX #:L.lactis.2:rem:KW 23S ribosomal RNA. #:L.lactis.2:rem:XX #:L.lactis.2:rem:OS Lactococcus lactis #:L.lactis.2:rem:OC Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods; #:L.lactis.2:rem:OC Lactobacillaceae. #:L.lactis.2:rem:XX #:L.lactis.2:rem:RN [1] #:L.lactis.2:rem:RP 1-2901 #:L.lactis.2:rem:RA Ludwig W.; #:L.lactis.2:rem:RT ; #:L.lactis.2:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:L.lactis.2:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:L.lactis.2:rem:RL 8000 Muenchen 2, FRG #:L.lactis.2:rem:XX #:L.lactis.2:rem:RN [3] #:L.lactis.2:rem:RP 1-2901 #:L.lactis.2:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:L.lactis.2:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:L.lactis.2:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:L.lactis.2:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:L.lactis.2:rem:RT with a low DNA G+C content"; #:L.lactis.2:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:L.lactis.2:rem:XX #:L.lactis.2:rem:CC *source: strain=DSM 20069; #:L.lactis.2:rem:XX #:L.lactis.2:rem:FH Key Location/Qualifiers #:L.lactis.2:rem:FH #:L.lactis.2:rem:FT rRNA 1..2901 #:L.lactis.2:rem:FT /gene="23S rRNA" #:L.lactis.2:rem:FT /product="23S rRNA" #:L.lactis.2:rem:XX #:L.lactis.2:rem:SQ Sequence 2901 BP; 825 A; 587 C; 855 G; 634 T; 0 other; #:L.lactis.3:name:Lactococcus lactis #:L.lactis.3:subsp: #:L.lactis.3:strain: #:L.lactis.3:atcc: #:L.lactis.3:acs:X68435 #:L.lactis.3:auth: #:L.lactis.3:title: #:L.lactis.3:jour: #:L.lactis.3:who: #:L.lactis.3:date: #:L.lactis.3:rem:ID LL23SRNA2 standard; DNA; PRO; 2901 BP. #:L.lactis.3:rem:XX #:L.lactis.3:rem:AC X68435; #:L.lactis.3:rem:XX #:L.lactis.3:rem:DT 29-MAR-1993 (Rel. 35, Created) #:L.lactis.3:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:L.lactis.3:rem:XX #:L.lactis.3:rem:DE L.lactis (DSM 20481) gene for 23S rRNA #:L.lactis.3:rem:XX #:L.lactis.3:rem:KW 23S ribosomal RNA. #:L.lactis.3:rem:XX #:L.lactis.3:rem:OS Lactococcus lactis #:L.lactis.3:rem:OC Prokaryota; Bacteria; Firmicutes; Regular asporogenous rods; #:L.lactis.3:rem:OC Lactobacillaceae. #:L.lactis.3:rem:XX #:L.lactis.3:rem:RN [1] #:L.lactis.3:rem:RP 1-2901 #:L.lactis.3:rem:RA Ludwig W.; #:L.lactis.3:rem:RT ; #:L.lactis.3:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:L.lactis.3:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:L.lactis.3:rem:RL 8000 Muenchen 2, FRG #:L.lactis.3:rem:XX #:L.lactis.3:rem:RN [3] #:L.lactis.3:rem:RP 1-2901 #:L.lactis.3:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:L.lactis.3:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:L.lactis.3:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:L.lactis.3:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:L.lactis.3:rem:RT with a low DNA G+C content"; #:L.lactis.3:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:L.lactis.3:rem:XX #:L.lactis.3:rem:CC *source: strain=ssp.lactis, strain DSM 20481; #:L.lactis.3:rem:XX #:L.lactis.3:rem:FH Key Location/Qualifiers #:L.lactis.3:rem:FH #:L.lactis.3:rem:FT rRNA 1..2901 #:L.lactis.3:rem:FT /gene="23S rRNA" #:L.lactis.3:rem:FT /product="23S rRNA" #:L.lactis.3:rem:XX #:L.lactis.3:rem:SQ Sequence 2901 BP; 827 A; 585 C; 854 G; 635 T; 0 other; #:S.uberis:name:Streptococcus uberis #:S.uberis:subsp: #:S.uberis:strain: #:S.uberis:atcc: #:S.uberis:acs:X68038; S60799 #:S.uberis:auth: #:S.uberis:title: #:S.uberis:jour: #:S.uberis:who: #:S.uberis:date: #:S.uberis:rem:ID SU23SRRN standard; DNA; PRO; 2898 BP. #:S.uberis:rem:XX #:S.uberis:rem:AC X68038; S60799; #:S.uberis:rem:XX #:S.uberis:rem:DT 03-DEC-1993 (Rel. 38, Created) #:S.uberis:rem:DT 03-DEC-1993 (Rel. 38, Last updated, Version 2) #:S.uberis:rem:XX #:S.uberis:rem:DE S.uberis gene for 23S rRNA #:S.uberis:rem:XX #:S.uberis:rem:KW 23S ribosomal RNA; ribosomal RNA. #:S.uberis:rem:XX #:S.uberis:rem:OS Streptococcus uberis #:S.uberis:rem:OC Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:S.uberis:rem:OC Streptococcaceae. #:S.uberis:rem:XX #:S.uberis:rem:RN [1] #:S.uberis:rem:RP 1-2898 #:S.uberis:rem:RA Harland N.M.; #:S.uberis:rem:RT ; #:S.uberis:rem:RL Submitted (12-AUG-1992) to the EMBL/GenBank/DDBJ databases. #:S.uberis:rem:RL N.M. Harland, AFRC Inst of Food Research, Reading Lab/Microbiology #:S.uberis:rem:RL Dept, Earley Gate, Whiteknights Rd, Reading RG6 2EF, UK #:S.uberis:rem:XX #:S.uberis:rem:RN [2] #:S.uberis:rem:RA Harland N.M., Leigh J.A., Collins M.D.; #:S.uberis:rem:RT "Development of gene probes for the specific identification of #:S.uberis:rem:RT Streptococcus uberis and Streptococcus parauberis based upon large #:S.uberis:rem:RT subunit rRNA gene sequences."; #:S.uberis:rem:RL J. Appl. Bacteriol. 74:526-531(1993). #:S.uberis:rem:XX #:S.uberis:rem:FH Key Location/Qualifiers #:S.uberis:rem:FH #:S.uberis:rem:FT source 1..2898 #:S.uberis:rem:FT /organism="Streptococcus uberis" #:S.uberis:rem:FT /strain="NCDO 2038" #:S.uberis:rem:FT rRNA 1..2898 #:S.uberis:rem:FT /product="23S ribosomal RNA" #:S.uberis:rem:XX #:S.uberis:rem:SQ Sequence 2898 BP; 815 A; 589 C; 866 G; 625 T; 3 other; #:S.thermoph:name:Streptococcus thermophilus #:S.thermoph:subsp: #:S.thermoph:strain: #:S.thermoph:atcc: #:S.thermoph:acs:X68429 #:S.thermoph:auth: #:S.thermoph:title: #:S.thermoph:jour: #:S.thermoph:who: #:S.thermoph:date: #:S.thermoph:rem:ID ST23SRRN standard; DNA; PRO; 2900 BP. #:S.thermoph:rem:XX #:S.thermoph:rem:AC X68429; #:S.thermoph:rem:XX #:S.thermoph:rem:DT 29-MAR-1993 (Rel. 35, Created) #:S.thermoph:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:S.thermoph:rem:XX #:S.thermoph:rem:DE S.thermophilus for 23S rRNA #:S.thermoph:rem:XX #:S.thermoph:rem:KW 23S ribosomal RNA. #:S.thermoph:rem:XX #:S.thermoph:rem:OS Streptococcus thermophilus #:S.thermoph:rem:OC Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:S.thermoph:rem:OC Streptococcaceae. #:S.thermoph:rem:XX #:S.thermoph:rem:RN [1] #:S.thermoph:rem:RP 1-2900 #:S.thermoph:rem:RA Ludwig W.; #:S.thermoph:rem:RT ; #:S.thermoph:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:S.thermoph:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:S.thermoph:rem:RL 8000 Muenchen 2, FRG #:S.thermoph:rem:XX #:S.thermoph:rem:RN [2] #:S.thermoph:rem:RP 1-2900 #:S.thermoph:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:S.thermoph:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:S.thermoph:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:S.thermoph:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:S.thermoph:rem:RT with a low DNA G+C content"; #:S.thermoph:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:S.thermoph:rem:XX #:S.thermoph:rem:CC *source: strain=DSM 20617; #:S.thermoph:rem:XX #:S.thermoph:rem:FH Key Location/Qualifiers #:S.thermoph:rem:FH #:S.thermoph:rem:FT rRNA 1..2900 #:S.thermoph:rem:FT /product="23S ribosomal RNA" #:S.thermoph:rem:XX #:S.thermoph:rem:SQ Sequence 2900 BP; 815 A; 585 C; 862 G; 638 T; 0 other; #:S.oralis:name:Streptococcus oralis #:S.oralis:subsp: #:S.oralis:strain: #:S.oralis:atcc: #:S.oralis:acs:X68427 #:S.oralis:auth: #:S.oralis:title: #:S.oralis:jour: #:S.oralis:who: #:S.oralis:date: #:S.oralis:rem:ID SO23SRRN standard; DNA; PRO; 2902 BP. #:S.oralis:rem:XX #:S.oralis:rem:AC X68427; #:S.oralis:rem:XX #:S.oralis:rem:DT 29-MAR-1993 (Rel. 35, Created) #:S.oralis:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:S.oralis:rem:XX #:S.oralis:rem:DE S.oralis gene for 23S rRNA #:S.oralis:rem:XX #:S.oralis:rem:KW 23S ribosomal RNA. #:S.oralis:rem:XX #:S.oralis:rem:OS Streptococcus oralis #:S.oralis:rem:OC Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:S.oralis:rem:OC Streptococcaceae. #:S.oralis:rem:XX #:S.oralis:rem:RN [1] #:S.oralis:rem:RP 1-2902 #:S.oralis:rem:RA Ludwig W.; #:S.oralis:rem:RT ; #:S.oralis:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:S.oralis:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:S.oralis:rem:RL 8000 Muenchen 2, FRG #:S.oralis:rem:XX #:S.oralis:rem:RN [2] #:S.oralis:rem:RP 1-2902 #:S.oralis:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:S.oralis:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:S.oralis:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:S.oralis:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:S.oralis:rem:RT with a low DNA G+C content"; #:S.oralis:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:S.oralis:rem:XX #:S.oralis:rem:CC *source: strain=DSM 20066; #:S.oralis:rem:XX #:S.oralis:rem:FH Key Location/Qualifiers #:S.oralis:rem:FH #:S.oralis:rem:FT rRNA 1..2902 #:S.oralis:rem:FT /product="23S ribosomal RNA" #:S.oralis:rem:XX #:S.oralis:rem:SQ Sequence 2902 BP; 822 A; 584 C; 862 G; 634 T; 0 other; #:S.parauber:name:Streptococcus parauberis #:S.parauber:subsp: #:S.parauber:strain: #:S.parauber:atcc: #:S.parauber:acs:X68036; S60368 #:S.parauber:auth: #:S.parauber:title: #:S.parauber:jour: #:S.parauber:who: #:S.parauber:date: #:S.parauber:rem:ID SP23SRRN standard; DNA; PRO; 2901 BP. #:S.parauber:rem:XX #:S.parauber:rem:AC X68036; S60368; #:S.parauber:rem:XX #:S.parauber:rem:DT 01-DEC-1993 (Rel. 38, Created) #:S.parauber:rem:DT 01-DEC-1993 (Rel. 38, Last updated, Version 2) #:S.parauber:rem:XX #:S.parauber:rem:DE S.parauberis gene for 23S rRNA #:S.parauber:rem:XX #:S.parauber:rem:KW 23S ribosomal RNA; ribosomal RNA. #:S.parauber:rem:XX #:S.parauber:rem:OS Streptococcus parauberis #:S.parauber:rem:OC Prokaryota; Bacteria; Firmicutes; Gram-positive cocci; #:S.parauber:rem:OC Streptococcaceae. #:S.parauber:rem:XX #:S.parauber:rem:RN [1] #:S.parauber:rem:RP 1-2901 #:S.parauber:rem:RA Harland N.M.; #:S.parauber:rem:RT ; #:S.parauber:rem:RL Submitted (12-AUG-1992) to the EMBL/GenBank/DDBJ databases. #:S.parauber:rem:RL N.M. Harland, AFRC Inst of Food Research, Reading Lab/Microbiology #:S.parauber:rem:RL Dept, Earley Gate, Whiteknights Rd, Reading RG6 2EF, UK #:S.parauber:rem:XX #:S.parauber:rem:RN [2] #:S.parauber:rem:RA Harland N.M., Leigh J.A., Collins M.D.; #:S.parauber:rem:RT "Development of gene probes for the specific identification of #:S.parauber:rem:RT Streptococcus uberis and Streptococcus parauberis based upon large #:S.parauber:rem:RT subunit rRNA gene sequences."; #:S.parauber:rem:RL J. Appl. Bacteriol. 74:526-531(1993). #:S.parauber:rem:XX #:S.parauber:rem:FH Key Location/Qualifiers #:S.parauber:rem:FH #:S.parauber:rem:FT source 1..2901 #:S.parauber:rem:FT /organism="Streptococcus parauberis" #:S.parauber:rem:FT /strain="NCDO 2020" #:S.parauber:rem:FT rRNA 1..2901 #:S.parauber:rem:FT /product="23S ribosomal RNA" #:S.parauber:rem:XX #:S.parauber:rem:SQ Sequence 2901 BP; 830 A; 582 C; 852 G; 630 T; 7 other; #:S.macedoni:auth:Devriese,L.A., Kalantzopoulos,G., Schleifer,K.H. and Kersters #:S.macedoni:auth:,K. #:S.macedoni:title:Identification of streptococci from Greek Kasseri cheese and #:S.macedoni:name:Streptococcus macedonicus. #:S.macedoni:subsp: #:S.macedoni:strain: #:S.macedoni:atcc: #:S.macedoni:acs:Z94013 #:S.macedoni:auth:Tsakalidou,E., Zoidou,E., Pot,B., Wassill,L., Ludwig,W., #:S.macedoni:title:description of Streptococcus macedonicus sp. nov #:S.macedoni:jour:Int. J. Syst. Bacteriol. 48, 519-527 (1998) #:S.macedoni:who: #:S.macedoni:date:20-JUL-1998 #:S.macedoni:rem:ref:1 (bases 1 to 2902) #:S.macedoni:rem:ref:2 (bases 1 to 2902) #:S.macedoni:rem:auth:Ludwig,W. #:S.macedoni:rem:jour:Submitted (15-APR-1997) Ludwig W., Lehrstuhl fuer #:S.macedoni:rem:: Mikrobiologie, Technische Universitae Muenchen, Muenchen, #:S.macedoni:rem:: Germany #:S.macedoni:rem:title:Direct Submission #:S.macedoni:rem:KEYWORDS:16S ribosomal RNA; 16S rRNA gene. #:S.macedoni:rem:GenBank ACCESSION:Z94013 #:GRAM+.MYCO:name: #:GRAM+.MYCO:subsp: #:GRAM+.MYCO:strain: #:GRAM+.MYCO:atcc: #:GRAM+.MYCO:acs:DIVIDER #:GRAM+.MYCO:auth: #:GRAM+.MYCO:title: #:GRAM+.MYCO:jour: #:GRAM+.MYCO:who:Robin Gutell,MCDB-256,28595,7868901 #:GRAM+.MYCO:date:Fri Dec 17 17:54:21 1993 #:M.capricol:name:Mycoplasma capricolum #:M.capricol:subsp:PG50 #:M.capricol:strain: #:M.capricol:atcc:?(PG50) #:M.capricol:acs:X05075 #:M.capricol:auth: #:M.capricol:title: #:M.capricol:jour: #:M.capricol:who:published approx. 1985 #:M.capricol:date:Tue Feb 2 08:20:51 1988 #:M.genitali:name:Mycoplasma genitalium #:M.genitali:subsp: #:M.genitali:strain: #:M.genitali:atcc: #:M.genitali:acs:U39693, U39694 #:M.genitali:auth: #:M.genitali:title: #:M.genitali:jour: #:M.genitali:who: #:M.genitali:date: #:M.genitali:rem:LOCUS MGU39693 9199 bp DNA BCT 31-OCT-1995 #:M.genitali:rem:DEFINITION Mycoplasma genitalium rrnA 23S, rrnA 16S genes from bases 165403 to #:M.genitali:rem: 174601 of the complete genome. #:M.genitali:rem:ACCESSION U39693 L43967 #:M.genitali:rem:KEYWORDS complete genome; shotgun sequencing. #:M.genitali:rem:SOURCE Mycoplasma genitalium (individual_isolate G37) DNA. #:M.genitali:rem: ORGANISM Mycoplasma genitalium #:M.genitali:rem: Eubacteria; Firmicutes; Low G+C gram-positive bacteria; Mycoplasmas #:M.genitali:rem: and walled relatives; Mycoplasmatales; Mycoplasmataceae; #:M.genitali:rem: Mycoplasma. #:M.genitali:rem:REFERENCE 1 (bases 1 to 9199) #:M.genitali:rem: AUTHORS Fraser,C.M., Gocayne,J.D., White,O., Adams,M.D., Clayton,R.A., #:M.genitali:rem: Fleischmann,R.D., Bult,C.J., Kerlavage,A.R., Sutton,G., #:M.genitali:rem: Kelley,J.M., Fritchman,J.L., Weidman,J.F., Small,K.V., Sandusky,M., #:M.genitali:rem: Fuhrmann,J.L., Nguyen,D.T., Utterback,T.R., Saudek,D.M., #:M.genitali:rem: Phillips,C.A., Merrick,J.M., Tomb,J.-F., Dougherty,B.A., Bott,K.F., #:M.genitali:rem: Hu,P.-C., Lucier,T.S., Peterson,S.N., Smith,H.O., Hutchison,C.A. #:M.genitali:rem: III and Venter,J.C. #:M.genitali:rem: TITLE The minimal gene complement of Mycoplasma genitalium #:M.genitali:rem: JOURNAL Science 270 (5235), 397-403 (1995) #:M.genitali:rem:REFERENCE 2 (bases 1 to 9199) #:M.genitali:rem: AUTHORS Fraser,C.M., Gocayne,J.D., White,O., Adams,M.D., Clayton,R.A., #:M.genitali:rem: Fleischmann,R.D., Bult,C.J., Kerlavage,A.R., Sutton,G., #:M.genitali:rem: Kelley,J.M., Fritschman,J.L., Weidman,J.F., Small,K.V., #:M.genitali:rem: Sandusky,M., Fuhrmann,J.L., Nguyen,D.T., Utterback,T.R., #:M.genitali:rem: Saudek,D.M., Phillips,C.A., Merrick,J.M., Tomb,J.-F., #:M.genitali:rem: Dougherty,B.A., Bott,K.F., Hu,P.-C., Lucier,T.S., Peterson,S.N., #:M.genitali:rem: Smith,H.O., Hutchinson,C.A. III. and Venter,J.C. #:M.genitali:rem: TITLE Direct Submission #:M.genitali:rem: JOURNAL Submitted (30-OCT-1995) The Institute for Genomic Research, 9712 #:M.genitali:rem: Medical Center Drive, Rockville, MD 20850, USA #:M.genitali:rem:COMMENT #:M.genitali:rem: Address all correspondence to: #:M.genitali:rem: Claire M. Fraser #:M.genitali:rem: The Institute for Genomic Research, #:M.genitali:rem: 9712 Medical Center Drive, Rockville, MD #:M.genitali:rem: 20850 #:M.genitali:rem: All authors are with: #:M.genitali:rem: The Institute for Genomic Research, #:M.genitali:rem: 9712 Medical Center Drive, Rockville, MD, #:M.genitali:rem: 20850 #:M.genitali:rem: Except: #:M.genitali:rem: J.M. Merrick, Department of Microbiology, #:M.genitali:rem: State University of New York #:M.genitali:rem: at Buffalo, Buffalo, NY, USA #:M.genitali:rem: K.F. Bott, P.-C. Hu, T.S. Lucier, S.N. #:M.genitali:rem: Peterson, C.A. Hutchison, #:M.genitali:rem: University of North Carolina at Chapel Hill, #:M.genitali:rem: School of Medicine, #:M.genitali:rem: Chapel Hill, NC, 27599, USA #:M.genitali:rem: The coding potential of some predicted open #:M.genitali:rem: reading frames were determined using GeneMark #:M.genitali:rem: software, kindly supplied by Mark Borodovsky, #:M.genitali:rem: Georgia Institute of Technology, Atlanta, GA, #:M.genitali:rem: 30332. e-mail: mark@amber.gatech.edu #:M.genitali:rem: Submitted by: Claire M. Fraser #:M.genitali:rem: e-mail: cmfraser@tigr.org #:M.genitali:rem: Annotation: Owen White #:M.genitali:rem: e-mail: owhite@tigr.org #:M.genitali:rem: Biological role information, putative #:M.genitali:rem: identifications, sequence alignments, on-line name and sequence #:M.genitali:rem: search capability are available at #:M.genitali:rem: TIGR's World Wide Web site: #:M.genitali:rem: (URL: http://www.tigr.org/) #:M.genitali:rem: Records for each member of the set which constitute the #:M.genitali:rem: complete genome of Mycoplasma genitalium were derived by #:M.genitali:rem: splitting the original single 580 kb submission into #:M.genitali:rem: records of approximately 10 to 20 kb in size. Any #:M.genitali:rem: questions about this process can be directed to #:M.genitali:rem: GenBank/NCBI: info@ncbi.nlm.nih.gov. #:M.genitali:rem: NCBI gi: 1045820 #:M.genitali:rem:FEATURES Location/Qualifiers #:M.genitali:rem: source 1..9199 #:M.genitali:rem: /organism="Mycoplasma genitalium" #:M.genitali:rem: /isolate="G37" #:M.genitali:rem: /sequenced_mol="DNA" #:M.genitali:rem: CDS 68..1777 #:M.genitali:rem: /standard_name="MG139" #:M.genitali:rem: /note="identified by sequence similarity; similar to #:M.genitali:rem: GB:L18927 {Buchnera aphidicola} percent identity: 28.6; #:M.genitali:rem: putative; NCBI gi: 1045821" #:M.genitali:rem: /codon_start=1 #:M.genitali:rem: /transl_table=4 #:M.genitali:rem: /product="hypothetical protein (GB:L18927_2)" #:M.genitali:rem: /translation="MIKDFNPGDFIGKKPTKIYAFGGIQEVGKNMYGIEYDDEIIIID #:M.genitali:rem: CGIKFASDDLLGINGIIPSFEHLIENQSKVKALFITHGHEDHIGGVPYLLKQVDIPVI #:M.genitali:rem: YAPRIAASLILKKVNEHKDAKLNKIVTFDDFSEFQTKHFKIDFYRVNHSIPDAFGICV #:M.genitali:rem: QTPNGNIVQSGDYRFDFAAGSEMLDVHKVVKIAERNVHVFMSESTNAEVPGFSQSEKL #:M.genitali:rem: IYRNIQKILKEARGRVILTTFASNITRINEIIEIALNNKRKICLLGKSMDVNVNISRK #:M.genitali:rem: IGLMAIDSNDIVEVRDIKNYPDRNILILCTGSQGEEAAALNTMARGKHNWVSLKSTDT #:M.genitali:rem: IIMSSNPIPGNYAAVENLLNELSKFGVAIYENSSQLKLHASGHATQQELQLMLNLMFP #:M.genitali:rem: KYLIPIHGEFKMMRTIKNIANECGIKSEDVALLSNGQVMYLIDEELYYSNEIINADPI #:M.genitali:rem: YIESHNSSPDLARIIKQRQILSRDGMFAVIVVFDKNNNIIGIPTLITRGCFFALDSNP #:M.genitali:rem: LMTKIAHSVKRTLESVIQSKKFNSHEQLTKELKRVCKETVSYFIWKNKNRNPLISTVL #:M.genitali:rem: SWI" #:M.genitali:rem: rRNA 4607..6125 #:M.genitali:rem: /gene="rrnA 16S" #:M.genitali:rem: /note="putative" #:M.genitali:rem: /product="16S rRNA" #:M.genitali:rem: rRNA complement(6328..9061) #:M.genitali:rem: /gene="rrnA 23S" #:M.genitali:rem: /note="putative" #:M.genitali:rem: /product="23S rRNA" #:M.genitali:rem:BASE COUNT 2906 a 1664 c 2101 g 2528 t #:M.genitali:rem:ORIGIN #:M.pneumoni:name:Mycoplasma pneumoniae #:M.pneumoni:subsp: #:M.pneumoni:strain: #:M.pneumoni:atcc: #:M.pneumoni:acs:X68422,U00089 #:M.pneumoni:auth: #:M.pneumoni:title: #:M.pneumoni:jour: #:M.pneumoni:who: #:M.pneumoni:date: #:M.pneumoni:rem:ID MP23SRRN standard; DNA; PRO; 2905 BP. #:M.pneumoni:rem:XX #:M.pneumoni:rem:AC X68422; #:M.pneumoni:rem:XX #:M.pneumoni:rem:DT 29-MAR-1993 (Rel. 35, Created) #:M.pneumoni:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:M.pneumoni:rem:XX #:M.pneumoni:rem:DE M.pneumoniae gene for 23S rRNA #:M.pneumoni:rem:XX #:M.pneumoni:rem:KW 23S ribosomal RNA. #:M.pneumoni:rem:XX #:M.pneumoni:rem:OS Mycoplasma pneumoniae #:M.pneumoni:rem:OC Prokaryota; Bacteria; Tenericutes; Mollicutes; Mycoplasmas; #:M.pneumoni:rem:OC Mycoplasmatales; Mycoplasmataceae. #:M.pneumoni:rem:XX #:M.pneumoni:rem:RN [1] #:M.pneumoni:rem:RP 1-2905 #:M.pneumoni:rem:RA Ludwig W.; #:M.pneumoni:rem:RT ; #:M.pneumoni:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:M.pneumoni:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:M.pneumoni:rem:RL 8000 Muenchen 2, FRG #:M.pneumoni:rem:XX #:M.pneumoni:rem:RN [2] #:M.pneumoni:rem:RP 1-2905 #:M.pneumoni:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:M.pneumoni:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:M.pneumoni:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:M.pneumoni:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:M.pneumoni:rem:RT with a low DNA G+C content"; #:M.pneumoni:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:M.pneumoni:rem:XX #:M.pneumoni:rem:FH Key Location/Qualifiers #:M.pneumoni:rem:FH #:M.pneumoni:rem:FT rRNA 1..2905 #:M.pneumoni:rem:FT /product="23S ribosomal RNA" #:M.pneumoni:rem:XX #:M.pneumoni:rem:SQ Sequence 2905 BP; 865 A; 516 C; 806 G; 718 T; 0 other; #:M.gallis.1:name:Mycoplasma gallisepticum #:M.gallis.1:subsp: #:M.gallis.1:strain: #:M.gallis.1:atcc: #:M.gallis.1:acs:L08897 #:M.gallis.1:auth: #:M.gallis.1:title: #:M.gallis.1:jour: #:M.gallis.1:who: #:M.gallis.1:date: #:M.gallis.1:rem:LOCUS MYCRRSA 6663 bp ds-DNA BCT 16-AUG-1994 #:M.gallis.1:rem:DEFINITION Mycoplasma gallisepticum (strain A5969) 16S-, 23S-, 5S ribosomal #:M.gallis.1:rem: RNA (rrsA, rrlA, rrfA) genes. #:M.gallis.1:rem:ACCESSION L08897 #:M.gallis.1:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA; #:M.gallis.1:rem: ribosomal RNA. #:M.gallis.1:rem:SOURCE Mycoplasma gallisepticum (sub_strain variant B, strain A5969) #:M.gallis.1:rem: (library: genomic library lambda EMBL-3A) DNA. #:M.gallis.1:rem: ORGANISM Mycoplasma gallisepticum #:M.gallis.1:rem: Prokaryotae; Tenericutes; Mollicutes; Mycoplasmas; Mycoplasmatales; #:M.gallis.1:rem: Mycoplasmataceae. #:M.gallis.1:rem:REFERENCE 1 (bases 1 to 6663) #:M.gallis.1:rem: AUTHORS Skamrov,A. and Beabealashvilli,R.S. #:M.gallis.1:rem: TITLE Mycoplasma Gallisepticum strain S6 contains three regions #:M.gallis.1:rem: hybridizing with 16S rRNA and two regions hybridizing with 23S and #:M.gallis.1:rem: 5S rRNA #:M.gallis.1:rem: JOURNAL FEBS Lett. 291, 71-74 (1991) #:M.gallis.1:rem: STANDARD full automatic #:M.gallis.1:rem:REFERENCE 2 (bases 1 to 6663) #:M.gallis.1:rem: AUTHORS Scamrov,A., Goldman,M., Klassova,J., Feoktistova,E. and #:M.gallis.1:rem: Beabealashvilli,R.S. #:M.gallis.1:rem: TITLE Mycoplasma gallisepticum rRNA operon structure #:M.gallis.1:rem: JOURNAL Unpublished (1994) #:M.gallis.1:rem: STANDARD full automatic #:M.gallis.1:rem:REFERENCE 3 (bases 1 to 6663) #:M.gallis.1:rem: AUTHORS Scamrov,A., Klassova,J., Goldman,M., Feoktistova,E. and #:M.gallis.1:rem: Beabealashvilli,R.S. #:M.gallis.1:rem: TITLE Nucleotide sequence of rrnA operon of M. gallisepticum A5969 var. B #:M.gallis.1:rem: JOURNAL Unpublished (1994) #:M.gallis.1:rem: STANDARD full automatic #:M.gallis.1:rem:COMMENT #:M.gallis.1:rem: NCBI gi: 530152 #:M.gallis.1:rem:FEATURES Location/Qualifiers #:M.gallis.1:rem: source 1..6663 #:M.gallis.1:rem: /organism="Mycoplasma gallisepticum" #:M.gallis.1:rem: /sub_strain="variant B" #:M.gallis.1:rem: /strain="A5969" #:M.gallis.1:rem: /sequenced_mol="DNA" #:M.gallis.1:rem: /tissue_lib="genomic library lambda EMBL-3A" #:M.gallis.1:rem: CDS 3..500 #:M.gallis.1:rem: /partial #:M.gallis.1:rem: /note="putative; ORF; NCBI gi: 530153" #:M.gallis.1:rem: /codon_start=1 #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: /translation="IYWYVPLIAFSYSSIVYLLFGFGLNNIFLINLFNIQGADNLVVS #:M.gallis.1:rem: NLVLRITLVQSIFIALSMNAQLLFQSTQRIGMAWIASLMQGLFTFAPVFFTMYNLAID #:M.gallis.1:rem: TNNIYLYIWIQPINAILTCIGNWIISIPFAHKYREFVSKRFDIGTMLDKYLNKTKNPK #:M.gallis.1:rem: VKAKQ" #:M.gallis.1:rem: -35_signal 430..435 #:M.gallis.1:rem: /note="single mismatch of E.coli consensus sequence; #:M.gallis.1:rem: putative" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: -10_signal 453..458 #:M.gallis.1:rem: /note="single mismatch of E.coli consensus sequence; #:M.gallis.1:rem: putative" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: -35_signal 518..523 #:M.gallis.1:rem: /note="single mismatch of E.coli consensus sequence; #:M.gallis.1:rem: putative" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: -10_signal 539..544 #:M.gallis.1:rem: /note="putative" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: repeat_unit 585..612 #:M.gallis.1:rem: /note="5' half of the stem structure bracketing 16S and #:M.gallis.1:rem: 23S ribosomal RNA.; putative" #:M.gallis.1:rem: /function="rRNA processing" #:M.gallis.1:rem: /rpt_type=direct #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: rRNA 619..2137 #:M.gallis.1:rem: /gene="rrsA" #:M.gallis.1:rem: /standard_name="16S rRNA" #:M.gallis.1:rem: /note="putative" #:M.gallis.1:rem: /function="ribosomal small subunit RNA" #:M.gallis.1:rem: /citation=[1] #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /product="16S ribosomal RNA" #:M.gallis.1:rem: repeat_unit 2256..2289 #:M.gallis.1:rem: /note="3' part of a stem bracketing 16S and 23S rRNA; #:M.gallis.1:rem: putative" #:M.gallis.1:rem: /function="rRNA processing" #:M.gallis.1:rem: /rpt_type=inverted #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: misc_signal complement(2373..2391) #:M.gallis.1:rem: /standard_name="boxA" #:M.gallis.1:rem: /note="GTTCTTT loop bracketed by a stem; putative" #:M.gallis.1:rem: /function="antitermination" #:M.gallis.1:rem: /label=boxA #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: stem_loop 2435..2493 #:M.gallis.1:rem: /note="Stem-loop followed by a row of T's; putative" #:M.gallis.1:rem: /function="putative transcription terminator" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: repeat_unit 2676..2706 #:M.gallis.1:rem: /note="5' half of a stem bracketing 16S and 23S rRNA; #:M.gallis.1:rem: putative" #:M.gallis.1:rem: /function="rRNA processing" #:M.gallis.1:rem: /rpt_type=direct #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: -35_signal 2724..2730 #:M.gallis.1:rem: -10_signal 2748..2753 #:M.gallis.1:rem: rRNA 2795..5696 #:M.gallis.1:rem: /gene="rrlA" #:M.gallis.1:rem: /standard_name="23S rRNA" #:M.gallis.1:rem: /note="putative" #:M.gallis.1:rem: /function="ribosomal large subunit RNA" #:M.gallis.1:rem: /citation=[1] #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /product="23S ribosomal RNA" #:M.gallis.1:rem: stem_loop 5680..5755 #:M.gallis.1:rem: /note="stem-loop followed by a row of T's; putative" #:M.gallis.1:rem: /function="putative transcription terminator" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: repeat_unit 5737..5767 #:M.gallis.1:rem: /note="3' half of a stem bracketing 16S and 23S rRNA; #:M.gallis.1:rem: putative" #:M.gallis.1:rem: /function="rRNA processing" #:M.gallis.1:rem: /rpt_type=inverted #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: misc_signal 5749..5776 #:M.gallis.1:rem: /standard_name="boxA" #:M.gallis.1:rem: /note="GTTCTTT loop bracketed by a stem; putative" #:M.gallis.1:rem: /function="antitermination" #:M.gallis.1:rem: /label=boxA #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: misc_signal 5756..5767 #:M.gallis.1:rem: /standard_name="boxC" #:M.gallis.1:rem: /note="(GT)n sequence situated in a close vicinity of boxA #:M.gallis.1:rem: of antiterminator structure; putative" #:M.gallis.1:rem: /function="antitermination" #:M.gallis.1:rem: /label=boxC #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: rRNA 5770..5881 #:M.gallis.1:rem: /gene="rrfA" #:M.gallis.1:rem: /standard_name="5S rRNA" #:M.gallis.1:rem: /note="putative" #:M.gallis.1:rem: /function="ribosomal RNA" #:M.gallis.1:rem: /citation=[1] #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /product="5S ribosomal RNA" #:M.gallis.1:rem: stem_loop 5878..5911 #:M.gallis.1:rem: /note="stem-loop followed by a row of T's; putative" #:M.gallis.1:rem: /function="putative transcription terminator" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: CDS 6211..6663 #:M.gallis.1:rem: /partial #:M.gallis.1:rem: /note="putative; NCBI gi: 530154" #:M.gallis.1:rem: /codon_start=1 #:M.gallis.1:rem: /function="unknown" #:M.gallis.1:rem: /citation=[2] #:M.gallis.1:rem: /citation=[3] #:M.gallis.1:rem: /product="orf" #:M.gallis.1:rem: /translation="MKKYFKIINVTRRQLALFLVYLATLLFASAGIITIMTYGIAFPG #:M.gallis.1:rem: GNNFVIYNENFFKTSLILPLVFFVIFAISGLVILLTGKETYKFDHKLIYQNYKFKLIL #:M.gallis.1:rem: SLIEIIQAIAWVFFLGILIVYFYPIDKTISQVYQDQIASVDFANANIRS" #:M.gallis.1:rem:BASE COUNT 2085 a 1131 c 1506 g 1941 t #:M.gallis.1:rem:ORIGIN #:M.gallis.2:strain:L18 (rpl18), S5 (rps5), L15 (rpl15), secretion protein Y #:M.gallis.2:strain:(secY), adenylate kinase (adk), methionine aminopeptidase #:M.gallis.2:strain:(map), and lactate dehydrogenase (ldh) genes, complete cds #:M.gallis.2:strain:A5969var.B ribosomal proteins S10 (rps10), L3 (rpl3), L4 #:M.gallis.2:strain:(rpl4), L23 (rpl23), L2 (rpl2), S19 (rps19), L22 (rpl22), S3 #:M.gallis.2:strain:(rps3), L16 (rpl16), L29 (rpl29), S17 (rps17), L14 (rpl14), #:M.gallis.2:title:Cloning and sequencing of Mycoplasma gallisepticum chromosome #:M.gallis.2:name:Mycoplasma gallisepticum. #:M.gallis.2:subsp: #:M.gallis.2:strain:L24 (rpl24), L5 (rpl5), S14 (rps14), S8 (rps8), L6 (rpl6), #:M.gallis.2:atcc: #:M.gallis.2:acs:AF036708 #:M.gallis.2:auth:Skamrov,A., Feoktistova,E., Goldman,M. and Beabealashvilli,R. #:M.gallis.2:title:region containing operons S10 and rrn235 #:M.gallis.2:jour:Unpublished #:M.gallis.2:who: #:M.gallis.2:date:12-JAN-1998 #:M.gallis.2:rem:ref:1 (bases 1 to 20115) #:M.gallis.2:rem:ref:2 (bases 1 to 20115) #:M.gallis.2:rem:auth:Beabealashvilli,R. #:M.gallis.2:rem:jour:Submitted (03-DEC-1997) Genetic Engeneering, Cardiology #:M.gallis.2:rem:: Research Center, 3rd. Cherepkovskaya 15A, Moscow 121552, #:M.gallis.2:rem:: Russia #:M.gallis.2:rem:title:Direct Submission #:M.gallis.2:rem:KEYWORDS:. #:M.gallis.2:rem:GenBank ACCESSION:AF0367 8 #:M.floccula:name:Mycoplasma flocculare #:M.floccula:subsp: #:M.floccula:strain: #:M.floccula:atcc: #:M.floccula:acs:L22210 #:M.floccula:auth: #:M.floccula:title: #:M.floccula:jour: #:M.floccula:who: #:M.floccula:date: #:M.floccula:rem:LOCUS MYC16SR 5458 bp ds-DNA Circular BCT 01-SEP-1993 #:M.floccula:rem:DEFINITION Mycoplasma flocculare 16S ribosomal RNA and 23S ribosomal RNA #:M.floccula:rem: genes. #:M.floccula:rem:ACCESSION L22210 #:M.floccula:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA. #:M.floccula:rem:SOURCE Mycoplasma flocculare (strain Ms42) DNA. #:M.floccula:rem: ORGANISM Mycoplasma flocculare #:M.floccula:rem: Prokaryotae; Tenericutes; Mollicutes; Mycoplasmas; Mycoplasmatales; #:M.floccula:rem: Mycoplasmataceae. #:M.floccula:rem:REFERENCE 1 (bases 1 to 5458) #:M.floccula:rem: AUTHORS Stemke,G.W., Laigret,F. and Bove,J.M. #:M.floccula:rem: TITLE The 16S and 23S rRNA operon of Mycoplasma flocculare and comparison #:M.floccula:rem: with Mycoplasma hyopneumoniae #:M.floccula:rem: JOURNAL Unpublished (1993) #:M.floccula:rem: STANDARD full automatic #:M.floccula:rem:FEATURES Location/Qualifiers #:M.floccula:rem: rRNA 354..1894 #:M.floccula:rem: /product="16S ribosomal RNA" #:M.floccula:rem: /gene="16S rRNA" #:M.floccula:rem: rRNA 2290..5187 #:M.floccula:rem: /product="23S ribosomal RNA" #:M.floccula:rem: /gene="23S rRNA" #:M.floccula:rem: source 1..5458 #:M.floccula:rem: /organism="Mycoplasma flocculare" #:M.floccula:rem: /strain="Ms42" #:M.floccula:rem: /sequenced_mol="DNA" #:M.floccula:rem:BASE COUNT 1760 a 942 c 1271 g 1485 t #:M.floccula:rem:ORIGIN #:M.hyopneum:name:Mycoplasma hyopneumoniae #:M.hyopneum:subsp: #:M.hyopneum:strain: #:M.hyopneum:atcc: #:M.hyopneum:acs:X68421 #:M.hyopneum:auth: #:M.hyopneum:title: #:M.hyopneum:jour: #:M.hyopneum:who: #:M.hyopneum:date: #:M.hyopneum:rem:ID MH23SRRN standard; DNA; PRO; 2903 BP. #:M.hyopneum:rem:XX #:M.hyopneum:rem:AC X68421; #:M.hyopneum:rem:XX #:M.hyopneum:rem:DT 29-MAR-1993 (Rel. 35, Created) #:M.hyopneum:rem:DT 29-MAR-1993 (Rel. 35, Last updated, Version 2) #:M.hyopneum:rem:XX #:M.hyopneum:rem:DE M.hyopneumoniae gene for 23S rRNA #:M.hyopneum:rem:XX #:M.hyopneum:rem:KW 23S ribosomal RNA. #:M.hyopneum:rem:XX #:M.hyopneum:rem:OS Mycoplasma hyopneumoniae #:M.hyopneum:rem:OC Prokaryota; Bacteria; Tenericutes; Mollicutes; Mycoplasmas; #:M.hyopneum:rem:OC Mycoplasmatales; Mycoplasmataceae. #:M.hyopneum:rem:XX #:M.hyopneum:rem:RN [1] #:M.hyopneum:rem:RP 1-2903 #:M.hyopneum:rem:RA Ludwig W.; #:M.hyopneum:rem:RT ; #:M.hyopneum:rem:RL Submitted (08-SEP-1992) on tape to the EMBL Data Library by: #:M.hyopneum:rem:RL W. Ludwig, Lehrst. fuer Mikrobiologie TU Muenchen, Arcisstr. 21, #:M.hyopneum:rem:RL 8000 Muenchen 2, FRG #:M.hyopneum:rem:XX #:M.hyopneum:rem:RN [2] #:M.hyopneum:rem:RP 1-2903 #:M.hyopneum:rem:RA Ludwig W., Kirchof G., Klugbauer N., Weizenegger M., Betzl D., #:M.hyopneum:rem:RA Ehrmann M., Hertel C., Jilg S., Tatzel R., Zitzelsberger H., #:M.hyopneum:rem:RA Liebl S., Hochberger M., Shah J., Lane D., Wallnoef P.R.; #:M.hyopneum:rem:RT "Complete 23S ribosomal RNA sequences of Gram-positive Bacteria #:M.hyopneum:rem:RT with a low DNA G+C content"; #:M.hyopneum:rem:RL Syst. Appl. Microbiol. 15:487-501(1992). #:M.hyopneum:rem:XX #:M.hyopneum:rem:CC *source: strain=ATCC 27719; #:M.hyopneum:rem:XX #:M.hyopneum:rem:FH Key Location/Qualifiers #:M.hyopneum:rem:FH #:M.hyopneum:rem:FT rRNA 1..2903 #:M.hyopneum:rem:FT /product="23S ribosomal RNA" #:M.hyopneum:rem:XX #:M.hyopneum:rem:SQ Sequence 2903 BP; 899 A; 529 C; 756 G; 719 T; 0 other; #:GRAM+.CLOS:name: #:GRAM+.CLOS:subsp: #:GRAM+.CLOS:strain: #:GRAM+.CLOS:atcc: #:GRAM+.CLOS:acs:DIVIDER #:GRAM+.CLOS:auth: #:GRAM+.CLOS:title: #:GRAM+.CLOS:jour: #:GRAM+.CLOS:who:Robin Gutell,MCDB-256,28595,7868901 #:GRAM+.CLOS:date:Fri Dec 17 13:33:10 1993 #:C.histol.1:name:Clostridium histolyticum. #:C.histol.1:subsp: #:C.histol.1:strain: #:C.histol.1:atcc:JCM 1403 #:C.histol.1:acs:AB013091 #:C.histol.1:auth:Matsushita,O. #:C.histol.1:title:Clostridium histolyticum 23S rRNA #:C.histol.1:jour:Published Only in DataBase (1998) In press #:C.histol.1:who: #:C.histol.1:date:24-APR-1998 #:C.histol.1:rem:ref:1 (bases 1 to 2669) #:C.histol.1:rem:ref:2 (bases 1 to 2669) #:C.histol.1:rem:auth:Matsushita,O. #:C.histol.1:rem:jour:Submitted (17-APR-1998) to the DDBJ/EMBL/GenBank #:C.histol.1:rem:: databases. Osamu Matsushita, Kagawa Medical University, #:C.histol.1:rem:: Department of Microbiology; 1750-1 Ikenobe, Miki-cho, #:C.histol.1:rem:: Kagawa 761-0793, Japan (E-mail:osamu@kms.ac.jp, Tel:+81(87) #:C.histol.1:rem:: 891-2129, Fax:+81(87)891-2129) #:C.histol.1:rem:title:Direct Submission #:C.histol.1:rem:KEYWORDS:rrlC; 23S ribosomal RNA. #:C.histol.1:rem:GenBank ACCESSION:AB0130 1 #:C.histol.2:name:Clostridium histolyticum. #:C.histol.2:subsp: #:C.histol.2:strain: #:C.histol.2:atcc:JCM 1403 #:C.histol.2:acs:AB013090 #:C.histol.2:auth:Matsushita,O. #:C.histol.2:title:Clostridium histolyticum 23S rRNA #:C.histol.2:jour:Published Only in DataBase (1998) In press #:C.histol.2:who: #:C.histol.2:date:24-APR-1998 #:C.histol.2:rem:ref:1 (bases 1 to 2669) #:C.histol.2:rem:ref:2 (bases 1 to 2669) #:C.histol.2:rem:auth:Matsushita,O. #:C.histol.2:rem:jour:Submitted (17-APR-1998) to the DDBJ/EMBL/GenBank #:C.histol.2:rem:: databases. Osamu Matsushita, Kagawa Medical University, #:C.histol.2:rem:: Department of Microbiology; 1750-1 Ikenobe, Miki-cho, #:C.histol.2:rem:: Kagawa 761-0793, Japan (E-mail:osamu@kms.ac.jp, Tel:+81(87) #:C.histol.2:rem:: 891-2129, Fax:+81(87)891-2129) #:C.histol.2:rem:title:Direct Submission #:C.histol.2:rem:KEYWORDS:rrlB; 23S ribosomal RNA. #:C.histol.2:rem:GenBank ACCESSION:AB0130 0 #:C.histol.3:name:Clostridium histolyticum. #:C.histol.3:subsp: #:C.histol.3:strain: #:C.histol.3:atcc:JCM 1403 #:C.histol.3:acs:AB013089 #:C.histol.3:auth:Matsushita,O. #:C.histol.3:title:Clostridium histolyticum 23S rRNA #:C.histol.3:jour:Published Only in DataBase (1998) In press #:C.histol.3:who: #:C.histol.3:date:24-APR-1998 #:C.histol.3:rem:ref:1 (bases 1 to 2751) #:C.histol.3:rem:ref:2 (bases 1 to 2751) #:C.histol.3:rem:auth:Matsushita,O. #:C.histol.3:rem:jour:Submitted (17-APR-1998) to the DDBJ/EMBL/GenBank #:C.histol.3:rem:: databases. Osamu Matsushita, Kagawa Medical University, #:C.histol.3:rem:: Department of Microbiology; 1750-1 Ikenobe, Miki-cho, #:C.histol.3:rem:: Kagawa 761-0793, Japan (E-mail:osamu@kms.ac.jp, Tel:+81(87) #:C.histol.3:rem:: 891-2129, Fax:+81(87)891-2129) #:C.histol.3:rem:title:Direct Submission #:C.histol.3:rem:KEYWORDS:rrlA; 23S ribosomal RNA. #:C.histol.3:rem:GenBank ACCESSION:AB0130 9 #:C.botuli.a:name:Clostridium botulinum #:C.botuli.a:subsp: #:C.botuli.a:strain: #:C.botuli.a:atcc: #:C.botuli.a:acs:X65602 #:C.botuli.a:auth: #:C.botuli.a:title: #:C.botuli.a:jour: #:C.botuli.a:who: #:C.botuli.a:date: #:C.botuli.a:rem:ID S51077 backbone; DNA; PRO; 3206 BP. #:C.botuli.a:rem:XX #:C.botuli.a:rem:AC S51077; X65602; #:C.botuli.a:rem:XX #:C.botuli.a:rem:DT 16-FEB-1993 (Rel. 34, Created) #:C.botuli.a:rem:DT 16-FEB-1993 (Rel. 34, Last updated, Version 1) #:C.botuli.a:rem:XX #:C.botuli.a:rem:DE 23S rRNA, 5S rRNA {clone pCBA4} [Clostridium botulinum, type A, #:C.botuli.a:rem:DE NCTC 7272, Genomic, 3206 nt] #:C.botuli.a:rem:XX #:C.botuli.a:rem:KW . #:C.botuli.a:rem:XX #:C.botuli.a:rem:OS Clostridium botulinum #:C.botuli.a:rem:OC Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci; #:C.botuli.a:rem:OC Bacillaceae; Clostridium. #:C.botuli.a:rem:XX #:C.botuli.a:rem:RN [1] #:C.botuli.a:rem:RP 1-3206 #:C.botuli.a:rem:RA East A.K., Thompson D.E., Collins M.D.; #:C.botuli.a:rem:RT "Analysis of operons encoding 23S rRNA of Clostridium botulinum #:C.botuli.a:rem:RT type A."; #:C.botuli.a:rem:RL J. Bacteriol. 174:8158-8162(1992). #:C.botuli.a:rem:XX #:C.botuli.a:rem:CC This entry [NCBI gibbsq 120103] was created by the journal scanning #:C.botuli.a:rem:CC component of NCBI/GenBank at the National Library of Medicine. This #:C.botuli.a:rem:CC sequence comes from Fig. 2, 3 and 4. #:C.botuli.a:rem:XX #:C.botuli.a:rem:FH Key Location/Qualifiers #:C.botuli.a:rem:FH #:C.botuli.a:rem:FT rRNA 189..3084 #:C.botuli.a:rem:FT /note="Description: 23S rRNA" #:C.botuli.a:rem:FT rRNA 3176..3206 #:C.botuli.a:rem:FT /partial #:C.botuli.a:rem:FT /note="Description: 5S rRNA" #:C.botuli.a:rem:XX #:C.botuli.a:rem:SQ Sequence 3206 BP; 953 A; 640 C; 913 G; 700 T; 0 other; #:C.botuli.b:name:Clostridium botulinum #:C.botuli.b:subsp: #:C.botuli.b:strain: #:C.botuli.b:atcc: #:C.botuli.b:acs:M94259 #:C.botuli.b:auth: #:C.botuli.b:title: #:C.botuli.b:jour: #:C.botuli.b:who: #:C.botuli.b:date: #:C.botuli.b:rem:LOCUS CLORDGB 2910 bp ds-DNA BCT 07-JUN-1993 #:C.botuli.b:rem:DEFINITION Clostridium botulinum type b 23S ribosomal RNA. #:C.botuli.b:rem:ACCESSION M94259 #:C.botuli.b:rem:KEYWORDS 23S ribosomal RNA. #:C.botuli.b:rem:SOURCE Clostridium botulinum (strain serotype b) (library: ATCC 25765) #:C.botuli.b:rem: DNA. #:C.botuli.b:rem: ORGANISM Clostridium botulinum #:C.botuli.b:rem: Prokaryotae; Firmicutes; Endospore-forming rods and cocci; #:C.botuli.b:rem: Bacillaceae. #:C.botuli.b:rem:REFERENCE 1 (bases 1 to 2910) #:C.botuli.b:rem: AUTHORS Campbell,K.D., East,A.K., Thompson,D.E. and Collins,M.D. #:C.botuli.b:rem: TITLE Studies on the large subunit ribosomal RNA genes and intergenic #:C.botuli.b:rem: spacer regions of non-proteolytic Clostriduim botulinum types B, E, #:C.botuli.b:rem: and F #:C.botuli.b:rem: JOURNAL Res. Microbiol. (1993) In press #:C.botuli.b:rem: STANDARD full automatic #:C.botuli.b:rem:FEATURES Location/Qualifiers #:C.botuli.b:rem: rRNA <1..>2910 #:C.botuli.b:rem: /product="23S ribosomal RNA" #:C.botuli.b:rem: source 1..2910 #:C.botuli.b:rem: /organism="Clostridium botulinum" #:C.botuli.b:rem: /strain="serotype b" #:C.botuli.b:rem: /sequenced_mol="DNA" #:C.botuli.b:rem: /tissue_lib="ATCC 25765" #:C.botuli.b:rem:BASE COUNT 843 a 588 c 856 g 620 t 3 others #:C.botuli.b:rem:ORIGIN #:C.botul.2b:name:Clostridium botulinum #:C.botul.2b:subsp: #:C.botul.2b:strain:strain serotype b #:C.botul.2b:atcc: #:C.botul.2b:acs:M94178 #:C.botul.2b:auth: #:C.botul.2b:title: #:C.botul.2b:jour: #:C.botul.2b:who: #:C.botul.2b:date: #:C.botul.2b:rem:LOCUS CLORDGA 2910 bp ds-DNA BCT 07-JUN-1993 #:C.botul.2b:rem:DEFINITION Clostridium botulinum type b 23S ribosomal RNA. #:C.botul.2b:rem:ACCESSION M94178 #:C.botul.2b:rem:KEYWORDS 23S ribosomal RNA. #:C.botul.2b:rem:SOURCE Clostridium botulinum (strain serotype b) DNA. #:C.botul.2b:rem: ORGANISM Clostridium botulinum #:C.botul.2b:rem: Prokaryotae; Firmicutes; Endospore-forming rods and cocci; #:C.botul.2b:rem: Bacillaceae. #:C.botul.2b:rem:REFERENCE 1 (bases 1 to 2910) #:C.botul.2b:rem: AUTHORS Campbell,K.D., East,A.K., Thompson,D.E. and Collins,M.D. #:C.botul.2b:rem: TITLE Studies on the large subunit ribosomal RNA genes and intergenic #:C.botul.2b:rem: spacer regions of non-proteolytic Clostriduim botulinum types B, E, #:C.botul.2b:rem: and F #:C.botul.2b:rem: JOURNAL Res. Microbiol. (1993) In press #:C.botul.2b:rem: STANDARD full automatic #:C.botul.2b:rem:FEATURES Location/Qualifiers #:C.botul.2b:rem: rRNA <1..>2910 #:C.botul.2b:rem: /product="23S ribosomal RNA" #:C.botul.2b:rem: source 1..2910 #:C.botul.2b:rem: /organism="Clostridium botulinum" #:C.botul.2b:rem: /strain="serotype b" #:C.botul.2b:rem: /sequenced_mol="DNA" #:C.botul.2b:rem:BASE COUNT 844 a 587 c 857 g 620 t 2 others #:C.botul.2b:rem:ORIGIN #:C.botuli.e:name:Clostridium botulinum #:C.botuli.e:subsp: #:C.botuli.e:strain: #:C.botuli.e:atcc: #:C.botuli.e:acs:M94261 #:C.botuli.e:auth: #:C.botuli.e:title: #:C.botuli.e:jour: #:C.botuli.e:who: #:C.botuli.e:date: #:C.botuli.e:rem:LOCUS CLORDGC 2910 bp ds-DNA BCT 07-JUN-1993 #:C.botuli.e:rem:DEFINITION Clostridium botulinum type e 23S ribosomal RNA. #:C.botuli.e:rem:ACCESSION M94261 #:C.botuli.e:rem:KEYWORDS 23S ribosomal RNA. #:C.botuli.e:rem:SOURCE Clostridium botulinum (strain serotype e) DNA. #:C.botuli.e:rem: ORGANISM Clostridium botulinum #:C.botuli.e:rem: Prokaryotae; Firmicutes; Endospore-forming rods and cocci; #:C.botuli.e:rem: Bacillaceae. #:C.botuli.e:rem:REFERENCE 1 (bases 1 to 2910) #:C.botuli.e:rem: AUTHORS Campbell,K.D., East,A.K., Thompson,D.E. and Collins,M.D. #:C.botuli.e:rem: TITLE Studies on the large subunit ribosomal RNA genes and intergenic #:C.botuli.e:rem: spacer regions of non-proteolytic Clostriduim botulinum types B, E, #:C.botuli.e:rem: and F #:C.botuli.e:rem: JOURNAL Res. Microbiol. (1993) In press #:C.botuli.e:rem: STANDARD full automatic #:C.botuli.e:rem:FEATURES Location/Qualifiers #:C.botuli.e:rem: rRNA <1..>2910 #:C.botuli.e:rem: /product="23S ribosomal RNA" #:C.botuli.e:rem: source 1..2910 #:C.botuli.e:rem: /organism="Clostridium botulinum" #:C.botuli.e:rem: /strain="serotype e" #:C.botuli.e:rem: /sequenced_mol="DNA" #:C.botuli.e:rem:BASE COUNT 846 a 589 c 857 g 617 t 1 others #:C.botuli.e:rem:ORIGIN #:C.botuli.f:name:Clostridium botulinum #:C.botuli.f:subsp: #:C.botuli.f:strain: #:C.botuli.f:atcc: #:C.botuli.f:acs:M94260 #:C.botuli.f:auth: #:C.botuli.f:title: #:C.botuli.f:jour: #:C.botuli.f:who: #:C.botuli.f:date: #:C.botuli.f:rem:LOCUS CLORDGE 2770 bp ds-DNA BCT 07-JUN-1993 #:C.botuli.f:rem:DEFINITION Clostridium botulinum 23S ribosomal RNA. #:C.botuli.f:rem:ACCESSION M94260 #:C.botuli.f:rem:KEYWORDS 23S ribosomal RNA. #:C.botuli.f:rem:SOURCE Clostridium botulinum DNA. #:C.botuli.f:rem: ORGANISM Clostridium botulinum #:C.botuli.f:rem: Prokaryotae; Firmicutes; Endospore-forming rods and cocci; #:C.botuli.f:rem: Bacillaceae. #:C.botuli.f:rem:REFERENCE 1 (bases 1 to 2770) #:C.botuli.f:rem: AUTHORS Campbell,K.D., East,A.K., Thompson,D.E. and Collins,M.D. #:C.botuli.f:rem: TITLE Studies on the large subunit ribosomal RNA genes and intergenic #:C.botuli.f:rem: spacer regions of non-proteolytic Clostriduim botulinum types B, E, #:C.botuli.f:rem: and F #:C.botuli.f:rem: JOURNAL Res. Microbiol. (1993) In press #:C.botuli.f:rem: STANDARD full automatic #:C.botuli.f:rem:FEATURES Location/Qualifiers #:C.botuli.f:rem: rRNA <1..>2770 #:C.botuli.f:rem: /product="23S ribosomal RNA" #:C.botuli.f:rem: source 1..2770 #:C.botuli.f:rem: /organism="Clostridium botulinum" #:C.botuli.f:rem: /sequenced_mol="DNA" #:C.botuli.f:rem:BASE COUNT 802 a 567 c 825 g 576 t #:C.botuli.f:rem:ORIGIN #:C.tyrobuty:name:Clostridium tyrobutyricum #:C.tyrobuty:subsp: #:C.tyrobuty:strain: #:C.tyrobuty:atcc: #:C.tyrobuty:acs:L08062 #:C.tyrobuty:auth: #:C.tyrobuty:title: #:C.tyrobuty:jour: #:C.tyrobuty:who: #:C.tyrobuty:date: #:C.tyrobuty:rem:LOCUS CLORGADG 5403 bp ds-DNA BCT 18-DEC-1992 #:C.tyrobuty:rem:DEFINITION Clostridium tyrobutyricum 5S, 16S and 23S ribosomal RNA (rRNA) #:C.tyrobuty:rem: complete genes. #:C.tyrobuty:rem:ACCESSION L08062 #:C.tyrobuty:rem:KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA. #:C.tyrobuty:rem:SOURCE Clostridium tyrobutyricum (strain NIZO 51) DNA. #:C.tyrobuty:rem: ORGANISM Clostridium tyrobutyricum #:C.tyrobuty:rem: Prokaryotae; Firmicutes; Endospore-forming rods and cocci; #:C.tyrobuty:rem: Bacillaceae. #:C.tyrobuty:rem:REFERENCE 1 (bases 1 to 5403) #:C.tyrobuty:rem: AUTHORS van der Meer,J.R., Ludwig,W. and de Vos,W.M. #:C.tyrobuty:rem: TITLE Characterization of a ribosomal RNA gene cluster from Clostridium #:C.tyrobuty:rem: tyrobutyricum: phylogenetic positioning based on the 16S and 23S #:C.tyrobuty:rem: nucleotide sequences #:C.tyrobuty:rem: JOURNAL Unpublished (1993) #:C.tyrobuty:rem: STANDARD full automatic #:C.tyrobuty:rem:FEATURES Location/Qualifiers #:C.tyrobuty:rem: enhancer 78..99 #:C.tyrobuty:rem: promoter 207 #:C.tyrobuty:rem: promoter 315 #:C.tyrobuty:rem: rRNA 468..1980 #:C.tyrobuty:rem: /product="16S ribosomal RNA" #:C.tyrobuty:rem: /gene="16S rRNA" #:C.tyrobuty:rem: /note="putative" #:C.tyrobuty:rem: rRNA 2217..5106 #:C.tyrobuty:rem: /product="23S ribosomal RNA" #:C.tyrobuty:rem: /gene="23S rRNA" #:C.tyrobuty:rem: /note="putative" #:C.tyrobuty:rem: rRNA 5319..5403 #:C.tyrobuty:rem: /product="5S ribosomal RNA" #:C.tyrobuty:rem: /gene="5S rRNA" #:C.tyrobuty:rem: /note="putative" #:C.tyrobuty:rem:BASE COUNT 1631 a 1048 c 1500 g 1224 t #:C.tyrobuty:rem:ORIGIN E.coli 0 -------------------------------------------------- E.coli 50 ----------------------------|---------GGUUAAGCGAC- E.coli 100 --UAAGCGUACACGGUGGAUG|CCCUGG|CAGUCAG|AG|GC-GAUGAAG E.coli 150 GA|CGUG(CUAA-UC-)U|-GCG-AUAAGCGUCGGU|-AAGGU(G-AU-A E.coli 200 UGA-)ACCGUUAUAAC-CGGCGAUU|UCCGAAUGGG(GAAA)CCC|AGUG E.coli 250 UGU-(--------------------------------------------- E.coli 300 -------------------------------------------------- E.coli 350 -------------------------------------------------- E.coli 400 -------------------------------------------------- E.coli 450 ----UUCG)-ACACACU-AUCA-UUAACU(GA-AUCCA--UA)GGU-UAA E.coli 500 -U-G--AGG-C-GAAC|CG-GGGGAACU|GA(AACA)UCUAAGUA-CCCC E.coli 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CCCAGUAGC(GGCGA)G E.coli 600 CGA-ACG-GGGA-GCA-GCCCA-----------------------(---- E.coli 650 -)------------------------------------------------ E.coli 700 -------------------------gagccugaaucaguguguguguu-a E.coli 750 gugGAAg-cgu-c(u-ggaaa)g-gcgcgc|g(aua)caGGG(UGACAGC E.coli 800 )CCCGU-Acac-aaaaaugcaca-ugcug-----ugagcuc--------- E.coli 850 ---------------GAUGAGUAGGGCGGGA(CACGUG-GUA)UCCUGUC E.coli 900 UGAAUAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCCUG E.coli 950 ACUGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G E.coli 1000 AACCCC(GGCGA-)GGGGA--GUGAAA-AAGAACCUGAAACCGU-GUACG E.coli 1050 UACAA-G-CAGUGGGAGCAC--GC--------------(----uuag--) E.coli 1100 --------------GC-GUGUGACUGCGUACCU(UUU-GUAU|A)AUGG| E.coli 1150 -GUCAGCGACUUAU-AUUC-UGUAGC-AAGGUUAACC--(-GAAUA)--G E.coli 1200 G-GGAGCCGAAGG(GAAA-)CCGAGUCU(UAA-CU)GGGCGU-------- E.coli 1250 --------------------------u-aaG-UUGCAGGGUAUA-GACCC E.coli 1300 GAAAC-CCG-GUGA-UCUAGCCAUGGG|CAGGUUGAAGGUUGGG(UAAC) E.coli 1350 AC-UAACUGGAGGACCGAACC-GACUAAU(-GUUGAAAA)AUUAG|CGG- E.coli 1400 AUGAC-UUGUGGCUGGGGGU(-GAAAG)GCCAAUCAAACCGGGAGAUAGC E.coli 1450 UGGUUCUCCCCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGUGAAU---U| E.coli 1500 -CAU|CUCCGG|GGGUAG|AGC-ACUGU-UUCGGCAA-GG|-GGGUC(AU E.coli 1550 CCC)GACUUACCAACCCGAU-GCAAACUGCGAA-UA-|CCG-G-A-G--A E.coli 1600 AUGU---UA|UCA-CGGGAGACACAC--GGC-GGGU(GCUAAC)GUCCGU E.coli 1650 -CGUG-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCA- E.coli 1700 AAGUC-AUGG-U-UAA-GUG------GGAAACGAUGUG-GGAAGGCCCA- E.coli 1750 GACAGCCAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA E.coli 1800 AGC(GUAAUA)GC|UCACUGGU-----CGAGU-CGG-CC--UGC|GCGGA E.coli 1850 AGAU-GUAA-CGGGGCU-AAACCAU-G|C|ACCGAAGCU|GCGG|cagcg E.coli 1900 acgc---(uuau-------------------------------------- E.coli 1950 -------------------------------------------------- E.coli 2000 -------------------------------------------------- E.coli 2050 -------------------------------------------------- E.coli 2100 -------------------------------------------------- E.coli 2150 -----------------------------------)----gcguuguug- E.coli 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- E.coli 2250 -------------------------------------------------- E.coli 2300 --------------------------------G-CCUG-CGAAGGUG-U- E.coli 2350 G-CU(-GUGA-)GGC--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG E.coli 2400 AC|AUA-AGUA--ACGAUAAAGCGGG(UGAAAAG)CCCGCU|CGCC-GGA E.coli 2450 AGACCAAGGGUUCCUG-UCCAACG-(UUAAU)CG|G-GGCAGGGUGAGU| E.coli 2500 CGA|C-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAAAC E.coli 2550 AGG-(UU-AAUAUU)C-CUGU|AC|uu-g-gu-guu-acu---------- E.coli 2600 -------------------------------------------------- E.coli 2650 -------------------------------------------------- E.coli 2700 ------gcgaa------gggg--gga-cggagaaggcua-uguu-g-|gc E.coli 2750 c-ggg(cg--acgg-u-ugu--)cc-cggu-|uuaa-------------- E.coli 2800 ---gcgu-guaggc-------ugguuu-uccagg(ca-aa-u-)cc|g-- E.coli 2850 gaaaaucaa-----------ggcu-gaggcgug-auga|cga-|------ E.coli 2900 ------ggcac(-uacg--)gugcu-----------gaag--caaca-aa E.coli 2950 ugcc-cug-|cuuccaggaaa-agccuc-uaagcauca--------gg-u E.coli 3000 -aacau--caa|A|UCGUACCCCAAACC(GACACA)GG|UGG-UCAGGU- E.coli 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACUCGGGUG----------- E.coli 3100 ----AAGGAACUAGGCAAAAUGGUGCCGUAAC(-UUCG)GGAGAAGGCAC E.coli 3150 |GCUGAUaug-uaggug--------aggucc(-cucgc)ggaug------ E.coli 3200 ---gagcug-aaAUCAG-U|C(GAA)GAUACCAGCUG-GCUG|CAACU-- E.coli 3250 ---GU(UUAUUAAAA)ACACAGCACUGUG|CAAACAC(GAAA------)G E.coli 3300 UGGACGU-AUACGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAUU E.coli 3350 GAUGGGGUUAGC--------(G-CAA)-----------GCGA-AGCUCUU E.coli 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( E.coli 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA E.coli 3500 AUGGCGUAAUGA-UGGCCAGGCUGUCUCCACCCGAGACUCA|GUGAAAUU E.coli 3550 |GAACUCG-CUG(UGAAGAUG)CAGUGUACCCGCGGC-AAGACGGAAAGA E.coli 3600 CCCCGUGA|ACCU-UUACUAU|AGCUUGACACU|GAACAUUGAGCCUUGA E.coli 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAG--UGUGGAC(GCCA)GUCUGCA E.coli 3700 UGGAGCCGAC-C-UUGAAAUACCACC|CUUU-AAUGUUUGAUG-UUCUAA E.coli 3750 -CGUUGA----CCCG(--UA-AUC)-CGGGUUGCG-GACAGUGUCUGGUG E.coli 3800 GG-UAGUUUGACUG(GGG)CGGUC|UCCUCC(UAA-AGAGUAAC)GGAGG E.coli 3850 A|G|C|ACGAAGGUUGGC|UAAUCCUGG(UCGGACA)UCAGGAGGU-UA| E.coli 3900 GU(G|CAAUG)GCAUAAGCCAGCUUGACUGCGAGCG(UGACGG)CGCGAG E.coli 3950 CAGGUGC(GAAA)GC-AGGU|CAUAGUGAUCCGGUGGUUCUG(AAUGGA) E.coli 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC E.coli 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC E.coli 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GAAGU---A)-GGU E.coli 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGUGGUACG-CGAGCUGG E.coli 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG E.coli 4250 G-G|CG-CUGGAGAACU|GA-|GGGGGGC-UGC--------------UCC E.coli 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGCAUCACUGGUGUUCGGGU|U E.coli 4350 GUCAU(GC-CA-)AUGGCA-CUGCCCGGUAGCU-AAAUGCGGAAGAGAUA E.coli 4400 AGUGCU(GAAAGCAUCUA)AGCACGAAACUUGCCCC|GAGAUGAGUUCUC E.coli 4450 C|CU|GACCCU(-UUA--)AGGGUC-CUG-AAGG|-AA|CGUUG-(AAGA E.coli 4500 CG-A)CGACG-UUGAUAG|GCCGG|GUGUG-UAAGCGCA--(GCGA-)-- E.coli 4550 UGCGU|UG-AGCUA|A|CCGGUACUAAUG-AACCGUGAG|GCUUAA-CCU E.coli 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E.coli 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E.coli 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E.coli 4750 ~~~|||||| AQUIFICALE 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ AQUIFICALE 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ AQUIFICALE 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ AQUIFICALE 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ AQUIFICALE 500 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~(~~~)~~~~~~~~~~~~~ AQUIFICALE 800 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~ AQUIFICALE 900 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1050 ~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~~ AQUIFICALE 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ AQUIFICALE 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ AQUIFICALE 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ AQUIFICALE 1500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~ AQUIFICALE 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ AQUIFICALE 1600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1650 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ AQUIFICALE 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ AQUIFICALE 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2200 ~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ AQUIFICALE 2350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2400 ~~~~~~~~~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ AQUIFICALE 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~~~~~~~~~~~~~ AQUIFICALE 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~ AQUIFICALE 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 2950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- AQUIFICALE 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3200 ~~~~~~~~~-~~~~~~~~~~~(~~~)~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ AQUIFICALE 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ AQUIFICALE 3350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~( AQUIFICALE 3450 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ AQUIFICALE 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ AQUIFICALE 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3750 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~ AQUIFICALE 3800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 3950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~) AQUIFICALE 4000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4050 ~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~)~~ AQUIFICALE 4150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~ AQUIFICALE 4250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ AQUIFICALE 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4550 ~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ AQUIFICALE 4750 ~~~~||||| A.aeolicus 0 -------------------------------------------------- A.aeolicus 50 ----------------------------|---------gugcAAGUUAG- A.aeolicus 100 --UAAGGGCCCGGGGUGGAUG|CCUCGG|CUCCCGG|AG|CC-GAUGAAG A.aeolicus 150 GG|CGUG(CAAA-GC-)U|-GCG-AUAAGCCGGGUG|-GAGGC(G-CA-A A.aeolicus 200 -GA-)GCCGUUG-AGG-CCCGGAUG|CCCGAAUGGG(GAAA)CCC|GGCA A.aeolicus 250 GGC-(--------------------------------------------- A.aeolicus 300 -------------------------------------------------- A.aeolicus 350 -------------------------------------------------- A.aeolicus 400 -------------------------------------------------- A.aeolicus 450 ---gacaa)-GCCUGCC-auc---CCGCC(--uucg------)GGC-GG- A.aeolicus 500 ---g--aaG-G-GAAC|CG-GCCGAAGC|AA(AACC)UUUUAGUA-GGCC A.aeolicus 550 GAGGAAAGGAAAUC(-AAUU--)GAGAC|GCC-CUGAGUAGC(GGCGA)G A.aeolicus 600 CGA-AAG-GGGC-UCA-GCCCAAAcccugugggu-------gcc-(augg A.aeolicus 650 c)ggcggccuuagcccacaggggguagcgggacgugccug---------g A.aeolicus 700 agggguc(cgcc)ggccccuc----ggggaguuacaaaaccccacccu-a A.aeolicus 750 gccGAAguccc-c(u-ggaau)g-gggcgc|c(aua)gaGGG(UGAAAGC A.aeolicus 800 )CCCGU-Aggc-gaaaggguagg-ggucu-------------------cc A.aeolicus 850 cugaggcacgcuccc---AAGUACCGCGGCC(CACGUG-AAA)GGUCGCG A.aeolicus 900 GGAAUCC-GGG-GG(GACCAC)CC-UCC-AAGGCUAA----GUACUCCCG A.aeolicus 950 GGAGACCGAUAGCG-CA--uAGUACC(GUGA)-GGGA-AAGGUGAAAA-G A.aeolicus 1000 AACCCC(ug-gc-)GGGGA--GUGAAA-UAGAACCUGAAACCCC-GGGUC A.aeolicus 1050 CACAA-GCCAGUGGAagggg--uc----c---------(----uau---) A.aeolicus 1100 ------------g-gg-ccccGACUGCGUGCCU(UUU-GCAG|A)AUGA| A.aeolicus 1150 -GCCGGGGAGUUGU-CCUC-AGGGGC-GAGGCUAAGCC-(--guca)-GG A.aeolicus 1200 C-gaAGCCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGc-------- A.aeolicus 1250 -------------------------ca-aaG-UCCCUGGGGGCA-GACGC A.aeolicus 1300 GAAGC-CGG-GCGA-UCUACCCUUGCC|CUGGGUGAAGGCCGGG(UAAC) A.aeolicus 1350 AC-CGGCUGGAGGCCCUAAGG-GGUCGGU(-GCUGCAAA)ACCGU|CCC- A.aeolicus 1400 GUGAG-GUGAGGGUAGCGGU(-GAAAA)GCCaaucGCGCCCGGGGAUAGC A.aeolicus 1450 UCGUUCUCCCCGAAAUGCAU(-CGAA)GUGCAGC|-GUCGCCCgu---u| A.aeolicus 1500 -ccu|UCCCGG|AGGUAG|AGC-ACUGC-UGGGGCUA-GG|-GCCCC(ga A.aeolicus 1550 aa-)GGGGUACCGAACCCCG-GCAAACUCCGAA-UG-|CCG-G-G-A--a A.aeolicus 1600 agg----aa|GGG-CGGCAGUGAGUC--CUC-GGGG(GAUAAG)CUCCGA A.aeolicus 1650 -GGAC-AAGAGGG(-AAACAG-)CCCAGACCGCCGGCUAAG-GC|CCCA- A.aeolicus 1700 AAGUC-CGGG-C-UAA-GUG------GUAAAGGAAGUC-CCCGUCCUAA- A.aeolicus 1750 GACAGCCGGGAGGUUGGC(UUAGAGGCA)GCCAU-CCU|U(UAA)A|CAG A.aeolicus 1800 UGC(GUAACA)GC|UGACCGGU-----CGAGG-GCG-GG--GGC|GCCGA A.aeolicus 1850 AAAU-UUAG-CGGGGCUUAAGCCCG-G|C|GCCGAAGCC|GCGG|gucac A.aeolicus 1900 aggaguc(uccg-------------------------------------- A.aeolicus 1950 -------------------------------------------------- A.aeolicus 2000 -------------------------------------------------- A.aeolicus 2050 -------------------------------------------------- A.aeolicus 2100 -------------------------------------------------- A.aeolicus 2150 -----------------------------------)-gacuccuguggc- A.aeolicus 2200 GG-UAGGGGAG|-----Cguu-ccc-ag---------------------- A.aeolicus 2250 -------------------------------------------------- A.aeolicus 2300 --------------------------------c-gcgc-ugaagcccaa- A.aeolicus 2350 g-cc(-guga-)ggc--agggugg|agcgcu-gGGAAGUGAGAAUCC-CG A.aeolicus 2400 GC|AUG-AGUA-GGAGCGAAGGCAGG(UGAGAAA)CCUGCC|CGCC-GGA A.aeolicus 2450 AGCCCAAGGGUUCGGC-GGCAAUG-(GAAAU)CA|G-CCGCCGGUUAGC| A.aeolicus 2500 CGG|GACCCUAAGGCGAGGCC(GAug)aG-GCGU-AGCCGAUGG-GAAGC A.aeolicus 2550 GGG-(UC-AACAUU)C-CCGC|GC|ca-g-cu-cgg-uggag-------- A.aeolicus 2600 -------------------------------------------------- A.aeolicus 2650 -------------------------------------------------- A.aeolicus 2700 ------ccggu------gucg--uga-cgcaggaggcua-ggcc-g-|gg A.aeolicus 2750 c-ccg(cu--auggaa-ug---)cg-ggu--|gcaa-------------- A.aeolicus 2800 ---ggua-guaggg-------ggacgg-gauagg(ca-aa-u-)cc|g-- A.aeolicus 2850 ucccgucaua----------cccc-gagagccg-augc|cgu-|------ A.aeolicus 2900 -----------(-------)--------------aagc----cggcc-ga A.aeolicus 2950 cgcc-aca-|cugccaagaaacaacggc-gccggcugug-------ag-g A.aeolicus 3000 -ccgag--cug|C|CCGUACCGGAAACC(GACACA)GG|UGG-GCuGGG- A.aeolicus 3050 U-(UAGGA)GCCUAAGGCGU||-CGGGGGAACUCCCCUC----------- A.aeolicus 3100 ----AAGGAACUCGGCAAGUUGGCCCCGUACC(-UUCG)GAAGAAGGGGU A.aeolicus 3150 |GCCCGC--u-ggggug--------uaggcc(cacgc-)ggccg------ A.aeolicus 3200 ---aagccc-uggugGG-U|C(GCA)GUGACAGGGCG-GUGC|CGACU-- A.aeolicus 3250 ---GU(UUACCAAAA)ACACAGGACUACG|CAAACCC(GAAA------)G A.aeolicus 3300 GGGAUGU-AUGUGGUCUGA-AGCCUGGCCAGU|GCCC-GAA-GGUGAAGG A.aeolicus 3350 CCCCCGGU------------(GAUGA)-----------------GCUGGG A.aeolicus 3400 GGCUgAAGCC|CGGGUAAAC|-GCC|GGCCGU(AACUAUG)ACGGUC|C( A.aeolicus 3450 UAA)GGUAGCG-AAAUUCCUU|GCCGGG(UAAGU)UCCGGC|CUGCAUGA A.aeolicus 3500 AUGGCCCAACGA-GUGCCGCACUGUCUCGAGGGGAGUCCCG|CCGAAAUU A.aeolicus 3550 |GUAAUGC-CGG(UCAAGAUG)CCGGCUACCCGCGGC-AGGACGGAAAGA A.aeolicus 3600 CCCCGUGA|AGCU-UCACUGC|AGCCUGGCAUU|GGGCUCUGGCCUGUCC A.aeolicus 3650 UGCGCAGGAUAGGUGGGAGCCUGGGAAG--CCCCCGC(UCCG)GCGGGGG A.aeolicus 3700 UGGAGGCGCC-G-GUGAGAUACCACC|CUGG-ACAGGCUGGGG-UCCUAA A.aeolicus 3750 -CCCAGC----GGGG(-uga-auc)-CCCCGCGGG-GACAGUGCUAGGUG A.aeolicus 3800 GG-CAGUUUAGCUG(GGG)CGGCU|GCCUCC(UAA-AGAGUAAC)GGAGG A.aeolicus 3850 C|G|C|CCAAAGGUCCCC|UCAGGCGGG(UCGGAAA)UCCGCCGUA-GA| A.aeolicus 3900 GU(G|CAAGG)GCAUAAGGGGGCCUGACUGUGAGGC(CGACGG)GCCGAG A.aeolicus 3950 CAGCCGC(GAAA)GC-GGGG|CCUAGUGACCCACCCGCUCCA(CGUGGG) A.aeolicus 4000 AGG|GCGGGUGAUCAGC|GGAUAAAAGCUACUC|CGGG|GAUAACAG|GC A.aeolicus 4050 UAA--UCGCCCCCGAGA(G-CCC-ACA)UCGACGGGG-CGGU-UUGGUAC A.aeolicus 4100 CUCGAUGUC|GGCU|C|CCCCC|AUCC|UGGGGCU(GAAGC---A)-GGU A.aeolicus 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGGGGGACG-CGAGCUGG A.aeolicus 4200 GUUCA-GAAC|GUC(GCGA)-GACAGUU-CGGU-CCCUAU-CC|GCCGCG A.aeolicus 4250 G-G|CG-CAGGAGCCUU|GA-|GGGGGUC-CGU--------------CCC A.aeolicus 4300 (UAGUAC(GAGA)GGACC)GGGACGG|GGCAGGCACUGGUGUACCGGU|U A.aeolicus 4350 GUCcc(uggacu)gggGCA-gcGCCGGGUAGCC-AUCCUGCUACGGGAUA A.aeolicus 4400 AGCGCU(GAAAGCAUCUA)AGCGCGAAGCCCACCCC|AAGAUAAGGGCUC A.aeolicus 4450 C|Cu------------------------G-AAGG|-GC|CCCGG-(GAGA A.aeolicus 4500 CU-A)CCGGG-UUGAUAG|GCCGC|AGGUG-GAAGCCCC--(GUGA-)-- A.aeolicus 4550 GGGGU|GA-AGCCG|A|GCGGUACUAAUC-GCCCGUUCG|ACUUGC-ACg A.aeolicus 4600 cc~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.aeolicus 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.aeolicus 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.aeolicus 4750 ~~~|||||| A.pyrophil 0 -------------------------------------------------- A.pyrophil 50 ----------------------------|-------gggugcAAGUUAG- A.pyrophil 100 --UAAGGGCCCGGGGUGGAUG|CCUCGG|CUCCUGG|AG|CC-GACGAAG A.pyrophil 150 GG|CGUG(CAAA-GC-)U|-GCG-AAAAGCCGGGCG|-GAGGC(G-CA-A A.pyrophil 200 GGA-)GCCUGUG-AGG-CCCGGAUG|CCCGAAUGGG(GAAA)CCC|GGCA A.pyrophil 250 GGC-(--------------------------------------------- A.pyrophil 300 -------------------------------------------------- A.pyrophil 350 -------------------------------------------------- A.pyrophil 400 -------------------------------------------------- A.pyrophil 450 ---ggcaa)-GCCUGCC-agu---CCGCC(--uuuu------)GGC-GG- A.pyrophil 500 ---g--agG-G-GAAC|CG-GCCGAAGC|AA(AACC)UUUUAGUA-GGCC A.pyrophil 550 GAGGAAAGGAAAUC(-AACC--)GAGAC|GCC-CCGAGUAGC(GGCGA)G A.pyrophil 600 CGA-AAG-GGGC-AGA-GCCUAAAcccugugggu-------gcc-(augg A.pyrophil 650 c)ggc---cuuagcccacagggggua-cgggacgugccug---------g A.pyrophil 700 agggguc(cgcc)ggccccuc----ggggaguuacaaaaccccacccu-a A.pyrophil 750 gccGAAguccc-c(u-ggaau)g-gggcgc|c(aca)gaGGG(UGAAAGC A.pyrophil 800 )CCCGU-Aggc-gaaaggguagg-ggucu-------------------cc A.pyrophil 850 cugaggcacgauccc---GAGUACCGCGGCC(CACGUG-AAA)GGUCGCG A.pyrophil 900 GGAAUCA-GGG-GG(GACCAC)CC-UCC-AAGGCUAA----GUACUCCC- A.pyrophil 950 GGAGACCGAUAGCG-CA--uAGUACC(GUGA)-GGGA-AAGGUGAAAA-G A.pyrophil 1000 AACCC-(ug-gc-)GGGGA--GUGAAA-UAGAACCUGAAACCCC-GGGUC A.pyrophil 1050 CACAA-G-Uggcac--gg--------------------(-cccuccc--) A.pyrophil 1100 -------------------ccGACUGCGUGCCU(UUU-GCAG|A)AUGA| A.pyrophil 1150 -GCCGGGGAGUUGU-CCUC-AGGGGC-GAGGCUAAGCC-(--gaca)-GG A.pyrophil 1200 C-gaAGCCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGc-------- A.pyrophil 1250 --------------------------a-aaG-UCCCUGGGGGCA-GACGC A.pyrophil 1300 GAAGC-CGG-GCGA-UCUACCCUUGCC|CUGGGUGAAGGCCGGG(UAAC) A.pyrophil 1350 AC-CGGCUGGAGGCCCUAAGG-GGUCGGU(-GCUGCAAA)ACCGU|CCC- A.pyrophil 1400 GUGAG-GUGAGGGUAGCGGU(-GAAAA)GCCaaucGCGCCCGGGGAUAGC A.pyrophil 1450 UCGUUCUCCCCGAAAUGCAU(-CGAA)GUGCAGC|-GUCGCCCgc---u| A.pyrophil 1500 -ccu|UCCCGG|AGGUAG|AGC-ACUGC-UAGGGCUA-GG|-GCCCC(-a A.pyrophil 1550 aa-)GGGGUACCGAACCCUG-GCAAACUCCGAA-UG-|CCG-G-G-A--a A.pyrophil 1600 agg----ga|GGG-CGGCAGUGAGUC--CUC-GGGG(GAUAAG)CUCCGA A.pyrophil 1650 -GGACcAAGAAGG(-AAACAA-)CCCAGACCGCCGGCUAAG-GC|CCCA- A.pyrophil 1700 AAGUC-CGGG-C-UAA-GUG------GUAAAGGAGGUC-CCCGCCCUAA- A.pyrophil 1750 GACAGCCGGGAGGUUGGC(UUAGAGGCA)GCCAU-CCU|U(UAA)A|CAG A.pyrophil 1800 UGC(GUAACA)GC|UGACCGGU-----CGAGG-GCG-GG--GGC|GCCGA A.pyrophil 1850 AAAU-UUAG-CGGGGCUCAAGCCCG-G|C|GCCGAAGCC|GCGG|gucac A.pyrophil 1900 acgagcc(uccg-------------------------------------- A.pyrophil 1950 -------------------------------------------------- A.pyrophil 2000 -------------------------------------------------- A.pyrophil 2050 -------------------------------------------------- A.pyrophil 2100 -------------------------------------------------- A.pyrophil 2150 -----------------------------------)-ggcucguguggc- A.pyrophil 2200 GG-UAGGGGAG|-----Cguu-ccc-ag---------------------- A.pyrophil 2250 -------------------------------------------------- A.pyrophil 2300 --------------------------------c-gcgc-ugaagcccaa- A.pyrophil 2350 g-cc(-gcga-)ggc--ggggugg|agcgcu-ggGAAGUGAGAAUCC-CG A.pyrophil 2400 GC|AUG-AGUAgGGAGCGAAGGCCGG(UGAGAAG)CCGGCC|CGCC-GGA A.pyrophil 2450 AGCCCAAGGGUUCGGC-GGCAAUG-(GAAAU)CA|G-CCGCCGGUUAGC| A.pyrophil 2500 CGG|GACCCUAAGGCGAGGCC(GAAg)aG-GCGU-AGCCGAUGG-GAAGG A.pyrophil 2550 GGG-(UC-AACAUU)C-CCCC|GC|ca-g-cu-cgg-uggag-------- A.pyrophil 2600 -------------------------------------------------- A.pyrophil 2650 -------------------------------------------------- A.pyrophil 2700 ------ccggu------gucg--uga-cgcaggaggcua-ggcc-g-|gg A.pyrophil 2750 c-ccg(cu--auggaa-ug---)cg-ggu--|guaa-------------- A.pyrophil 2800 ---ggua-guaggg-------ggacgg-aacagg(ca-aa-u-)cc|g-- A.pyrophil 2850 uuccgucaaa----------cccc-gagagccg-augc|cgu-|------ A.pyrophil 2900 -----------(-------)--------------aagc----cggcc-ga A.pyrophil 2950 cgcc-aca-|cugccaagaaacaacggc-gccggcugag-------ag-g A.pyrophil 3000 -ccgag--cug|C|CCGUACCGGAAACC(GACACA)GG|UGG-GCuGGG- A.pyrophil 3050 U-(UAGGA)GCCUAAGGCGU||-CGGGGGAACUCCCCUC----------- A.pyrophil 3100 ----AAGGAACUCGGCAAGUUGGCCCCGUACC(-UUCG)GAAGAAGGGGU A.pyrophil 3150 |GCCCGCg-u-uaggug--------uaggcc(cgagc-)ggccg------ A.pyrophil 3200 ---aagccg-aggcgGG-U|C(GCA)GUGACAGGGCG-GUGC|CGACU-- A.pyrophil 3250 ---GU(UUACCAAAA)ACACAGGACUACG|CAAACCC(GAAA------)G A.pyrophil 3300 GGGAUGU-AUGUGGUCUGA-AGCCUGGCCAGU|GCCC-GAA-GGUGAAGG A.pyrophil 3350 CCCCCGGU------------(GAUGA)-----------------GCUGGG A.pyrophil 3400 GGCUgAAGCC|CGGGUAAAC|-GCC|GGCCGU(AACUAUG)ACGGUC|C( A.pyrophil 3450 UAA)GGUAGCG-AAAUUCCUU|GCCGGG(UAAGU)UCCGGC|CUGCAUGA A.pyrophil 3500 AUGGCCCAACGA-GUGCCGCACUGUCUCGAGGGGAGUCCCG|CCGAAAUU A.pyrophil 3550 |GUAAUGC-CGG(UCAAGAUG)CCGGCUACCCGCGGC-AGGACGGAAAGA A.pyrophil 3600 CCCCGUGA|AGCU-UCACUGC|AGCCUGGCAUU|GGGCUCUGGCCUGUCC A.pyrophil 3650 UGCGCAGGAUAGGUGGGAGCCUGGGAAG--CCCCCGC(UCCG)GCUGGGG A.pyrophil 3700 UGGAGGCGCC-G-GUGAGAUACCACC|CUGG-ACAGGCUGGAG-UCCUAA A.pyrophil 3750 -CCCAGC----GGGG(-uga-agc)-CCCCGCGGG-GACAGUGCUAGGUG A.pyrophil 3800 GG-CAGUUUAGCUG(GGG)CGGCU|GCCUCC(UAA-AAGGUAAC)GGAGG A.pyrophil 3850 C|G|C|CCAAAGGUCCCC|UCAGGCGGG(UCGGAAA)UCCGCCGAA-GA| A.pyrophil 3900 GU(G|CAAGG)GCAGAAGGGGGCCUGACUGUGAGGC(CGACAG)GCCGAG A.pyrophil 3950 CAGCCGC(GAAA)GC-GGGG|CCUAGUGACCCACCCGCUCCA(CGUGGG) A.pyrophil 4000 AGG|GCGGGUGAUCAGC|GGAUAAAAGCUACUC|CGGG|GAUAACAG|GC A.pyrophil 4050 UAA--UCGCCCCCGAGA(G-CCC-ACA)UCGACGGGG-CGGU-UUGGUAC A.pyrophil 4100 CUCGAUGUC|GGCU|C|CCCCC|AUCC|UGGGGCU(GAAGC---A)-GGU A.pyrophil 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGGGGGACG-CGAGCUGG A.pyrophil 4200 GUUCA-GAAC|GUC(GCGA)-GACAGUU-CGGU-CCCUAU-CC|GCCGCG A.pyrophil 4250 G-G|CG-CAGGAGCCUU|GA-|GGGGGUC-CGU--------------CCC A.pyrophil 4300 (UAGUAC(GAGA)GGACC)GGGACGG|GGCAGGCUCUGGUGUACCGGU|U A.pyrophil 4350 GUCcc(uggacu)gggGCA-gcGCCGGGUAGCC-ACCCUGCUACGGGAUA A.pyrophil 4400 AGCGCU(GAAAGCAUCUA)AGCGCGAAGCCCACCCC|AAGAUAAGGGCUC A.pyrophil 4450 C|Cu------------------------G-AAGG|-GC|CCUCC-(GAGA A.pyrophil 4500 CU-A)GGAGG-UAGAUAG|GCCGC|AGGUG-GAAGCCCC--(GCAA-)-- A.pyrophil 4550 GGGGU|AG-AGCCG|A|GCGGUACUAAUC-GCCCGUUCG|ACUUGC-ACg A.pyrophil 4600 cc------|gguggguggagguaugggcuuuauucuguugacgauugccc A.pyrophil 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.pyrophil 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.pyrophil 4750 ~~~|||||| THERMOTOGA 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ THERMOTOGA 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ THERMOTOGA 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ THERMOTOGA 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- THERMOTOGA 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ THERMOTOGA 350 -------------------------------------------------- THERMOTOGA 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ THERMOTOGA 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ THERMOTOGA 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ THERMOTOGA 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ THERMOTOGA 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ THERMOTOGA 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ THERMOTOGA 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ THERMOTOGA 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ THERMOTOGA 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| THERMOTOGA 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ THERMOTOGA 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ THERMOTOGA 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ THERMOTOGA 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| THERMOTOGA 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ THERMOTOGA 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ THERMOTOGA 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ THERMOTOGA 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- THERMOTOGA 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ THERMOTOGA 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ THERMOTOGA 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ THERMOTOGA 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- THERMOTOGA 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ THERMOTOGA 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ THERMOTOGA 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| THERMOTOGA 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ THERMOTOGA 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ THERMOTOGA 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ THERMOTOGA 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- THERMOTOGA 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ THERMOTOGA 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ THERMOTOGA 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ THERMOTOGA 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- THERMOTOGA 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ THERMOTOGA 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- THERMOTOGA 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ THERMOTOGA 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ THERMOTOGA 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( THERMOTOGA 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ THERMOTOGA 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ THERMOTOGA 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ THERMOTOGA 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ THERMOTOGA 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ THERMOTOGA 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ THERMOTOGA 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) THERMOTOGA 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| THERMOTOGA 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ THERMOTOGA 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ THERMOTOGA 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ THERMOTOGA 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- THERMOTOGA 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ THERMOTOGA 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ THERMOTOGA 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ THERMOTOGA 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ THERMOTOGA 4500 ~~~~~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~-~~~~~~~~~~~~~~ THERMOTOGA 4550 ~--~~~~~~|~~~~|~~~-~|~~~~~~~~~~~~~~~~~--~~~|~~~~~~ THERMOTOGA 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ THERMOTOGA 4750 ~~~~||||| F.islandic 0 -------------------------------------------------- F.islandic 50 ----ugguggagggucauugaaaagugc|auaggguaaGGUGAAGGUAC- F.islandic 100 --UAAGGGCACGCAGUGGAUG|CCUAGG|CGGCAGG|AG|GC-GAGGAAG F.islandic 150 GG|CGUG(GCAA-GC-)U|-GCG-AAAAGCCUGGGG|-GAGCU(G-CA-A F.islandic 200 GCG-)AGCGUUG-AUC-CCAGGAUU|CCCGAAUGGG(GCAA)CCU|Gcac F.islandic 250 ggga(--------------------------------------------- F.islandic 300 -------------------------------------------------- F.islandic 350 -------------------------------------------------- F.islandic 400 -------------------------------------------------- F.islandic 450 ---ggcaa)ucccgugc---gc-cc----(---gaga-----)-----gg F.islandic 500 -g-c----g-cgagAC|CC-GGGGAAGU|GA(AACA)UCUCAGUA-CCCG F.islandic 550 GAGGAAGAGAAAUC(-AAGC--)GAGAU|UCC-CUGAGUAGA(GGCGA)U F.islandic 600 CGA-AAG-GGGA-GGA-GCCUAAAccagc--------------g-(uuag F.islandic 650 -)---u-----------gcugggguugugggacacagcu-------aggc F.islandic 700 ugaga-ccgc-ucugaggc----------------------guugugu-a F.islandic 750 gccGAAc-agu-c(u-gggaa)g-gcuggc|c(gua)gaGGG(UGAUAGC F.islandic 800 )CCCGU-Aggc-gaaacgcaacgcg-caggagu----------------- F.islandic 850 ---ggcugugauccc---GAGUAGCGCGGGA(CUCGAG-GAA)UCCCGCG F.islandic 900 UGAAuca-GGG-GG(GACCAC)CC-UCC-AAGGCUAA----AUACUACCU F.islandic 950 GCCGACCGAUAGCGCAAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G F.islandic 1000 CACCCC(gg-aa-)GGGGA--GUGAAA-GAGGACCUGAAACUGC-GUGCC F.islandic 1050 UACAA-G-AAGUCGGAGCCC------------------(----gcga--) F.islandic 1100 -----------------ggGUGACGAUGUGCCU(UUU-GAUU|A)AUGA| F.islandic 1150 -GCCUGGGAGUUAC-CGUA-CCUGGC-GAGGUUAAGCC-(gguaga)-GG F.islandic 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUCC(GAA-GA)GGGCG--------- F.islandic 1250 --------------------------g-aag-ucagguacgguA-GACCC F.islandic 1300 GAAGC-CGG-GUGA-GCUACCCAUGGG|CAGGAUGAAGGUGGGG(UAAA) F.islandic 1350 AC-CCACUGGAGGUCCGAACC-GGUGGAU(-CGUGAAAA)AUCCU|CGG- F.islandic 1400 AUGAC-CUGUGGGUAGGAGU(-GAAAA)GCUAACCGAACCCGGUGAUAGC F.islandic 1450 UGGUUCUCCCCGAAAUGCAU(-UGAG)GUGCAGC|-CUCGGCAgu---u| F.islandic 1500 -cug|UGGUGG|AGGUAG|AGC-ACUGA-UAGGGCUA-GU|-GGG--(gu F.islandic 1550 ua-)--CCU-GCGAACCCUG-UCAAACUGCGAA-UG-|CCA-C-C-A--- F.islandic 1600 cacu---aa|UGC-CGGGAGUGAGCC--CGU-GGGG(GAUAAG)CUCCAC F.islandic 1650 -GGAC-GAGAGGG(-GAACAA-)CCCAGACCGUCGGCUAAG-GG|CCCC- F.islandic 1700 AAGAG-GUGG-C-UAA-GUG-ugaagAGGAAGGAUGUG-GUGCGUCCUA- F.islandic 1750 GACAACCGGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAG F.islandic 1800 UGC(GUAACA)GC|UCACCGGU-----CGAGA-CGC-AC--UGC|GCCGA F.islandic 1850 AAAU-GUGC-CGGGGCUCAAGCCAC-C|C|UCCGAAGCC|ACGG|aacca F.islandic 1900 gc-----(ggaa-------------------------------------- F.islandic 1950 -------------------------------------------------- F.islandic 2000 -------------------------------------------------- F.islandic 2050 -------------------------------------------------- F.islandic 2100 -------------------------------------------------- F.islandic 2150 -----------------------------------)------gcugguu- F.islandic 2200 GG-UAGGGGAG|-----Cguu-ccg-cgg--------------------- F.islandic 2250 -------------------------------------------------- F.islandic 2300 --------------------------------U-AGGG-AGAAGGUA-GA F.islandic 2350 C-CC(-GUGA-)GGG--CUACUGG|ACGAGG-CGGAAGUGAGAAUCC-AG F.islandic 2400 GC|AUG-AGUA-UACGAG-AGGAUGG(UGAGAAU)CCAUCC|CCCC-GAA F.islandic 2450 AGCCUAAGGGUACCUG-GGGAAGG-(UUCGU)CC|G-CCCAGGGUUAGU| F.islandic 2500 CGG|GA-CCUAAGGUAAACCC(GAAA)-G-GGGU-ACCCGAUGG-GAAAC F.islandic 2550 CGG-(UU-AAUAUU)C-CGGU|AC|ca-c-cu-gcg-uaucg-------- F.islandic 2600 -------------------------------------------------- F.islandic 2650 -------------------------------------------------- F.islandic 2700 ---auacuguag-----gcgg--gga-cgcaggaggcua-agcu-cc|-g F.islandic 2750 g-gga(ua-aguggca-aa---)uc-ccu--|ccaa-------------- F.islandic 2800 ---gcgg-uuaggc-g-a--agagggc-uguagg(ua-ag-u-)cc|g-- F.islandic 2850 cagcc-uga------------gcu-gagccgug-aagg|gga-|------ F.islandic 2900 ------gagcc(-uucg--)ggcuc------------aac--ggagc-ug F.islandic 2950 acgc-cacg|cugccgagaaa-agccgcgugcag----------ugau-a F.islandic 3000 -cgugg--gug|C|CCGUUCCGCAAACC(GACACA)GG|UAG-GCGGGC- F.islandic 3050 U-(GAGAA)AGCUAAGGGGA||GCGGGAUAACCCUUGCC----------- F.islandic 3100 ----AAGGAACUCGGCAAAUUGGCCCCGUAAC(-UUCG)GGAGAAGGGGU F.islandic 3150 |GCUACGgua-gguugaacccaggggaagcc(-gcaa-)ggcggaaacug F.islandic 3200 ggggaggcc-gaGGUAG-C|C(GCA)GUGACAAGGCC-CUGG|CGACU-- F.islandic 3250 ---GU(UUACCAAAA)ACACAGGUCUCUG|CGAACUC(GAUG---A--)G F.islandic 3300 AGGAAGU-AUAGGGACUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGG F.islandic 3350 GGAGGGGU------------(G-caa)-----------------GCUCCG F.islandic 3400 AACCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( F.islandic 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCAUGA F.islandic 3500 AUGGCGUAACGA-CUGGGGCACUGUCUCGGCAGGGGACCCG|GUGAAAUU F.islandic 3550 |UCAGUCU-GGG(UGAAGAUG)CCCAGUACCCGCAGC-UAGACGGAAAGA F.islandic 3600 CCCCGUGG|AGCU-UUACUGU|AGCCUGGUAUU|GUGCUCUGUUGCGGCG F.islandic 3650 UGUACAGGAUAGGUGGGAGGCUGAGAAC--CGUGCUC(GCCA)GGGUGCG F.islandic 3700 GGGAGCCGCC-G-GUGGGAUACCACC|CUCG-UCGCAGCGGAG-UUCUAA F.islandic 3750 -CCUACG----CGUG(ugga-gag)-CACGCGAGG-GACAGUGCCAGGUG F.islandic 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGGGUAAC)GGAGG F.islandic 3850 C|G|C|GCAAAGCUCGGC|UCAGGUGGG(UUGGAAA)UCCACCGUA-GA| F.islandic 3900 GU(G|CAAGG)GCAAAAGCCGGGCUGACUGCGAGAC(CGACGG)GUCGAG F.islandic 3950 CAGAGGG(GAAA)CC-CGGU|CCUAGUGACCCGGCGACUCCG(AGUGGA) F.islandic 4000 AGG|GUCGUCGAUCAAC|GGACAAAAGUUACCC|CGGG|GAUAACAG|GC F.islandic 4050 UAG--UCUAGCCCGAGA(G-UUC-ACA)UCGACGGCU-AGGC-UCGGCAC F.islandic 4100 CUCGAUGUC|GGCU|C|AUCCC|AUCC|UGGGGCU(GAAGC---A)-GGU F.islandic 4150 CCCAAGGGU|UAGGC(UGUUC)GC-CUAUUAAAGGGGUACG-UGAGCUGG F.islandic 4200 GUUCA-GACC|GUC(GUGA)-GACAGGU-CGGU-CCCUAU-CU|GCUGCG F.islandic 4250 G-G|CG-CAGGAGGCUU|GA-|GGAGGGU-CGC--------------CCU F.islandic 4300 (UUGUAC(GAGA)GGACC)AGGGUGA|GGGAGCCUCUGGUGUACCAGC|U F.islandic 4350 GUCCU(GC-CA-)AGGGCAuacGCGGGGUAGCC-ACGCUCCUGAGCGAUA F.islandic 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCGCGCUCC|AAGAUGAGGCCUC F.islandic 4450 ------------------------------AAGG|-CC|GGUCC-(GAGA F.islandic 4500 AG-A)GGACC-UUGAUAG|GCCGG|UGGUG-GGAGCACA--(GCGA-)-- F.islandic 4550 UGUGU|UG-AGCCA|A|CCGGUACUAAUA-GGCCGA-CU|CCUUCA-CCU F.islandic 4600 UG------|-acccuaugcacuuuugaaugacccugggugccg~~~~~~~ F.islandic 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.islandic 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.islandic 4750 ~~~|||||| T.maritima 0 -------------------------------------------------- T.maritima 50 ----------------------------|---------GGUCAAGGUAC- T.maritima 100 --UAAGGGCACGCGGUGGAUG|CCUUGG|CGGCGGG|AG|GC-GAUGAAG T.maritima 150 GG|CGUG(GCAA-GC-)U|-GCG-AUAAGCCCGGGG|-GAGCC(G-CA-A T.maritima 200 GCA-)GGCGUUG-AUC-CCGGGAUU|CCCGAAUGGG(GAAA)CCU|GGGU T.maritima 250 GGCc(--------------------------------------------- T.maritima 300 -------------------------------------------------- T.maritima 350 -------------------------------------------------- T.maritima 400 -------------------------------------------------- T.maritima 450 -gu--uga)gGCCACUC-Gccg-cc----(---GAAA-----)-----gg T.maritima 500 -c-g--gUG-CgacAC|CG-GGGGAAGU|GA(AACA)UCUCAGUA-CCCC T.maritima 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CCUAGUAGC(GGCGA)G T.maritima 600 CGA-ACG-GGGA-GGA-GCCCAAAccagcg-uggugucaaagcc-(cgug T.maritima 650 -)---ggcguugccac-gcugggguugugggacacggcc-------gggc T.maritima 700 gaggc-cacg-gacucgcc------ggggaguuacaaaucccuccucu-a T.maritima 750 gccGAAc-cac-c(u-gggaa)g-gugggc|c(gga)gaGGG(UGACAGC T.maritima 800 )CCCGU-Aggc-gaaaggggaggga-cucccug----------------- T.maritima 850 ---ggccgugcuccc---GAGUACCACGGGA(CACGUG-GAA)UCCCGUG T.maritima 900 GGAAGCU-GGG-GG(GACCAC)CC-UCC-AAGGCUAA----AUACUACCC T.maritima 950 GCCGUCCGAUAGCGC-AC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G T.maritima 1000 CACCCC(gg-aa-)GGGGA--GUGAAA-GAGGACCUGAAACCGC-GUGCC T.maritima 1050 UACAA-G-AAGUCGGAGCCC--CC--------------(----auuu--) T.maritima 1100 --------------GG-GGGUGACGGCGUGCCU(UUU-GAUU|A)AUGA| T.maritima 1150 -GCCCGCGAGUUGC-CGUC-GGUGGC-GAGGUUAAGCC-(gacgaa)-GG T.maritima 1200 C-GUAGCCGUAGC(GAAA-)GCGAGUCC(GAA-CA)GGGCGc-------- T.maritima 1250 --------------------------u-caG-UCACCGGCGGCA-GACCC T.maritima 1300 GAAGC-CGG-GUGA-GCUACCCCUGGG|CAGGGUGAAGGUGGGU(UAAA) T.maritima 1350 AC-CCACUGGAGGCCCGAACC-GGUGGAC(-AGUGAAAA)GUCCU|CGG- T.maritima 1400 AUGAC-CUGGGGGUAGGAGU(-GAAAA)GCUAACCGAACCCGGUGAUAGC T.maritima 1450 UGGUUCUCCCCGAAAUGCAU(-UGAG)GUGCAGC|-CUCGGGCgg---u| T.maritima 1500 -cug|UGCAGG|GGGUAG|AGC-ACUGA-UGGGGCUA-GG|-GGG--(gu T.maritima 1550 uu-)--CCU-CCGAACCCCG-UCAAACUCCGAA-UC-|CCU-G-C-A--- T.maritima 1600 caca---aa|GCC-CGGGAGUGAGCC--CGC-GGGG(GAUAAG)CUCCGC T.maritima 1650 -GGAC-GAGAGGG(-GAACAA-)CCCAGACCGCCGGCUAAG-GG|CCCG- T.maritima 1700 AAGAG-GUGG-C-UAA-GUG------GUAAAGGAUGUG-GAGCGCCUAA- T.maritima 1750 GACAGCUGGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAG T.maritima 1800 UGC(GUAACA)GC|UCACCAGC-----CGAGG-CGC-UC--UGC|ACCGA T.maritima 1850 AAAU-GUAA-CGGGGCUCAAGCCAC-C|C|CCCGAAGCC|GCGG|gucag T.maritima 1900 uaccucc(gcu--------------------------------------- T.maritima 1950 -------------------------------------------------- T.maritima 2000 -------------------------------------------------- T.maritima 2050 -------------------------------------------------- T.maritima 2100 -------------------------------------------------- T.maritima 2150 -----------------------------------)-ggagguacuggc- T.maritima 2200 GG-UAGGGGAG|-----CUUU-CCG-CUG--------------------- T.maritima 2250 -------------------------------------------------- T.maritima 2300 --------------------------------U-AGGG-UGAAGGCG-GA T.maritima 2350 C-CC(-GCGA-)GGG--CCGCUGG|ACGAGG-CGGAAGUGAGAAUGC-GG T.maritima 2400 GC|AUG-AGUA-CGCGAA-AGGAGGG(UGAGAAU)CCCUCC|CCCC-GUA T.maritima 2450 AGCCCAAGGGUACCUG-GGGAAGG-(UUCGU)CC|G-CCCAGGGUUAGC| T.maritima 2500 CGG|GACCCUAAGGUGAACCC(GAAA)-G-GGGU-AGCCGAAGG-GAAGC T.maritima 2550 CGG-(UU-AAUAUU)C-CGGC|GC|ca-c-cu-gcg-gucga-------- T.maritima 2600 -------------------------------------------------- T.maritima 2650 -------------------------------------------------- T.maritima 2700 ---ugguacga------gggg--uga-cgcaggagggua-ggcg-cc|-g T.maritima 2750 g-ggg(ca-aguggca-ug---)cc-ccu--|ccaa-------------- T.maritima 2800 ---gcgg-uuagggcg-a--ugacggg-cguagg(ua-aa-u-)cc|g-- T.maritima 2850 cgccc-cga-----------gccu-gagccgug-augg|gga-|------ T.maritima 2900 -----gguccc(-uucg--)gggacc-----------aac--ggcgc-ug T.maritima 2950 accc-caca|cugccgagaaa-aaccuc-gcguaccgcuug-----ag-a T.maritima 3000 ccguag--gug|C|CCGUUCCGCAAACC(GACACA)GG|UGG-GCGGGC- T.maritima 3050 U-(GAGAA)GGCUCAGGGGA||GCGGGUUAACCCUCGCC----------- T.maritima 3100 ----AAGGAACUCGGCAAAUUGGCCCCGUAAC(-UUCG)GGAGAAGGGGU T.maritima 3150 |GCCGCGuua-gggugaacccaggggaaggg(-gcaa-)cccggaaacug T.maritima 3200 ggggagccc-gaGGCGG-U|C(GCA)GUGACAAGGCC-CUGG|CGACU-- T.maritima 3250 ---GU(UUACCAAAA)ACACAGGUCUCUG|CUAACUC(GAAA---A--)G T.maritima 3300 AGGAAGU-AUAGGGACUGA-CGCCUGCCCAGU|GCCG-GAA-GGUUAAGG T.maritima 3350 GGAGGGGUGaggcuccc---(cuugu)------gggagcgu--AGCUCCG T.maritima 3400 ACCCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( T.maritima 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCAUGA T.maritima 3500 AUGGCGUAACGA-CUGGGGCACUGUCUCGGCGGGGGGCCCG|GCGAAAUU T.maritima 3550 |UCAGUCU-GGG(UGAAGAUG)CCCAGUACCCGCGGC-UAGACGGAAAGA T.maritima 3600 CCCCGUGG|AGCU-UUACUGC|AGCCUGGUAUU|GGGCUCUGGUGCAUCG T.maritima 3650 UGUAUAGCAUAGGUGGGAGGCUGUGAAG--CCGCCUC(GCCA)GGGGCGG T.maritima 3700 UGGAGCCGCC-A-GUGGAAUACCACC|CUCG-GUGCACUGGAG-UCCUAA T.maritima 3750 -CCUGAC----CCUG(ugaa-gag)-CAGGGUGGG-GACAGUGCCAGGUG T.maritima 3800 GG-CAGUUUGACUG(GGG)CGGUC|ACCUCC(UAA-AAGGUAAC)GGAGG T.maritima 3850 U|G|U|GCAAAGGUCGGC|UCAGGUGGG(UUGGAAA)UCCACCGCA-GA| T.maritima 3900 GU(G|CAAGG)GCAUAAGCCGGCCUGACUGCGAGGC(CGACAG)GCCGAG T.maritima 3950 CAGGGGG(GAAA)CC-CGGC|CCUAGUGACCCGGCGGUCCCG(UGUGGA) T.maritima 4000 AGG|GCCGUCGAUCAAC|GGAUAAAAGUUACCC|CGGG|GAUAACAG|GC T.maritima 4050 UGG--UCCCGCCCGAGA(G-UUC-ACA)UCGACGGCG-GGGU-UCGGCAC T.maritima 4100 CUCGAUGUC|GGCU|C|AUCCC|AUCC|UGGGGCU(GAAGC---A)-GGU T.maritima 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGGGGUACG-UGAGCUGG T.maritima 4200 GUUCA-GACC|GUC(GUGA)-GACAGGU-CGGU-CCCUAU-CU|GCCGCG T.maritima 4250 G-G|CG-UAGGAGGCUU|GA-|GGGGGGU-CCU--------------CCC T.maritima 4300 (UUGUAC(GAGA)GGACC)GGGAGGA|GGGGGCCUCUGGUGUACCGGC|U T.maritima 4350 GUCGC(GC-CA-)GCGGCAuacGCCGGGUAGCU-ACGCCCCUAAGCGAUA T.maritima 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCGCGCCCC|AAGAUUAGGCCUC T.maritima 4450 C|CA|UCCCG-(-UUA--)-AGGGA--GU-AAGG|-CC|GGUCC-(GAGA T.maritima 4500 AG-A)GGACC-UUGAUAG|GCCGG|GGGUG-UAAGCGCC--(GCAA-)-- T.maritima 4550 GGCGU|UG-AGCCC|A|CCGGUACUAAUC-GGCCGA-GG|CCUUGA-CCU T.maritima 4600 CC------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.maritima 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.maritima 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.maritima 4750 ~~~|||||| RADIO-RESI 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ RADIO-RESI 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ RADIO-RESI 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ RADIO-RESI 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- RADIO-RESI 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ RADIO-RESI 350 -------------------------------------------------- RADIO-RESI 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ RADIO-RESI 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ RADIO-RESI 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ RADIO-RESI 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ RADIO-RESI 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ RADIO-RESI 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ RADIO-RESI 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ RADIO-RESI 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ RADIO-RESI 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| RADIO-RESI 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ RADIO-RESI 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ RADIO-RESI 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ RADIO-RESI 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| RADIO-RESI 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ RADIO-RESI 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ RADIO-RESI 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ RADIO-RESI 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- RADIO-RESI 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ RADIO-RESI 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ RADIO-RESI 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ RADIO-RESI 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- RADIO-RESI 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ RADIO-RESI 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ RADIO-RESI 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| RADIO-RESI 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ RADIO-RESI 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ RADIO-RESI 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ RADIO-RESI 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- RADIO-RESI 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ RADIO-RESI 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ RADIO-RESI 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ RADIO-RESI 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- RADIO-RESI 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ RADIO-RESI 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- RADIO-RESI 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ RADIO-RESI 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ RADIO-RESI 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( RADIO-RESI 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ RADIO-RESI 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ RADIO-RESI 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ RADIO-RESI 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ RADIO-RESI 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ RADIO-RESI 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ RADIO-RESI 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) RADIO-RESI 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| RADIO-RESI 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ RADIO-RESI 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ RADIO-RESI 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ RADIO-RESI 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- RADIO-RESI 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ RADIO-RESI 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ RADIO-RESI 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ RADIO-RESI 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ RADIO-RESI 4500 ~~~~~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~-~~~~~~~~~~~~~~ RADIO-RESI 4550 ~--~~~~~~|~~~~|~~~-~|~~~~~~~~~~~~~~~~~--~~~|~~~~~~ RADIO-RESI 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RADIO-RESI 4750 ~~~~||||| T.thermoph 0 -------------------------------------------------- T.thermoph 50 ----------------------------|---------GGUCAAGAUGG- T.thermoph 100 --UAAGGGCCCACGGUGGAUG|CCUCGG|CACCCG-|AG|CC-GAUGAAG T.thermoph 150 GA|CGUG(GCUA-CC-)U|-GCG-AUAAGCCAGGGG|-GAGCC(G-GU-A T.thermoph 200 GCG-)GGCGUGG-AUC-CCUGGAUG|UCCGAAUGGG(GGAA)CCC|GGCC T.thermoph 250 GGCG(--------------------------------------------- T.thermoph 300 -------------------------------------------------- T.thermoph 350 -------------------------------------------------- T.thermoph 400 -------------------------------------------------- T.thermoph 450 ----ggaa)CGCCGGUC-ACCG-CGC---(---uuuu-----)----GCG T.thermoph 500 -C-GG-g-G-G-gaAC|CU-GGGGAACU|GA(AACA)UCUCAGUA-CCCA T.thermoph 550 GAGGAGAGGAAAGA(-GAAA--)UCGAC|UCC-CUGAGUAGC(GGCGA)G T.thermoph 600 CGA-AAG-GGGA-CCA-GCCUAAAccgucc-gg------------(cuug T.thermoph 650 u)------------ccgggcggggucguggggcccucgg----------- T.thermoph 700 ------------------------------acaccgaauccccagccu-a T.thermoph 750 gccGAAg-cug-u(u-gggaa)g-cagcgc|c(aga)gaGGG(UGAAAGC T.thermoph 800 )CCCGU-Aggc-gaaaggugggg-ggaua--------------------- T.thermoph 850 --ggugaggguaccc---GAGUACCCCGUGG(UUCGUG-GAG)CCAUGGG T.thermoph 900 GGAAUCU-GGG-CG(GACCAC)CGGCCU-AAGGCUAA----Guacuc-cg T.thermoph 950 ggUGACCGAUAGCG-CAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G T.thermoph 1000 AACCCC(gg-ga-)GGG-A--GUGAAA-UAGAGCCUGAAACCGU-GGGCU T.thermoph 1050 UACAA-G-CAGUCACGGCCC--C---------------(----gcaa--) T.thermoph 1100 ---------------G-GGGUUGUGGCGUGCCU(AUU-GAAG|C)AUGA| T.thermoph 1150 -GCCGGCGACUCAC-GGUC-GUGGGC-GAGCUUAAgcc-(-guuga)-gg T.thermoph 1200 c-GGAGGCGUAGG(GAAA-)CCGAGUCC(GAA-CA)GGGCGcaagcgggc T.thermoph 1250 cg(--cacg-----)cggcccgc---a-aaG-UCCGCGGCCGUG-GACCC T.thermoph 1300 GAAAC-CGG-GCGA-GCUAGCCCUGGC|CAGGGUGAAGCUGGGG(UGAG) T.thermoph 1350 AC-CCAGUGGAGGCCCGAACC-GGUGGGG(-GAUGCAAA)CCCCU|CGG- T.thermoph 1400 AUGAG-CUGGGGCUAGGAGU(-GAAAA)GCUAACCGAGCCCGGAGAUAGC T.thermoph 1450 UGGUUCUCCCCGAAAUGACU(-UUAG)GGUCAGC|-CUCAGGCGC---u| T.thermoph 1500 -gac|UGGGGC|CUGUAG|AGC-ACUGA-UAGGGCUA-GG|-GGGCC(ca T.thermoph 1550 cc-)aGCCUACCAAACCCUG-UCAAACUCCGAA-GG-|GUC-c-c-a--g T.thermoph 1600 gug----ga|GCC-UGGGAGUGAGGG--CGC-GAGC(GAUAAC)GUCCGC T.thermoph 1650 -GUCCGAGCGCGG(-GAACAA-)CCGAGACCGCCAGCUAAG-GC|CCCC- T.thermoph 1700 AAGUC-UGGG-C-UAA-GUG------GUAAAGGAUGUG-GCGCCGCGAA- T.thermoph 1750 GACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAG T.thermoph 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-GGC-GC--CGC|GCCGA T.thermoph 1850 AAAU-GAUG-CGGGGCUUAAGCCCA-G|C|GCCGAAGCU|GCGG|gucug T.thermoph 1900 ggg----(gauga------------------------------------- T.thermoph 1950 -------------------------------------------------- T.thermoph 2000 -------------------------------------------------- T.thermoph 2050 -------------------------------------------------- T.thermoph 2100 -------------------------------------------------- T.thermoph 2150 -----------------------------------)-----ccccaggc- T.thermoph 2200 GG-UAGGGGAG|-----CGUU-CCC-GAU--------------------- T.thermoph 2250 -------------------------------------------------- T.thermoph 2300 --------------------------------G-CCGA-UGAAGGCC-G- T.thermoph 2350 ACCC(-GCGA-)GG---CGGCUGG|AGGUAA-GGGAAGUGCGAAUGC-CG T.thermoph 2400 GC|AUG-AGUA--ACGAUAAAGAGGG(UGAGAAU)CCCUCU|CGCC-GUA T.thermoph 2450 AGCCCAAGGGUUCCUA-CGCAAUG-(GUCGU)CA|G-CGUAGGGUUAGG| T.thermoph 2500 CGG|G-ACCUAAGGUGAAGCC(GAAA)-G-GCGU-AGCCGAAGG-GCAGC T.thermoph 2550 CGG-(UU-AAUAUU)C-CGGC|CC|uu-c-cc-gca-ggu---------- T.thermoph 2600 -------------------------------------------------- T.thermoph 2650 -------------------------------------------------- T.thermoph 2700 ------gcgau------gggg--gga-cgcucuaggcua-gggg-g-|ac T.thermoph 2750 c-gga(gc-cauggac-gag--)cc-cggcc|agaa-------------- T.thermoph 2800 ---gcgc--a-ggg--------uggga-gguagg(ca-aa-u-)cc|g-- T.thermoph 2850 ccucccaaca---------agcuc--u-gcgug-gugg|gga-|------ T.thermoph 2900 ------agccc(-guac--)gggug----------acaac--ccccc-ga T.thermoph 2950 agcc-agg-|gagccaagaaa-agccuc-uaagcaca---------ac-c T.thermoph 3000 -ugcgg--gaa|c|CCGUACCGCAAACC(GACACA)GG|UGG-GCGGGU- T.thermoph 3050 GC(AAGAG)CACUCAGGCGC||GCGGGAGAACCCUCGCC----------- T.thermoph 3100 ----AAGGAACUCUGCAAGUUGGCCCCGUAAC(-UUCG)GGAGAAGGGGU T.thermoph 3150 |GCUCCC------------------uggggu(-gauga)gccccg----- T.thermoph 3200 ------------GGGAG-C|C(GCA)GUGAACAGGCU-CUGG|CGACU-- T.thermoph 3250 ---GU(UUACCAAAA)ACACAGCUCUCUG|CGAACUC(GUAA------)G T.thermoph 3300 AGGAGGU-AUAGGGAGCGA-CGCUUGCCCGGU|GCCG-GAA-GGUCAAGG T.thermoph 3350 GGAGGG----GU--------(G-CAA)-----------GC------CCCG T.thermoph 3400 AACCGAAGCC|CCGGUGAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( T.thermoph 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA T.thermoph 3500 AAAGCGUAACGA-CCGGAGCGCUGUCUCGGCGAGGGACCCG|GUGAAAUU T.thermoph 3550 |GAACUGG-CCG(UGAAGAUG)CGGCCUACCCGUGGC-AGGACGAAAAGA T.thermoph 3600 CCCCGUGG|AGCU-UUACUGC|AGCCUGGUGUU|GGCUCUUGGUCGCGCC T.thermoph 3650 UGCGUAGGAUAGGUGGGAGCCUGUGAAC--CCCCGCC(UCCG)GGUGGGG T.thermoph 3700 GGGAGGCGCC-G-GUGAAAUACCACC|CUGG-CGCGGCUGGGG-GCCUAA T.thermoph 3750 -CCC-UC--------(---g-gau)-----GGGGG-GACAGCGCUUGGCG T.thermoph 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AAGGUAAC)GGAGG T.thermoph 3850 C|G|C|CCAAAGGUCCCC|UCAGGCGGG(ACGGAAA)UCCGCCGGA-GA| T.thermoph 3900 GC(G|CAAGG)GUAGAAGGGGGCCUGACUGCGAGGC(CUGCAA)GCCGAG T.thermoph 3950 CAGGGGC(GAAA)GC-CGGG|CCUAGUGAACCGGUGGUCCCG(UGUGGA) T.thermoph 4000 AGG|GCCAUCGAUCAAC|GGAUAAAAGUUACCC|CGGG|GAUAACAG|GC T.thermoph 4050 UGA--UCUCCCCCGAGC(G-UCC-ACA)GCGGCGGGG-AGGU-UUGGCAC T.thermoph 4100 CUCGAUGUC|GGCU|C|GUCGC|AUCC|UGGGGCU(GAAGA---A)-GGU T.thermoph 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGCGGCACG-CGAGCUGG T.thermoph 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CUCUAU-CC|GCCACG T.thermoph 4250 G-G|CG-CAGGAGGCUU|GA-|GGGGGGC-UCU--------------UCC T.thermoph 4300 (UAGUAC(GAGA)GGACC)GGAAGGG|ACGCACCUCUGGUUUCCCAGC|U T.thermoph 4350 GUCCC(UC-CA-)GGGGCAUAAGCUGGGUAGCC-AUGUGCGGAAGGGAUA T.thermoph 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCCCGCCCC|AAGAUGAGGCCUC T.thermoph 4450 C|CA|CGGC--(-gucaa)--GCCG--GU-aagG|-AC|CCGGG-(AAGA T.thermoph 4500 CC-A)CCCGG-UGGAUGG|GCCGG|GGGUG-UAAGCGCC--(GCGA-)-- T.thermoph 4550 GGCGU|UG-AGCCG|A|CCGGUCCCAAUC-GUCCGA-GG|UCUUGA-CCc T.thermoph 4600 cuc-----|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.thermoph 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.thermoph 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.thermoph 4750 ~~~|||||| FLE-CYT-BA 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ FLE-CYT-BA 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ FLE-CYT-BA 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ FLE-CYT-BA 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- FLE-CYT-BA 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ FLE-CYT-BA 350 -------------------------------------------------- FLE-CYT-BA 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ FLE-CYT-BA 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ FLE-CYT-BA 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ FLE-CYT-BA 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ FLE-CYT-BA 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ FLE-CYT-BA 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ FLE-CYT-BA 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ FLE-CYT-BA 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| FLE-CYT-BA 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ FLE-CYT-BA 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ FLE-CYT-BA 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| FLE-CYT-BA 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ FLE-CYT-BA 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ FLE-CYT-BA 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ FLE-CYT-BA 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- FLE-CYT-BA 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ FLE-CYT-BA 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ FLE-CYT-BA 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ FLE-CYT-BA 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- FLE-CYT-BA 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ FLE-CYT-BA 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ FLE-CYT-BA 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| FLE-CYT-BA 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ FLE-CYT-BA 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ FLE-CYT-BA 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ FLE-CYT-BA 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- FLE-CYT-BA 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ FLE-CYT-BA 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ FLE-CYT-BA 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ FLE-CYT-BA 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- FLE-CYT-BA 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- FLE-CYT-BA 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ FLE-CYT-BA 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ FLE-CYT-BA 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( FLE-CYT-BA 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ FLE-CYT-BA 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ FLE-CYT-BA 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ FLE-CYT-BA 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ FLE-CYT-BA 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ FLE-CYT-BA 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ FLE-CYT-BA 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) FLE-CYT-BA 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| FLE-CYT-BA 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ FLE-CYT-BA 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ FLE-CYT-BA 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ FLE-CYT-BA 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- FLE-CYT-BA 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ FLE-CYT-BA 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ FLE-CYT-BA 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ FLE-CYT-BA 4500 ~~~~~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~-~~~~~~~~~~~~~~ FLE-CYT-BA 4550 ~--~~~~~~|~~~~|~~~-~|~~~~~~~~~~~~~~~~~--~~~|~~~~~~ FLE-CYT-BA 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ FLE-CYT-BA 4750 ~~~~||||| M.odoratus 0 -------------------------------------------------- M.odoratus 50 ----------------------------|--------------------- M.odoratus 100 ---NNNNNCGUAUGGGGAAUG|CCUAGG|CUCUCAG|AG|GC-GAAGAAG M.odoratus 150 GA|CGUG(AUAA-GC-)U|-GCG-AAAAGCUACGGG|-NNUUG(G-CA-C M.odoratus 200 ACA-)CGAGUUG-AUC-CGUAGAUA|UCCGAAUGGG(GCAA)CCC|ACUA M.odoratus 250 UGU-(--------------------------------------------- M.odoratus 300 -------------------------------------------------- M.odoratus 350 -------------------------------------------------- M.odoratus 400 -------------------------------------------------- M.odoratus 450 ---ugaag)-ACAUAGU-AUCC-------(---gaaua----)------- M.odoratus 500 -G-G--AGG-C-GAAC|CU-GCUGAACU|GA(AACA)UCUAAGUA-GGCA M.odoratus 550 GAGGAGAAGAAAAC(-AAAA--)GUGAU|UCC-GCUAGUAGU(GGCGA)G M.odoratus 600 CGA-ACG-CGNN-AUA-GCCCAAAccaaug-uugu----------(uacg M.odoratus 650 -)----------gcaauauuggnguuguaggaccac-------------- M.odoratus 700 ------------------------------gauauuucuugcggauugaa M.odoratus 750 uuaGAAu-uac-c(u-ggaaa)g-gunaAC|c(aaa)gaGGG(UGAUAGU M.odoratus 800 )CCCGU-Auaa-guaagagaagauaaggaua------------------- M.odoratus 850 -----gugguauccu---GAGUAGGUCGGGG(CACGUG-AAA)CCCUNAU M.odoratus 900 UGAAACU-GGC-GG(GACCAU)CC-GCU-AAGGCUAA----AUACUCCUG M.odoratus 950 AGAGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G M.odoratus 1000 AACCGU(GAAUA-)ACGGA--GUGAAA-UAGAUCCUGAAACCAU-ACGCN M.odoratus 1050 NNCAA-G-CGGUCGGAGCcc--c---------------(---uuugu--) M.odoratus 1100 ---------------g-ggGNNACGGCGUGCCU(NUU-GCAU|A)AUGA| M.odoratus 1150 -GCCUACGAGUUAC-CGUU-GCUGGC-GAGGAUAAGUga(-uuaag)ucA M.odoratus 1200 U-ggAUCCGUAGC(GAAA-)GCGAGUCU(UAA-UA)GGGCGc-------- M.odoratus 1250 -------------------------uu-uaG-UCAGUAGUGGUA-GACGC M.odoratus 1300 GAAAC-CGU-GUGA-UCUACCCAUGGG|CAGGUUGAAGUUUAGG(UAAC) M.odoratus 1350 AC-UAAAUGGAGGACCGAACC-GUUUAAC(-GCUGAAAA)GUUUU|CGG- M.odoratus 1400 AUGAC-CUGUGGGUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAAAUAGC M.odoratus 1450 UCGUACUCCCCGAAAUGCAU(-UUAG)GUGCAGC|-GAUGAUCau---a| M.odoratus 1500 -guu|acuuag|AGGUAG|AGCuACUGA-UUGGAUGC-GG|-GGGGC(uu M.odoratus 1550 cac)CGCCUACCAAUUCCUG-ACAAACUCCGAA-UG-|cun-a-u-u--- M.odoratus 1600 aaug---au|aAU-CAUCAGUGAGGG--CAU-GGGU(GCUAAG)GUCCAU M.odoratus 1650 -GUCC-GAGAGGG(-AAAGAA-)CCCAGACCAUCAGCUAAG-GU|CCCN- M.odoratus 1700 AAAUG-UAUG-C-UAA-GUu----gaaaAAACGCGGUU-UGAUUGCCCA- M.odoratus 1750 GACAGCUAGGAUGUUGGC(UUGGAAGCA)GCCAUUCAU|U(UAA)A|GAG M.odoratus 1800 UGC(GUAACA)GC|UCACUAGU-----CGAGC-GAU-CG--AGC|AUGGa M.odoratus 1850 uaau-aauc--gggcau-AAGUAUA-C|U|ACCGAAGCU|AUGG|auuua M.odoratus 1900 cgcu---(uua--------------------------------------- M.odoratus 1950 -------------------------------------------------- M.odoratus 2000 -------------------------------------------------- M.odoratus 2050 -------------------------------------------------- M.odoratus 2100 -------------------------------------------------- M.odoratus 2150 -----------------------------------)----ancnunagu- M.odoratus 2200 GG-UAGGGGAG|-----CAUU-CUA-UC---------------------- M.odoratus 2250 -------------------------------------------------- M.odoratus 2300 --------------------------------G-ACGU-AGAAGCCG-U- M.odoratus 2350 A-UU(-GCGA-)GAU--AUGGUNG|AGUUUA-UAGAAAAGAAAAUGU-AG M.odoratus 2400 GC|AUA-AGUA--ACGAUAAGGGGUG(CGAGAAA)CACCCN|NGCC-GUA M.odoratus 2450 AGACUAAGGUUUCCUN-AGCUAUG-(CUAAU)CA|G-CUUAGGGUUAGU| M.odoratus 2500 CGG|G-ACCCAAGGCAGACnC(GAAG)-G-GGGA-CGUCGAUGG-CCAAC M.odoratus 2550 GGG-(NN-AAUAUU)C-CCGU|AC|ua-c-ua-aua-auu---------- M.odoratus 2600 -------------------------------------------------- M.odoratus 2650 -------------------------------------------------- M.odoratus 2700 ------gugau------ggag--uga-cacagugaugaa-agca-c-|cg M.odoratus 2750 c-gaa(cu-gacggaauag---)uu-cguu-|gaa--------------- M.odoratus 2800 ---gcac-guaccua-----uauuucc-uauagu(aa-aa-u-)gc|g-- M.odoratus 2850 uaggaga-------------ugga-gaaaugcg-auag|-ua-|------ M.odoratus 2900 --cucagcguu(-uucg--)aacancnag-------au----agugu-gc M.odoratus 2950 cuaa-ggg-|cugucaagaaa-agcuuc-uaaacuua---------ga-u M.odoratus 3000 -uauua--gua|c|CCGUACCGUAAACC(GACACA)GG|UAG-UCGAGG- M.odoratus 3050 A-(GAGUA)UCCUAAGGCGC||UCGAGAGAUUCAUGGCU----------- M.odoratus 3100 ----AAGGAACUAGGCAAAAUAGACCUGUAAC(-UUCG)GGAGAAAGGUC M.odoratus 3150 |cCGA-------------------------g(-cgcaa)c---------- M.odoratus 3200 --------------UNG-C|C(GCA)GUGAAAAGGUC-CAGG|CGACU-- M.odoratus 3250 ---GU(UUAUCAAAA)ACACAGGGCUCUG|CAAAAUC(GUAA------)G M.odoratus 3300 AUGAAGU-AUAGGGCCUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA M.odoratus 3350 GGAGAUGUUAUC--------(U-UCG)-----------GAGA-AGCAUUG M.odoratus 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AANNNUA)ACGGUC|C( M.odoratus 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA M.odoratus 3500 AUGGUGUAACGA-UCUGGACACUGUCUCAGCCAUGAGCUCG|GUGAAAUU M.odoratus 3550 |GUAGUAU-CGG(UGAAGAUG)CCGAUUACCCGCAGU-GGGACGAAAAGA M.odoratus 3600 CCCUGUGC|ACCU-UUACUAU|AGCUUAGUAUU|GUUCUUGGAUAAGUGA M.odoratus 3650 UGUGUAGGAUAGGUGGGAGACUUCGAUC--CUGCGUC(GCCA)GGCGUAG M.odoratus 3700 GUUAGUCAUU-G-UUGAAAUACCACC|CUNU-GCUUAUUUGAN-AUCUAA M.odoratus 3750 -CUC-UG----C---(--au-u--)----GCAGAG-GACAUUGCUUGGUG M.odoratus 3800 GG-UAGUUUGACUG(GGG)UNGUC|GCCUCC(AAA-AGAGUAAC)GGAGG M.odoratus 3850 C|U|U|CUAAAGGUUCCC|UCAGCACGC(UUGGUAA)CCGUGCGUA-GA| M.odoratus 3900 GU(G|CAAUG)GCAUAAGGGAGCUUGACUGGGAGAC(UAACAA)GUCGAU M.odoratus 3950 CAGGUAC(GAAA)GU-AGAG|CAUAGUGAUCCGGUNGUUCCG(CAUGGA) M.odoratus 4000 AGG|GCCAUCGCUCAAA|GGAUAAAAGGUACGC|CNNN|GAUAACAG|GC M.odoratus 4050 UGA--UCUCCCCCAAGA(G-CUC-AUA)UCGACGGGG-NNGU-UUGGCAC M.odoratus 4100 CUCGAUGUC|GGCU|C|GUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU M.odoratus 4150 CCCAAGGGU|UGNNN(NNUUC)GC-CCAUUAAAGUGGCACG-CGAGCUGG M.odoratus 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CUCUAU-CU|ACUGUG M.odoratus 4250 G-G|CG-UUAGAAAUUU|GA-|GUGGAUC-UNA--------------UUC M.odoratus 4300 (UAGUAC(GAGA)GGACC)GAAUUGG|ACCAACCUCUAGUGCAUCUGU|U M.odoratus 4350 GUCUC(GC-CA-)GGGGCA-UCGCAGAGUAGCU-ACGUUGGGCAGGGANN M.odoratus 4400 NNNNNN(nnnnnnnnnnn)nnnnnnnnnnnnnnnnn|nnnnnnnnnnnnn M.odoratus 4450 n|nn|------(------)--------nn-nnnn|--n|nnnnn-(nnnn M.odoratus 4500 nn-n)nnnnn-nnnnnnn|nnnnn|nnnnn-nnnnnnnn--(nnnn-)-- M.odoratus 4550 nnnnn|nn-nnnnn|n|nnnnnnnnnnnn-nnnnnnnnn|nnnnnn-nnn M.odoratus 4600 nnn-----|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.odoratus 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.odoratus 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.odoratus 4750 ~~~|||||| F.flexilis 0 -------------------------------------------------- F.flexilis 50 ----------------------------|-----------------NAC- F.flexilis 100 --GAAGGGCGCAUGGGGGAUG|CCUAGG|CUCUCAG|AG|GC-GAAGAAG F.flexilis 150 GA|CGUG(AUAA-GC-)U|-GCG-AAAAGCUGCGGG|-GAUUG(G-CA-C F.flexilis 200 AUA-)CGAAUUG-AUC-CGCAGAUG|UCCGAAUGGG(GCAA)CCC|ACUA F.flexilis 250 UGU-(--------------------------------------------- F.flexilis 300 -------------------------------------------------- F.flexilis 350 -------------------------------------------------- F.flexilis 400 -------------------------------------------------- F.flexilis 450 ---ugaag)-ACAUAGU-AUCC-U-----(---GUAA-----)------A F.flexilis 500 -G-G--AGG-C-AAAC|CC-GCUGAACU|GA(AACA)UCUAAGUA-GGCG F.flexilis 550 GAGGAGAAGAAAAC(-AAAA--)GUGAU|UUC-CUAAGUAGU(GGCGA)G F.flexilis 600 CGA-ACG-GGAA-UUA-GCCCAAAccgaag-uugu----------(uacg F.flexilis 650 -)----------gcaaauucggnguuguaggacuggaa------------ F.flexilis 700 -------------------------------uaauaaauuaaaacaga-a F.flexilis 750 uaaGAAu-gcg-u(u-gggaa)g-cgcaAC|c(gua)gaGGG(UGAUAGU F.flexilis 800 )CCCGU-Auug-gu-aauguuuuauuuuag-------------------- F.flexilis 850 ----uucaguauccu---GAGUAAGGCGGGG(UCGGAG-ACG)CCCUGUC F.flexilis 900 UNAAUCC-ACC-GG(CACCAU)CC-GGU-NAGGCUAA----AUACUACUG F.flexilis 950 AGAGACCGAUAGUG-AAC-AAGUACU(GUGA)-AGGA-AAGGUGAAAA-G F.flexilis 1000 UACCUC(GAAUA-)GAGGG--GUGAAA--AGAACCUGAAACCAU-GCGCN F.flexilis 1050 UACAA-G-CGGUCGGAGCCA--CG--------------(-----uga--) F.flexilis 1100 --------------UG-UGGUGACGGCGUGCCU(UUU-GCAU|A)AUGA| F.flexilis 1150 -GCCUACGAGUUACGUCUC-AUCGGC-AAGGUUAAGGac(-cuaag)guC F.flexilis 1200 U-GGAGCCGGAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- F.flexilis 1250 --------------------------u-aaG-UCGGUGGGAGUA-GACGC F.flexilis 1300 GAAAC-CUU-GUGA-UCUACCCUUGGG|CAGGUUGAAGGUUGGG(UAAA) F.flexilis 1350 AC-CAACUGGAGGACCGAACU-GAUAAGC(-GUUGAAAA)GCUUC|CGG- F.flexilis 1400 AUGAC-CUGAGGCUAGGGGU(-GAAAG)GCUNAUCAAACUGGGAAAUAGC F.flexilis 1450 UCGUACUCAUCGAAAUGUCU(-UUAG)GGACAGC|-CUCGAGguag--a| F.flexilis 1500 -gug|ucaAGG|AGGUAG|AGCuACCGA-UAGGACUA-GG|-GGGNC(uu F.flexilis 1550 cac)CGCCUACCAAAUCCUN-ACGAACUCCGAA-UG-|CCUau-g-a--- F.flexilis 1600 cau----au|aCU-CGGGAGUGAGGG--CAU-GGGU(GCUAAG)GUCCAU F.flexilis 1650 -GUCC-GAGAGGG(-AAAGAA-)CCCUNACCGUCAGCUAAG-GU|CCCC- F.flexilis 1700 AAAUC-UAUU-C-UAA-GUu----gaacAAAGGUGGUGnCAGUUGCAGA- F.flexilis 1750 GACAGCCAGGAUGUUGGC(UUGGAAGCA)GCCAUUCAU|U(UAA)A|GAG F.flexilis 1800 UGC(GUAACA)GC|UCACUGGU-----CGAGC-GAC-AG-CNGC|AUCga F.flexilis 1850 uaau-aaac--gggcaucaAGAAUA-G|U|ACCGAAGCU|ACGG|acua- F.flexilis 1900 -------(guaa-------------------------------------- F.flexilis 1950 -------------------------------------------------- F.flexilis 2000 -------------------------------------------------- F.flexilis 2050 -------------------------------------------------- F.flexilis 2100 -------------------------------------------------- F.flexilis 2150 -----------------------------------)---------uagu- F.flexilis 2200 GG-UAGAUGAG|-----CAUU-CUG-AC---------------------- F.flexilis 2250 -------------------------------------------------- F.flexilis 2300 --------------------------------A-UCAA-UGAAGCUG-C- F.flexilis 2350 A-UG(-GUCA-)UGU--GUGGUGG|AGAGGU-CAGAAAAGCAAAUGU-AG F.flexilis 2400 GC|AUA-AGUA--ACGAUAAUGCGUG(UGAGAAA)CAUGCA|CGCC-GAU F.flexilis 2450 AGACUAAGGUUUCCUGUAUCAACG-(UUAAU)CG|G-AUCAGGGUUAGU| F.flexilis 2500 CGG|G-GCCUNAGGUAUAGGC(GAAG)-G-CCNA-AGCCGAUGG-ACAAC F.flexilis 2550 GGG-(UU-AAUAUU)C-CCGU|AC|ua-a-au-aau-uga---------- F.flexilis 2600 -------------------------------------------------- F.flexilis 2650 -------------------------------------------------- F.flexilis 2700 ------gcgaa------gugg--aga-cggagugaugaa-aggu-u-|cg F.flexilis 2750 c-gga(cu-gauggaauag---)uu-cguu-|gaa--------------- F.flexilis 2800 ---gacc-guaacua-----uauuggg-uguagg(ca-aa-u-)cc|g-- F.flexilis 2850 caucuga-------------uggu-gaaagucg-auag|-ua-|------ F.flexilis 2900 --ugcaaagcc(-uucg--)ggcagcgca-------au----aguga-cc F.flexilis 2950 cuaa-ggg-|cuuccaagaaa-aacugc-uaagcaua---------uu-g F.flexilis 3000 -auugu--uua|c|CCGUACCGCAAACC(GACACA)GG|UAG-UCAAGG- F.flexilis 3050 A-(GAGAA)UCCUGAGGCGC||UCGAAUGAAUCACGGUU----------- F.flexilis 3100 ----AAGGAACUCGGCAAAAUAACCCUGUAAC(-UUCG)GGAGAAGGGGA F.flexilis 3150 |GCCUa---------------------ccca(-gcga-)uggg------- F.flexilis 3200 --------------AGG-U|C(GCA)GAGAAAUGGCC-CAGG|CGACU-- F.flexilis 3250 ---GU(UUACCAAAA)ACACAUGGCUUUG|CGAAAAC(GAGA------)G F.flexilis 3300 UUGAAGU-AUAAGGCCUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA F.flexilis 3350 GGGGAUGUUAGUc-------(G-CAA)----g------GCGA-AGCAUUG F.flexilis 3400 AAUCGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( F.flexilis 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA F.flexilis 3500 AUGGUGUAACGA-UCUGGGCGCUGUCUCAACCGUGAGUUCG|GUGAAAUU F.flexilis 3550 |GUAGUAG-CGG(UGAAGAUG)CCGCNUACCCGCAAC-GGGACGGAAAGA F.flexilis 3600 CCCCGUGC|ACCU-UUACUAU|AGCUUUACAUU|GACUUCGGAUAACAGA F.flexilis 3650 UGUGUAGGAUAGGUGGGAGGCUGUGAAA--UAGUGUC(GCUA)GGCAUUA F.flexilis 3700 UGGAGCCAAC-G-UUGAAAUACCACC|CUUA-UGUUAUUUGGA-GCCUAA F.flexilis 3750 -Ugc-c---------(-cag-agc)------gg-A-GACAUUGUAUGGUG F.flexilis 3800 GG-UNGUUUGACUG(NNG)NNGUC|GCCUCC(AAA-AAAGUAUC)GGAGG F.flexilis 3850 C|N|U|UCAAAGGUACCC|UCAGCACGC(UUGGUAA)CCGUGCGCA-GA| F.flexilis 3900 GU(G|CAAUG)GCAUAAGGGNCCUUGACUGUGAGAC(CGACAA)GUCGAG F.flexilis 3950 CAGGUAC(GAAA)GU-AGGA|CAUAGUGAUCCGGUNGUUCCG(CAUGGA) F.flexilis 4000 AGG|GCCAUCGCUCAAA|GGAUAAAAGGUACGN|NNNN|NAUAACAG|GC F.flexilis 4050 UGA--UCUCCCCCAAGA(G-CUC-ACA)UCGACGGGG-AGGU-UUGGCAC F.flexilis 4100 CUCGAUGUC|GGCU|C|GUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU F.flexilis 4150 CCCAAGGGU|UGGNC(UNUUC)GC-CGAUUAAAGUGGCACG-CGAGCUGG F.flexilis 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GUUGCG F.flexilis 4250 G-G|CG-UAGGAAUUUU|GA-|GGGGGGC-UGA--------------CCU F.flexilis 4300 (UAGUAC(GAGA)GGACC)GGGUUGG|ACGUACCGCUGGUGUAUCGGU|U F.flexilis 4350 GUAUU(GC-CC-)AGUGCA-UUGCCGAGUAGCU-AAGUGCGGAAGAGAUA F.flexilis 4400 AGUGCU(GAAAGCAUCUA)AGUACGAAACUCGCCCC|AAGAUGAGAAUUC F.flexilis 4450 C|cu|------(------)--------ua-aagg|--U|CGUUG-(GAGA F.flexilis 4500 UG-A)CAACG-UUGAUAG|GUUGC|AGGUG-Unnnnnnn--(nnnn-)-- F.flexilis 4550 nnnnn|nn-nnnnn|n|nnnnnnnnnnnn-nnnnnnnnn|nnnnnn-nnn F.flexilis 4600 --------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.flexilis 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.flexilis 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.flexilis 4750 ~~~|||||| GREENSULFU 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ GREENSULFU 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ GREENSULFU 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ GREENSULFU 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- GREENSULFU 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ GREENSULFU 350 -------------------------------------------------- GREENSULFU 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ GREENSULFU 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ GREENSULFU 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ GREENSULFU 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ GREENSULFU 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ GREENSULFU 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ GREENSULFU 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ GREENSULFU 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ GREENSULFU 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| GREENSULFU 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ GREENSULFU 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ GREENSULFU 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ GREENSULFU 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| GREENSULFU 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ GREENSULFU 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ GREENSULFU 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ GREENSULFU 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- GREENSULFU 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ GREENSULFU 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ GREENSULFU 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ GREENSULFU 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- GREENSULFU 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ GREENSULFU 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ GREENSULFU 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| GREENSULFU 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ GREENSULFU 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ GREENSULFU 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ GREENSULFU 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- GREENSULFU 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ GREENSULFU 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ GREENSULFU 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ GREENSULFU 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- GREENSULFU 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ GREENSULFU 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- GREENSULFU 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ GREENSULFU 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ GREENSULFU 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( GREENSULFU 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ GREENSULFU 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ GREENSULFU 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ GREENSULFU 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ GREENSULFU 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ GREENSULFU 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ GREENSULFU 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) GREENSULFU 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| GREENSULFU 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ GREENSULFU 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ GREENSULFU 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ GREENSULFU 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- GREENSULFU 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ GREENSULFU 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ GREENSULFU 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ GREENSULFU 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ GREENSULFU 4500 ~~~~~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~-~~~~~~~~~~~~~~ GREENSULFU 4550 ~--~~~~~~|~~~~|~~~-~|~~~~~~~~~~~~~~~~~--~~~|~~~~~~ GREENSULFU 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ GREENSULFU 4750 ~~~~||||| C.limicola 0 -------------------------------------------------- C.limicola 50 ----------------------------|---------GGUUAAGUUAC- C.limicola 100 --UAAGGGCGUACGGUGGAUG|CCUUGG|CACAAGA|AG|GC-GACGAAG C.limicola 150 GA|CGUG(GUUUAAC-)U|-GCG-AAAAGCUGCGGG|-GAGGC(G-UA-A C.limicola 200 ACA-)GCCUNAU-AUC-CGCAGAUC|UCCGAAUGGG(GCAA)CCC|ACCU C.limicola 250 C---(--------------------------------------------- C.limicola 300 -------------------------------------------------- C.limicola 350 -------------------------------------------------- C.limicola 400 -------------------------------------------------- C.limicola 450 ----guaa)---GAGGU-AUUC-C-----(---GUAA-----)------G C.limicola 500 -G-A--AGG-C-AAAC|CC-GGGGAAGU|GA(AACA)UCUCAGUA-CCUG C.limicola 550 GAGGAAAAGAAAAC(-AAAA--)GUGAU|UUC-CUGAGUAGC(GGCGA)G C.limicola 600 CGA-AAA-GGAA-CAA-GCCCAAAccgaugucugu----------(uucg C.limicola 650 -)----------gcagcgucgggguuguaggacucc-------------- C.limicola 700 -----------------------------auaacgugacagcgaucgaua C.limicola 750 gcaGAAc-uac-c(u-ggaaa)g-guaggc|c(aga)gaAGG(UGAAAGC C.limicola 800 )CCUGU-Aggc-gaaaucgugaacugcacagg------------------ C.limicola 850 -------aggauccu---GAGUAGCACGGGG(UACGUG-AGG)UCCUGUG C.limicola 900 UGAACCA-GCG-AG(AACCAU)CU-CGU-AAGGCUAA----AUACUCUCU C.limicola 950 UGUGACCGAUAGUG-AAC-CAGUACC(GUAA)-GGGA-AAGGUGAAAA-G C.limicola 1000 UACCCU(UAAGA-)AGGGA--GUGAAA-UAGUACCUGAAACCGU-ACGCN C.limicola 1050 NACAAAA-CUGUAGGAGCUa-acc-acc----------(----uucg--) C.limicola 1100 -----------ggugg-guGUGACUGCGUGCCU(NUU-GCAU|A)AUGA| C.limicola 1150 -GCCUACGAGUUACUGGUA-UGUUGC-GAGGUUAAGGUU(--UUCA)GAC C.limicola 1200 C-GGAGCCGCAGC(GAAA-)GCGAGUUC(GAA-CA)GAGCGA-------- C.limicola 1250 ----------------------------gaG-UAACAUGCCGUA-GACGC C.limicola 1300 GAAAC-CAA-GUGA-UCUAUCCUUGAU|CAGGAUGAAGUAUGGG(UAAA) C.limicola 1350 AC-CAUAUGGAGGUCCGAACC-AGUGUGG(-GUUGAAAA)CCGCU|UGG- C.limicola 1400 AUGAA-UUGAGGAUAGGGGU(-GAAAG)GCCAAUCAAACUUGGUNAUAGC C.limicola 1450 UCGUACUCCCCNAAAUGUCU(-UGAG)GGACAGC|-CUCGGGnncg--A| C.limicola 1500 -GUC|ugccgg|AGGUAG|AGCUaccaa-UUGGGCUA-gg|-gcugu(ca C.limicola 1550 ca-)acgguaccaaacccag-augAACUCCGAA-UG-|CCG-g-u-a--U C.limicola 1600 GAC----au|aCC-CGGGAGUGAGGG--CAU-GAGC(GAUAAG)GUCCAU C.limicola 1650 -GUCC-GAGAGGG(-AAACAA-)CCCAGAACCACAGCUAAG-GC|CCCN- C.limicola 1700 NAAUU-CACG-C-UnA-GUg----uauuAAAGAUUGUU-UGAUUGCUCA- C.limicola 1750 GACAGCUAGGAUGUUGGC(UUAGAAGCA)GCCAC-CAU|U(UAA)A|GAG C.limicola 1800 UGC(GUAAUA)GC|UCACUAGU-----CAAGC-GAU-CA--UGC|GUCGA C.limicola 1850 UAAU-A-CC-CGGGACU-AAGCGUG-G|U|GCCGAAGCU|UGGU|nauca C.limicola 1900 -------(uuua-------------------------------------- C.limicola 1950 -------------------------------------------------- C.limicola 2000 -------------------------------------------------- C.limicola 2050 -------------------------------------------------- C.limicola 2100 -------------------------------------------------- C.limicola 2150 -----------------------------------)--------ugauc- C.limicola 2200 GG-UAGGGGAG|-----CAUU-CCA-GU---------------------- C.limicola 2250 -------------------------------------------------- C.limicola 2300 --------------------------------U-GCGU-UGAAGGUG-U- C.limicola 2350 C-UG(-GUAA-)UGG--AUGCUGG|AGCGGC-UGGAAACGAACAUGU-AG C.limicola 2400 GC|AUG-AGUA--GCGAUAAACAAAG(UGAGAAA)CUUUGU|CACC-GAA C.limicola 2450 AAUCUAAGGUUUCCUG-AGCAAUG-(UUAAU)CA|A-CUCAGGGUUAGU| C.limicola 2500 CGG|G-ACCUAAGGUGAGGCC(GAAA)-G-GCGU-AGCCGAUGG-AAAAC C.limicola 2550 UGG-(UU-AAUAAU)C-CAGU|AC|cc-g-gu-cau-gaag--------- C.limicola 2600 -------------------------------------------------- C.limicola 2650 -------------------------------------------------- C.limicola 2700 guuauuacuac------gggg--uga-cgcagaagugaa-aggc-g-|ag C.limicola 2750 c-caa(cu-gacggacgug---)gu-gguu-|uaa--------------- C.limicola 2800 ---gugc-guaggc--------uggag-uguagg(ca-aa-u-)cc|g-- C.limicola 2850 cgcuccuuaa----------ggcu-gaaacacg-aaua|ggg-|------ C.limicola 2900 ------ugcuc(-guaa--)gagccgcaa-------cu-----cgcc-cu C.limicola 2950 aauc-cgg-|cugccgagaaa-agccuc-uaugggac---------ga-c C.limicola 3000 -augac--ugg|C|CCGUACCGUAAACC(GACACA)GG|UAG-AUGGGA- C.limicola 3050 U-(GAGUA)UUCUAAGGUGC||UCGAGUGAGACGCAGCU----------- C.limicola 3100 ----AAGGAACUCGGCAAAAUAGCCCCGUAAC(-UUCG)GGAGAAGGGGu C.limicola 3150 |-GCCU-----------------------ag(-auuu-)cu--------- C.limicola 3200 --------------AGG-C|C(GCA)GUGAAAUGGGU-CAAG|CGACU-- C.limicola 3250 ---GU(UUAACAAAA)ACACAUCUCUCUG|CCAAGAC(GAUU---UAA)G C.limicola 3300 UCGAUGU-AUAGGGAGUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGG C.limicola 3350 GGAUCUGUcAUC--------(G-CAA)-----------GAGA-aGCAGug C.limicola 3400 aACCNAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( C.limicola 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA C.limicola 3500 AUGGUGUAACGA-UUUGACCACUGUCUCGGCUGCGCGCUCG|GCGAAAUU C.limicola 3550 |GUAGUGC-CGG(UGAAGAUG)CCGNNNACUCGCAUC-UGGACGGAAAGA C.limicola 3600 CCCUAUGC|ACCU-UUACUAU|AACCUGGCAUU|GGGCUUGAGCAUGAUU C.limicola 3650 UGUGUAGAAUAGGUGGGAGACUUUGAAG--CGGGAGC(GUCA)GCUUCCG C.limicola 3700 UGGAGUCGCAaU-GUGAAAUACCACC|CUGG-UUGUGUUUGAG-UCCUAA C.limicola 3750 -CUUCGG----CGAG(-uun-AUC)-CUCGCUAAG-GACCAUGUCAGGCG C.limicola 3800 GG-UAGUUUGACUG(GNN)NNGUC|GCCUCC(UAA-AAAGUAAC)GGAGG C.limicola 3850 C|U|U|ACAAAGGUUCAC|UCAGUUCCG(UCGGUAA)UGGAACGUA-GA| C.limicola 3900 GC(A|UAAUG)GUACAAGUGAGCUUGACUGUGAGAC(CGACAG)GUCGAG C.limicola 3950 CAGGAAC(GAAA)GU-UGGU|CAUAGUGAUCCGGUGGUCCCG(CAUGGA) C.limicola 4000 AGG|GCCAUCGCUCAUA|GGAUAAAAGGUACGC|UAGG|GAUAACAG|GC C.limicola 4050 UGA--UCCCCGCCGAGA(G-UUC-AUA)UCGACGUGG-GNNU-UUGGCAC C.limicola 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU C.limicola 4150 CCCAAGGGU|CCGGC(UNUUC)GC-CGGUUAAAGUGGUACG-UGAGCUGG C.limicola 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CC|GAUGCG C.limicola 4250 A-G|CG-CAGGAAAUUU|GA-|GAGGGCU-UGU--------------CCU C.limicola 4300 (UAGUAC(GAGA)GGACC)GGGACGA|ACAAACCUCUGGUGCACCAGU|U C.limicola 4350 GUCAC(GC-CA-)GUGGCA-UGGCUGGGUAGCU-AUGUUUGGUNNnnnnn C.limicola 4400 nnnnnn(nnnnnnnnnnn)nnnnnnnnnnnnnnnnn|nnnnnnnnnnnnn C.limicola 4450 n|nn|------(------)---------n-nnnn|-nn|nnnnn-(nnnn C.limicola 4500 nn-n)nnnnn-nnnnnnn|nnnnn|nnnnn-nnnnnnnnnn(nnnn-)-- C.limicola 4550 nnnnn|nn-nnnnn|n|nnnnnnnnnnnn-nnnnnnnnn|nnnnnn-nnn C.limicola 4600 n-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.limicola 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.limicola 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.limicola 4750 ~~~|||||| PLANCTOMYC 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ PLANCTOMYC 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ PLANCTOMYC 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ PLANCTOMYC 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- PLANCTOMYC 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ PLANCTOMYC 350 -------------------------------------------------- PLANCTOMYC 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ PLANCTOMYC 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ PLANCTOMYC 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ PLANCTOMYC 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ PLANCTOMYC 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ PLANCTOMYC 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ PLANCTOMYC 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PLANCTOMYC 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| PLANCTOMYC 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PLANCTOMYC 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ PLANCTOMYC 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ PLANCTOMYC 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| PLANCTOMYC 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ PLANCTOMYC 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ PLANCTOMYC 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ PLANCTOMYC 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- PLANCTOMYC 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ PLANCTOMYC 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ PLANCTOMYC 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ PLANCTOMYC 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- PLANCTOMYC 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ PLANCTOMYC 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ PLANCTOMYC 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| PLANCTOMYC 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ PLANCTOMYC 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ PLANCTOMYC 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ PLANCTOMYC 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- PLANCTOMYC 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ PLANCTOMYC 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ PLANCTOMYC 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ PLANCTOMYC 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- PLANCTOMYC 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PLANCTOMYC 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- PLANCTOMYC 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ PLANCTOMYC 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ PLANCTOMYC 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( PLANCTOMYC 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ PLANCTOMYC 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ PLANCTOMYC 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PLANCTOMYC 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ PLANCTOMYC 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ PLANCTOMYC 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ PLANCTOMYC 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) PLANCTOMYC 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| PLANCTOMYC 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ PLANCTOMYC 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ PLANCTOMYC 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ PLANCTOMYC 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- PLANCTOMYC 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ PLANCTOMYC 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ PLANCTOMYC 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ PLANCTOMYC 4500 ~~~~~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~-~~~~~~~~~~~~~~ PLANCTOMYC 4550 ~--~~~~~~|~~~~|~~~-~|~~~~~~~~~~~~~~~~~--~~~|~~~~~~ PLANCTOMYC 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PLANCTOMYC 4750 ~~~~||||| C.pneumo.1 0 -------------------------------------------------- C.pneumo.1 50 ----------------------------|-----UACAGACCAAGUUGU- C.pneumo.1 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.pneumo.1 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGU|-GAGCU(G-GU-A C.pneumo.1 200 UAG-)AGCUAUG-ACC-CGGAGGUA|UCCGAAUGGG(GCAA)CCC|gaua C.pneumo.1 250 gac-(--------------------------------------------- C.pneumo.1 300 -------------------------------------------------- C.pneumo.1 350 -------------------------------------------------- C.pneumo.1 400 -------------------------------------------------- C.pneumo.1 450 ---uaaua)-gucuauc-AUUA-UAUGUU(GA-AUACA--UA)GGC-AUA C.pneumo.1 500 -U-A--AGG-CGACAC|CC-GCUGAACU|GA(AACA)UCUUAGUA-AGCG C.pneumo.1 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pneumo.1 600 CGA-AAG-GGGA-ACA-GCCUAAAccauau-u-------------(-uuu C.pneumo.1 650 -)-------------aauaugggguuguagggucgauaa----------- C.pneumo.1 700 ------------------------------caugggaucuuaaguuuu-a C.pneumo.1 750 guuGAAuacuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pneumo.1 800 )CCCGU-Aaac-gaaaaaacaa-aagacg--------------------- C.pneumo.1 850 --cuaaucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.pneumo.1 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.pneumo.1 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.pneumo.1 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pneumo.1 1050 UAUAA-G-CGGUCGGAGACC-uau---aac-uc-----(----uucg--) C.pneumo.1 1100 --------ga-guaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pneumo.1 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGAUUAAGGGA(uuuaca)UUC C.pneumo.1 1200 C-GGAGUCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pneumo.1 1250 --------------------------uuuaG-UCGUUUGAUUUA-GACAC C.pneumo.1 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pneumo.1 1350 AC-UUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.pneumo.1 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pneumo.1 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pneumo.1 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pneumo.1 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.1 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pneumo.1 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pneumo.1 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pneumo.1 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pneumo.1 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pneumo.1 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pneumo.1 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pneumo.1 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pneumo.1 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pneumo.1 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pneumo.1 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pneumo.1 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pneumo.1 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pneumo.1 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pneumo.1 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pneumo.1 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pneumo.1 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pneumo.1 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pneumo.1 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pneumo.1 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pneumo.1 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pneumo.1 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pneumo.1 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pneumo.1 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pneumo.1 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pneumo.1 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pneumo.1 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pneumo.1 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pneumo.1 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.1 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pneumo.1 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pneumo.1 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pneumo.1 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pneumo.1 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pneumo.1 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pneumo.1 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pneumo.1 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pneumo.1 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pneumo.1 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.1 4750 ~~~|||||| C.pneumo.2 0 -------------------------------------------------- C.pneumo.2 50 ----------------------------|-----UACAGACCAAGUUGU- C.pneumo.2 100 --UAAGAGCUAUUGGCGGAUG|CCUUGC|CAUUGAC|AG|GC-GAUGAAG C.pneumo.2 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGU|-GAGCU(G-GU-A C.pneumo.2 200 UAG-)AGCUAUG-ACC-CGGAGGUA|UCCGAAUGGG(GCAA)CCC|gaua C.pneumo.2 250 gac-(--------------------------------------------- C.pneumo.2 300 -------------------------------------------------- C.pneumo.2 350 -------------------------------------------------- C.pneumo.2 400 -------------------------------------------------- C.pneumo.2 450 ---uaaua)-gucuauc-AUUA-UAUGUU(GA-AUACA--UA)GGC-AUA C.pneumo.2 500 -U-A--AGG-CGACAC|CC-GCUGAACU|GA(AACA)UCUUAGUA-AGCG C.pneumo.2 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pneumo.2 600 CGA-AAG-GGGA-ACA-GCCUAAAccauau-u-------------(-uuu C.pneumo.2 650 -)-------------aauaugggguuguagggucgacaa----------- C.pneumo.2 700 ------------------------------caugggaucuuaaguuuu-a C.pneumo.2 750 guuGAAuacuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pneumo.2 800 )CCCGU-Aaac-gaaaaaacaa-aagacg--------------------- C.pneumo.2 850 --cuaaucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.pneumo.2 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.pneumo.2 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.pneumo.2 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pneumo.2 1050 UAUAA-G-CGGUCGGAGACC-uau---aac-uc-----(----uucg--) C.pneumo.2 1100 --------ga-guaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pneumo.2 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGAUUAAGGGA(uuuaca)UUC C.pneumo.2 1200 C-GGAGUCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pneumo.2 1250 --------------------------uuuaG-UCGUUUGAUUUA-GACAC C.pneumo.2 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pneumo.2 1350 AC-UUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.pneumo.2 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pneumo.2 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pneumo.2 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pneumo.2 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.2 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pneumo.2 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pneumo.2 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pneumo.2 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pneumo.2 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pneumo.2 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pneumo.2 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pneumo.2 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pneumo.2 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pneumo.2 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pneumo.2 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pneumo.2 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pneumo.2 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pneumo.2 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pneumo.2 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pneumo.2 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pneumo.2 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pneumo.2 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pneumo.2 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pneumo.2 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pneumo.2 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pneumo.2 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pneumo.2 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pneumo.2 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pneumo.2 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pneumo.2 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pneumo.2 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pneumo.2 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pneumo.2 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.2 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pneumo.2 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pneumo.2 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pneumo.2 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pneumo.2 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pneumo.2 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pneumo.2 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pneumo.2 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pneumo.2 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pneumo.2 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.2 4750 ~~~|||||| C.pneumo.3 0 -------------------------------------------------- C.pneumo.3 50 ----------------------------|-----UACAGACCAAGUUGU- C.pneumo.3 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.pneumo.3 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGU|-GAGCU(G-GU-A C.pneumo.3 200 UAG-)AGCUAUG-ACC-CGGAGGUA|UCCGAAUGGG(GCAA)CCC|gaua C.pneumo.3 250 gac-(--------------------------------------------- C.pneumo.3 300 -------------------------------------------------- C.pneumo.3 350 -------------------------------------------------- C.pneumo.3 400 -------------------------------------------------- C.pneumo.3 450 ---uaaua)-guccauc-AUUA-UAUGUU(GA-AUACA--UA)GGC-AUA C.pneumo.3 500 -U-A--AGG-CGACAC|CC-GCUGAACU|GA(AACA)UCUUAGUA-AGCG C.pneumo.3 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pneumo.3 600 CGA-AAG-GGGA-ACA-GCCUAAAccauau-u-------------(-uuu C.pneumo.3 650 -)-------------aauaugggguuguagggucgauaa----------- C.pneumo.3 700 ------------------------------caugggaucuuaaguuuu-a C.pneumo.3 750 guuGAAuacuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pneumo.3 800 )CCCGU-Uaac-gaaaaaacaa-aagacg--------------------- C.pneumo.3 850 --cuaaucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.pneumo.3 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.pneumo.3 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.pneumo.3 1000 AACCCU(uguua-)AGGGA--GCGAAA-UAGAACCUGAAACCAG-UAGCU C.pneumo.3 1050 UAUAA-G-CGGUCGGAGACC-uau---aac-uc-----(----uucg--) C.pneumo.3 1100 --------ga-guaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pneumo.3 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GGGAUUAAGGGA(uuuaca)UUC C.pneumo.3 1200 C-GGAGUCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pneumo.3 1250 --------------------------uuuaG-UCGUUUGAUUUA-GACAC C.pneumo.3 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pneumo.3 1350 AC-UUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.pneumo.3 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pneumo.3 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pneumo.3 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pneumo.3 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.3 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pneumo.3 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pneumo.3 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pneumo.3 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pneumo.3 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pneumo.3 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pneumo.3 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pneumo.3 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pneumo.3 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pneumo.3 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pneumo.3 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pneumo.3 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pneumo.3 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pneumo.3 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pneumo.3 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pneumo.3 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pneumo.3 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pneumo.3 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pneumo.3 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pneumo.3 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pneumo.3 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pneumo.3 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pneumo.3 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pneumo.3 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pneumo.3 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pneumo.3 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pneumo.3 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pneumo.3 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pneumo.3 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.3 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pneumo.3 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pneumo.3 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pneumo.3 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pneumo.3 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pneumo.3 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pneumo.3 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pneumo.3 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pneumo.3 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pneumo.3 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.3 4750 ~~~|||||| C.pneumo.4 0 -------------------------------------------------- C.pneumo.4 50 ----------------------------|-----UACAGACCAAGUUGU- C.pneumo.4 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.pneumo.4 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGU|-GAGCU(G-GU-A C.pneumo.4 200 UAG-)AGCUAUG-ACC-CGGAGGUA|UCCGAAUGGG(GCAA)CCC|gaua C.pneumo.4 250 gac-(--------------------------------------------- C.pneumo.4 300 -------------------------------------------------- C.pneumo.4 350 -------------------------------------------------- C.pneumo.4 400 -------------------------------------------------- C.pneumo.4 450 ---uaaua)-gucuauc-AUUA-UAUGUU(GA-AUACA--UA)GGC-AUA C.pneumo.4 500 -U-A--AGG-CGACAC|CC-GCUGAACU|GA(AACA)UCUUAGUA-AGCG C.pneumo.4 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pneumo.4 600 CGA-AAG-GGGA-ACA-GCCUAAAccauau-u-------------(-uuu C.pneumo.4 650 -)-------------aauaugggguuguagggucgauaa----------- C.pneumo.4 700 ------------------------------caugggaucuuaaguuuu-a C.pneumo.4 750 guuGAAuacuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pneumo.4 800 )CCCGU-Aaac-gaaaaaacaa-aagacg--------------------- C.pneumo.4 850 --cuaaucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.pneumo.4 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.pneumo.4 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.pneumo.4 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pneumo.4 1050 UAUAA-G-CGGUCGGAGACC-uau---aac-uc-----(----uucg--) C.pneumo.4 1100 --------ga-guaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pneumo.4 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGAUUAAGGGA(uuuaca)UUC C.pneumo.4 1200 C-GGAGUCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pneumo.4 1250 --------------------------uuuaG-UCGUUUGAUUUA-GACAC C.pneumo.4 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pneumo.4 1350 AC-UUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.pneumo.4 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pneumo.4 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pneumo.4 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pneumo.4 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.4 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pneumo.4 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pneumo.4 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pneumo.4 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pneumo.4 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pneumo.4 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pneumo.4 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pneumo.4 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pneumo.4 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pneumo.4 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pneumo.4 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pneumo.4 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pneumo.4 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pneumo.4 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pneumo.4 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pneumo.4 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pneumo.4 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pneumo.4 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pneumo.4 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pneumo.4 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pneumo.4 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pneumo.4 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pneumo.4 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pneumo.4 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pneumo.4 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pneumo.4 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pneumo.4 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pneumo.4 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pneumo.4 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.4 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pneumo.4 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pneumo.4 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pneumo.4 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pneumo.4 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pneumo.4 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pneumo.4 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pneumo.4 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pneumo.4 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pneumo.4 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.4 4750 ~~~|||||| C.pneumo.5 0 -------------------------------------------------- C.pneumo.5 50 ----------------------------|-----UACAGACCAAGUUGU- C.pneumo.5 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.pneumo.5 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGU|-GAGCU(G-GU-A C.pneumo.5 200 UAG-)AGCUAUG-ACC-CGGAGGUA|UCCGAAUGGG(GCAA)CCC|gaua C.pneumo.5 250 gac-(--------------------------------------------- C.pneumo.5 300 -------------------------------------------------- C.pneumo.5 350 -------------------------------------------------- C.pneumo.5 400 -------------------------------------------------- C.pneumo.5 450 ---uaaua)-gucuauc-AUUA-UAUGUU(GA-AUACA--UA)GGC-AUA C.pneumo.5 500 -U-A--AGG-CGACAC|CC-GCUGAACU|GA(AACA)UCUUAGUA-AGCG C.pneumo.5 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pneumo.5 600 CGA-AAG-GGGA-ACA-GCCUAAAccauau-u-------------(-uuu C.pneumo.5 650 -)-------------aauaugggguuguagggucgauaa----------- C.pneumo.5 700 ------------------------------caugggaucuuaaguuuu-a C.pneumo.5 750 guuGAAuacuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pneumo.5 800 )CCCGU-Aaac-gaaaaaacaa-aagacg--------------------- C.pneumo.5 850 --cuaaucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.pneumo.5 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.pneumo.5 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.pneumo.5 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pneumo.5 1050 UAUAA-G-CGGUCGGAGACC-uau---aac-uc-----(----uucg--) C.pneumo.5 1100 --------ga-guaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pneumo.5 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGAUUAAGGGA(uuuaca)UUC C.pneumo.5 1200 C-GGAGUCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pneumo.5 1250 --------------------------uuuaG-UCGUUUGAUUUA-GACAC C.pneumo.5 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pneumo.5 1350 AC-UUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.pneumo.5 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pneumo.5 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pneumo.5 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pneumo.5 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.5 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pneumo.5 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pneumo.5 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pneumo.5 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pneumo.5 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pneumo.5 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pneumo.5 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pneumo.5 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pneumo.5 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pneumo.5 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pneumo.5 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pneumo.5 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pneumo.5 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pneumo.5 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pneumo.5 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pneumo.5 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pneumo.5 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pneumo.5 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pneumo.5 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pneumo.5 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pneumo.5 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pneumo.5 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pneumo.5 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pneumo.5 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pneumo.5 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pneumo.5 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pneumo.5 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pneumo.5 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pneumo.5 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.5 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pneumo.5 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pneumo.5 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pneumo.5 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pneumo.5 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pneumo.5 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pneumo.5 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pneumo.5 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pneumo.5 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pneumo.5 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.5 4750 ~~~|||||| C.pneumo.6 0 -------------------------------------------------- C.pneumo.6 50 ----------------------------|-----UACAGACCAAGUUGU- C.pneumo.6 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.pneumo.6 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGU|-GAGCU(G-GU-A C.pneumo.6 200 UAG-)AGCUAUG-ACC-CGGAGGUA|UCCGAAUGGG(GCAA)CCC|gaua C.pneumo.6 250 gac-(--------------------------------------------- C.pneumo.6 300 -------------------------------------------------- C.pneumo.6 350 -------------------------------------------------- C.pneumo.6 400 -------------------------------------------------- C.pneumo.6 450 ---uaaua)-gucuauc-AUUA-UAUGCU(GA-AUACA--UA)GGC-AUA C.pneumo.6 500 -U-A--AGG-CGACAC|CC-GUUGAACU|GA(AACA)UCUUAGUA-AGCG C.pneumo.6 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pneumo.6 600 CGA-AAG-GGGA-ACA-GCCUAAAccauau-u-------------(-uuu C.pneumo.6 650 -)-------------aauaugggguuguagggucgauaa----------- C.pneumo.6 700 ------------------------------caugggaucuuaaguuuu-a C.pneumo.6 750 guuGAAuacuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pneumo.6 800 )CCCGU-Aaac-gaaaaaacaa-aaggca--------------------- C.pneumo.6 850 --cuaaucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.pneumo.6 900 UGAAUCU-GGG-GA(GACCAC)UC-UCU-AAGGCUAA----AUACUAGUC C.pneumo.6 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.pneumo.6 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pneumo.6 1050 UAUAA-G-CGGUCGGAGACC-uau---aac-uc-----(----uucg--) C.pneumo.6 1100 --------ga-guaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pneumo.6 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGAUUAAGGGA(uuuaca)UUC C.pneumo.6 1200 C-GGAGUCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pneumo.6 1250 --------------------------uuuaG-UCGUUUGAUUUA-GACAC C.pneumo.6 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUAAAGCAUUGG(UAAG) C.pneumo.6 1350 AC-UUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.pneumo.6 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pneumo.6 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pneumo.6 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pneumo.6 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.6 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pneumo.6 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pneumo.6 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pneumo.6 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pneumo.6 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pneumo.6 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pneumo.6 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pneumo.6 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pneumo.6 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pneumo.6 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pneumo.6 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pneumo.6 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pneumo.6 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pneumo.6 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pneumo.6 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pneumo.6 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pneumo.6 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pneumo.6 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pneumo.6 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pneumo.6 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pneumo.6 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pneumo.6 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pneumo.6 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pneumo.6 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pneumo.6 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pneumo.6 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pneumo.6 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pneumo.6 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pneumo.6 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pneumo.6 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pneumo.6 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pneumo.6 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pneumo.6 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pneumo.6 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pneumo.6 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pneumo.6 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pneumo.6 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pneumo.6 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pneumo.6 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pneumo.6 4750 ~~~|||||| C.trach.01 0 -------------------------------------------------- C.trach.01 50 ----------------------------|-----UACAGACCAAGUUAA- C.trach.01 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.01 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.01 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.01 250 gag-(--------------------------------------------- C.trach.01 300 -------------------------------------------------- C.trach.01 350 -------------------------------------------------- C.trach.01 400 -------------------------------------------------- C.trach.01 450 ---uaaua)-gacuacc-AUUG-CAUGCU(GA-AUACA--UA)GGU-AUG C.trach.01 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.01 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.01 600 CGA-AAG-GGGA-AUA-GCCUAAAccgagc-u-------------(gaua C.trach.01 650 a)-------------ggcucgggguuguaggauugagga----------- C.trach.01 700 ------------------------------uaaaggaucaggacuccu-a C.trach.01 750 guuGAAcacau-c(u-ggaaa)g-auggau|g(aua)caGGG(UGAUAGU C.trach.01 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.01 850 -gacc-ucaacaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.01 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.01 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.01 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.01 1050 UACAA-G-CGGUCGGAGACC-aau----ggccc-----(----guaa--) C.trach.01 1100 --------ggguc-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.01 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uauaca)UUC C.trach.01 1200 C-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGA-------- C.trach.01 1250 --------------------------a-gaG-UCGUUUGGUUUA-GACAC C.trach.01 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.01 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.01 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)GCCAAUCAAACUUGGAGAUAUC C.trach.01 1450 UUGUUCUCUCCGAAAUAACU(-UUAG)GGUUAGC|-CUCGGAUa---au| C.trach.01 1500 aagc|UUUUGG|GGGUAG|AGC-ACUGA-AUUCUAGC-GG|-GGGCC(ua C.trach.01 1550 cc-)GGCUUACCAACGGAAA-UCAAACUCCGAA-UA-|CCA-G-A-A--- C.trach.01 1600 gc-----ga|GUC-CGGGAGAUAGAC--AGC-GGGG(GCUAAG)CUUCGU C.trach.01 1650 -UGUC-GAGAGGG(-GAACAG-)CCCAGACCGCCGAUUAAG-GU|CCCU- C.trach.01 1700 AAUUU-UAUG-C-UAA-GUG------GGUAAGGAAGUG-AUGAUUCGAA- C.trach.01 1750 GACAGUUGGAAUGUUGGC(UUAGAGGCA)GCAAU-CAU|U(UAA)A|GAG C.trach.01 1800 UGC(GUAACA)GC|UCACCAAU-----CGAGA-AUC-AU--UGC|GCCGA C.trach.01 1850 UAAU-AAA--CGGGACU-AAGCAUA-A|A|ACCGACAUC|GCGG|gugug C.trach.01 1900 uc-----(gauaa------------------------------------- C.trach.01 1950 -------------------------------------------------- C.trach.01 2000 -------------------------------------------------- C.trach.01 2050 -------------------------------------------------- C.trach.01 2100 -------------------------------------------------- C.trach.01 2150 -----------------------------------)------gacacgc- C.trach.01 2200 GG-UAGGAGAG|-----CGUA-GUA-UUC--------------------- C.trach.01 2250 -------------------------------------------------- C.trach.01 2300 --------------------------------A-GCAG-AGAAGGUG-U- C.trach.01 2350 A-CC(-GGAA-)GGA--GCGCUGG|AGCGGA-UACUAGUGAAGAUCCAUG C.trach.01 2400 GC|AUA-AGUA--ACGAUAAAGGGAG(UGAAAAU)CUCCCU|CGCC-GUA C.trach.01 2450 AGCCCAAGGUUUCCAG-GGUCAAG-(CUCGU)CU|U-CCCUGGGUUAGU| C.trach.01 2500 CGG|C-CCCUAAGUUGAGGCG(UAAC)-U-GCGU-AGACGAUGGAGCAGC C.trach.01 2550 AGG-(UUAAAUAUU)C-CUGC|AC|ca-c-cu-aaa-acu---------- C.trach.01 2600 -------------------------------------------------- C.trach.01 2650 -------------------------------------------------- C.trach.01 2700 ---auagcgaa------ggaa--uga-cggaguaaguua--agc-ac|gc C.trach.01 2750 g-gac(ga--uugg-a-aga--)gu-ccgu-|aga--------------- C.trach.01 2800 ---gcga-ugagaa--------cgguu-aguagg(ca-aa-u-)cc|g-- C.trach.01 2850 cuaacauaa-----------gauc-aggucgcg-auca|agg-|------ C.trach.01 2900 -----ggaauc(-uucg--)ggggaa----------ccgauggugug--g C.trach.01 2950 agcg-agg-|cuuucaagaaauaauuuc-ua-gcu------------g-u C.trach.01 3000 -ugaug--gug|a|CCGUACCA-AAACC(GACACA)GG|UGG-GCGAGA- C.trach.01 3050 U-(GAAUA)UUCUAAGGCGC||GCGAGAUAACUUUCGUU----------- C.trach.01 3100 ----AAGGAACUCGGCAAAUUAUCCCCGUAAC(-UUCG)GAAUAAGGGGA C.trach.01 3150 |GCCUU--uu-aggguga---------cuau(ggaacg)auag-g----- C.trach.01 3200 --a-gcccc-gg-GGGG-C|C(GCA)GAGAAAUGGCC-CAGG|CGACU-- C.trach.01 3250 ---GU(UUAGCAAAA)ACACAGCACUAUG|CAAACCU(cuaa------)G C.trach.01 3300 GGGAAGU-AUAUGGUGUGA-CGCCUGCCCAAU|GCCA-AAA-GGUUAAAG C.trach.01 3350 GGAUAUGUCAGCU-------(G-CAA)----------AGCGA-AGCAUUG C.trach.01 3400 AACCUAAGCC|CUGGUGAAU|-GGC|CGCCGU(AACUAUA)ACGGUG|C( C.trach.01 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA C.trach.01 3500 AUGGUGUAACGA-UCUGGGCACUGUCUCAACGAAAGACUCG|GUGAAAUU C.trach.01 3550 |GUAGUAG-CAG(UGAAGAUG)CUGUUUACCCGCGAA-AGGACGAAAAGA C.trach.01 3600 CCCCGUGA|ACCU-UUACUGU|ACUUUGGUAUU|GAUUUUUGGUUUGUUA C.trach.01 3650 UGUGUAGGAUAGCCAGGAGACUAAGAAC--ACUCUUC(UUCA)GGAGAGU C.trach.01 3700 GGGAGUCAAC-G-UUGAAAUACUGGU|CUUA-ACAAGCUGGGA-AUCUAA C.trach.01 3750 -cauuau----ucca(-uga-auc)-uggaagaug-GACAUUGCCAGACG C.trach.01 3800 GG-CAGUUUUACUG(GGG)CGGUA|UCCUCC(UAA-AAAGUAAC)GGAGG C.trach.01 3850 A|G|C|CCAAAGCUUAUU|UCAUCGUGG(UUGGCAA)UCACGAGUA-GA| C.trach.01 3900 GC(G|UAAAG)GUAUAAGAUAGGUUGACUGCAAGAC(CAACAA)GUCGAG C.trach.01 3950 CAGAGAC(GAAA)GU-CGGG|CUUAGUGAUCCGGCGGUGGAA(AGUGGA) C.trach.01 4000 AUC|GCCGUCGCUUAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC C.trach.01 4050 UGA--UCGCCACCAAGA(G-UUC-AUA)UCGACGUGG-CGGU-UUGGCAC C.trach.01 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGA---A)-GGU C.trach.01 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGCUGG C.trach.01 4200 GUUCA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CUCUAU-CC|UUCGUG C.trach.01 4250 G-G|CG-CAGGAUACUU|GA-|GAGGAGC-UGU--------------UCC C.trach.01 4300 (UAGUAC(GAGA)GGACC)GGAAUGG|ACGAACCAAUGGUGUGUCGGU|U C.trach.01 4350 GUUUU(GC-CA-)AGGGCA-UAGCCGGGUGGCUcACGUUCGGAAAGGAUA C.trach.01 4400 AGCAUU(GAAAGCAUCUA)AAUGCCAAGCCUCCCUC|AAGAUAAGGUAUC C.trach.01 4450 C|CA|------(------)--------AU-GAGA|-CU|CCAUG-(UAGA C.trach.01 4500 CU-A)CGUGG-UUGAUAG|GUUGG|AGGUG-UAAGCACA--(GUAA-)-- C.trach.01 4550 UGUGU|UC-AGCUA|A|CCAAUACUAAUA-AGUCCAAAG|ACUUGG-UCU C.trach.01 4600 U-------|uuuaugauuggaagagccgaaaggcaaagacaauaagaaaa C.trach.01 4650 agaguagagagugcaaguacguagaagacaagcuuuuaagcgucuauuag C.trach.01 4700 uauacgugaga-aacgaugccaggauuagcuuggugauaauagagagagg C.trach.01 4750 gaaa||||| C.trach.02 0 -------------------------------------------------- C.trach.02 50 ----------------------------|-----UACAGACCAAGUUAA- C.trach.02 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.02 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.02 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.02 250 gag-(--------------------------------------------- C.trach.02 300 -------------------------------------------------- C.trach.02 350 -------------------------------------------------- C.trach.02 400 -------------------------------------------------- C.trach.02 450 ---uaaua)-gacuacc-AUUG-CAUGCU(GA-AUACA--UA)GGU-AUG C.trach.02 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.02 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.02 600 CGA-AAG-GGGA-AUA-GCCUAAAccgagc-u-------------(gaua C.trach.02 650 a)-------------ggcucgggguuguaggauugagga----------- C.trach.02 700 ------------------------------uaaaggaucaggacuccu-a C.trach.02 750 guuGAAcacau-c(u-ggaaa)g-auggau|g(aua)caGGG(UGAUAGU C.trach.02 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.02 850 -gacc-ucaacaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.02 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.02 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.02 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.02 1050 UACAA-G-CGGUCGGAGACC-aau----ggccc-----(----guaa--) C.trach.02 1100 --------ggguc-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.02 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uauaca)UUC C.trach.02 1200 C-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGA-------- C.trach.02 1250 --------------------------a-gaG-UCGUUUGGUUUA-GACAC C.trach.02 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.02 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.02 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)GCCAAUCAAACUUGGAGAUAUC C.trach.02 1450 UUGUUCUCUCCGAAAUAACU(-UUAG)GGUUAGC|-CUCGGAUa---au| C.trach.02 1500 aagc|UUUUGG|GGGUAG|AGC-ACUGA-AUUCUAGC-GG|-GGGCC(ua C.trach.02 1550 cc-)GGCUUACCAACGGAAA-UCAAACUCCGAA-UA-|CCA-G-A-A--- C.trach.02 1600 gc-----ga|GUC-CGGGAGAUAGAC--AGC-GGGG(GCUAAG)CUUCGU C.trach.02 1650 -UGUC-GAGAGGG(-GAACAG-)CCCAGACCGCCGAUUAAG-GU|CCCU- C.trach.02 1700 AAUUU-UAUG-C-UAA-GUG------GGUAAGGAAGUG-AUGAUUCGAA- C.trach.02 1750 GACAGUUGGAAUGUUGGC(UUAGAGGCA)GCAAU-CAU|U(UAA)A|GAG C.trach.02 1800 UGC(GUAACA)GC|UCACCAAU-----CGAGA-AUC-AU--UGC|GCCGA C.trach.02 1850 UAAU-AAA--CGGGACU-AAGCAUA-A|A|ACCGACAUC|GCGG|gugug C.trach.02 1900 uc-----(gauaa------------------------------------- C.trach.02 1950 -------------------------------------------------- C.trach.02 2000 -------------------------------------------------- C.trach.02 2050 -------------------------------------------------- C.trach.02 2100 -------------------------------------------------- C.trach.02 2150 -----------------------------------)------gacacgc- C.trach.02 2200 GG-UAGGAGAG|-----CGUA-GUA-UUC--------------------- C.trach.02 2250 -------------------------------------------------- C.trach.02 2300 --------------------------------A-GCAG-AGAAGGUG-U- C.trach.02 2350 A-CC(-GGAA-)GGA--GCGCUGG|AGCGGA-UACUAGUGAAGAUCCAUG C.trach.02 2400 GC|AUA-AGUA--ACGAUAAAGGGAG(UGAAAAU)CUCCCU|CGCC-GUA C.trach.02 2450 AGCCCAAGGUUUCCAG-GGUCAAG-(CUCGU)CU|U-CCCUGGGUUAGU| C.trach.02 2500 CGG|C-CCCUAAGUUGAGGCG(UAAC)-U-GCGU-AGACGAUGGAGCAGC C.trach.02 2550 AGG-(UUAAAUAUU)C-CUGC|AC|ca-c-cu-aaa-acu---------- C.trach.02 2600 -------------------------------------------------- C.trach.02 2650 -------------------------------------------------- C.trach.02 2700 ---auagcgaa------ggaa--uga-cggaguaaguua--agc-ac|gc C.trach.02 2750 g-gac(ga--uugg-a-aga--)gu-ccgu-|aga--------------- C.trach.02 2800 ---gcga-ugagaa--------cgguu-aguagg(ca-aa-u-)cc|g-- C.trach.02 2850 cuaacauaa-----------gauc-aggucgcg-auca|agg-|------ C.trach.02 2900 -----ggaauc(-uucg--)ggggaa----------ccgauggugug--g C.trach.02 2950 agcg-agg-|cuuucaagaaauaauuuc-ua-gcu------------g-u C.trach.02 3000 -ugaug--gug|a|CCGUACCA-AAACC(GACACA)GG|UGG-GCGAGA- C.trach.02 3050 U-(GAAUA)UUCUAAGGCGC||GCGAGAUAACUUUCGUU----------- C.trach.02 3100 ----AAGGAACUCGGCAAAUUAUCCCCGUAAC(-UUCG)GAAUAAGGGGA C.trach.02 3150 |GCCUU--uu-aggguga---------cuau(ggaacg)auag-g----- C.trach.02 3200 --a-gcccc-gg-GGGG-C|C(GCA)GAGAAAUGGCC-CAGG|CGACU-- C.trach.02 3250 ---GU(UUAGCAAAA)ACACAGCACUAUG|CAAACCU(cuaa------)G C.trach.02 3300 GGGAAGU-AUAUGGUGUGA-CGCCUGCCCAAU|GCCA-AAA-GGUUAAAG C.trach.02 3350 GGAUAUGUCAGCU-------(G-CAA)----------AGCGA-AGCAUUG C.trach.02 3400 AACCUAAGCC|CUGGUGAAU|-GGC|CGCCGU(AACUAUA)ACGGUG|C( C.trach.02 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA C.trach.02 3500 AUGGUGUAACGA-UCUGGGCACUGUCUCAACGAAAGACUCG|GUGAAAUU C.trach.02 3550 |GUAGUAG-CAG(UGAAGAUG)CUGUUUACCCGCGAA-AGGACGAAAAGA C.trach.02 3600 CCCCGUGA|ACCU-UUACUGU|ACUUUGGUAUU|GAUUUUUGGUUUGUUA C.trach.02 3650 UGUGUAGGAUAGCCAGGAGACUAAGAAC--ACUCUUC(UUCA)GGAGAGU C.trach.02 3700 GGGAGUCAAC-G-UUGAAAUACUGGU|CUUA-ACAAGCUGGGA-AUCUAA C.trach.02 3750 -cauuau----ucca(-uga-auc)-uggaagaug-GACAUUGCCAGACG C.trach.02 3800 GG-CAGUUUUACUG(GGG)CGGUA|UCCUCC(UAA-AAAGUAAC)GGAGG C.trach.02 3850 A|G|C|CCAAAGCUUAUU|UCAUCGUGG(UUGGCAA)UCACGAGUA-GA| C.trach.02 3900 GC(G|UAAAG)GUAUAAGAUAGGUUGACUGCAAGAC(CAACAA)GUCGAG C.trach.02 3950 CAGAGAC(GAAA)GU-CGGG|CUUAGUGAUCCGGCGGUGGAA(AGUGGA) C.trach.02 4000 AUC|GCCGUCGCUUAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC C.trach.02 4050 UGA--UCGCCACCAAGA(G-UUC-AUA)UCGACGUGG-CGGU-UUGGCAC C.trach.02 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGA---A)-GGU C.trach.02 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGCUGG C.trach.02 4200 GUUCA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CUCUAU-CC|UUCGUG C.trach.02 4250 G-G|CG-CAGGAUACUU|GA-|GAGGAGC-UGU--------------UCC C.trach.02 4300 (UAGUAC(GAGA)GGACC)GGAAUGG|ACGAACCAAUGGUGUGUCGGU|U C.trach.02 4350 GUUUU(GC-CA-)AGGGCA-UAGCCGAGUAGCU-ACGUUCGGAAAGGAUA C.trach.02 4400 AGCAUU(GAAAGCAUCUA)AAUGCCAAGCCUCCCUC|AAGAUAAGGUAUC C.trach.02 4450 C|CA|------(------)--------AU-GAGA|-CU|CCAUG-(UAGA C.trach.02 4500 CU-A)CGUGG-UUGAUAG|GUUGG|AGGUG-UAAGCACA--(GUAA-)-- C.trach.02 4550 UGUGU|UC-AGCUA|A|CCAAUACUAAUA-AGUCCAAAG|ACUUGG-UCU C.trach.02 4600 U-------|uuuaugauuggaagagccgaaaggcaaagacaauaagaaaa C.trach.02 4650 agaguagagagugcaaguacguagaagacaagcuuuuaagcgucuauuag C.trach.02 4700 uauacgugaga-aacgaugccaggauuagcuuggugauaauagaga---- C.trach.02 4750 ---|||||| C.trach.03 0 -------------------------------------------------- C.trach.03 50 ------------------------aaau|-----UACAGACCAAGUUGA- C.trach.03 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.03 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.03 200 AUA-)AGCAACG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.03 250 gag-(--------------------------------------------- C.trach.03 300 -------------------------------------------------- C.trach.03 350 -------------------------------------------------- C.trach.03 400 -------------------------------------------------- C.trach.03 450 ---uaaua)-gucuacc-AUUG-UAUACU(GA-ACACA--UA)GGU-AUA C.trach.03 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.03 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCU-CUGUGUAGC(GGCGA)G C.trach.03 600 CGA-AAG-GGGA-AGA-GCCUAAAccgagc-u-------------(gaag C.trach.03 650 a)-------------agcgagggguuguaggguugagga----------- C.trach.03 700 ------------------------------aaaaggaucaggacuccu-a C.trach.03 750 guuGAAcacau-c(u-ggaaa)g-guggau|g(aua)caGGG(UGAUAGU C.trach.03 800 )CCCGU-Agac-gaaaggagagaaagacu--------------------- C.trach.03 850 -gacc-ucaauaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.03 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.03 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.03 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAA-UAGCU C.trach.03 1050 UACAA-G-CGGUCGGAGACC-uau----ggccc-----(----guaa--) C.trach.03 1100 --------ggguu-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.03 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uguaca)UUC C.trach.03 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.trach.03 1250 --------------------------u-uaG-UCGUUUGGUUUA-GACAC C.trach.03 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.03 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.03 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)GCCAAUCAAACUUGGAGAUAUC C.trach.03 1450 UUGUUCUCUCCGAAAUAACU(-AUAG)GGUUAGC|-CUCGGAUa---au| C.trach.03 1500 aagc|UUUUGG|GGGUAG|AGC-ACUGA-AUUCUAGC-GG|-GGGCC(ua C.trach.03 1550 cc-)GGCUUACCAACGGAAA-UCAAACUCCGAA-UA-|CCA-G-A-A--- C.trach.03 1600 gc-----ga|GUC-CGGGAGAUAGAC--AGC-GGGG(GCUAAG)CUUCGU C.trach.03 1650 -UGUC-GAGAGGG(-GAGCAG-)CCCAGACCGCCGAUUAAG-GU|CCCU- C.trach.03 1700 AAUUU-UAUG-C-UAA-GUG------AGUAAGGAAGUG-AUGAUUCAAA- C.trach.03 1750 GACAGUUGGAAUGUUGGC(UUAGAGGCA)GCAAU-CAU|U(UAA)A|GAG C.trach.03 1800 UGC(GUAACA)GC|UCACCAAU-----CGAGA-AUC-AU--UGC|GCCGA C.trach.03 1850 UAAU-AAA--CGGGGCU-AAGCAUA-A|A|ACCGACAUC|GCGG|gugug C.trach.03 1900 uc-----(g-uaa------------------------------------- C.trach.03 1950 -------------------------------------------------- C.trach.03 2000 -------------------------------------------------- C.trach.03 2050 -------------------------------------------------- C.trach.03 2100 -------------------------------------------------- C.trach.03 2150 -----------------------------------)------ggcacgc- C.trach.03 2200 GG-UAGGAGAG|-----CGUA-GUA-UUC--------------------- C.trach.03 2250 -------------------------------------------------- C.trach.03 2300 --------------------------------A-GCAG-AGAAGGUG-U- C.trach.03 2350 A-CC(-GAAA-)GGA--GCGCUGG|AGCGGA-UACUAGUGAAGAUCCAUG C.trach.03 2400 GC|AUA-AGUA--ACGAUAAAGGGAG(UGAAAAU)CUCCCU|CGCC-GUA C.trach.03 2450 AGCCCAAGGUUUCCAG-GGUCAAG-(CUCGU)CU|U-CCCUGGGUUAGU| C.trach.03 2500 CGG|C-CCCUAAGUUGAGGCG(UAAC)-U-GCGU-AGACGAUGGAGCAGC C.trach.03 2550 AGG-(UUAAAUAUU)C-CUGC|AC|ca-c-cu-aag-acu---------- C.trach.03 2600 -------------------------------------------------- C.trach.03 2650 -------------------------------------------------- C.trach.03 2700 ---auagcgaa------ggaa--uga-cggaguaaguua--agc-ac|gc C.trach.03 2750 g-gac(ga--uugg-a-agu--)gu-ccgu-|aga--------------- C.trach.03 2800 ---gcga-ugagaa--------cgguu-aguagg(ca-aa-u-)cc|g-- C.trach.03 2850 cuaacagaa-----------gauc-aggucgcg-auca|agg-|------ C.trach.03 2900 -----ggaauc(-uucg--)gaggaa----------ccgauggugug--u C.trach.03 2950 agcg-agg-|cuuucaagaaauaauuuc-ua-gcu------------g-u C.trach.03 3000 -ugaug--gug|a|CCGUACCA-AAACC(GACACA)GG|UGG-GCGAGA- C.trach.03 3050 U-(GAGUA)UUCUAAGGCGC||GCGAGAUAACUUUCGUU----------- C.trach.03 3100 ----AAGGAACUCGGCAAAUUAUCCCCGUAAC(-UUCG)GGAUAAGGGGA C.trach.03 3150 |GCCUU--uu-aggguga---------cuau(ggaacg)auag-g----- C.trach.03 3200 --a-gcccc-gg-GGGG-C|C(GCA)GAGAAAUGGCC-CAGG|CGACU-- C.trach.03 3250 ---GU(UUAGCAAAA)ACACAGCACUAUG|CAAACCU(cgaa------)G C.trach.03 3300 GGGAAGU-AUAUGGUGUGA-CGCCUGCCCAAU|GCCA-AAA-GGUUAAAG C.trach.03 3350 GGAUAUGUCAGCU-------(G-CAA)----------AGCGA-AGCAUUG C.trach.03 3400 AACCUAAGCC|CUGGUGAAU|-GGC|CGCC~~(~~~~~~~)~~~~~~|~( C.trach.03 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.03 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.03 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.03 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.03 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.03 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.03 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.03 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.03 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.03 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.03 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.03 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.03 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.03 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.03 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.03 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.03 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.03 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.03 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.03 4750 ~~~|||||| C.trach.04 0 -------------------------------------------------- C.trach.04 50 ------------------------aaau|-----UACAGACCAAGUUAA- C.trach.04 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.04 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.04 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.04 250 gag-(--------------------------------------------- C.trach.04 300 -------------------------------------------------- C.trach.04 350 -------------------------------------------------- C.trach.04 400 -------------------------------------------------- C.trach.04 450 ---uaaua)-gacuacc-AUUG-CAUGCU(GA-AUACA--UA)GGU-AUG C.trach.04 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.04 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.04 600 CGA-AAG-GGGA-AUA-GCCUAAAccgagc-u-------------(gaua C.trach.04 650 a)-------------ggcucgggguuguaggauugagga----------- C.trach.04 700 ------------------------------uaaaggaucaggacuccu-a C.trach.04 750 guuGAAcacau-c(u-ggaaa)g-auggau|g(aua)caGGG(UGAUAGU C.trach.04 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.04 850 -gacc-ucaacaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.04 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.04 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.04 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.04 1050 UACAA-G-CGGUCGGAGACC-aau----ggccc-----(----guaa--) C.trach.04 1100 --------ggguc-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.04 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uauaca)UUC C.trach.04 1200 C-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGA-------- C.trach.04 1250 --------------------------a-gaG-UCGUUUGGUUUA-GACAC C.trach.04 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.04 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.04 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.04 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.04 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.04 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.04 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.04 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.04 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.04 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.04 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.04 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.04 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.04 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.04 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.04 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.04 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.04 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.04 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.04 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.04 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.04 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.04 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.04 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.04 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.04 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.04 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.04 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.04 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.04 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.04 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.04 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.04 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.04 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.04 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.04 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.04 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.04 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.04 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.04 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.04 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.04 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.04 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.04 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.04 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.04 4750 ~~~|||||| C.trach.05 0 -------------------------------------------------- C.trach.05 50 ------------------------aaau|-----UACAGACCAAGUUGA- C.trach.05 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.05 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.05 200 AUA-)AGCAACG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.05 250 gag-(--------------------------------------------- C.trach.05 300 -------------------------------------------------- C.trach.05 350 -------------------------------------------------- C.trach.05 400 -------------------------------------------------- C.trach.05 450 ---uaaua)-gucuacc-AUUG-UAUACU(GA-ACACA--UA)GGU-AUA C.trach.05 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.05 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.05 600 CGA-AAG-GGGA-AGA-GCCUAAAccgagc-c-------------(gaag C.trach.05 650 a)-------------agcgagggguuguaggguugagga----------- C.trach.05 700 ------------------------------aaaaggaucaggacuccu-a C.trach.05 750 guuGAAcacau-c(u-ggaaa)g-guggau|g(aua)caGGG(UGAUAGU C.trach.05 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.05 850 -gacc-ucaauaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.05 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.05 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.05 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.05 1050 UACAA-G-CGGUCGGAGACC-uac----ggccc-----(----gcaa--) C.trach.05 1100 --------ggguu-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.05 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uguaca)UUC C.trach.05 1200 U-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.trach.05 1250 --------------------------a-uaG-UCGUUUGGUUUA-GACAC C.trach.05 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.05 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.05 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.05 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.05 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.05 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.05 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.05 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.05 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.05 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.05 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.05 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.05 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.05 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.05 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.05 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.05 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.05 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.05 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.05 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.05 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.05 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.05 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.05 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.05 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.05 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.05 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.05 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.05 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.05 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.05 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.05 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.05 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.05 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.05 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.05 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.05 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.05 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.05 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.05 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.05 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.05 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.05 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.05 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.05 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.05 4750 ~~~|||||| C.trach.06 0 -------------------------------------------------- C.trach.06 50 ------------------------aaau|-----UACAGACCAAGUUGA- C.trach.06 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.06 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.06 200 AUA-)AGCAACG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.06 250 gag-(--------------------------------------------- C.trach.06 300 -------------------------------------------------- C.trach.06 350 -------------------------------------------------- C.trach.06 400 -------------------------------------------------- C.trach.06 450 ---uaaua)-gucuacc-AUUG-UAUACU(GA-ACACA--UA)GGU-AUA C.trach.06 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.06 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.06 600 CGA-AAG-GGGA-AGA-GCCUAAAccgagc-u-------------(gaag C.trach.06 650 a)-------------agcgagggguuguaggguugagga----------- C.trach.06 700 ------------------------------aaaaggaucaggacuccu-a C.trach.06 750 guuGAAcacau-c(u-ggaaa)g-guggau|g(aua)caGGG(UGAUAGU C.trach.06 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.06 850 -gacc-ucaauaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.06 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.06 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.06 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAA-UAGCU C.trach.06 1050 UACAA-G-CGGUCGGAGACC-uau----ggccc-----(----guaa--) C.trach.06 1100 --------ggguu-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.06 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uguaca)UUC C.trach.06 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.trach.06 1250 --------------------------u-uaG-UCGUUUGGUUUA-GACAC C.trach.06 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.06 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.06 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.06 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.06 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.06 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.06 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.06 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.06 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.06 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.06 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.06 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.06 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.06 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.06 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.06 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.06 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.06 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.06 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.06 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.06 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.06 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.06 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.06 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.06 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.06 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.06 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.06 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.06 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.06 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.06 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.06 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.06 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.06 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.06 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.06 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.06 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.06 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.06 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.06 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.06 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.06 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.06 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.06 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.06 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.06 4750 ~~~|||||| C.trach.07 0 -------------------------------------------------- C.trach.07 50 ------------------------aaau|-----UACAGACCAAGUUGA- C.trach.07 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.07 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.07 200 AUA-)AGCAACG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.07 250 gag-(--------------------------------------------- C.trach.07 300 -------------------------------------------------- C.trach.07 350 -------------------------------------------------- C.trach.07 400 -------------------------------------------------- C.trach.07 450 ---uaaua)-gucuacc-AUUG-UAUACU(GA-ACACA--UA)GGU-AUA C.trach.07 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.07 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.07 600 CGA-AAG-GGGA-AGA-GCCUAAAccgagc-u-------------(gaag C.trach.07 650 a)-------------agcgagggguuguaggguugagga----------- C.trach.07 700 ------------------------------aaaaggaucaggacuccu-a C.trach.07 750 guuGAAcacau-c(u-ggaaa)g-guggau|g(aua)caGGG(UGAUAGU C.trach.07 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.07 850 -gacc-ucaauaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.07 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.07 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.07 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAA-UAGCU C.trach.07 1050 UACAA-G-CGGUCGGAGACC-uau----ggccc-----(----guaa--) C.trach.07 1100 --------ggguu-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.07 1150 -GCCAGG-AGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uguaca)UUC C.trach.07 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.trach.07 1250 --------------------------u-uaG-UCGUUUGGUUUA-GACAC C.trach.07 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.07 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.07 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.07 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.07 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.07 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.07 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.07 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.07 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.07 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.07 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.07 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.07 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.07 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.07 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.07 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.07 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.07 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.07 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.07 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.07 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.07 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.07 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.07 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.07 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.07 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.07 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.07 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.07 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.07 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.07 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.07 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.07 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.07 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.07 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.07 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.07 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.07 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.07 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.07 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.07 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.07 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.07 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.07 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.07 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.07 4750 ~~~|||||| C.trach.08 0 -------------------------------------------------- C.trach.08 50 ------------------------aaaa|-----UACAGACCAAGUUGA- C.trach.08 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.08 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.08 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GGAA)CCC|ggua C.trach.08 250 gag-(--------------------------------------------- C.trach.08 300 -------------------------------------------------- C.trach.08 350 -------------------------------------------------- C.trach.08 400 -------------------------------------------------- C.trach.08 450 ---uaaua)-gacuacc-AUUG-UAUGCU(GA-ACACA--UA)GGC-AUA C.trach.08 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.08 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.08 600 CGA-AAG-GGGA-AGA-GCCUAAAccgagc-u-------------(gaag C.trach.08 650 a)-------------agcgagggguuguaggguugaggg----------- C.trach.08 700 ------------------------------agaaggaucaggacuccu-a C.trach.08 750 guuGAAcacau-c(u-ggaaa)g-guggau|g(aua)caGGG(UGAUAGU C.trach.08 800 )CCCGU-Agac-gaaaggagagauagacc--------------------- C.trach.08 850 -gacc-ucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.trach.08 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.08 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.08 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.08 1050 UACAA-G-CGGUCGGAGACC-uau----ggccc-----(----gcaa--) C.trach.08 1100 --------ggguu-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.08 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uguaca)UUC C.trach.08 1200 U-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.trach.08 1250 --------------------------a-uaG-UCGUUUGGUUUA-GACAC C.trach.08 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.08 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.08 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.08 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.08 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.08 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.08 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.08 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.08 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.08 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.08 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.08 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.08 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.08 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.08 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.08 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.08 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.08 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.08 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.08 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.08 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.08 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.08 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.08 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.08 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.08 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.08 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.08 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.08 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.08 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.08 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.08 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.08 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.08 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.08 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.08 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.08 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.08 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.08 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.08 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.08 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.08 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.08 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.08 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.08 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.08 4750 ~~~|||||| C.trach.09 0 -------------------------------------------------- C.trach.09 50 ------------------------aauu|-----UACAGACCAAGUUGA- C.trach.09 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.trach.09 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-A C.trach.09 200 AUA-)AGCAAAG-ACC-CGGAGGUG|UCCGAAUGGG(GAAA)CCC|ggua C.trach.09 250 gag-(--------------------------------------------- C.trach.09 300 -------------------------------------------------- C.trach.09 350 -------------------------------------------------- C.trach.09 400 -------------------------------------------------- C.trach.09 450 ---uaaua)-gucuacc-AUUG-UAUACU(GA-AUACA--UA)GGU-AUG C.trach.09 500 -C-A--AAG-CAACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.09 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.09 600 CGA-AAG-GGGA-AGA-GCCUAAAccgaac-u-------------(uaua C.trach.09 650 -)--------------guucgggguuguaggauugggga----------- C.trach.09 700 ------------------------------uaaaggaucaagauuccu-a C.trach.09 750 guuGAAcacau-c(u-ggaaa)g-guggau|g(aaa)caGGG(UGAUAGU C.trach.09 800 )CCCGU-Agac-gaaaggagaucaagacc--------------------- C.trach.09 850 -gacc-ucaacaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.trach.09 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.09 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.09 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.09 1050 UACAA-G-CGGUCGAAGACC-uau----guccc-----(---uuuaacg) C.trach.09 1100 --------ggguc-ga-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.09 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uguaca)UUC C.trach.09 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.trach.09 1250 --------------------------u-uaG-UCGUUUGGUUUA-GACAC C.trach.09 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.09 1350 AC-UAUGUGGAGGACCGAACC-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.09 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.09 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.09 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.09 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.09 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.09 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.09 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.09 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.09 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.09 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.09 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.09 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.09 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.09 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.09 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.09 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.09 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.09 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.09 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.09 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.09 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.09 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.09 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.09 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.09 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.09 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.09 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.09 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.09 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.09 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.09 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.09 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.09 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.09 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.09 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.09 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.09 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.09 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.09 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.09 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.09 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.09 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.09 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.09 4750 ~~~|||||| C.trach.10 0 -------------------------------------------------- C.trach.10 50 ------------------------aauu|-----UACAGACCAAGUUGA- C.trach.10 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.trach.10 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-A C.trach.10 200 AUA-)AGCAAAG-ACC-CGGAGGUG|UCCGAAUGGG(GAAA)CCC|ggua C.trach.10 250 gag-(--------------------------------------------- C.trach.10 300 -------------------------------------------------- C.trach.10 350 -------------------------------------------------- C.trach.10 400 -------------------------------------------------- C.trach.10 450 ---uaaua)-gucuacc-AUUG-UAUACU(GA-AUACA--UA)GGU-AUG C.trach.10 500 -C-A--AAG-CAACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.10 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.10 600 CGA-AAG-GGGA-AGA-GCCUAAAccgaac-u-------------(uaua C.trach.10 650 -)--------------guucgggguuguaggauugggga----------- C.trach.10 700 ------------------------------uaaaggaucaagauuccu-a C.trach.10 750 guuGAAcacau-c(u-ggaaa)g-guggau|g(aaa)caGGG(UGAUAGU C.trach.10 800 )CCCGU-Agac-gaaaggagaucaagacc--------------------- C.trach.10 850 -gacc-ucaacaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.trach.10 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.10 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.10 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.10 1050 UACAA-G-CGGUCGAAGACC-uau----guccc-----(---uuuaacg) C.trach.10 1100 --------ggguc-ga-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.10 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uguaca)UUC C.trach.10 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.trach.10 1250 --------------------------u-uaG-UCGUUUGGUUUA-GACAC C.trach.10 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.10 1350 AC-UAUGUGGAGGACCGAACC-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.10 1400 AUGAA-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.10 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.10 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.10 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.10 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.10 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.10 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.10 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.10 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.10 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.10 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.10 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.10 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.10 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.10 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.10 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.10 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.10 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.10 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.10 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.10 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.10 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.10 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.10 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.10 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.10 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.10 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.10 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.10 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.10 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.10 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.10 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.10 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.10 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.10 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.10 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.10 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.10 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.10 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.10 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.10 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.10 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.10 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.10 4750 ~~~|||||| C.trach.11 0 -------------------------------------------------- C.trach.11 50 ------------------------aaau|-----UACAGACCAAGUUAA- C.trach.11 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.11 150 GA|CGCA(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.11 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.11 250 gag-(--------------------------------------------- C.trach.11 300 -------------------------------------------------- C.trach.11 350 -------------------------------------------------- C.trach.11 400 -------------------------------------------------- C.trach.11 450 ---uaaua)-gacuacc-AUUG-CAUGCU(GA-AUACA--UA)GGU-AUG C.trach.11 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.11 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.11 600 CGA-AAG-GGGA-AUA-GCCUAAAccgagc-u-------------(gaua C.trach.11 650 a)-------------ggcucgggguuguaggauugagga----------- C.trach.11 700 ------------------------------uaaaggaucaggacuccu-a C.trach.11 750 guuGAAcacau-c(u-ggaaa)g-auggau|g(aua)caGGG(UGAUAGU C.trach.11 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.11 850 -gacc-ucaacaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.11 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.11 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.11 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.11 1050 UACAA-G-CGGUCGGAGACC-aau----ggccc-----(----guaa--) C.trach.11 1100 --------ggguc-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.11 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uauaca)UUC C.trach.11 1200 C-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGA-------- C.trach.11 1250 --------------------------a-gaG-UCGUUUGGUUUA-GACAC C.trach.11 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.11 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.11 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.11 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.11 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.11 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.11 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.11 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.11 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.11 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.11 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.11 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.11 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.11 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.11 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.11 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.11 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.11 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.11 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.11 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.11 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.11 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.11 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.11 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.11 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.11 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.11 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.11 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.11 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.11 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.11 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.11 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.11 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.11 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.11 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.11 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.11 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.11 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.11 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.11 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.11 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.11 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.11 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.11 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.11 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.11 4750 ~~~|||||| C.trach.12 0 -------------------------------------------------- C.trach.12 50 ------------------------aaau|-----UACAGACCAAGUUAA- C.trach.12 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.12 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.12 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.12 250 gag-(--------------------------------------------- C.trach.12 300 -------------------------------------------------- C.trach.12 350 -------------------------------------------------- C.trach.12 400 -------------------------------------------------- C.trach.12 450 ---uaaua)-gacuacc-AUUG-CAUGCU(GA-AUACA--UA)GGU-AUG C.trach.12 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.12 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.12 600 CGA-AAG-GGGA-AUA-GCCUAAAccgagc-u-------------(gaua C.trach.12 650 a)-------------ggcucgggguuguaggauugagga----------- C.trach.12 700 ------------------------------uaaaggaucaggacuccu-a C.trach.12 750 guuGAAcacau-c(u-ggaaa)g-auggau|g(aua)caGGG(UGAUAGU C.trach.12 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.12 850 -gacc-ucaacaccu---GAGUAGGACUAGA(CACGUG-AAA)UCUAGUC C.trach.12 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.12 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.12 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.12 1050 UACAA-G-CGGUCGGAGACC-aau----ggccc-----(----guaa--) C.trach.12 1100 --------ggguc-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.12 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uauaca)UUC C.trach.12 1200 C-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGA-------- C.trach.12 1250 --------------------------a-gaG-UCGUUUGGUUUA-GACAC C.trach.12 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.12 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.12 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.12 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.12 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.12 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.12 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.12 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.12 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.12 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.12 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.12 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.12 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.12 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.12 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.12 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.12 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.12 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.12 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.12 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.12 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.12 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.12 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.12 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.12 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.12 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.12 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.12 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.12 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.12 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.12 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.12 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.12 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.12 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.12 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.12 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.12 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.12 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.12 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.12 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.12 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.12 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.12 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.12 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.12 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.12 4750 ~~~|||||| C.trach.13 0 -------------------------------------------------- C.trach.13 50 ------------------------aaau|-----UACAGACCAAGUUAA- C.trach.13 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.13 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.13 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.13 250 gag-(--------------------------------------------- C.trach.13 300 -------------------------------------------------- C.trach.13 350 -------------------------------------------------- C.trach.13 400 -------------------------------------------------- C.trach.13 450 ---uaaua)-gacuacc-AUUG-CAUGCU(GA-AUACA--UA)GGU-AUG C.trach.13 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.13 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.13 600 CGA-AAG-GGGA-AUA-GCCUAAAccgagc-u-------------(gaua C.trach.13 650 a)-------------ggcucgggguuguaggauugagga----------- C.trach.13 700 ------------------------------uaaaggaucaggacuccu-a C.trach.13 750 guuGAAcacau-c(u-ggaaa)g-auggau|g(aua)caGGG(UGAUAGU C.trach.13 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.13 850 -gacc-ucaacaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.13 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.13 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.13 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.13 1050 UACAA-G-CGGUCGGAGACC-aau----ggccc-----(----guaa--) C.trach.13 1100 --------ggguc-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.13 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uauaca)UUC C.trach.13 1200 C-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGA-------- C.trach.13 1250 --------------------------a-gaG-UCGUUUGGUUUA-GACAC C.trach.13 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.13 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.13 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.13 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.13 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.13 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.13 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.13 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.13 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.13 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.13 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.13 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.13 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.13 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.13 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.13 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.13 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.13 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.13 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.13 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.13 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.13 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.13 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.13 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.13 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.13 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.13 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.13 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.13 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.13 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.13 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.13 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.13 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.13 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.13 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.13 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.13 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.13 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.13 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.13 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.13 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.13 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.13 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.13 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.13 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.13 4750 ~~~|||||| C.trach.14 0 -------------------------------------------------- C.trach.14 50 ------------------------aaau|-----UACAGACCAAGUUAA- C.trach.14 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAAGAAG C.trach.14 150 GA|CGCG(AAUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GU-G C.trach.14 200 AUA-)AGCAAAG-ACC-CGGAGGUA|UCCGAAUGGG(GAAA)CCC|ggua C.trach.14 250 gag-(--------------------------------------------- C.trach.14 300 -------------------------------------------------- C.trach.14 350 -------------------------------------------------- C.trach.14 400 -------------------------------------------------- C.trach.14 450 ---uaaua)-gacuacc-AUUG-CAUGCU(GA-AUACA--UA)GGU-AUG C.trach.14 500 -C-A--AAG-CGACAC|CU-GCCGAACU|GA(AACA)UCUUAGUA-AGCA C.trach.14 550 GAGGAAAAGAAAUC(-gaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.trach.14 600 CGA-AAG-GGGA-AUA-GCCUAAAccgagc-u-------------(gaua C.trach.14 650 a)-------------gucucgggguuguaggauugggga----------- C.trach.14 700 ------------------------------uaaaggaucagaacuccu-a C.trach.14 750 guuGAAcacau-c(u-ggaaa)g-auggau|g(aua)caGGG(UGAUAGU C.trach.14 800 )CCCGU-Agac-gaaaggagagaaagacc--------------------- C.trach.14 850 -gacc-ucaacaccu---GAGUAGGACUAGA(CACGUG-AAA)CCUAGUC C.trach.14 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGUC C.trach.14 950 AAUGACCGAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGCGAAAA-G C.trach.14 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.trach.14 1050 UACAA-G-CGGUCGGAGACC-aau----ggccc-----(----guaa--) C.trach.14 1100 --------ggguc-aa-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.trach.14 1150 -GCCAGGGAGUUAA-GCUA-AACGGC-GAGGUUAAGGGA(uauaca)UUC C.trach.14 1200 C-GGAGCCGGAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGA-------- C.trach.14 1250 --------------------------a-gaG-UCGUUUGGUUUA-GACAC C.trach.14 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAA) C.trach.14 1350 AC-UAUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.trach.14 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.trach.14 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.trach.14 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.trach.14 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.14 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.trach.14 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.trach.14 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.trach.14 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.trach.14 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.trach.14 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.trach.14 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.trach.14 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.trach.14 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.trach.14 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.trach.14 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.trach.14 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.trach.14 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.trach.14 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.trach.14 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.trach.14 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.trach.14 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.trach.14 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.trach.14 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.trach.14 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.trach.14 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.trach.14 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.trach.14 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.trach.14 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.trach.14 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.trach.14 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.trach.14 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.trach.14 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.trach.14 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.trach.14 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.trach.14 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.trach.14 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.trach.14 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.trach.14 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.trach.14 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.trach.14 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.trach.14 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.trach.14 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.trach.14 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.trach.14 4750 ~~~|||||| Chlamyd.sp 0 ------------------------------------------------ac Chlamyd.sp 50 ucuuauauuaaagcuuguuccaauauau|-----AUUUGGUCAAGCUAU- Chlamyd.sp 100 --UAAGGGCUGCUGGUGGAUG|CCUAGG|CAUCAAU|AG|GC-GAUGAAG Chlamyd.sp 150 GA|CGCG(UUUA-CC-)U|-GCG-AAAAGCUCCGGC|-GAGCU(G-GA-A Chlamyd.sp 200 UAA-)AGCUGCG-ACC-CGGAGAUA|UCCGAAUGGG(GCAA)CCC|aaug Chlamyd.sp 250 gga-(--------------------------------------------- Chlamyd.sp 300 -------------------------------------------------- Chlamyd.sp 350 -------------------------------------------------- Chlamyd.sp 400 -------------------------------------------------- Chlamyd.sp 450 --cuaauc)-ucccauu-AUCU-UUAGCU(GA-AUACA--UA)GGC-UAU Chlamyd.sp 500 -A-G--AAG-CGAUAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA Chlamyd.sp 550 GAGGAAAAGAAAUC(-AAUU--)GAGAU|UCC-CUAAGUAGC(GGCGA)G Chlamyd.sp 600 CGA-AAC-GGGA-UGA-GCCCAAAccaaag-uc------------(-uuu Chlamyd.sp 650 -)------------gacuuugggguuguaggaccagcca----------- Chlamyd.sp 700 -------------------------------aaagcuuuggaaauucu-a Chlamyd.sp 750 gucGAAuacuu-c(u-ggaaa)g-uugagc|g(aca)caGGG(UGAUAGC Chlamyd.sp 800 )CCCGU-Agac-gaaagaauga-ccaaaca-------------------- Chlamyd.sp 850 --agg-caggcaccu---GAGUAGGGCCGGA(CACGUG-AAA)CCCGGUC Chlamyd.sp 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAAUU Chlamyd.sp 950 GAUGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Chlamyd.sp 1000 AACCCC(gauga-)GGGGA--GUGAAA-UAGAACCUGAAACCAG-CAGCU Chlamyd.sp 1050 UACAA-A-CGGUCGAAGGCC-uau---guccuu-----(-----uuu--) Chlamyd.sp 1100 --------aaggaaau-GGCUAACGGCGUGCCU(UUU-GCAU|G)AUGA| Chlamyd.sp 1150 -GCCAGCGAGUUACUAUUA-AAUGGC-AAGGUUAAGGGA(ca-acg)UUC Chlamyd.sp 1200 U-GGAGCCGAAGC(GAAA-)GCGAGUGU(UAA-AA)GCGCGU-------- Chlamyd.sp 1250 --------------------------a-uAG-UCAUUUGAUGUA-GACAC Chlamyd.sp 1300 GAAAC-CGA-GUGA-UCUAUCCAUGAC|CAGGUUGAAGCAAGGG(UAAC) Chlamyd.sp 1350 AC-CUUGUGGAGGACCGAACU-AGUUGCC(-GUUGAAAA)GGCUU|UGG- Chlamyd.sp 1400 AUGAG-UUGUGGAUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAGAUAUC Chlamyd.sp 1450 UUGUUCUCUUCGAAAUAACU(-UUCG)GGUUAGC|-CUCGAACau--aa| Chlamyd.sp 1500 uuau|CUACAG|GGGUAG|AGC-ACUGA-AUUCACGC-GG|-GGGCC(ua Chlamyd.sp 1550 cc-)GGCCUACCAAAGGAAA-UCAAACUCCGAA-UA-|CUG-U-A-G--- Chlamyd.sp 1600 au-----uc|GUU-CGGGAGAUAGAC--AGU-GGGG(GAUAAG)CUUCAU Chlamyd.sp 1650 -UGUC-AAAAGGG(-GAACAG-)CCCAGAUCGCCGAUUAAG-GC|CCCA- Chlamyd.sp 1700 AAUUC-UAUG-C-UAA-GUG------AGUAAGGAAGUG-GAGUUUCUAA- Chlamyd.sp 1750 AACAGUUGGAAUGUUGGC(UUAGAGGCA)GCCAU-CAU|U(UAA)A|GAG Chlamyd.sp 1800 UGC(GUAACA)GC|UCACCAAU-----CGAGA-AAC-UC--UGC|GCCGA Chlamyd.sp 1850 UAAU-AUC--CGGGACU-AAGCAUA-G|A|GCCGAAAUC|GCGG|guuua Chlamyd.sp 1900 gcuu---(g-uaa------------------------------------- Chlamyd.sp 1950 -------------------------------------------------- Chlamyd.sp 2000 -------------------------------------------------- Chlamyd.sp 2050 -------------------------------------------------- Chlamyd.sp 2100 -------------------------------------------------- Chlamyd.sp 2150 -----------------------------------)----aagcuaagc- Chlamyd.sp 2200 GG-UAGGAGAG|-----CGUA-GUA-UG---------------------- Chlamyd.sp 2250 -------------------------------------------------- Chlamyd.sp 2300 --------------------------------U-GCAG-CGAAGAUG-U- Chlamyd.sp 2350 A-CC(-GUAA-)GGA--GCGUUGG|AGCGCA-UACUAGUGAUAAUGCAUG Chlamyd.sp 2400 GC|AUA-AGUA--ACGAUAAAGGAGG(UGAAAAU)CCUCCU|CGCC-GAA Chlamyd.sp 2450 AAUCCAAGGUUUCCAG-GGUAAAG-(CUCGU)CU|U-CCCUGGGUUAGC| Chlamyd.sp 2500 CGG|U-CCCUAAGCCGAGGCU(GAAA)-A-GCGU-AGGCGAUGG-CAAGC Chlamyd.sp 2550 AGG-(UUAAAUAUU)C-CUGC|GC|ca-c-cu-aaa-acu---------- Chlamyd.sp 2600 -------------------------------------------------- Chlamyd.sp 2650 -------------------------------------------------- Chlamyd.sp 2700 ---augaugau------gagu--uga-cgaaguacguua--agc-ac|gc Chlamyd.sp 2750 g-gac(ga--uugg-a-agu--)gu-ccgu-|-gga-------------- Chlamyd.sp 2800 ---caua-ugaggc--------cggcu-aguagg(ca-aa-u-)cc|g-- Chlamyd.sp 2850 cuagcauaa-----------agcc-agguaugg-acca|agg-|------ Chlamyd.sp 2900 -----ggagcc(-cucg--)ggugaa----------ccgauagugua--g Chlamyd.sp 2950 cgca-acg-|cuuccaagaaauagacuc-ua-auc------------g-u Chlamyd.sp 3000 -ugaug--gug|a|CCGUACCA-AAACC(GACACA)GG|UGG-AUGGGA- Chlamyd.sp 3050 A-(UAAUA)UUCUCAGGCGC||GCGAGAGAACUCUCGUU----------- Chlamyd.sp 3100 ----AAGGAACUCGGCAAAUUAUCCCCGUAAC(-UUCG)GGAGAAGGGGA Chlamyd.sp 3150 |GCCAC--gg-gguguga--------cauuc(-uucgc)gaaug------ Chlamyd.sp 3200 --aagcauc-aa-GUGG-C|C(GCA)GAGAAAUGGCC-CAGG|CGACU-- Chlamyd.sp 3250 ---GU(UUAACAAAA)ACACAGCACUAUG|CAAAGUC(gucu---aa-)G Chlamyd.sp 3300 ACGAAGU-AUAUGGUGUGA-UGCCUGCCCAAU|GCCA-AAA-GGUCAAAA Chlamyd.sp 3350 gGAGAAGUUAGUGC------(G-CAA)---------GUGCGA-AGCUUUG Chlamyd.sp 3400 AaUUUAAGCC|CUGGUGAAU|-GGC|GGCCGU(AACUAUA)ACGGUC|C( Chlamyd.sp 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Chlamyd.sp 3500 AUGGUAUAACGA-UCUGGGCACUGUCUCAACGAGAGACUCG|GUGAAAUU Chlamyd.sp 3550 |GUAGUAG-CAG(UGAAGAUG)CUGUUUACCCGCAAU-AAGACGGAAAGA Chlamyd.sp 3600 CCCCGUGA|ACCU-UUACUGU|ACUCUGAUAUU|GGCUUUUGACUUGUCA Chlamyd.sp 3650 UGUGUAGGAUAACCAGGAGACAUUGAAG--UCCCCUC(GUCA)GGGGGGA Chlamyd.sp 3700 UGGAGUCAAC-G-UUGAAAUACUGGU|CUUG-ACAAGCCGGAA-AUCUAA Chlamyd.sp 3750 -cgaaau----ucca(-uga-auc)-uggaauucg-GACAUUGUCAGACG Chlamyd.sp 3800 GG-CAGUUUUGCUG(GGG)CGGUA|UCCUCC(UAA-AAGGUAAC)GGAGG Chlamyd.sp 3850 A|G|U|CCAAAGCUUGCC|UCAUCGUGG(UUGGUAA)UCACGAGUC-GA| Chlamyd.sp 3900 GC(G|UAAAG)GUAUAAGGCAAGUUAACUGCGAGAC(CAACAA)GUCGAG Chlamyd.sp 3950 CAGAUAC(GAAA)GU-AGGG|CUUAGUGAUCCGGCGGUGGAA(AGUGGA) Chlamyd.sp 4000 AUC|GCCGUCGCUCAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC Chlamyd.sp 4050 UUA--UCGCCACCAAGA(G-UUC-AUA)UCGACGUGG-CGGU-UUGGCAC Chlamyd.sp 4100 CUCGAUGUC|GACU|C|AUCGC|AUCC|UGGGGCU(GGAGA---A)-GGU Chlamyd.sp 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGUUGG Chlamyd.sp 4200 GUUCA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GUUGUG Chlamyd.sp 4250 G-G|CG-UAGGAUACUU|GA-|GAGGAGC-UGC--------------UUC Chlamyd.sp 4300 (UAGUAC(GAGA)GGACC)GAAGUGG|ACGAACCAAUGGUGUUCCGGU|U Chlamyd.sp 4350 GUUCU(GC-CA-)AGAGCA-UCGCCGGGUAGCU-AUGUUCGGAAAGGAUA Chlamyd.sp 4400 AGCGUU(GAAAGCAUCUA)AACGCCAAGCCCCCCUC|AAGAUAAGGUAUC Chlamyd.sp 4450 C|CU|------(------)--------AU-GAGA|-CU|CCAUG-(UAGA Chlamyd.sp 4500 CC-A)CGUGG-UAGAUAG|GUUGG|GUGUG-UAAGCACA--(GUAA-)-- Chlamyd.sp 4550 UGUGU|UG-AGCUA|A|CCAAUACUAAUC-AGUCCAUUG|GCUUGA-CCA Chlamyd.sp 4600 C-------|cuuuuuuuaagaaugaagagaugaagaccauaaagucacuu Chlamyd.sp 4650 ggauagaaa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Chlamyd.sp 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Chlamyd.sp 4750 ~~~|||||| C.pecoru.1 0 -------------------------------------------------- C.pecoru.1 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.pecoru.1 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAA|AG|GC-GAUGAAG C.pecoru.1 150 GA|UGCG(UUUA-CC-)U|-GCA-UUAAUCUUCGGC|-GAGCU(G-GU-A C.pecoru.1 200 UAA-)AGCUAUG-ACC-CGGAGGUU|UCCGAAUGGG(AAAA)CCC|gaua C.pecoru.1 250 gau-(--------------------------------------------- C.pecoru.1 300 -------------------------------------------------- C.pecoru.1 350 -------------------------------------------------- C.pecoru.1 400 -------------------------------------------------- C.pecoru.1 450 ---uaaua)-gucuauc-AUUA-UACGCU(GA-AUCCA--UA)GGC-GUA C.pecoru.1 500 -U-A--AGG-CGAAAC|CU-ACUGAACU|GA(AACA)UCUUAGUA-AGUA C.pecoru.1 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pecoru.1 600 CGA-AAG-GGGA-ACA-GUCUAAAccauau-u-------------(-uuu C.pecoru.1 650 -)-------------aauaugggguuguagggucgauaa----------- C.pecoru.1 700 ------------------------------cgugagaucuuaaguuuu-a C.pecoru.1 750 guuGAAuauuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pecoru.1 800 )CCCGU-Aaac-gaaaaaacaa-aagacu--------------------- C.pecoru.1 850 --cuauucgauuccu---GAGUAGAACUAGA(CACGUG-AAA)CCUAGUU C.pecoru.1 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGACUAA----AUACUAAUC C.pecoru.1 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUAA)-AGGA-AAGGUGAAAA-G C.pecoru.1 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pecoru.1 1050 UAUAA-G-CGGUCGAAGACC-uau---aac-uc-----(----uucg--) C.pecoru.1 1100 --------ga-gugau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pecoru.1 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.pecoru.1 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pecoru.1 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.pecoru.1 1300 GAAAC-CAA-GUGA-UCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pecoru.1 1350 AC-UUUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.pecoru.1 1400 AUGAG-UUGUGAAUAGGG-U(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pecoru.1 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pecoru.1 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pecoru.1 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.1 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pecoru.1 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pecoru.1 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pecoru.1 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pecoru.1 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pecoru.1 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pecoru.1 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pecoru.1 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pecoru.1 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pecoru.1 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pecoru.1 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pecoru.1 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pecoru.1 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pecoru.1 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pecoru.1 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pecoru.1 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pecoru.1 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pecoru.1 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pecoru.1 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pecoru.1 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pecoru.1 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pecoru.1 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pecoru.1 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pecoru.1 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pecoru.1 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pecoru.1 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pecoru.1 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pecoru.1 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pecoru.1 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.1 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pecoru.1 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pecoru.1 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pecoru.1 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pecoru.1 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pecoru.1 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pecoru.1 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pecoru.1 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pecoru.1 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pecoru.1 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.1 4750 ~~~|||||| C.pecoru.2 0 -------------------------------------------------- C.pecoru.2 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.pecoru.2 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAA|AG|GC-GAUGAAG C.pecoru.2 150 GA|UGCG(UUUA-CC-)U|-GCA-UUAAUCUUCGGC|-GAGCU(G-GU-A C.pecoru.2 200 UAA-)AGCUAUG-ACC-CGGAGGUU|UCCGAAUGGG(AAAA)CCC|gaua C.pecoru.2 250 gau-(--------------------------------------------- C.pecoru.2 300 -------------------------------------------------- C.pecoru.2 350 -------------------------------------------------- C.pecoru.2 400 -------------------------------------------------- C.pecoru.2 450 ---uaaua)-gucuauc-AUUA-UACGCU(GA-AUCCA--UA)GGC-GUA C.pecoru.2 500 -U-A--AGG-CGAAAC|CU-ACUGAACU|GA(AACA)UCUUAGUA-AGUA C.pecoru.2 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pecoru.2 600 CGA-AAG-GGGA-ACA-GUCUAAAccauau-u-------------(-uuu C.pecoru.2 650 -)-------------aauaugggguuguagggucgauaa----------- C.pecoru.2 700 ------------------------------cgugagaucuuaaguuuu-a C.pecoru.2 750 guuGAAuauuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pecoru.2 800 )CCCGU-Aaac-gaaaaaacaa-aagacu--------------------- C.pecoru.2 850 --cuauucgauuccu---GAGUAGAACUAGA(CACGUG-AAG)CCUAGUU C.pecoru.2 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGACUAA----AUACUAAUC C.pecoru.2 950 AAUGACCUAUAGUG-AAC-CAGUCCU(GUAA)-AGGA-AAGGUGAAAA-G C.pecoru.2 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pecoru.2 1050 UAUAA-G-CGGUCGAAGACC-uau---aac-uc-----(----uucg--) C.pecoru.2 1100 --------ga-gugau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pecoru.2 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.pecoru.2 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pecoru.2 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.pecoru.2 1300 GAAAC-CAA-GUGA-UCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pecoru.2 1350 AC-UUUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.pecoru.2 1400 AUGAG-UUGUGAAUAGGG-U(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pecoru.2 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pecoru.2 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pecoru.2 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.2 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pecoru.2 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pecoru.2 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pecoru.2 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pecoru.2 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pecoru.2 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pecoru.2 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pecoru.2 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pecoru.2 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pecoru.2 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pecoru.2 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pecoru.2 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pecoru.2 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pecoru.2 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pecoru.2 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pecoru.2 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pecoru.2 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pecoru.2 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pecoru.2 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pecoru.2 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pecoru.2 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pecoru.2 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pecoru.2 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pecoru.2 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pecoru.2 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pecoru.2 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pecoru.2 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pecoru.2 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pecoru.2 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.2 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pecoru.2 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pecoru.2 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pecoru.2 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pecoru.2 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pecoru.2 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pecoru.2 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pecoru.2 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pecoru.2 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pecoru.2 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.2 4750 ~~~|||||| C.pecoru.3 0 -------------------------------------------------- C.pecoru.3 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.pecoru.3 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAA|AG|GC-GAUGAAG C.pecoru.3 150 GA|UGCG(UUUA-CC-)U|-GCA-UUAAUCUUCGGC|-GAGCU(G-GU-A C.pecoru.3 200 UAA-)AGCUAUG-ACC-CGGAGGUU|UCCGAAUGGG(AAAA)CCC|gaua C.pecoru.3 250 gau-(--------------------------------------------- C.pecoru.3 300 -------------------------------------------------- C.pecoru.3 350 -------------------------------------------------- C.pecoru.3 400 -------------------------------------------------- C.pecoru.3 450 ---uaaua)-gucuauc-AUUA-UACGCU(GA-AUCCA--UA)GGC-GUA C.pecoru.3 500 -U-A--AGG-CGAAAC|CU-ACUGAACU|GA(AACA)UCUUAGUA-AGUA C.pecoru.3 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pecoru.3 600 CGA-AAG-GGGA-ACA-GUCUAAAccauau-u-------------(-uuu C.pecoru.3 650 -)-------------aauaugggguuguagggucgauaa----------- C.pecoru.3 700 ------------------------------cgugagaucuuaaguuuu-a C.pecoru.3 750 guuGAAuauuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUGGU C.pecoru.3 800 )CCCGU-Aaac-gaaaaaacaa-aagacu--------------------- C.pecoru.3 850 --cuauucgauuccu---GAGUAGAACUAGA(CACGUG-AAA)CCUAGUU C.pecoru.3 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGACUAA----AUACUAAUC C.pecoru.3 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUAA)-AGGA-AAGGUGAAAA-G C.pecoru.3 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pecoru.3 1050 UAUAA-G-CGGUCGAAGACC-uau---aac-uc-----(----uucg--) C.pecoru.3 1100 --------ga-gugau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pecoru.3 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.pecoru.3 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pecoru.3 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.pecoru.3 1300 GAAAC-CAA-GUGA-UCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pecoru.3 1350 AC-UUUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.pecoru.3 1400 AUGAG-UUGUGAAUAGGG-U(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pecoru.3 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pecoru.3 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pecoru.3 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.3 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pecoru.3 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pecoru.3 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pecoru.3 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pecoru.3 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pecoru.3 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pecoru.3 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pecoru.3 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pecoru.3 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pecoru.3 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pecoru.3 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pecoru.3 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pecoru.3 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pecoru.3 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pecoru.3 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pecoru.3 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pecoru.3 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pecoru.3 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pecoru.3 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pecoru.3 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pecoru.3 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pecoru.3 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pecoru.3 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pecoru.3 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pecoru.3 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pecoru.3 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pecoru.3 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pecoru.3 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pecoru.3 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.3 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pecoru.3 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pecoru.3 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pecoru.3 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pecoru.3 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pecoru.3 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pecoru.3 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pecoru.3 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pecoru.3 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pecoru.3 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.3 4750 ~~~|||||| C.pecoru.4 0 -------------------------------------------------- C.pecoru.4 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.pecoru.4 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAA|AG|GC-GAUGAAG C.pecoru.4 150 GA|UGCG(UUUA-CC-)U|-GCA-UUAAUCUUCGGC|-GAGCU(G-GU-A C.pecoru.4 200 UAA-)AGCUAUG-ACC-CGGAGGUU|UCCGAAUGGG(AAAA)CCC|gaua C.pecoru.4 250 gau-(--------------------------------------------- C.pecoru.4 300 -------------------------------------------------- C.pecoru.4 350 -------------------------------------------------- C.pecoru.4 400 -------------------------------------------------- C.pecoru.4 450 ---uaaua)-gucuauc-AUUA-UACGCU(GA-AUCCA--UA)GGC-GUA C.pecoru.4 500 -U-A--AGG-CGAAAC|CU-ACUGAACU|GA(AACA)UCUUAGUA-AGUA C.pecoru.4 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pecoru.4 600 CGA-AAG-GGGA-ACA-GUCUAAAccauau-u-------------(-uuu C.pecoru.4 650 -)-------------aauaugggguuguagggucgauaa----------- C.pecoru.4 700 ------------------------------cgugagaucuuaaguuuu-a C.pecoru.4 750 guuGAAuauuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pecoru.4 800 )CCCGU-Aaac-gaaaaaacaa-aagacu--------------------- C.pecoru.4 850 --cuauucgauuccu---GAGUAGAACUAGA(CACGUG-AAA)CCUAGUU C.pecoru.4 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGACUAA----AUACUAAUC C.pecoru.4 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUAA)-AGGA-AAGGUGAAAA-G C.pecoru.4 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pecoru.4 1050 UAUAA-G-CGGUCGAAGACC-uau---aac-uc-----(----uucg--) C.pecoru.4 1100 --------ga-gugau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pecoru.4 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.pecoru.4 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pecoru.4 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.pecoru.4 1300 GAAAC-CAA-GUGA-UCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pecoru.4 1350 AC-UUUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.pecoru.4 1400 AUGAG-UUGUGAAUAGGG-U(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pecoru.4 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pecoru.4 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pecoru.4 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.4 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pecoru.4 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pecoru.4 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pecoru.4 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pecoru.4 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pecoru.4 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pecoru.4 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pecoru.4 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pecoru.4 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pecoru.4 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pecoru.4 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pecoru.4 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pecoru.4 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pecoru.4 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pecoru.4 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pecoru.4 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pecoru.4 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pecoru.4 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pecoru.4 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pecoru.4 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pecoru.4 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pecoru.4 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pecoru.4 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pecoru.4 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pecoru.4 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pecoru.4 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pecoru.4 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pecoru.4 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pecoru.4 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.4 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pecoru.4 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pecoru.4 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pecoru.4 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pecoru.4 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pecoru.4 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pecoru.4 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pecoru.4 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pecoru.4 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pecoru.4 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.4 4750 ~~~|||||| C.pecoru.5 0 -------------------------------------------------- C.pecoru.5 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.pecoru.5 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAA|AG|GC-GAUGAAG C.pecoru.5 150 GA|UGCG(UUUA-CC-)U|-GCA-UUAAUCUUCGGC|-GAGCU(G-GU-A C.pecoru.5 200 UAA-)AGCUAUG-ACC-CGGAGGUU|UCCGAAUGGG(AAAA)CCC|gaua C.pecoru.5 250 gau-(--------------------------------------------- C.pecoru.5 300 -------------------------------------------------- C.pecoru.5 350 -------------------------------------------------- C.pecoru.5 400 -------------------------------------------------- C.pecoru.5 450 ---uaaua)-gucuauc-AUUA-UACGCU(GA-AUCCA--UA)GGC-GUA C.pecoru.5 500 -U-A--AGG-CGAAAC|CU-ACUGAACU|GA(AACA)UCUUAGUA-AGUA C.pecoru.5 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pecoru.5 600 CGA-AAG-GGGA-ACA-GUCUAAAccauau-u-------------(-uuu C.pecoru.5 650 -)-------------aauaugggguuguagggucgauaa----------- C.pecoru.5 700 ------------------------------cgugagaucuuaaguuuu-a C.pecoru.5 750 guuGAAuauuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pecoru.5 800 )CCCGU-Aaac-gaaaaaacaa-aagacu--------------------- C.pecoru.5 850 --cuauucgauuccu---GAGUAGAACUAGA(CACGUG-AAA)CCUAGUU C.pecoru.5 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGACUAA----AUACUAAUC C.pecoru.5 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUAA)-AGGA-AAGGUGAAAA-G C.pecoru.5 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pecoru.5 1050 UAUAA-G-CGGUCGAAGACC-uau---aac-uc-----(----uucg--) C.pecoru.5 1100 --------ga-gugau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pecoru.5 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.pecoru.5 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pecoru.5 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.pecoru.5 1300 GAAAC-CAA-GUGA-UCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pecoru.5 1350 AC-UUUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.pecoru.5 1400 AUGAG-UUGUGAAUAGGG-U(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pecoru.5 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pecoru.5 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pecoru.5 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.5 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pecoru.5 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pecoru.5 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pecoru.5 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pecoru.5 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pecoru.5 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pecoru.5 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pecoru.5 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pecoru.5 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pecoru.5 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pecoru.5 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pecoru.5 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pecoru.5 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pecoru.5 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pecoru.5 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pecoru.5 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pecoru.5 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pecoru.5 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pecoru.5 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pecoru.5 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pecoru.5 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pecoru.5 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pecoru.5 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pecoru.5 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pecoru.5 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pecoru.5 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pecoru.5 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pecoru.5 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pecoru.5 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.5 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pecoru.5 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pecoru.5 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pecoru.5 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pecoru.5 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pecoru.5 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pecoru.5 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pecoru.5 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pecoru.5 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pecoru.5 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.5 4750 ~~~|||||| C.pecoru.6 0 -------------------------------------------------- C.pecoru.6 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.pecoru.6 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAA|AG|GC-GAUGAAG C.pecoru.6 150 GA|UGCG(UUUA-CC-)U|-GCA-UUAAUCUUCGGC|-GAGCU(G-GU-A C.pecoru.6 200 UAA-)AGCUAUG-ACC-CGGAGGUU|UCCGAAUGGG(AAAA)CCC|gaua C.pecoru.6 250 gau-(--------------------------------------------- C.pecoru.6 300 -------------------------------------------------- C.pecoru.6 350 -------------------------------------------------- C.pecoru.6 400 -------------------------------------------------- C.pecoru.6 450 ---uaaua)-gucuauc-AUUA-UACGCU(GA-AUCCA--UA)GGC-GUA C.pecoru.6 500 -U-A--AGG-CGAAAC|CU-ACUGAACU|GA(AACA)UCUUAGUA-AGUA C.pecoru.6 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGUGUAGC(GGCGA)G C.pecoru.6 600 CGA-AAG-GGGA-ACA-GUCUAAAccauau-u-------------(-uuu C.pecoru.6 650 -)-------------aauaugggguuguagggucgauaa----------- C.pecoru.6 700 ------------------------------cgugagaucuuaaguuuu-a C.pecoru.6 750 guuGAAuauuu-c(u-ggaaa)g-uugaac|g(aua)caGGG(UGAUAGU C.pecoru.6 800 )CCCGU-Aaac-gaaaaaacaa-aagacu--------------------- C.pecoru.6 850 --cuauucgauuccu---GAGUAGAACUAGA(CACGUG-AAA)CCUAGUU C.pecoru.6 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGACUAA----AUACUAAUC C.pecoru.6 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUAA)-AGGA-AAGGUGAAAA-G C.pecoru.6 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.pecoru.6 1050 UAUAA-G-CGGUCGAAGACC-uau---aac-uc-----(----uucg--) C.pecoru.6 1100 --------ga-gugau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.pecoru.6 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.pecoru.6 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.pecoru.6 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.pecoru.6 1300 GAAAC-CAA-GUGA-UCUAUUUAUGAC|CAGGUUGAAGCAUUGG(UAAG) C.pecoru.6 1350 AC-UUUGUGGAGGACCGAACU-AGUACCU(-GUUGAAAA)AGGUU|UGG- C.pecoru.6 1400 AUGAG-UUGUGAAUAGGG-U(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.pecoru.6 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.pecoru.6 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.pecoru.6 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.6 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.pecoru.6 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.pecoru.6 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.pecoru.6 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.pecoru.6 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.pecoru.6 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.pecoru.6 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.pecoru.6 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.pecoru.6 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.pecoru.6 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.pecoru.6 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.pecoru.6 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.pecoru.6 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.pecoru.6 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.pecoru.6 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.pecoru.6 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.pecoru.6 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.pecoru.6 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.pecoru.6 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.pecoru.6 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.pecoru.6 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.pecoru.6 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.pecoru.6 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.pecoru.6 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.pecoru.6 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.pecoru.6 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.pecoru.6 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.pecoru.6 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.pecoru.6 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.pecoru.6 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.pecoru.6 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.pecoru.6 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.pecoru.6 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.pecoru.6 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.pecoru.6 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.pecoru.6 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.pecoru.6 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.pecoru.6 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.pecoru.6 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.pecoru.6 4750 ~~~|||||| C.psitt.01 0 -------------------------------------------------- C.psitt.01 50 ----------------------------|-----UACAGACCAAGUUAU- C.psitt.01 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.01 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.01 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.01 250 gau-(--------------------------------------------- C.psitt.01 300 -------------------------------------------------- C.psitt.01 350 -------------------------------------------------- C.psitt.01 400 -------------------------------------------------- C.psitt.01 450 ---uaauc)-aucuauc-AUUA-UACGUU(GA-AUACA--UA)GGC-GUA C.psitt.01 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.01 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUAAGUAGC(GGCGA)G C.psitt.01 600 CGA-AAG-GGGA-GAA-GACCAAAccgcau-u-------------(-uuu C.psitt.01 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.01 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.01 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.01 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.01 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.01 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.01 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.01 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.01 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.01 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.01 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.01 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.01 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.01 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.01 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.01 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)GCCAAUCAAACUUGGAGAUAUC C.psitt.01 1450 UUGUUCUCUCCGAAAUAACU(-UUAG)GGUUAGC|-CUCGGAUa---uu| C.psitt.01 1500 aagc|UUUUGG|GGGUAG|AGC-ACUGA-AUUCUAGC-GG|-GGGCC(ua C.psitt.01 1550 cc-)GGCUUACCAAAGGAAA-UCAAACUCCGAA-UA-|CCA-A-A-A--- C.psitt.01 1600 gu-----ga|GUC-CGGGAGAUAGAC--AGC-GGGG(GCUAAG)CUUCGU C.psitt.01 1650 -UGUC-GAGAGGG(-GAACAG-)CCCAGACCGCCGAUUAAG-GU|CCCA- C.psitt.01 1700 AAUUU-UAUG-C-UAA-GUG------AGUAAGGAAGUG-AUGAUUCUAA- C.psitt.01 1750 GACAGUUGGAAUGUUGGC(UUAGAGGCA)GCAAU-CAU|U(UAA)A|GAG C.psitt.01 1800 UGC(GUAACA)GC|UCACCAAU-----CGAGA-AUC-AU--UGC|GCCAA C.psitt.01 1850 UAAU-AAU--CGGGGCUcAAGCAUA-A|A|ACCGAAAUC|GCGG|gugua C.psitt.01 1900 uau----(uuau-------------------------------------- C.psitt.01 1950 -------------------------------------------------- C.psitt.01 2000 -------------------------------------------------- C.psitt.01 2050 -------------------------------------------------- C.psitt.01 2100 -------------------------------------------------- C.psitt.01 2150 -----------------------------------)-----auauacgc- C.psitt.01 2200 GG-UAGGAGAG|-----CGUA-GUA-UUC--------------------- C.psitt.01 2250 -------------------------------------------------- C.psitt.01 2300 --------------------------------A-GCAG-UGAAGGUA-U- C.psitt.01 2350 A-CC(-GUAA-)GGA--GUGCUGG|AGCGGA-UACUAGUGAAGAUCCAUG C.psitt.01 2400 GC|AUA-AGUA--ACGAUAAAGGAAG(UGAAAAU)CUUCCU|CGCC-GUA C.psitt.01 2450 AGCACAAGGUUUCCAG-GGUCAAG-(CUCGU)CU|U-CCCUGGGUUAGU| C.psitt.01 2500 CGG|C-CCCUAAGUCGAGGCA(CAAA)-U-GCGU-AGACGAUGGAGCAAC C.psitt.01 2550 AGG-(UUAAAUAUU)C-CUGU|AC|ca-c-cu-aaa-acu---------- C.psitt.01 2600 -------------------------------------------------- C.psitt.01 2650 -------------------------------------------------- C.psitt.01 2700 ---uuagcaau------ggaa--uga-cggaguacguua--agc-ac|gc C.psitt.01 2750 g-gac(ga--uugg-a-aau--)gu-ccgu-|auc--------------- C.psitt.01 2800 ---acaa-ugagac--------cgguu-aguagg(ca-aa-u-)cc|g-- C.psitt.01 2850 cuaacauaa-----------gguu-agguugug-guua|agg-|------ C.psitt.01 2900 -----gaaauc(-uucg--)gaggaa----------cugauagugug--g C.psitt.01 2950 cgca-agg-|cuuucaagaaauaauuuc-ua-gcu------------g-u C.psitt.01 3000 -ugaug--gug|a|CCGUACCU-AAACC(GACACA)GG|UGU-GCGAGA- C.psitt.01 3050 U-(GAGUA)UUCUAAGGCGC||GCGAGAUAACUUUCGUU----------- C.psitt.01 3100 ----AAGGAACUCGGCAAAUUAUCCCCGUAAC(-UUCG)GAAGAAGGGGA C.psitt.01 3150 |GCCUC--uu-agggugau--------ugcc(-uuuac)ggcaug----- C.psitt.01 3200 --a-gcucc-gg-GGGG-C|C(GCA)GAGAAAUGGCC-CAGG|CGACU-- C.psitt.01 3250 ---GU(UUAACAAAA)ACACAGCACUAUG|CAAACCU(cuaa------)- C.psitt.01 3300 GGGAAGU-AUAUGGUGUGA-CGCCUGCCCAAU|GCCA-AAA-GGUUAAAG C.psitt.01 3350 GGAUAUGUCAGCC-------(G-CAA)----------GGCAA-AGCAUUG C.psitt.01 3400 AACCCAAGCC|CUGGUGAAU|-GGC|CGCCGU(AACUAUA)ACGGUG|C( C.psitt.01 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA C.psitt.01 3500 AUGGUGUAACGA-UCUGGGCACUGUCUCAACGAAAGACUCG|GUGAAAUU C.psitt.01 3550 |GUAGUAG-CAG(UGAAGAUG)CUGUUUACCCGCAAA-AGGACGAAAAGA C.psitt.01 3600 CCCCGUGA|ACCU-UUACUGU|ACUUUGGUAUU|GAUUCUUGAUUUGUUA C.psitt.01 3650 UGUGUAGCAUAGCCAGGAGACUGAGAAC--ACUCUUC(GUCA)GGAGAGU C.psitt.01 3700 GGGAGUCAUC-G-UUGAAAUACUGGU|CUUA-ACAAGUUGGGA-AUCUAA C.psitt.01 3750 -cauaau----ucca(-uga-auc)-uggaauaug-GACAUUGCCAGACG C.psitt.01 3800 GG-CAGUUUUACUG(GGG)CGGUA|UCCUCC(UAA-AAAGUAAC)GGAGG C.psitt.01 3850 A|G|C|CCAAAGCUUAUU|UCAUCGUGG(UUGGCAA)UCACGAGUA-GA| C.psitt.01 3900 GC(G|UAAAG)GUAUAAAAUAGGUUGACUGCAAGAC(CUACAA)GUCAAG C.psitt.01 3950 CAGAGAC(GAAA)GU-CGGG|CUUAGUGAUCCGGCGGUGGAA(AGUGGA) C.psitt.01 4000 AUC|GCCGUCGCUUAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC C.psitt.01 4050 UGA--UCGCCACCAAGA(G-UUC-AUA)UCGACGUGG-CGGU-UUGGCAC C.psitt.01 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGA---A)-GGU C.psitt.01 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGcUGG C.psitt.01 4200 GUUCA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CUCUAU-CC|UUUGUG C.psitt.01 4250 G-G|CG-CAGGAUACUU|GA-|AAGGAGC-UGU--------------UCC C.psitt.01 4300 (UAGUAC(GAGA)GGACC)GGAAUGG|ACGAACCAAUGGUGUUUCGGU|U C.psitt.01 4350 GUUUU(GC-CA-)AAAGCA-UAGCCGAGUAGCU-ACGUUCGGAAAGGAUA C.psitt.01 4400 AGCAUU(GAAAGCAUCUA)AAUGCCAAGCCUCCCUU|AAGAUAAGGUAUC C.psitt.01 4450 C|CU|------(------)--------AU-GAGA|-CU|CCAUA-(UAGA C.psitt.01 4500 CU-A)UGUGG-UUGAUAG|GUUGG|GUGUG-UACGCACA--(GUAA-)-- C.psitt.01 4550 UGUGU|UU-AGCUA|A|CCAAUACUAAUA-AGUCCAUUG|ACUUGG-UUU C.psitt.01 4600 U-------|uaucauauaaaaagcucaauaggcuuuuuuauugaaauaaa C.psitt.01 4650 ucgaucaauguaaguugauacuaaagacucucuuaagcgucuauuaguau C.psitt.01 4700 acgugaauguuacguuacaagaauuugcuuggugauaauggaaa~~~~~~ C.psitt.01 4750 ~~~|||||| C.psitt.02 0 -------------------------------------------------- C.psitt.02 50 ----------------------------|-----UACAGACCAAGUUAU- C.psitt.02 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.02 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.02 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.02 250 gau-(--------------------------------------------- C.psitt.02 300 -------------------------------------------------- C.psitt.02 350 -------------------------------------------------- C.psitt.02 400 -------------------------------------------------- C.psitt.02 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GGC-GUA C.psitt.02 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.02 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUAAGUAGC(GGCGA)G C.psitt.02 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.02 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.02 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.02 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.02 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.02 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.02 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.02 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.02 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.02 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.02 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.02 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.02 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.02 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.02 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.02 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.02 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)GCCAAUCAAACUUGGAGAUAUC C.psitt.02 1450 UUGUUCUCUCCGAAAUAACU(-UUAG)GGUUAGC|-CUCGGAUa---uu| C.psitt.02 1500 aagc|UUUUGG|GGGUAG|AGC-ACUGA-AUUCUAGC-GG|-GGGCC(ua C.psitt.02 1550 cc-)GGCUUACCAACGGAAA-UCAAACUCCGAA-UA-|CCA-A-A-A--- C.psitt.02 1600 gc-----ga|GUC-CGGGAGAUAGAC--AGC-GGGG(GCUAAG)CUUCGU C.psitt.02 1650 -UGUC-GAGAGGG(-GAACAG-)CCCAGACCGCCGAUUAAG-GU|CCCA- C.psitt.02 1700 AAUUU-UAUG-C-UAA-GUG------AGUAAGGAAGUG-AUGAUUCUAA- C.psitt.02 1750 GACAGUUGGAAUGUUGGC(UUAGAGGCA)GCAAU-CAU|U(UAA)A|GAG C.psitt.02 1800 UGC(GUAACA)GC|UCACCAAU-----CGAGA-AUC-AU--UGC|GCCAA C.psitt.02 1850 UAAU-AAU--CGGGGCUcAAGCAUA-A|A|ACCGAAAUC|GCGG|gugua C.psitt.02 1900 uau----(uuau-------------------------------------- C.psitt.02 1950 -------------------------------------------------- C.psitt.02 2000 -------------------------------------------------- C.psitt.02 2050 -------------------------------------------------- C.psitt.02 2100 -------------------------------------------------- C.psitt.02 2150 -----------------------------------)-----auauacgc- C.psitt.02 2200 GG-UAGGAGAG|-----CGUA-GUA-UUC--------------------- C.psitt.02 2250 -------------------------------------------------- C.psitt.02 2300 --------------------------------A-GCAG-UGAAGGUA-U- C.psitt.02 2350 A-CC(-GUAA-)GGA--GUGCUGG|AGCGGA-UACUAGUGAAGAUCCAUG C.psitt.02 2400 GC|AUA-AGUA--ACGAUUAAGGAAG(UGAAAAU)CUUCCU|CGCC-GUA C.psitt.02 2450 AGCACAAGGUUUCCAG-GGUCAAG-(CUCGU)CU|U-CCCUGGGUUAGU| C.psitt.02 2500 CGG|C-CCCUAAGUCGAGGCA(CAAA)-U-GCGU-AGACGAUGGAGCAAC C.psitt.02 2550 AGG-(UUAAAUAUU)C-CUGU|AC|ca-c-cu-aaa-acu---------- C.psitt.02 2600 -------------------------------------------------- C.psitt.02 2650 -------------------------------------------------- C.psitt.02 2700 ---uuagcaau------ggaa--uga-cggaguacguu---agc-ac|gc C.psitt.02 2750 g-gac(ga--uugg-a-aau--)gu-ccgu-|auc--------------- C.psitt.02 2800 ---acaa-ugagac--------cgguu-aguagg(ca-aa-u-)cc|g-- C.psitt.02 2850 cuaacauaa-----------gguu-agguugug-guua|agg-|------ C.psitt.02 2900 -----gaaauc(-uucg--)gaggaa----------cugauagugug--g C.psitt.02 2950 cgca-agg-|cuuucaagaaauaauuuc-ua-gcu------------g-u C.psitt.02 3000 -ugaug--gug|a|CCGUACCU-AAACC(GACACA)GG|UGU-GCGAGA- C.psitt.02 3050 U-(GCGUA)UUCUAAGGCGG||GCGAGAUAACUUUCGUU----------- C.psitt.02 3100 ----AAGUAACUCGGCAAAUUAUCCCCGUAAC(-UUCG)GAAGAAGGGGA C.psitt.02 3150 |GCCUC--uu-agggugau--------ugcc(-uuuac)ggcaug----- C.psitt.02 3200 --a-gcucc-gg-GGGG-C|C(GCA)GAGAAAUGGCC-CAGG|CGACU-- C.psitt.02 3250 ---GU(UUAACAAAA)ACACAGCACUAUG|CAAACCU(cuaa------)G C.psitt.02 3300 GGGAAGU-AUAUGGUGUGA-CGCCUGCCCAAU|GCCA-AAA-GGUUAAAG C.psitt.02 3350 GGAUAUGUCAGCC-------(G-CAA)----------GGCAA-AGCAUUG C.psitt.02 3400 AACCCAAGCC|CUGGUGAAU|-GGC|CGCCGU(AACUAUA)ACGGUG|C( C.psitt.02 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA C.psitt.02 3500 AUGGUGUAACGA-UCUGGGCACUGUCUCAACGAAAGACUCG|GUGAAAUU C.psitt.02 3550 |GUAGUAG-CAG(UGAAGAUG)CUGUUUACCCGCAAA-AGGACGAAAAGA C.psitt.02 3600 CCCCGUGA|ACCU-UUACUGU|ACUUUGGUAUU|GAUUCUUGAUUUGUUA C.psitt.02 3650 UGUGUAGCAUAGCCAGGAGACUGAGAAC--ACUCUUC(GUCA)GGAGAGU C.psitt.02 3700 GGGAGUCAUC-G-UUGAAAUACUGGU|CUUA-ACAAGUUGGGA-AUCUAA C.psitt.02 3750 -cauaau----ucca(-uga-auc)-uggaauaug-GACAUUGCCAGACG C.psitt.02 3800 GG-CAGUUUUACUG(GGG)CGGUA|UCCUCC(UAA-AAAGUAAC)GGAGG C.psitt.02 3850 A|G|C|CCAAAGCUUAUU|UCAUCGUGG(UUGGCAA)UCACGAGUA-GA| C.psitt.02 3900 GC(G|UAAAG)GUAUAAAAUAGGUUGACUGCAAGAC(CUACAA)GUCAAG C.psitt.02 3950 CAGAGAC(GAAA)GU-CGGG|CUUAGUGAUCCGGCGGUGGAA(AGUGGA) C.psitt.02 4000 AUC|GCCGUCGCUUAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC C.psitt.02 4050 UGA--UCGCCACCAAGA(G-UUC-AUA)UCGACGUGG-CGGU-UUGGCAC C.psitt.02 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGA---A)-GGU C.psitt.02 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGcUGG C.psitt.02 4200 GUUCA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CUCUAU-CC|UUUGUG C.psitt.02 4250 G-G|CG-CAGGAUACUU|GA-|AAGGAGC-UGU--------------UCC C.psitt.02 4300 (UAGUAC(GAGA)GGACC)GGAAUGG|ACGAACCAAUGGUGUGUCGGU|U C.psitt.02 4350 GUUUU(GC-CA-)AAAGCA-UAGCCGAGUAGCU-ACGUUCGGAAAGGAUA C.psitt.02 4400 AGCAUU(GAAAGCAUCUA)AAUGCCAAGCCUCCCUU|AAGAUAAGGUAUC C.psitt.02 4450 C|CU|------(------)--------AU-GAGA|-CU|CCAUA-(UAGA C.psitt.02 4500 CU-A)UGUGG-UUGAUAG|GUUGG|GUGUG-UACGCACA--(GUAA-)-- C.psitt.02 4550 UGUGU|UU-AGCUA|A|CCAAUACUAAUA-AGUCCAUUG|ACUUGG-UUU C.psitt.02 4600 U-------|uaucauauaaaaagcucaauaggcuuuuuuguugaaauaaa C.psitt.02 4650 ucgaucaauguaaguugauacuaaagacucucuuaagcgucuauuaguau C.psitt.02 4700 acgugaauguuacguuacaagaauuugcuuggugauaaugaaaaagg~~~ C.psitt.02 4750 ~~~|||||| C.psitt.03 0 -------------------------------------------------- C.psitt.03 50 ------------------------aauu|-----UACAGACCAAGUUAU- C.psitt.03 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.03 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.03 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.03 250 gau-(--------------------------------------------- C.psitt.03 300 -------------------------------------------------- C.psitt.03 350 -------------------------------------------------- C.psitt.03 400 -------------------------------------------------- C.psitt.03 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GAC-GUA C.psitt.03 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.03 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.03 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.03 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.03 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.03 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.03 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.03 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.03 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.03 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.03 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.03 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.03 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.03 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.03 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.03 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.03 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.03 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.03 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.03 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.03 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.03 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.03 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.03 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.03 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.03 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.03 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.03 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.03 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.03 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.03 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.03 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.03 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.03 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.03 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.03 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.03 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.03 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.03 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.03 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.03 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.03 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.03 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.03 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.03 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.03 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.03 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.03 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.03 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.03 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.03 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.03 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.03 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.03 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.03 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.03 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.03 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.03 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.03 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.03 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.03 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.03 4750 ~~~|||||| C.psitt.04 0 -------------------------------------------------- C.psitt.04 50 ------------------------aauu|-----UACAGACCAAGUUGU- C.psitt.04 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.04 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.04 200 UAA-)AGCUAUG-ACC-CGGAGGUA|UCCGAAUGGG(GUAA)CCC|ggua C.psitt.04 250 gau-(--------------------------------------------- C.psitt.04 300 -------------------------------------------------- C.psitt.04 350 -------------------------------------------------- C.psitt.04 400 -------------------------------------------------- C.psitt.04 450 ---uaauc)-gucuacc-AUUA-UAUACU(GA-AUACA--UA)GGU-AUA C.psitt.04 500 -U-A--AAG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.04 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUAAGUAGC(GGCGA)G C.psitt.04 600 CGA-AAG-GGGA-GAA-GACCAAAccacgc-c-------------(-uuu C.psitt.04 650 -)-------------ggugugggguuguagggucgauaa----------- C.psitt.04 700 ------------------------------caugagaucuuaaguuuu-a C.psitt.04 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.04 800 )CCCGU-Aaac-gaaagaacaa-gagacu--------------------- C.psitt.04 850 --cuauucgaugccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.04 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.04 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.04 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.04 1050 UAUAA-G-CGGUCGGAGACC-uau---agcuuc-----(----cucg--) C.psitt.04 1100 --------gaagccau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.04 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.04 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-UA)GAGCGU-------- C.psitt.04 1250 --------------------------a-uaG-UCGUUUGAUUUA-GACAC C.psitt.04 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.04 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.04 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.04 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.04 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.04 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.04 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.04 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.04 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.04 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.04 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.04 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.04 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.04 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.04 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.04 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.04 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.04 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.04 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.04 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.04 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.04 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.04 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.04 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.04 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.04 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.04 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.04 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.04 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.04 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.04 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.04 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.04 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.04 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.04 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.04 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.04 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.04 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.04 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.04 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.04 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.04 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.04 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.04 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.04 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.04 4750 ~~~|||||| C.psitt.05 0 -------------------------------------------------- C.psitt.05 50 ------------------------aauu|-----UACAGACCAAGUUAU- C.psitt.05 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.05 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.05 200 UAA-)AGCUGUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.05 250 gau-(--------------------------------------------- C.psitt.05 300 -------------------------------------------------- C.psitt.05 350 -------------------------------------------------- C.psitt.05 400 -------------------------------------------------- C.psitt.05 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GGC-GUA C.psitt.05 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.05 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUAAGUAGC(GGCGA)G C.psitt.05 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.05 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.05 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.05 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.05 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.05 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.05 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.05 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.05 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.05 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.05 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.05 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.05 1200 C-GGAGCCGAAGC(GAAA-)GUGAGUUU(UAA-AA)GAGCGU-------- C.psitt.05 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.05 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.05 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.05 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.05 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.05 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.05 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.05 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.05 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.05 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.05 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.05 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.05 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.05 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.05 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.05 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.05 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.05 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.05 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.05 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.05 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.05 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.05 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.05 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.05 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.05 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.05 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.05 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.05 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.05 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.05 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.05 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.05 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.05 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.05 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.05 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.05 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.05 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.05 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.05 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.05 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.05 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.05 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.05 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.05 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.05 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.05 4750 ~~~|||||| C.psitt.06 0 -------------------------------------------------- C.psitt.06 50 ------------------------aauu|-----UACAGACCAAGUUAU- C.psitt.06 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.06 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.06 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.06 250 gau-(--------------------------------------------- C.psitt.06 300 -------------------------------------------------- C.psitt.06 350 -------------------------------------------------- C.psitt.06 400 -------------------------------------------------- C.psitt.06 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GGC-GUA C.psitt.06 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.06 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUAAGUAGC(GGCGA)G C.psitt.06 600 CGA-AAA-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.06 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.06 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.06 750 guuGAAuacuu-c(u-ggaaa)g-cagaac|g(aua)caGGG(UGAUAGU C.psitt.06 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.06 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.06 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.06 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.06 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.06 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.06 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.06 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.06 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.06 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.06 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.06 1350 AC-CAUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.06 1400 AUGAG-UUGCGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.06 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.06 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.06 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.06 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.06 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.06 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.06 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.06 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.06 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.06 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.06 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.06 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.06 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.06 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.06 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.06 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.06 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.06 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.06 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.06 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.06 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.06 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.06 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.06 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.06 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.06 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.06 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.06 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.06 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.06 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.06 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.06 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.06 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.06 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.06 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.06 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.06 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.06 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.06 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.06 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.06 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.06 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.06 4750 ~~~|||||| C.psitt.07 0 -------------------------------------------------- C.psitt.07 50 ------------------------aauu|-----UACAGACCAAGUUAU- C.psitt.07 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.07 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.07 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.07 250 gau-(--------------------------------------------- C.psitt.07 300 -------------------------------------------------- C.psitt.07 350 -------------------------------------------------- C.psitt.07 400 -------------------------------------------------- C.psitt.07 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GGC-GUA C.psitt.07 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.07 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUAAGUAGC(GGCGA)G C.psitt.07 600 CGA-AAA-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.07 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.07 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.07 750 guuGAAuacuu-c(u-ggaaa)g-cagaac|g(aua)caGGG(UGAUAGU C.psitt.07 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.07 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.07 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.07 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.07 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.07 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.07 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.07 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.07 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.07 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.07 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.07 1350 AC-CAUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.07 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.07 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.07 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.07 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.07 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.07 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.07 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.07 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.07 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.07 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.07 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.07 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.07 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.07 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.07 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.07 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.07 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.07 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.07 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.07 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.07 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.07 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.07 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.07 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.07 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.07 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.07 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.07 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.07 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.07 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.07 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.07 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.07 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.07 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.07 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.07 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.07 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.07 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.07 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.07 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.07 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.07 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.07 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.07 4750 ~~~|||||| C.psitt.08 0 -------------------------------------------------- C.psitt.08 50 ------------------------aauu|-----UACAGACCAAGUUAU- C.psitt.08 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.08 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.08 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.08 250 gau-(--------------------------------------------- C.psitt.08 300 -------------------------------------------------- C.psitt.08 350 -------------------------------------------------- C.psitt.08 400 -------------------------------------------------- C.psitt.08 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GAC-GUA C.psitt.08 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.08 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.08 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.08 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.08 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.08 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.08 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.08 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.08 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.08 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.08 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.08 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.08 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.08 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.08 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.08 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.08 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.08 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.08 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.08 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.08 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.08 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.08 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.08 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.08 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.08 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.08 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.08 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.08 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.08 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.08 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.08 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.08 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.08 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.08 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.08 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.08 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.08 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.08 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.08 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.08 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.08 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.08 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.08 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.08 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.08 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.08 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.08 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.08 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.08 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.08 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.08 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.08 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.08 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.08 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.08 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.08 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.08 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.08 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.08 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.08 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.08 4750 ~~~|||||| C.psitt.09 0 -------------------------------------------------- C.psitt.09 50 ------------------------aauu|-----UACAGACCAAGUUAU- C.psitt.09 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.09 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.09 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.09 250 gau-(--------------------------------------------- C.psitt.09 300 -------------------------------------------------- C.psitt.09 350 -------------------------------------------------- C.psitt.09 400 -------------------------------------------------- C.psitt.09 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GAC-GUA C.psitt.09 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.09 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.09 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.09 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.09 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.09 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.09 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.09 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.09 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.09 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-GGGA-AAGGUGAAAA-G C.psitt.09 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.09 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.09 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.09 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.09 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.09 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.09 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.09 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.09 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.09 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.09 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.09 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.09 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.09 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.09 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.09 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.09 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.09 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.09 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.09 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.09 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.09 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.09 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.09 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.09 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.09 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.09 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.09 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.09 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.09 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.09 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.09 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.09 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.09 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.09 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.09 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.09 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.09 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.09 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.09 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.09 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.09 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.09 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.09 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.09 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.09 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.09 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.09 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.09 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.09 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.09 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.09 4750 ~~~|||||| C.psitt.10 0 -------------------------------------------------- C.psitt.10 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.psitt.10 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.10 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.10 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.10 250 gau-(--------------------------------------------- C.psitt.10 300 -------------------------------------------------- C.psitt.10 350 -------------------------------------------------- C.psitt.10 400 -------------------------------------------------- C.psitt.10 450 ---uaauc)-aucuacc-AUUA-UAUGCU(GA-AUACA--UA)GGC-AUA C.psitt.10 500 -U-A--AAG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.10 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.10 600 CGA-AAG-GGGA-UUA-GACCAAAccacgu-u-------------(-uuu C.psitt.10 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.10 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.10 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aca)caGGG(UGAUAGU C.psitt.10 800 )CCCGU-Aaac-gaaaaaacaa-gagacu--------------------- C.psitt.10 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.10 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.10 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.10 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAA-UAGCU C.psitt.10 1050 UAUAA-G-CGGUCGAAGACC-uau--uagcuuu-----(----uucg--) C.psitt.10 1100 --------aaagcaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.10 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.10 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-UA)GAGCGU-------- C.psitt.10 1250 --------------------------u-uaG-UCGUUUAAUUUA-GACAC C.psitt.10 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCGUGGG(UAAG) C.psitt.10 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.10 1400 AUGAG-UUGUGAAUAGGGGU(-GAAA~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.10 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.10 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.10 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.10 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.10 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.10 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.10 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.10 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.10 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.10 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.10 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.10 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.10 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.10 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.10 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.10 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.10 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.10 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.10 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.10 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.10 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.10 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.10 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.10 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.10 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.10 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.10 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.10 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.10 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.10 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.10 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.10 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.10 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.10 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.10 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.10 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.10 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.10 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.10 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.10 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.10 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.10 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.10 4750 ~~~|||||| C.psitt.11 0 -------------------------------------------------- C.psitt.11 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.psitt.11 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.11 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.11 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.11 250 gau-(--------------------------------------------- C.psitt.11 300 -------------------------------------------------- C.psitt.11 350 -------------------------------------------------- C.psitt.11 400 -------------------------------------------------- C.psitt.11 450 ---uaauc)-aucuacc-AUUA-UAUGCU(GA-AUACA--UA)GGC-AUA C.psitt.11 500 -U-A--AAG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.11 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.11 600 CGA-AAG-GGGA-UUA-GACCAAAccacgu-u-------------(-uuu C.psitt.11 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.11 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.11 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aca)caGGG(UGAUAGU C.psitt.11 800 )CCCGU-Aaac-gaaaaaacaa-gagacu--------------------- C.psitt.11 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.11 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.11 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.11 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAA-UAGCU C.psitt.11 1050 UAUAA-G-CGGUCGAAGACC-uau--uagcuuu-----(----uucg--) C.psitt.11 1100 --------aaagcaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.11 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.11 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-UA)GAGCGU-------- C.psitt.11 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.11 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCGUGGG(UAAG) C.psitt.11 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.11 1400 AUGAG-UUGUGAAUAGGGGU(-GAAA~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.11 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.11 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.11 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.11 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.11 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.11 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.11 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.11 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.11 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.11 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.11 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.11 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.11 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.11 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.11 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.11 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.11 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.11 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.11 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.11 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.11 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.11 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.11 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.11 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.11 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.11 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.11 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.11 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.11 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.11 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.11 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.11 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.11 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.11 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.11 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.11 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.11 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.11 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.11 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.11 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.11 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.11 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.11 4750 ~~~|||||| C.psitt.12 0 -------------------------------------------------- C.psitt.12 50 ------------------------aauu|-----UACAGACCAAGUUAG- C.psitt.12 100 --UAAGAGCUAUUGGCGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.12 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.12 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.12 250 gau-(--------------------------------------------- C.psitt.12 300 -------------------------------------------------- C.psitt.12 350 -------------------------------------------------- C.psitt.12 400 -------------------------------------------------- C.psitt.12 450 ---uaauc)-aucuacc-AUUA-UAUGCU(GA-AUACA--UA)GGC-AUA C.psitt.12 500 -U-A--AAG-CGACAC|CU-GAUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.12 550 GAGGAAAAGAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.12 600 CGA-AAG-GGGA-UUA-GACCAAAccacgu-u-------------(-uuu C.psitt.12 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.12 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.12 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aca)caGGG(UGAUAGU C.psitt.12 800 )CCCGU-Aaac-gaaaaaacaa-gagacu--------------------- C.psitt.12 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.12 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.12 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.12 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAA-UAGCU C.psitt.12 1050 UAUAA-G-CGGUCGAAGACC-uau--uagcuuu-----(----uucg--) C.psitt.12 1100 --------aaagcaau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.12 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.12 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-UA)GAGCGU-------- C.psitt.12 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.12 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCGUGGG(UAAG) C.psitt.12 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.12 1400 AUGAG-UUGUGAAUAGGGGU(-GAAA~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.12 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.12 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.12 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.12 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.12 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.12 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.12 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.12 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.12 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.12 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.12 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.12 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.12 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.12 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.12 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.12 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.12 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.12 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.12 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.12 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.12 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.12 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.12 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.12 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.12 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.12 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.12 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.12 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.12 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.12 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.12 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.12 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.12 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.12 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.12 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.12 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.12 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.12 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.12 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.12 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.12 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.12 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.12 4750 ~~~|||||| C.psitt.14 0 -------------------------------------------------- C.psitt.14 50 ----------------------------|-----UACAGACCAAGUUAU- C.psitt.14 100 --UAAGAGUUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.14 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.14 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|gaua C.psitt.14 250 gau-(--------------------------------------------- C.psitt.14 300 -------------------------------------------------- C.psitt.14 350 -------------------------------------------------- C.psitt.14 400 -------------------------------------------------- C.psitt.14 450 ---uaauc)-aucuauc-AUUG-UACGCU(GA-AUACA--UA)GGC-GUA C.psitt.14 500 -U-A--AGG-CGAUAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.14 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.14 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.14 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.14 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.14 750 gucGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.14 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.14 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.14 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.14 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.14 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.14 1050 UAUAA-G-CGGUCGAGGACC-uau---aacuuc-----(----uucg--) C.psitt.14 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.14 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.14 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.14 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.14 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.14 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUC|UGG- C.psitt.14 1400 AUGAG-UUGUGAAUAGGGGC(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.14 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.14 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.14 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.14 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.14 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.14 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.14 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.14 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.14 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.14 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.14 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.14 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.14 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.14 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.14 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.14 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.14 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.14 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.14 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.14 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.14 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.14 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.14 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.14 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.14 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.14 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.14 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.14 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.14 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.14 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.14 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.14 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.14 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.14 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.14 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.14 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.14 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.14 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.14 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.14 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.14 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.14 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.14 4750 ~~~|||||| C.psitt.15 0 -------------------------------------------------- C.psitt.15 50 ----------------------------|-----UACAGACCAAGUUAU- C.psitt.15 100 --UAAGAGUUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.15 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.15 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|gaua C.psitt.15 250 gau-(--------------------------------------------- C.psitt.15 300 -------------------------------------------------- C.psitt.15 350 -------------------------------------------------- C.psitt.15 400 -------------------------------------------------- C.psitt.15 450 ---uaauc)-aucuauc-AUUG-UACGCU(GA-AUACA--UA)GGC-GUA C.psitt.15 500 -U-A--AGG-CGAUAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.15 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.15 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.15 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.15 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.15 750 gucGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.15 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.15 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.15 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.15 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.15 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.15 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uucg--) C.psitt.15 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.15 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.15 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.15 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.15 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.15 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.15 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.15 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.15 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.15 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.15 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.15 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.15 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.15 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.15 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.15 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.15 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.15 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.15 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.15 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.15 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.15 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.15 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.15 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.15 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.15 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.15 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.15 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.15 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.15 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.15 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.15 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.15 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.15 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.15 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.15 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.15 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.15 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.15 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.15 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.15 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.15 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.15 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.15 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.15 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.15 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.15 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.15 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.15 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.15 4750 ~~~|||||| C.psitt.16 0 -------------------------------------------------- C.psitt.16 50 ----------------------------|-----UACAGACCAAGUUAU- C.psitt.16 100 --UAAGAGUUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.16 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.16 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|gaua C.psitt.16 250 gau-(--------------------------------------------- C.psitt.16 300 -------------------------------------------------- C.psitt.16 350 -------------------------------------------------- C.psitt.16 400 -------------------------------------------------- C.psitt.16 450 ---uaauc)-aucuauc-AUUG-UACGCU(GA-AUACA--UA)GGC-GUA C.psitt.16 500 -U-A--AGG-CGAUAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.16 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.16 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.16 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.16 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.16 750 gucGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.16 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.16 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.16 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.16 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.16 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.16 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uucg--) C.psitt.16 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.16 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.16 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.16 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.16 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UUAG) C.psitt.16 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.16 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.16 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.16 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.16 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.16 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.16 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.16 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.16 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.16 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.16 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.16 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.16 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.16 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.16 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.16 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.16 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.16 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.16 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.16 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.16 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.16 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.16 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.16 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.16 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.16 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.16 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.16 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.16 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.16 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.16 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.16 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.16 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.16 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.16 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.16 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.16 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.16 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.16 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.16 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.16 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.16 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.16 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.16 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.16 4750 ~~~|||||| C.psitt.17 0 -------------------------------------------------- C.psitt.17 50 ----------------------------|-----UACAGACCAAGUUAU- C.psitt.17 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.17 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.17 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.17 250 gau-(--------------------------------------------- C.psitt.17 300 -------------------------------------------------- C.psitt.17 350 -------------------------------------------------- C.psitt.17 400 -------------------------------------------------- C.psitt.17 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GGC-GUA C.psitt.17 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.17 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUAAGUAGC(GGCGA)G C.psitt.17 600 CGA-AAA-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.17 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.17 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.17 750 guuGAAuacuu-c(u-ggaaa)g-cagaac|g(aua)caGGG(UGAUAGU C.psitt.17 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.17 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.17 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.17 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.17 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.17 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.17 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.17 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(uuuaca)UUC C.psitt.17 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.17 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.17 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.17 1350 AC-CAUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.17 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.17 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.17 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.17 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.17 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.17 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.17 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.17 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.17 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.17 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.17 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.17 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.17 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.17 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.17 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.17 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.17 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.17 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.17 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.17 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.17 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.17 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.17 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.17 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.17 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.17 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.17 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.17 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.17 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.17 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.17 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.17 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.17 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.17 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.17 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.17 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.17 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.17 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.17 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.17 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.17 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.17 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.17 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.17 4750 ~~~|||||| C.psitt.18 0 -------------------------------------------------- C.psitt.18 50 ----------------------------|-----UACAGACCAAGUUAU- C.psitt.18 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUUGAC|AG|GC-GAUGAAG C.psitt.18 150 GA|UGCG(UUUA-CC-)U|-GCA-GUAAUCUUCGGC|-GAGCU(G-GU-A C.psitt.18 200 UAA-)AGCUAUG-ACC-CGGAGGUC|UCCGAAUGGG(GCAA)CCC|ggua C.psitt.18 250 gau-(--------------------------------------------- C.psitt.18 300 -------------------------------------------------- C.psitt.18 350 -------------------------------------------------- C.psitt.18 400 -------------------------------------------------- C.psitt.18 450 ---uaauc)-aucuacc-AUUA-UACGUU(GA-AUACA--UA)GAC-GUA C.psitt.18 500 -U-A--AGG-CGACAC|CU-GCUGAACU|GA(AACA)UCUUAGUA-AGCA C.psitt.18 550 GAGGAAAAUAAAUC(-aaa---)GAGAU|UCC-CUGAGUAGC(GGCGA)G C.psitt.18 600 CGA-AAG-GGGA-GAA-GACCAAAccacau-u-------------(-uuu C.psitt.18 650 -)-------------aaugugggguuguagggucgauaa----------- C.psitt.18 700 ------------------------------caugggaucuuaaguuuu-a C.psitt.18 750 guuGAAuacuu-c(u-ggaaa)g-uagaac|g(aua)caGGG(UGAUAGU C.psitt.18 800 )CCCGU-Agac-gaaaaaacaa-gagacu--------------------- C.psitt.18 850 --cuauucgauaccu---GAGUAGGGCUAGA(CACGUG-AAA)CCUAGUC C.psitt.18 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGUCUAA----AUACUAGUC C.psitt.18 950 AAUGACCUAUAGUG-AAC-CAGUACU(GUGA)-AGGA-AAGGUGAAAA-G C.psitt.18 1000 AACCCU(uguua-)AGGGA--GUGAAA-UAGAACCUGAAACCAG-UAGCU C.psitt.18 1050 UAUAA-G-CGGUCGAAGACC-uau---aacuuc-----(----uuag--) C.psitt.18 1100 --------gaagucau-GGUUGACGGCGUGCCU(UUU-GCAU|G)AUGA| C.psitt.18 1150 -GCCAGGGAGUUAA-GUUA-AACGGC-GAGGUUAAGGGA(ucuaca)UUC C.psitt.18 1200 C-GGAGCCGAAGC(GAAA-)GCGAGUUU(UAA-AA)GAGCGU-------- C.psitt.18 1250 --------------------------u-uaG-UCGUUUGAUUUA-GACAC C.psitt.18 1300 GAAAC-CAA-GUGA-GCUAUUUAUGAC|CAGGUUGAAGCAUGGG(UAAG) C.psitt.18 1350 AC-CUUGUGGAGGACCGAACC-AGUACAU(-GUUGAAAA)AUGUU|UGG- C.psitt.18 1400 AUGAG-UUGUGAAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| C.psitt.18 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ C.psitt.18 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ C.psitt.18 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.18 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ C.psitt.18 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ C.psitt.18 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ C.psitt.18 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ C.psitt.18 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ C.psitt.18 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ C.psitt.18 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ C.psitt.18 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| C.psitt.18 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ C.psitt.18 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ C.psitt.18 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ C.psitt.18 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ C.psitt.18 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ C.psitt.18 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- C.psitt.18 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ C.psitt.18 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ C.psitt.18 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ C.psitt.18 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ C.psitt.18 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ C.psitt.18 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( C.psitt.18 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ C.psitt.18 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ C.psitt.18 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ C.psitt.18 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ C.psitt.18 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ C.psitt.18 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ C.psitt.18 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ C.psitt.18 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| C.psitt.18 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ C.psitt.18 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) C.psitt.18 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ C.psitt.18 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ C.psitt.18 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ C.psitt.18 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ C.psitt.18 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ C.psitt.18 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ C.psitt.18 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ C.psitt.18 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ C.psitt.18 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ C.psitt.18 4750 ~~~|||||| Simkan.ZV1 0 -------------------------------------------------- Simkan.ZV1 50 ------------------------aaau|-----UAUUGAUUAAGCUAU- Simkan.ZV1 100 --UAAGAGCUAUUGGUGGAUG|CCUUGG|CAUCGAC|AG|GC-GAUGAAG Simkan.ZV1 150 GA|CGCG(CGUA-CC-)U|-GCG-AUAAGCUUCGGG|-GAGCU(G-GA-U Simkan.ZV1 200 AGA-)AGCAUUG-AAC-CGAAGAUU|UCCGAAUGGG(GGAA)CCC|agug Simkan.ZV1 250 gag-(--------------------------------------------- Simkan.ZV1 300 -------------------------------------------------- Simkan.ZV1 350 -------------------------------------------------- Simkan.ZV1 400 -------------------------------------------------- Simkan.ZV1 450 --uuaguc)-cuccacu-AUUC-CUACCU(GA-AUACA--UA)GGG-UUG Simkan.ZV1 500 -G-A--AAG-CAAUAC|CU-GCUGAAUU|GA(GACA)UCUAAGUA-GGCA Simkan.ZV1 550 GAGGAAAAGAAAUC(-aauu--)GAGAU|UCC-CGUAGUAGC(GGCGA)G Simkan.ZV1 600 CGA-AGU-GGGA-AGA-GCCCAAAccg-aa-a-------------(auuu Simkan.ZV1 650 a)-------------uuuucgggguuguaggacuaguca----------- Simkan.ZV1 700 ------------------------------uaaagcuuaaguggacuu-a Simkan.ZV1 750 gcaUAAu-cau-c(u-gggaa)g-gugagc|g(aua)caGGG(UGAAAGC Simkan.ZV1 800 )CCCGU-Gugc-aaagagaaag-cuuaagu-------------------- Simkan.ZV1 850 -gaga-uuagcaccu---GAGUAGGGCCGGA(CACGUG-AAA)CCCGGUC Simkan.ZV1 900 UGAAUCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUCGUC Simkan.ZV1 950 GAUGACCGAUAGUG-CAC-AAGUACA(GUGA)-UGGA-AAGGUGAAAA-G Simkan.ZV1 1000 AACCCC(uguua-)GGGGA--GUGAAA-UAGAAUCUGAAACCAG-UAGCU Simkan.ZV1 1050 UACAA-G-CGGUCAGAGGCC-uau---aucccu-----(----uuu---) Simkan.ZV1 1100 --------agggaaau-GGCUGAUGGCGUGCCU(UUU-GCAU|G)AUGA| Simkan.ZV1 1150 -GCCAGCGAGUUAA-GUUA-UACGGC-UAGGUUAAGGAA(uauacg)UUC Simkan.ZV1 1200 C-GGAGCCGGAGU(GAAA-)GCGAGCGU(UAA-UA)GCGCUU-------- Simkan.ZV1 1250 --------------------------a-caG-UCGUAUGAUUUA-GACAC Simkan.ZV1 1300 GAAAC-CAA-GUGA-UCUAUCCAUGAC|CAGGAUGAAGCACGAG(UAAC) Simkan.ZV1 1350 AU-CGUGUGAAGGUCCGAACU-AGUGUAU(-GUUGAAAA)AUACU|UGG- Simkan.ZV1 1400 AUGAG-UUGUGGAUAGGGGU(-GAAAG)~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|-~~~~~~~~~~~~~| Simkan.ZV1 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|-~~~~~(~~ Simkan.ZV1 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~-~~~~~~ Simkan.ZV1 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ Simkan.ZV1 1650 ~~~~~-~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ Simkan.ZV1 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ Simkan.ZV1 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~ Simkan.ZV1 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~-~|~|~~~~~~~~~|~~~~|~~~~~ Simkan.ZV1 1900 ~~~~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~)~~~~~~~~~~~~~~ Simkan.ZV1 2200 ~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ Simkan.ZV1 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ Simkan.ZV1 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-(~~~~~)~~|~~~~~~~~~~~~~~| Simkan.ZV1 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~-~~~-~~~~~~~~~~~~~ Simkan.ZV1 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~|~~ Simkan.ZV1 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ Simkan.ZV1 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ Simkan.ZV1 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~- Simkan.ZV1 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ Simkan.ZV1 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ Simkan.ZV1 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ Simkan.ZV1 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ Simkan.ZV1 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~~ Simkan.ZV1 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( Simkan.ZV1 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ Simkan.ZV1 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ Simkan.ZV1 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ Simkan.ZV1 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ Simkan.ZV1 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ Simkan.ZV1 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~-~~~~~~~~~~~~~~ Simkan.ZV1 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ Simkan.ZV1 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| Simkan.ZV1 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ Simkan.ZV1 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) Simkan.ZV1 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ Simkan.ZV1 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ Simkan.ZV1 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ Simkan.ZV1 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ Simkan.ZV1 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ Simkan.ZV1 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ Simkan.ZV1 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ Simkan.ZV1 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ Simkan.ZV1 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Simkan.ZV1 4750 ~~~|||||| Pir.marina 0 -------------------------------------------------- Pir.marina 50 ----------------------------|----UUUGUGGUCAAGCUAU- Pir.marina 100 --UAAGGGCGUAUGGGGGAUG|UCUUGG|UAUCAGA|AG|GC-GAUGAAG Pir.marina 150 GG|CGUG(GAAG-AC-)U|-GCG-AUAAGCCUGGGG|-GAGUU(G-UCAA Pir.marina 200 ACG-)AACGUUG-AUC-CCGGGAUU|CCUGAAU---(----)---|---- Pir.marina 250 ----(--------------------------------------------- Pir.marina 300 -------------------------------------------------- Pir.marina 350 -------------------------------------------------- Pir.marina 400 -------------------------------------------------- Pir.marina 450 --------)---------Gacu-ugcguu(GA-AUACA--UA)ggc-gua Pir.marina 500 -A-G--uGG-C-uaAC|CC-AGAGAACU|GA(AACA)UCUCAGUA-CCUG Pir.marina 550 GAGGAAGAGAAAGA(-AAAC--)UCGAU|UUC-GUCAGUAGC(GGCGA)G Pir.marina 600 CGA-AAG-CGAA-AUA-GCCCAAAccgugg-gga-----------(uuu- Pir.marina 650 -)-----------uccucacgggguuguagggucucucacaug------- Pir.marina 700 ---------------------------ggaguuacaaagcaaucugcu-a Pir.marina 750 guuGAAc-gac-a(u-ggaaa)g-gucggc|c(aca)gaCGG(UGACAGC Pir.marina 800 )CCGGU-Aaac-gaaagcggaauugccuc--------------------- Pir.marina 850 -ccga-gagauaccu---GAGUAGGUUCAGG(CACGUG-AAA)CCUGGAC Pir.marina 900 UGAAUCC-ACG-GG(GACCAU)CC-CGU-AAGGCUAA----AUACUCUCU Pir.marina 950 GAUAACCGAUAGCG-AACUCAGUAUG(GCGA)-CUGA-AAGAUGAGAA-G Pir.marina 1000 AACCCC(uguua-)GGGGA--G-GUAU-GUGAACCUGAAACCAU-ACGCU Pir.marina 1050 UACAA-G-CGGUCGGAGCCC--GA--------------(----uua---) Pir.marina 1100 --------------UU-GGGUGACGGCGUGCCU(UUU-GCAU|A)AUGA| Pir.marina 1150 -UCCGGCGAGUUAC-GGUC-UGCGGC--AGGUUAAAGuc(-uuacg)gaC Pir.marina 1200 U-GAAGCCAGAGG(GAAA-)CCGAGUCU(GAA-UA)GGGCGU-------- Pir.marina 1250 ----------------------------uaG-UCGUAGGCUGUA-GACGC Pir.marina 1300 GAAAC-CAA-GUGA-UCUACCCAUGAG|CAGGUUGAAGCGCGGG(UUAU) Pir.marina 1350 AC-CGCGUGGAGGACCGAACC-CACUUGG(-GUUGAAAA)CCGAG|GGG- Pir.marina 1400 AUGAC-UUGUGGGGAGGAGU(-GAAAG)UCUAAUCAAACUUGGAGAUAUC Pir.marina 1450 UCGUUCUCUCCGAAAUAGCU(-UUAG)GGCUAGC|-CUUGAGCca--cu| Pir.marina 1500 -acg|CACCGG|GGGUAG|AGAGACUGA-AUCGAUUUGGG|-GCCCC(uu Pir.marina 1550 ccc)GGGGUACCCUGUCGGA-CCAAACUCCGAA-UA-|CCG-G-G-G--- Pir.marina 1600 cgac---ua|UCU-CAGGAGUCAGUC--CAC-GAGG(GAUAAG)CUUCGU Pir.marina 1650 -GGUC-GAGAGGG(-AAACAA-)CCCAGACCGUCUGUUAAG-GU|CCCG- Pir.marina 1700 AAG-A-GACG-C-UCA-GUC------ACUAAGGAGGUU-GAAUUACUGU- Pir.marina 1750 GACAACCAGGAUGUUGGC(UUAGAAGCA)GCCAC-CAU|U(UAA)A|AAG Pir.marina 1800 UGC(GUAACA)GC|UUACUGGU-----CGAGU-AAU-UC--UGC|GCCGA Pir.marina 1850 UAAU-G-AU-CGGGAGU-AAGCGUC-U|C|ACCGAAGCA|GCGG|ac--- Pir.marina 1900 -------(ga-aa------------------------------------- Pir.marina 1950 -------------------------------------------------- Pir.marina 2000 -------------------------------------------------- Pir.marina 2050 -------------------------------------------------- Pir.marina 2100 -------------------------------------------------- Pir.marina 2150 -----------------------------------)-----------gu- Pir.marina 2200 GG-UAGGAGAG|-----CGCC-GAUAGU---------------------- Pir.marina 2250 -------------------------------------------------- Pir.marina 2300 --------------------------------C-AGAU-ACGAGCCG-U- Pir.marina 2350 A-CC(-GAAA-)GGA--GCGGUGU|UGGGGCUAUCGGGUGAUUAUGC-CG Pir.marina 2400 GA|AUG-AGUA--ACGAUUAAACAGG(UGAGAAU)CCUGUU|CGCC-GAA Pir.marina 2450 UACCUAAGGUUUCCUG-GGGAAGG-(CAAUU)CC|G-CCCAGGGUUAGC| Pir.marina 2500 CGG|U-GCCUUAGUCGAGGCC(GAAA)-G-GCGU-AGACGAUGG-AUAGC Pir.marina 2550 AGG-(UU-AAUAUU)C-CUGC|GC|ua-g-aa-cgu-ugg---------- Pir.marina 2600 -------------------------------------------------- Pir.marina 2650 -------------------------------------------------- Pir.marina 2700 -----accgau------ggag--gga-cggcguccgaaa-ggug-au|-c Pir.marina 2750 g-ggc(ug--guggaa-ca---)gc-ccg--|uga--------------- Pir.marina 2800 ---uuugcagcaaga------ugggga-gauugg(aa-aa-u-)cc|g-- Pir.marina 2850 -cucccgg------------aauu----caagcugucg|--a-|------ Pir.marina 2900 ------ucuga(cucaa-a)uu-ga-------------gguaaucau-cg Pir.marina 2950 guag-ga--|cguccaagaaa-agcuuc-uaagggau---------ga-a Pir.marina 3000 ggcguu--uua|A|CCGUACUA-AAACU(GACACA)GG|UAG-GUAGGU- Pir.marina 3050 C-(GAGUA)GACCAAGGCGC||UCGGGAGAACAGUGGUU----------- Pir.marina 3100 ----AAGGAACUCUGCAAAAUGACCCCGUAAG(-UUCG)CGAUAAGGGGU Pir.marina 3150 |GCCCCU----gac--------------ggu(-gcaa-)gcu-------- Pir.marina 3200 ------guu---GGGGG-C|C(ACA)GAAAAUCGGCU-CUGG|CGACU-- Pir.marina 3250 ---GU(UUAUCAAAA)ACACAGGACCCUG|CUAACUC(GCAA------)G Pir.marina 3300 AGGAUGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GUA-GGUUAAGG Pir.marina 3350 AAGAGG----GU--------(G-CAA)-----------GC------UCGC Pir.marina 3400 GACCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( Pir.marina 3450 UAA)GGUAGCG-AAGUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCAUGA Pir.marina 3500 AAGGCGUAACGA-CUGGAGCACUGUCUCAAUCACUGACCCG|GUGAAAUU Pir.marina 3550 |GUAGUUG-UGG(UGAAGAUG)CCACAUACCCGCAGU-UAGACGGAAAGA Pir.marina 3600 CCCCGUGA|ACCU-UUACUGU|AGGCUGAUAUU|GGUCUGAGAUAUGUUC Pir.marina 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAUC--UCGGCGC(GCCA)GCGUCGG Pir.marina 3700 AGGAGCCGUC-C-UUGAAAUACCACC|CUGA-AUAUGUUUUAG-CUCUAA Pir.marina 3750 -CCC-UGAAUAUCCG(-uga-auc)-CGGACAGGG-AACAGUGUCAGUUG Pir.marina 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGAGUAAC)GGAGG Pir.marina 3850 A|G|U|GCAAUGGUACCC|UCAGCCUGG(UUGGCCA)UCAGGCAAA-GA| Pir.marina 3900 GC(G|CAAUG)GUAAAAGGGUGCUUGACUGCGAGAC(UUAUCG)GUCGAG Pir.marina 3950 CAGGUAC(GAAA)GU-AGGU|CAUAGUGAUCCGGUAGUCCCG(UAUGGA) Pir.marina 4000 AGG|GCUAUCGCUCAUC|AGAUAAAAGGUACUC|CGGG|GAUAACAG|GC Pir.marina 4050 UUA--UCGCAUCCGAGC(G-UCC-AUA)GCGGCGAUG-CGGU-UUGGCAC Pir.marina 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGGU(GAAGA---A)-GCU Pir.marina 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG Pir.marina 4200 GUUCA-GACC|GUC(GUGA)-GACAGGU-CGGU-CCCUAU-CU|GCUGUG Pir.marina 4250 G-G|CG-UACGAAUUUU|GA-|GGAGGUU-CUU--------------CUU Pir.marina 4300 (UAGUAC(GAGA)GGAUU)UGGAAGG|ACGACCCUCUGGUGUCCCAGU|U Pir.marina 4350 GUCAU(GC-CA-)GUGGCA-CGGCUGGAUAGCU-AUGGUCGGAAAGGAUA Pir.marina 4400 AACGCU(GAAAGCAUCUA)AGCGUGAAGCCCGCUCC|AAGAUUAGAAUUC Pir.marina 4450 G|UA|AGCAC-(-UUUA-)-GUGCG--A--GAGU|-CC|CCUGG-(AAGA Pir.marina 4500 CG-A)CCAGG-UUGAUAG|GCUGG|AUGUG-UAAGCACA--(GUAA-)-- Pir.marina 4550 UGUGU|UC-AGCUA|A|CCAGUACUAA-C-GGACGA-aA|GCUUGA-CCA Pir.marina 4600 CAUA----|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Pir.marina 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Pir.marina 4700 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Pir.marina 4750 ~~~|||||| CYANOBACTE 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ CYANOBACTE 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ CYANOBACTE 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ CYANOBACTE 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- CYANOBACTE 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ CYANOBACTE 350 -------------------------------------------------- CYANOBACTE 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ CYANOBACTE 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ CYANOBACTE 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ CYANOBACTE 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ CYANOBACTE 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 750 ~~~~~~~~~~~~~(~~~~~~~~)~~~~~-~|~(~~~)~~~~~~~~~~~~~ CYANOBACTE 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ CYANOBACTE 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ CYANOBACTE 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ CYANOBACTE 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| CYANOBACTE 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ CYANOBACTE 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ CYANOBACTE 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ CYANOBACTE 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| CYANOBACTE 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ CYANOBACTE 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ CYANOBACTE 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ CYANOBACTE 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- CYANOBACTE 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ CYANOBACTE 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ CYANOBACTE 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ CYANOBACTE 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- CYANOBACTE 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ CYANOBACTE 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ CYANOBACTE 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| CYANOBACTE 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ CYANOBACTE 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ CYANOBACTE 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ CYANOBACTE 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- CYANOBACTE 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ CYANOBACTE 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ CYANOBACTE 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ CYANOBACTE 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- CYANOBACTE 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ CYANOBACTE 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- CYANOBACTE 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ CYANOBACTE 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ CYANOBACTE 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( CYANOBACTE 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ CYANOBACTE 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ CYANOBACTE 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ CYANOBACTE 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ CYANOBACTE 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ CYANOBACTE 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ CYANOBACTE 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) CYANOBACTE 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| CYANOBACTE 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ CYANOBACTE 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ CYANOBACTE 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ CYANOBACTE 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- CYANOBACTE 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ CYANOBACTE 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ CYANOBACTE 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ CYANOBACTE 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ CYANOBACTE 4500 ~~~~~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~-~~~~~~~~~~~~~~ CYANOBACTE 4550 ~--~~~~~~|~~~~|~~~-~|~~~~~~~~~~~~~~~~~--~~~|~~~~~~ CYANOBACTE 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CYANOBACTE 4750 ~~~~||||| Syn.PCC.1 0 -------------------------------------------------- Syn.PCC.1 50 ----------------------------|---------GGUCAAGCUAC- Syn.PCC.1 100 --GAAGGGCUUACGGUGGAUA|CCUAGG|CACACAG|AG|GC-GAAGAAG Syn.PCC.1 150 GA|CGUG(GCUA-CC-)G|-ACG-AUACGCCUCGGG|-GAGCU(G-GA-A Syn.PCC.1 200 GCA-)AGCAUUG-AUC-CGAGGAUU|UCCGAAUGGG(GCAA)CCC|---- Syn.PCC.1 250 ----(--------------------------------------------- Syn.PCC.1 300 -------------------------------------------------- Syn.PCC.1 350 -------------------------------------------------- Syn.PCC.1 400 -------------------------------------------------- Syn.PCC.1 450 -ca--ugu)---------ACGG-CCACCU(GA-AUCCA--UA)GGG-UGG Syn.PCC.1 500 -C-C--Gcgac-gaAC|CC-GGCGAAUU|GA(AACA)UCUUAGUA-GCCG Syn.PCC.1 550 GAGGAAGAGAAAAC(-AAAA--)GUGAU|UCC-CUCAGUAGC(GGCGA)G Syn.PCC.1 600 CGA-ACG-GGGA-CCA-GCCUAAAccaaac-uc------------(cacg Syn.PCC.1 650 -)------------gaguuuggggucgugggacagcaa------------ Syn.PCC.1 700 -------------------------ugu------ggacugugaauguu-a Syn.PCC.1 750 gacGAAg-cag-c(u--gaaa)a-cugcac|c(aga)gaAGG(UGAAAGU Syn.PCC.1 800 )CCUGU-Aguc-gaaaauugaaacagccua-------------------- Syn.PCC.1 850 -----gcugaauccc---GAGUAGCACGGAG(CACGUG-AAA)UUCCGUG Syn.PCC.1 900 UGAAUCC-GCG-AG(GACCAC)CU-CGU-AAGGCUAA----AUACUCCUG Syn.PCC.1 950 UGUGACCGAUAGUG-AAC-CAGUACC(GCGA)-GGGA-AAGGUGAAAA-G Syn.PCC.1 1000 AACCCC(gg-aa-)GGGGA--GUGAAA-UAGAACAUGAAACCGU-GAGCU Syn.PCC.1 1050 UACAA-G-CAGUCGGAGCCC--Ga--------------(----uuca--) Syn.PCC.1 1100 --------------aC-GGGUGACGGCGUGCCU(GUU-GAAG|A)AUGA| Syn.PCC.1 1150 -GCCGGCGACUUAU-AGGC-ACUGGC--AGGUUAAggcg(-gaaa-)ugc Syn.PCC.1 1200 c-GAAGCCAAAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGa-------- Syn.PCC.1 1250 ----------------------------uaG-UCAGUGUUUAUA-GACCC Syn.PCC.1 1300 GAACC-CGG-GUGA-UCUAACCAUGGC|CAGGAUGAAGCUUGGG(UAAC) Syn.PCC.1 1350 AC-CAAGUGGAGGUCCGAACC-GACCGAU(-GUUGAAAA)AUCGG|CGG- Syn.PCC.1 1400 AUGAG-CUGUGGUUAGGGGU(-GAAAU)GCCAAUCGAACCCGGAGCUAGC Syn.PCC.1 1450 UGGUUCUCCCCGAAAUACGU(-UGAG)GCGUAGC|-GGUAUGGau---u| Syn.PCC.1 1500 -aua|GCGGUG|GGGUAG|AGC-ACUGA-UUCGGUGC-GG|-GCUGC(ga Syn.PCC.1 1550 ga-)GCGGUACCAAAUCGAG-UCAAACUCCGAA-UA-|CGC-C-G-U--g Syn.PCC.1 1600 uac-----a|CCA-UGCCAGUCAGAC--UGU-GGGG(GAUAAG)CUCCAU Syn.PCC.1 1650 -GGUC-AAGAGGG(-AAACAG-)CCCAGACCACCAGCUAAG-GU|CCUC- Syn.PCC.1 1700 AAAUC-AGAA-C-UUA-GUG------AUAAAGGAGGUG-GGAGUGCAUA- Syn.PCC.1 1750 GACAACCAGGAGGUUUGC(CUAGAAGCA)GCCAU-CCU|U(AAA)A|GAG Syn.PCC.1 1800 UGC(GUAAUA)GC|UCACUGGU-----CAAGC-GCU-CC--UGC|GCCGA Syn.PCC.1 1850 AAAU-G-AA-CGGGGCU-AAGUUCU-G|U|ACCGAAGCU|GUGG|aauug Syn.PCC.1 1900 c------(ugu--------------------------------------- Syn.PCC.1 1950 -------------------------------------------------- Syn.PCC.1 2000 -------------------------------------------------- Syn.PCC.1 2050 -------------------------------------------------- Syn.PCC.1 2100 -------------------------------------------------- Syn.PCC.1 2150 -----------------------------------)-------gcaauu- Syn.PCC.1 2200 GG-UAGGGGAG|-----CGUU-CCG-UCG--------------------- Syn.PCC.1 2250 -------------------------------------------------- Syn.PCC.1 2300 --------------------------------U-AGGG-UGAAGCGG-U- Syn.PCC.1 2350 A-GC(-GGAA-)GCA--GCCGUGG|ACGAAA-CGGAAGUGAGAAUGU-CG Syn.PCC.1 2400 GC|UUG-AGUA--GCGAAAACAUGGG(UGAGAAU)CCCAUG|CCCC-GAA Syn.PCC.1 2450 AUCCCAAGGGUUCCUC-CGGAAGG-(CUCGU)CC|G-CGGAGGGUUAGU| Syn.PCC.1 2500 CAG|G-UCCUAAGGCGAGGCA(GAAG)-U-GCGU-AGUCGAUGG-ACAAC Syn.PCC.1 2550 AGG-(UU-AAUAUU)C-CUGU|AC|cg-a-uu-uug-gau---------- Syn.PCC.1 2600 -------------------------------------------------- Syn.PCC.1 2650 -------------------------------------------------- Syn.PCC.1 2700 ----ugugc--------agag--gga-cggagaaggcua-ggcc-a-|-g Syn.PCC.1 2750 c-agg(-auguugguua-----)cc-ugu--|ccaa-------------- Syn.PCC.1 2800 ---guguccgaggc------guugagg-agc-gg(cg-aa-a-)ac|g-- Syn.PCC.1 2850 cuccg---------------agcu-gaggcgug-agug|cga-|------ Syn.PCC.1 2900 ------cccgc(-uacg--)gcggg-----------gaag--ugguu-ga Syn.PCC.1 2950 uguc-aag-|cuuccaagaaa-agcucu-aaacacguu--------aa-u Syn.PCC.1 3000 ccaaaa--uug|C|CUGUACCCUAAACC(GACACA)GG|UGG-GACGGU- Syn.PCC.1 3050 A-(GAGUA)UACCAAGGGGC||GCGAGGUAACUCUCUCU----------- Syn.PCC.1 3100 ----AAGGAACUCGGCAAAAUGACUCCGUAAC(-UUCG)GGAGAAGGAGU Syn.PCC.1 3150 |GCCCAC-----------------------c(-uaaga)c---------- Syn.PCC.1 3200 ------------GUGGG-U|C(GCA)GUGAAGAGGCC-CAGG|CGACU-- Syn.PCC.1 3250 ---GU(UUACCAAAA)ACACAGGUCUCCG|CUAAGUC(GUAA------)G Syn.PCC.1 3300 ACGAUGU-AUGGGGGCUGA-CGCCUGCCCAGU|GCCG-GAA-GGUUAAGG Syn.PCC.1 3350 AAGCUGGUCAGC--------(G-CAA)-----------GUGA-AGCUGGC Syn.PCC.1 3400 GACCGAAGCC|CCGGUGAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( Syn.PCC.1 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA Syn.PCC.1 3500 AAGGCGUAACGA-UCUGGGCGCUGUCUCAGAGAGAGGCUCG|GCGAAAUA Syn.PCC.1 3550 |GGAGUGU-CUG(UGAAGAUA)CGGACUACCUGCACC-CGGACAGAAAGA Syn.PCC.1 3600 CCCUAUGA|AGCU-UUACUGU|AGCUUGGUAUU|GGCUUCGGGCUUUGAC Syn.PCC.1 3650 UGCGCAGGAUAGGUGGGAGGCUAUGAGA--CUUUCCU(UGUG)GGGGAAG Syn.PCC.1 3700 UGGAGCCAAC-G-GUGAGAUACCACU|CUGU-CAAAGCUAGAA-GUCUAA Syn.PCC.1 3750 -CUU-UG---AGCCG(--UU-AUC)-CGGCCGAAg---cAGUAUCAGGUG Syn.PCC.1 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AAGGUAAC)GGAGG Syn.PCC.1 3850 C|G|C|GCAAAGGUUCCC|UCAGGCUGG(UUGGAAA)UCAGCCGAC-GA| Syn.PCC.1 3900 GU(G|CAAAG)GCAUAAGGGAGCUUGACUGCAAGAC(CUACAA)GUCGAG Syn.PCC.1 3950 CAGGGAC(GAAA)GU-CGGC|CUUAGUGAUCCGACGGUUCUG(AGUGGA) Syn.PCC.1 4000 AGG|GCCGUCGCUCAAC|GGAUAAAAGUUACUC|UAGG|GAUAACAG|GC Syn.PCC.1 4050 UGA--UCUCCUCCAAGA(G-UUC-ACA)UCGACGAGG-AGGU-UUGGCAC Syn.PCC.1 4100 CUCGAUGUC|GGCU|C|AUCGC|AACC|UGGGGCU(GAAGU---C)-GGU Syn.PCC.1 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGCGGUACG-UGAGCUGG Syn.PCC.1 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCAUAU-CC|GGUGCA Syn.PCC.1 4250 G-G|CG-UAAGAGUAUU|GA-|GAGGAUU-UCU--------------CCC Syn.PCC.1 4300 (UAGUAC(GAGA)GGACC)GGGAGGA|ACGCACCGCUGGUGUACCAGU|U Syn.PCC.1 4350 AUCGU(GC-CA-)ACGGUAaacGCUGGGUAGCU-ACGUGUGGAGUGGAUA Syn.PCC.1 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCCACCUC|AAGAUGAGUACUC Syn.PCC.1 4450 U|CA|UGGC--(-AUAA-)--GCCA--GU-AAGG|-UC|ACGGG-(UAGA Syn.PCC.1 4500 AC-A)CCCGU-U-AAUAG|GCGCU|AUGUG-GAAGUUCA--(GCAA-)-- Syn.PCC.1 4550 UGGAU|GA-AGCUG|A|GGCGUACUAAUA-GACCGA-GG|GCUUGA-CCU Syn.PCC.1 4600 C-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Syn.PCC.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Syn.PCC.1 4700 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Syn.PCC.1 4750 ~~~|||||| Syn.PCC.2 0 -------------------------------------------------- Syn.PCC.2 50 ----------------------------|---------GGUCAAGCUAC- Syn.PCC.2 100 --GAAGGGCUUACGGUGGAUA|CCUAGG|CACACAG|AG|GC-GAAGAAG Syn.PCC.2 150 GA|CGUG(GCUA-CC-)G|-ACG-AUACGCCUCGGG|-GAGCU(G-GA-A Syn.PCC.2 200 GCA-)AGCAUUG-AUC-CGAGGAUU|UCCGAAUGGG(GCAA)CCC|---- Syn.PCC.2 250 ----(--------------------------------------------- Syn.PCC.2 300 -------------------------------------------------- Syn.PCC.2 350 -------------------------------------------------- Syn.PCC.2 400 -------------------------------------------------- Syn.PCC.2 450 -ca--ugu)---------ACGG-CCACCU(GA-AUCCA--UA)GGG-UGG Syn.PCC.2 500 -Cgc--gAG-C-gaAC|CC-GGCGAAUU|GA(AACA)UCUUAGUA-GCCG Syn.PCC.2 550 GAGGAAGAGAAAAC(-AAAA--)GUGAU|UCC-CUCAGUAGC(GGCGA)G Syn.PCC.2 600 CGA-ACG-GGGA-CCA-GCCUAAAccaaac-uc------------(cacg Syn.PCC.2 650 -)------------gaguuuggggucgugggacagcaa------------ Syn.PCC.2 700 -------------------------ugu------ggacugugaauguu-a Syn.PCC.2 750 gacGAAg-cag-c(u--gaaa)a-cugcac|c(aga)gaAGG(UGAAAGU Syn.PCC.2 800 )CCUGU-Aguc-gaaaauugaaacagccua-------------------- Syn.PCC.2 850 -----gcugaauccc---GAGUAGCACGGAG(CACGUG-AAA)UUCCGUG Syn.PCC.2 900 UGAAUCC-GCG-AG(GACCAC)CU-CGU-AAGGCUAA----AUACUCCUG Syn.PCC.2 950 UGUGACCGAUAGUG-AAC-CAGUACC(GCGA)-GGGA-AAGGUGAAAA-G Syn.PCC.2 1000 AACCCC(gg-aa-)GGGGA--GUGAAA-UAGAACAUGAAACCGU-GAGCU Syn.PCC.2 1050 UACAA-G-CAGUCGGAGCCC--Ga--------------(----uuca--) Syn.PCC.2 1100 --------------aC-GGGUGACGGCGUGCCU(GUU-GAAG|A)AUGA| Syn.PCC.2 1150 -GCCGGCGACUUAU-AGGC-ACUGGC--AGGUUAAggcg(-gaaa-)ugc Syn.PCC.2 1200 c-GAAGCCAAAGC(GAAA-)GCGAGUCU(GAA-UA)GGCCGa-------- Syn.PCC.2 1250 ----------------------------uaG-UCAGUGUUUAUA-GACCC Syn.PCC.2 1300 GAACC-CGG-GUGA-UCUAACCAUGGC|CAGGAUGAAGCUUGGG(UAAC) Syn.PCC.2 1350 AC-CAAGUGGAGGUCCGAACC-GACCGAU(-GUUGAAAA)AUCGG|CGG- Syn.PCC.2 1400 AUGAG-CUGUGGUUAGGGGU(-GAAAU)GCCAAUCGAACCCGGAGCUAGC Syn.PCC.2 1450 UGGUUCUCCCCGAAAUACGU(-UGAG)GCGUAGC|-GGUAUGGau---u| Syn.PCC.2 1500 -aua|GCGGUG|GGGUAG|AGC-ACUGA-UUCGGUGC-GG|-GCUGC(ga Syn.PCC.2 1550 ga-)GCGGUACCAAAUCGAG-UCAAACUCCGAA-UA-|CGC-C-G-U--g Syn.PCC.2 1600 uac-----a|CCA-UGCCAGUCAGAC--UGU-GGGG(GAUAAG)CUCCAU Syn.PCC.2 1650 -GGUC-AAGAGGG(-AAACAG-)CCCAGACCACCAGCUAAG-GU|CCUC- Syn.PCC.2 1700 AAAUC-AGAA-C-UUA-GUG------AUAAAGGAGGUG-GGAGUGCAUA- Syn.PCC.2 1750 GACAACCAGGAGGUUUGC(CUAGAAGCA)GCCAU-CCU|U(AAA)A|GAG Syn.PCC.2 1800 UGC(GUAAUA)GC|UCACUGGU-----CAAGC-GCU-CC--UGC|GCCGA Syn.PCC.2 1850 AAAU-G-AA-CGGGGCU-AAGUUCU-G|U|ACCGAAGCU|GUGG|aauug Syn.PCC.2 1900 c------(ugu--------------------------------------- Syn.PCC.2 1950 -------------------------------------------------- Syn.PCC.2 2000 -------------------------------------------------- Syn.PCC.2 2050 -------------------------------------------------- Syn.PCC.2 2100 -------------------------------------------------- Syn.PCC.2 2150 -----------------------------------)-------gcaauu- Syn.PCC.2 2200 GG-UAGGGGAG|-----CGUU-CCG-UCG--------------------- Syn.PCC.2 2250 -------------------------------------------------- Syn.PCC.2 2300 --------------------------------U-AGGG-UGAAGCGG-U- Syn.PCC.2 2350 A-GC(-GGAA-)GCA--GCCGUGG|ACGAAA-CGGAAGUGAGAAUGU-CG Syn.PCC.2 2400 GC|UUG-AGUA--GCGAAAACAUGGG(UGAGAAU)CCCAUG|CCCC-GAA Syn.PCC.2 2450 AUCCCAAGGGUUCCUC-CGGAAGG-(CUCGU)CC|G-CGGAGGGUUAGU| Syn.PCC.2 2500 CAG|G-UCCUAAGGCGAGGCA(GAAG)-U-GCGU-AGUCGAUGG-ACAAC Syn.PCC.2 2550 AGG-(UU-AAUAUU)C-CUGU|AC|cg-a-uu-uug-gau---------- Syn.PCC.2 2600 -------------------------------------------------- Syn.PCC.2 2650 -------------------------------------------------- Syn.PCC.2 2700 ----ugugc--------agag--gga-cggagaaggcua-ggcc-a-|-g Syn.PCC.2 2750 c-agg(-auguugguua-----)cc-ugu--|ccaa-------------- Syn.PCC.2 2800 ---guguccgaggc------guugagg-agc-gg(cg-aa-a-)ac|g-- Syn.PCC.2 2850 cuccg---------------agcu-gaggcgug-agug|cga-|------ Syn.PCC.2 2900 -------ccgc(-uacg--)gcggg-----------gaag--ugguu-ga Syn.PCC.2 2950 uguc-aag-|cuuccaagaaa-agcucu-aaacacguu--------aa-u Syn.PCC.2 3000 ccaaaa--uug|C|CUGUACCCUAAACC(GACACA)GG|UGG-GACGGU- Syn.PCC.2 3050 A-(GAGUA)UACCAAGGGGC||GCGAGGUAACUCUCUCU----------- Syn.PCC.2 3100 ----AAGGAACUCGGCAAAAUGACUCCGUAAC(-UUCG)GGAGAAGGAGU Syn.PCC.2 3150 |GCCCAC-----------------------c(-uaaga)c---------- Syn.PCC.2 3200 ------------GUGGG-U|C(GCA)GUGAAGAGGCC-CAGG|CGACU-- Syn.PCC.2 3250 ---GU(UUACCAAAA)ACACAGGUCUCCG|CUAAGUC(GUAA------)G Syn.PCC.2 3300 ACGAUGU-AUGGGGGCUGA-CGCCUGCCCAGU|GCCG-GAA-GGUUAAGG Syn.PCC.2 3350 AAGCUGGUCAGC--------(G-CAA)-----------GUGA-AGCUGGC Syn.PCC.2 3400 GACCGAAGCC|CCGGUGAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( Syn.PCC.2 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA Syn.PCC.2 3500 AAGGCGUAACGA-UCUGGGCGCUGUCUCAGAGAGAGGCUCG|GCGAAAUA Syn.PCC.2 3550 |GGAGUGU-CUG(UGAAGAUA)CGGACUACCUGCACC-CGGACAGAAAGA Syn.PCC.2 3600 CCCUAUGA|AGCU-UUACUGU|AGCUUGGUAUU|GGCUUCGGGCUUUGAC Syn.PCC.2 3650 UGCGCAGGAUAGGUGGGAGGCUAUGAGA--CUUUCCU(UGUG)GGGGAAG Syn.PCC.2 3700 UGGAGCCAAC-G-GUGAGAUACCACU|CUGU-CAAAGCUAGAA-GUCUAA Syn.PCC.2 3750 -CUU-UG---AGCCG(--UU-AUC)-CGGC-GAAg--gcAGUAUCAGGUG Syn.PCC.2 3800 GG-CAGUUUGACUG(G--)CGG-C|GCCUCC(UAA-AAGGUAAC)GGAGG Syn.PCC.2 3850 C|G|C|GCAAAGGUUCCC|UCAGGCUGG(UUGGAAA)UCAGCCGAC-GA| Syn.PCC.2 3900 GU(G|CAAAG)GCAUAAGGGAGCUUGACUGCAAGAC(CUACAA)GUCGAG Syn.PCC.2 3950 CAGGGAC(GAAA)GU-CGGC|CUUAGUGAUCCGACGGUUCUG(AGUGGA) Syn.PCC.2 4000 AGG|GCCGUCGCUCAAC|GGAUAAAAGUUACUC|UAGG|GAUAACAG|GC Syn.PCC.2 4050 UGA--UCUCCUCCAAGA(G-UUC-ACA)UCGACGAGG-AGGU-UUGGCAC Syn.PCC.2 4100 CUCGAUGUC|GGCU|C|AUCGC|AACC|UGGGGCU(GAAGU---C)-GGU Syn.PCC.2 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGCGGUACG-UGAGCUGG Syn.PCC.2 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCAUAU-CC|GGUGCA Syn.PCC.2 4250 G-G|CG-UAAGAGUAUU|GA-|GAGGAUU-UCU--------------CCC Syn.PCC.2 4300 (UAGUAC(GAGA)GGACC)GGGAAGG|ACGCACCGCUGGUGUACCAGU|U Syn.PCC.2 4350 AUCGU(GC-CA-)ACG-UAaacGCUGGGUAGCU-ACGUGUGGAGUGGAUA Syn.PCC.2 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCCA-CUC|AAGAUGAGUACUC Syn.PCC.2 4450 U|CA|UGGC--(-AUAA-)--GCC---GU-AAGG|-UC|ACGGG-(UAGA Syn.PCC.2 4500 AC-A)CCCGU-U-AAUAG|GCGCU|AUGUG-GAAGUUCA--(GCAA-)-- Syn.PCC.2 4550 UGGAU|GA-AGCUG|A|GGCGUACUAAUA-GACCGA-GG|GCUUGA-CCU Syn.PCC.2 4600 C-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Syn.PCC.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Syn.PCC.2 4700 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Syn.PCC.2 4750 ~~~|||||| Synec.6803 0 -------------------------------------------------- Synec.6803 50 ----------------------------|--------aGGUCAAGCUAC- Synec.6803 100 --AAAGGGCUAACGGUGGAUA|CCUUGG|CACACAG|AG|GC-GAAGAAG Synec.6803 150 GA|CGUG(GUUA-CC-)G|-ACG-AAACGCUUCGGG|-GAGCU(G-GA-A Synec.6803 200 ACA-)AGCAUUG-AUC-CGGAGGUG|UCCGAAUGGG(GCAA)CCC|---- Synec.6803 250 ----(--------------------------------------------- Synec.6803 300 -------------------------------------------------- Synec.6803 350 -------------------------------------------------- Synec.6803 400 -------------------------------------------------- Synec.6803 450 --aaguga)---------ACUA-CCCGCU(GA-AUAAAA-UA)GGC-GGG Synec.6803 500 -aga--gAG-C-aaAC|CU-AGUGAACU|GA(AACA)UCUUAGUA-GCUA Synec.6803 550 GAGGAAAAGAAAAC(-AAAA--)GUGAU|UCU-CCAAGUAGC(GGCGA)G Synec.6803 600 CGA-ACG-GGGA-ACA-GCCUAAAccaauc-uu------------(uucg Synec.6803 650 -)------------aagauuggggucgugggacagcaa------------ Synec.6803 700 -------------------------cgu------ggacugaguagauu-a Synec.6803 750 gacGAAg-cag-c(u--gaaa)a-cugcac|c(aga)ggAGG(UGAAAGU Synec.6803 800 )CCUGU-Aguc-gaaaauugaaucagccua-------------------- Synec.6803 850 -----gcuguauccc---GAGUAGGUCGGAG(CUCGUG-GAA)UUCCGAU Synec.6803 900 UGAAUCA-GCC-GG(GACCAC)CC-GGU-AAGGCUAA----AUACUACUG Synec.6803 950 UGUGACCGAUAGCG-UAA--AGUACC(GCGA)-GGGA-AAGGUGAAAA-G Synec.6803 1000 AACCCC(GU-uga)GGGGA--GUGAAA-UAGAACAUGAAACCGU-UAGCC Synec.6803 1050 UACAA-G-CAAUGGGAGCUC--g---------------(---auuaaa-) Synec.6803 1100 ---------------c-gaGUGACCGUGUGCCU(GUU-GAAG|A)AUGA| Synec.6803 1150 -GCCGGCGACUUAC-AGGU-UGUGGC--AGGUUAAggug(-uguug)cac Synec.6803 1200 c-GAAGCCAAAGU(GAAA-)GCGAGCCU(GAA-UA)GGGCGU-------- Synec.6803 1250 ----------------------------uaG-UCACAAUUUGUA-GACCC Synec.6803 1300 GAACC-CGG-GUGA-UCUAACCAUGGC|CAGGAUGAAGCUUAGG(UAAC) Synec.6803 1350 AC-UAAGUGGAGGUCCGAACC-GACUAAU(-GUUGAAAA)AUUAG|CGG- Synec.6803 1400 AUGAG-CUGUGGUUAGGGGU(-GAAAU)GCCAAUCGAACCCGGAGCUAGC Synec.6803 1450 UGGUUCUCCCCGAAAUGUGU(-UUAG)GCGCAGC|-GGUUGUAaa--gu| Synec.6803 1500 -caa|CUUGGG|GGGUAA|AGC-ACUGU-UUCGCUGC-GG|-GCGGC(ga Synec.6803 1550 ga-)GCUGUACCAAAGUGAG-GCAAACUCAGAA-UA-|CCC-A-A-G--- Synec.6803 1600 aag-----a|aAC-GACCAGUAAGAC--GGU-GGGG(GAUAAG)CUUCAU Synec.6803 1650 -CGUC-GAAAGGG(-AAACAG-)CCCAGACCACCAGCUAAG-GU|CCCC- Synec.6803 1700 AAAUC-AUCA-C-UAA-GUG------AGAAAGGAGGUG-GGAGUGCAUU- Synec.6803 1750 GACAACCAGGAGGUUUGC(CUAGAAGCA)GCAAU-CCU|U(AAA)A|GAG Synec.6803 1800 UGC(GUAAUA)GC|UCACUGGU-----CAAGC-GCU-CC--UGC|GCCGA Synec.6803 1850 AAAU-G-AA-CGGGGCU-AAGUGAU-G|U|ACCGAAGCU|GUGG|acuca Synec.6803 1900 -------(gaua-------------------------------------- Synec.6803 1950 -------------------------------------------------- Synec.6803 2000 -------------------------------------------------- Synec.6803 2050 -------------------------------------------------- Synec.6803 2100 -------------------------------------------------- Synec.6803 2150 -----------------------------------)--------ugagu- Synec.6803 2200 GG-UAGGGGAG|-----CGUU-CUG-U-A--------------------- Synec.6803 2250 -------------------------------------------------- Synec.6803 2300 --------------------------------U-AGGG-UGAAGCAC-U- Synec.6803 2350 A-GC(-GGCAA)GCA--GGUGUGG|ACAGUA-CAGAAGUGAGAAUGU-CG Synec.6803 2400 GC|UUG-AGUA--GCGAAAAUAUGGG(UGAGAAU)CCCAUA|CCCC-GAA Synec.6803 2450 AUCCUAAGGGUUCCUC-CGGAAGG-(CUCGU)CC|G-CGGAGGGUUAGU| Synec.6803 2500 CAG|G-ACCUAAGGCGAGGCC(GAGA)-G-GCGU-AGUCGAUGG-ACAAC Synec.6803 2550 CGG-(UC-AAUAUU)C-CGGU|AC|ug-a-uu-aua-gau---------- Synec.6803 2600 -------------------------------------------------- Synec.6803 2650 -------------------------------------------------- Synec.6803 2700 ----ugugg--------cggg--gga-cggagaaggcua-gugc-a-|-a Synec.6803 2750 c-ugg(-aaguugguua-----)cc-agu--|ccaa-------------- Synec.6803 2800 ---gcauucgaggc------gaugaga-gac-gg(cg-aa-a-)ac|g-- Synec.6803 2850 ucuug---------------agca-gaggugug-augg|gga-|------ Synec.6803 2900 ------gucuc(-uacg--)gagac-----------gaag--ugcau-ga Synec.6803 2950 uguc-aag-|cuuccaagaaa-agcccg-aaccacguu--------aa-u Synec.6803 3000 uuauag--uca|C|CUGUACCCGAAACC(GACACA)GG|UAG-GAAGGU- Synec.6803 3050 A-(GAGAA)UACUAAGGGGC||GCGAGGUAACUCUCUCU----------- Synec.6803 3100 ----AAGGAACUCGGCAAAAUUACCCCGUAAC(-UUCG)GGAGAAGGGGU Synec.6803 3150 |GCCUCC-----------------------a(-gcaa-)u---------- Synec.6803 3200 ------------GGAGG-U|C(GCA)GUGAAUAGGCC-CAGG|CGACU-- Synec.6803 3250 ---GU(UUACCAAAA)ACACAGGUCUCCG|CAAAGUC(GUAA------)G Synec.6803 3300 ACGCAGU-AUGGGGGCUGA-CGCCUGCCCAGU|GCCG-GAA-GGUUAAGG Synec.6803 3350 AAGUUGGUCAGGga------(G-UAA)---------uccUGA-AGCUAGC Synec.6803 3400 GACUGAAGCC|CCGGUGAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( Synec.6803 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA Synec.6803 3500 AAGGCGUAACGA-UCUGGGCACUGUCUCGGAGAGAGGCUCG|GCGAAAUA Synec.6803 3550 |GGAUUGU-CUG(UGAAGAUA)CGGACUCCCUGCACC-UGGACAGAAAGA Synec.6803 3600 CCCUAUGA|AGCU-UUACUGU|AGCUUGGAAUU|GGGUUCGGGCUUUGCU Synec.6803 3650 UGCGCAGGAUAGGUGGGAGACUAUGAAG--UUGCUCU(UGUG)GGAGUAA Synec.6803 3700 UGGAGUCAAC-G-GUGAGAUACCACU|CUGG-UGAGGCUAGAA-UUCUAA Synec.6803 3750 -CUUgUu----CCCG(--UU-AUC)-CGGGAGAAG-GACAAUUUCAGGUG Synec.6803 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AAGGUAAC)GGAGG Synec.6803 3850 C|G|C|GCAAAGGUUUCC|UCAGGCUGG(UUGGAAA)UCAGCCGAA-GA| Synec.6803 3900 GU(G|UAAAA)GCAGAAGGAAGCUUGACUGUGAGAC(UGACAA)GUCAAA Synec.6803 3950 CAGGGAC(GAAA)GU-CGGC|UUUAGUGAUCCGACGGCACUG(AGUGGA) Synec.6803 4000 AGG|GCCGUCGCUCAAC|GGAUAAAAGUUACUC|UAGG|GAUAACAG|GC Synec.6803 4050 UGA--UCUCCGCCAAGA(G-UUC-ACA)UCGACGCGG-AGGU-UUGGCAC Synec.6803 4100 CUCGAUGUC|GGCU|C|AUCGC|AACC|UGGGGCG(GUAGU---A)-CGU Synec.6803 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGCGGUACG-UGAGCUGG Synec.6803 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCAUAU-CC|GGUGUA Synec.6803 4250 G-G|CG-UAAGAGUAUU|GA-|GAGGAGA-CUU--------------CCU Synec.6803 4300 (UAGUAC(GAGA)GGACC)GGGAAGU|ACGCACCUCUGGUGUACCUGU|U Synec.6803 4350 AUCGU(GC-CA-)ACGGUAAACGCAGGGUAGCC-AAGUGCGGAGUGGAUA Synec.6803 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCCACCUC|AAGAUGAGUACUC Synec.6803 4450 U|CA|UGGU--(-GUUAA)--GCCA--GU-AAGG|-UC|ACGGG-(AAGA Synec.6803 4500 CU-A)CCCGU-U-GAUAG|GCUCU|AGAUG-GAAGUCCA--(GUAA-)-- Synec.6803 4550 UGGAU|GA-AGUCG|A|GGAGUACUAAUA-GACCGA-GG|GCUUGA-CCU Synec.6803 4600 UU------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Synec.6803 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Synec.6803 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Synec.6803 4750 ~~~|||||| F.succinog 0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~ F.succinog 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ F.succinog 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ F.succinog 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ F.succinog 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~-~~~~~~~~~)~~~~~~~ F.succinog 500 ~~~~~~~~~-~~~~~~|~~~~~GGAACU|GA(AACA)UCUAAGUA-CCCG F.succinog 550 GA-GAAAAGAAAUC(-AACC--)GAGAU|UCC-CGUAGUAGU(GGUGA)G F.succinog 600 CGA-ACC-GGGA-GGA-GCCCA-----------------------(---- F.succinog 650 -)------------------------------------------------ F.succinog 700 -------------------------gacggguugcauacaguggacggaa F.succinog 750 agcGAA--ggg-a(u-ggaaa)g-cccccc|c(aca)gcagg(ugacagg F.succinog 800 )ccugu-agcgaucuuuaagcugaugu-ccg---ucgaaga--------- F.succinog 850 --------------------GUAGGGCGGGA(CACGUG-AAA)UCCUGCC F.succinog 900 UGAAGAC-GGG-GG(GACCAC)CC-UCC-AAGGCUAA----AUAcgagcg F.succinog 950 gaugACCGAUAGuG-cAc--AGUACC(AUGA)-GGGA-AAGGUGAAAA-G F.succinog 1000 CACCC-(cgaga-)-ggga--GUGAAA-UAGCGCCUGAAACCGC-GUGCA F.succinog 1050 UACAU-U-CUGUCGGAGGGA-----gga----------(----uuca--) F.succinog 1100 -----------ucc---uccugacggcgugccu(uuu-guuu|a)auga| F.succinog 1150 -gccagcgaguugcucgug-uacgGC-aaGGUUAAGGGC(-cucag)GUC F.succinog 1200 C-GGAGCCGAAGC(gaaa-)GC-GGUCU(CAA-CU)GGGCGA-------- F.succinog 1250 -------------------------cc--aG-Ucguacacggca-GACAC F.succinog 1300 GAAGCCUUA-GUGA-UCUACCCAUGGC|CAAGCUGAAGCGGAAG(UAAC) F.succinog 1350 AU-UCCGUGGAGGGCUGAAcc-gauauac(-auugaaac)guguu|cgg- F.succinog 1400 AUGAG-CUGUGGGUAGGGGU(-gaaag)gccaauCAAACUGGGCGAUAGC F.succinog 1450 UUGUUCUCUCCGAAACAUAU(uUaAG)GUAUGGC|-GUCAUGUU----A| F.succinog 1500 -gcu|ucacgG|GGGUAG|AGC-ACUGG-caggaCUA-GG|-Gggca(ca F.succinog 1550 cc-)cgcuUACCaaacccua-ucAAACUccgaa-ua-|ccg-u-g-a-ac F.succinog 1600 cgcg---au|GCA-UGGCAGACAGCC--UGC-GAGU(GAUAAG)AUCCGU F.succinog 1650 -AGAC-GAAAGGG(-aaacaac)CCCUGAccaccgacUAAGCGU|CCCCc F.succinog 1700 AAGUA-CGUG-C-CAA-GUG------GGAAAGGAUGUG-GAGCUGCACA- F.succinog 1750 GACAGCCAGGAGGUUAGC(UUAGAAGCA)GCUAU-CCU|U(UAA)A|GAA F.succinog 1800 AGC(GUAAUA)GC|UCACUGGU-----CAAGC--GC-UC--CGC|GCCAA F.succinog 1850 AAAu-g-au-CGGGACU-AAGCACG-U|C|ACCGAAGUC|GUGG|gcucu F.succinog 1900 g------(gcaa-------------------------------------- F.succinog 1950 -------------------------------------------------- F.succinog 2000 -------------------------------------------------- F.succinog 2050 -------------------------------------------------- F.succinog 2100 -------------------------------------------------- F.succinog 2150 -----------------------------------)-------cagagc- F.succinog 2200 GG-UAGGAGA-|-----cguu-ccg-ca---------------------- F.succinog 2250 -------------------------------------------------- F.succinog 2300 --------------------------------ggCCUG-GGAAGGCG-G- F.succinog 2350 G-UG(-GCGA-)ugc--ccgcUGG|aggcac-cggaaacgagaaugc-ug F.succinog 2400 gc|AUG-AGUA-uGCGAAAAUGCGGG(UGAAAAA)CCCGCA|CACC-GUA F.succinog 2450 AGUCCAAGGGUUCCCG-GGCAAGG-(AUAAU)CC|U-CCCGGGGUCAGU| F.succinog 2500 CGG|G-AUCUAAGACGAGGCC(GAGA)-G-GCGU-AGCCGAUGA-CAACC F.succinog 2550 AGG-(UG-AACAUU)C-CUGG|AC|cc-u-cc-gau-aag---------- F.succinog 2600 -------------------------------------------------- F.succinog 2650 -------------------------------------------------- F.succinog 2700 ----cgucacgaccgacgcgg--cga-cgcaugggaauu-cacg-g-|gg F.succinog 2750 c-ggc(cg--augg-a-ugcc-)gc-ugaa-|gga--------------- F.succinog 2800 ---gugc-g-aguc---------gcug-gggcgg(ca-aa-u-)cc|c-- F.succinog 2850 cccagcacaugaccca-----ggc-uccgg-------------|accccc F.succinog 2900 ---ggaa-ggc(-uucg--)gcc-------ggaa--gggg--cgccg-cg F.succinog 2950 augg-acc-|gugcCagGAAA-aaccgc-uaaggg-----------ag-c F.succinog 3000 gaacgg--agg|C|CCGUACCGUAAACC(GACACA)GG|UGG-ACGAGG- F.succinog 3050 C-(GAAUA)GCCUAAGGUGC||UCGAGACAACUCGGGAG----------- F.succinog 3100 ----AAGGAACUCGGCAAAUUAACCCCGUAAC(-UUCG)GGAUAAGGGga F.succinog 3150 |gccuccggu-cgug-----------aguac(-ggaca)guacg------ F.succinog 3200 ----gagcgucuggagg-U|C(GCA)GGGAAACGGCA-GAAG|CGACU-- F.succinog 3250 ---GU(UUACCAAAA)ACACAGGGCCAUG|CUAACAC(GCAA------)G F.succinog 3300 UG-ACGU-AUAUGGUCUGA-CACGUGCCCGGU|GCCG-GAA-GGUUAACA F.succinog 3350 Ggaggggucagc--------(g-caa)-----------g-ga-agc-cug F.succinog 3400 aaucgAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( F.succinog 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA F.succinog 3500 AUCGUGUAACGA-CUUCUGCACUGUCUCCUCCCGGGACUCG|GCGAAAUU F.succinog 3550 |GCAGUGC-CGG(UGAAGAUG)CCGGCAACCCGCACC-UGGACGGAAAGA F.succinog 3600 CCCCAUGA|ACCU-UCACUGU|AUUUUGACAUU|gguuuuagggcuggca F.succinog 3650 UGUGUAGGAUAGGUGGGAGGCUACGAGC--CGGCGAC(GCCA)GUCGUCG F.succinog 3700 GGGAGCCGUC-C-UUGAAAUACCACC|CUug-cccguuuUGAG-AUCUAA F.succinog 3750 -CCUCGU----CCCG(--UC-AUC)-CGGGACAGG-GACCGUGUCUGAUG F.succinog 3800 GU-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AAGGUAAC)GGAGG F.succinog 3850 C|A|U|CCAAAGGUUCCC|UCAGCGCGG(UCGGCAA)UCGCGCGCA-GA| F.succinog 3900 GC(A|CAAAG)GCAUAAGGGAGCUUGACUGCGAGAC(GGACAC)GUCGAG F.succinog 3950 CAGGUAC(GAAA)GU-AGGG|CUUAGUGAUCCCGCGGUACAG(CGUGGA) F.succinog 4000 AAG|GCCGUUGCUCAAU|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC F.succinog 4050 UGA--UCUCCCCCAAGC(G-UUC-AUA)GCGACGGGG-AGGU-UUGGCAC F.succinog 4100 CUCGAUGUC|GGCU|C|GUCGC|AUCC|UGGGGCU(GGAGA---A)-GGU F.succinog 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGCACG-CGAGCUGG F.succinog 4200 GUUCA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CC|GGUGUG F.succinog 4250 G-G|CG-UUCGAGACUU|GA-|GGGAAGC-UGU--------------CCU F.succinog 4300 (UAGUAC(GAGA)GGACC)GGGACGG|ACGGACUCC-GGUGUACCGG-|U F.succinog 4350 GUCGC(GC-CA-)GCGGCA-UUGCCGGGUAGCC-AUGUCCGGAUUGGAGA F.succinog 4400 AACGCU(GAAAGCAUCUA)AGCGGG~~~~~~~~~~~|~~~~~~~~~~~~~ F.succinog 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ F.succinog 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ F.succinog 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ F.succinog 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ F.succinog 4750 ~~~|||||| SPIROCHETE 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ SPIROCHETE 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ SPIROCHETE 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ SPIROCHETE 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- SPIROCHETE 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ SPIROCHETE 350 -------------------------------------------------- SPIROCHETE 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ SPIROCHETE 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ SPIROCHETE 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ SPIROCHETE 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ SPIROCHETE 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ SPIROCHETE 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ SPIROCHETE 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ SPIROCHETE 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ SPIROCHETE 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| SPIROCHETE 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ SPIROCHETE 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ SPIROCHETE 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ SPIROCHETE 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| SPIROCHETE 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ SPIROCHETE 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ SPIROCHETE 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ SPIROCHETE 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- SPIROCHETE 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ SPIROCHETE 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ SPIROCHETE 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ SPIROCHETE 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- SPIROCHETE 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ SPIROCHETE 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ SPIROCHETE 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| SPIROCHETE 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ SPIROCHETE 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ SPIROCHETE 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ SPIROCHETE 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- SPIROCHETE 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ SPIROCHETE 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ SPIROCHETE 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ SPIROCHETE 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- SPIROCHETE 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ SPIROCHETE 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- SPIROCHETE 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ SPIROCHETE 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ SPIROCHETE 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( SPIROCHETE 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ SPIROCHETE 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ SPIROCHETE 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ SPIROCHETE 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ SPIROCHETE 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ SPIROCHETE 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ SPIROCHETE 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) SPIROCHETE 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| SPIROCHETE 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ SPIROCHETE 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ SPIROCHETE 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ SPIROCHETE 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- SPIROCHETE 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ SPIROCHETE 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ SPIROCHETE 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ SPIROCHETE 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ SPIROCHETE 4500 ~~~~~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~-~~~~~~~~~~~~~~ SPIROCHETE 4550 ~--~~~~~~|~~~~|~~~-~|~~~~~~~~~~~~~~~~~--~~~|~~~~~~ SPIROCHETE 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SPIROCHETE 4750 ~~~~||||| Bra.hyodys 0 -------------------------------------------------- Bra.hyodys 50 ----------------------------|~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ Bra.hyodys 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ Bra.hyodys 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ Bra.hyodys 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ Bra.hyodys 500 ~~~~~~~~~~~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ Bra.hyodys 550 ~~~~~~~~~UAAUC(-AAAAUU)GAGAU|UCC-CUAAGUAGU(GGCGA)G Bra.hyodys 600 CGA-AAG-GGGA-AGA-GCCUAAAccuuaa-uaaugucaa--gcu(gcaa Bra.hyodys 650 -)---ggc-guuguuauuaugguguuguagggcgguaa--------guga Bra.hyodys 700 ugu(-acuu---)gcau-gc-------aucgacuuugcuuuauaugau-a Bra.hyodys 750 gugGAAc-uguuu(u-ggaaa)a-gcagac|c(aua)guGGG(UGAUAGU Bra.hyodys 800 )CCUGU-Acac-gaaaucauauaga-caagguu----------------- Bra.hyodys 850 ---uuaucgu-uccu---GAGUAGGGCGGGG(CACGUG-AAA)CCCUGUU Bra.hyodys 900 UGAAUCU-GGG-UA(GACCAC)UA-UCC-AAGGCAAA----AUACUAACC Bra.hyodys 950 AGUGACCAAUAGUG-UA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Bra.hyodys 1000 UCUCCC(GUUGA-)GGGUU--AUUAAA-UAGAACCUGAAACCUU-AAGCU Bra.hyodys 1050 UACAAGU-UAGUCAGAGGGU-ACC-cug--cua-----(--gcaauag-) Bra.hyodys 1100 --------uag--aug-gccUGAUGGCGUGCCU(UUU-GUAG|A)AUGA| Bra.hyodys 1150 -GCCUGCGACUUAU-AGUA-UGUAGC-AAGAUUAAGAGG(UAAUAG)CCU Bra.hyodys 1200 U-GUAGUCGUAGU(GAAA-)GCGA-CCU(UAA-UA)GGGCGA-------- Bra.hyodys 1250 ------------------------aau-uag-uUGCAUGCUAUACGACCC Bra.hyodys 1300 GAAGC-CAA-GUGA-UCUACCUAUGAG|CAGCGCGAAACUCGAG(UAAC) Bra.hyodys 1350 AU-CGAAUGGaGGUGCGAACC--AGUGGC(-CGUGAAAA)GGCUU|UGG- Bra.hyodys 1400 AUGAC-UUGUGGGUAGGAGU(-GAAAG)GCUAAUCAAACUUGGAGAUAGC Bra.hyodys 1450 UGGUUCUCUCCGAAAUGUCU(-UUAG)GGGCAGC|-GUUAUGUGU---U| Bra.hyodys 1500 -UAC|UUGCGG|GGGUAG|AGC-ACUAA-AUGGACUA-GG|-GCUCC(ua Bra.hyodys 1550 acc)-GAGUACCAAACCCAA-CUAAACUCCGAA-UA-|CCG-U-A-A--- Bra.hyodys 1600 GUUA---AG|AACAUGGCAGUUAGAC--AGC-GGCG(GAUAAG)CGUCAU Bra.hyodys 1650 -UGUC-AAAAGGG(-AAACAG-)CCCAGAUCCUCAGCUAAG-GU|CCCA- Bra.hyodys 1700 AAA-UCUAUG-U-UAA-GUG------GGAAAGGAUGUG-AGAAUACUUA- Bra.hyodys 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUUCCU|U(UAA)A|GAG Bra.hyodys 1800 UGC(GUAACA)GC|UCACUGGU-----CGAGU-GUUCCU--UGc|GCCGA Bra.hyodys 1850 AAAU-GUAA-CGGGGCUCAAACAUA-G|U|ACCGAAGCU|AGGG|aauua Bra.hyodys 1900 uaga---(guuaa------------------------------------- Bra.hyodys 1950 -------------------------------------------------- Bra.hyodys 2000 -------------------------------------------------- Bra.hyodys 2050 -------------------------------------------------- Bra.hyodys 2100 -------------------------------------------------- Bra.hyodys 2150 -----------------------------------)----ucuauaauu- Bra.hyodys 2200 GG-UAGGAGAG|-----CGUU-CUU-UAA--------------------- Bra.hyodys 2250 -------------------------------------------------- Bra.hyodys 2300 --------------------------------G-CCGU-CGAAGGUU-C- Bra.hyodys 2350 A-UC(-GUGA-)GGU--GGGCUGG|AGGUAU-AAGAAGUGAGGAUGC-AG Bra.hyodys 2400 GC|AUG-AGUA--ACGAGAAAACGGG(UGAGAAA)CCCGUU|CGCC-GCA Bra.hyodys 2450 AACCCAAGGUUUCCUA-GGUAAAG-(CUAAU)CU|G-CCUAGGGUUAGU| Bra.hyodys 2500 CGA|C-CCCUAAGAUGAGGCU(GAAA)-A-GCGU-AGUCGAUGG-GAAAC Bra.hyodys 2550 AGG-(UA-AAUAUU)C-CUGU|AC|ua-u-ga-uau-guu---------- Bra.hyodys 2600 -------------------------------------------------- Bra.hyodys 2650 -------------------------------------------------- Bra.hyodys 2700 ------ucgau------ggaa--uga-cacagauuguuu-augu-a-|cg Bra.hyodys 2750 c-guu(ag--auuggu-agau-)aa-cguc-|aaac-------------- Bra.hyodys 2800 ---aguu--uagac-------uugagg-uga-gu(aa-aa-u-)gc|u-- Bra.hyodys 2850 ugcuucuuuaa---------gguu-ga-ggcuggauag|uga-|------ Bra.hyodys 2900 ----cugggcu(-uucg--)gguucag---------gaag-uugcau--g Bra.hyodys 2950 agcu-agg-|cugucgagaaauaauuuu-uaagguu----------aggc Bra.hyodys 3000 -auguc--aua|A|UUGUACCGCAAACC(GACACA)GG|UGG-GUGAGA- Bra.hyodys 3050 U-(GAGUA)UUUUAAGGCGC||UCGAGAUAAUUUUCCCU----------- Bra.hyodys 3100 ----AAGGAACUUUGCAAAUUAGUUUUGUAAA(-UUCG)GAAAAAGAGAC Bra.hyodys 3150 |GCUUGAau--uuuggu----------agca(-auau-)ugagag----- Bra.hyodys 3200 ------------GAGAG-U|U(GCA)GUGAAAAGGCC-UGGC|CGACU-- Bra.hyodys 3250 ---GU(UUAACAAAA)ACACAGAUUUUUG|CAAACAU(GUAA------)A Bra.hyodys 3300 UGGAUGU-AUAGGGAUUGA-CACCUGCCCAGU|GCUG-GAA-GGUUAAAA Bra.hyodys 3350 GGAGAGGUUAGC--------(G-UAA)-----------GCGA-AGCUUCG Bra.hyodys 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( Bra.hyodys 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Bra.hyodys 3500 AUGGUGUAACGA-UCCGGGCACUGUCUCGGGGAAGAACUCG|GUGAAAUU Bra.hyodys 3550 |GAAUUAU-CAG(UGAAGAUG)CUGAUUACCCGCAAC-AGGACGGUAAGA Bra.hyodys 3600 CCCCGUGA|ACCU-UUACUAU|AACUUGACAUU|GAGUUUUGUUUUGUGA Bra.hyodys 3650 UGUGUAGGAUAGAUGGGAGGCUUUGAAG--UGGGAGC(GCCA)GCUUUCA Bra.hyodys 3700 UGGAGCCAUC-G-UUGAAAUACCAUC|CUUC-GCAAAAUGGGA-UUCUAA Bra.hyodys 3750 -CGA-UUA---GCCG(--UU-AUC)-CGGCAGUCG-GACAUUGUCAGGCG Bra.hyodys 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG Bra.hyodys 3850 C|G|U|GCAAAGGUCACC|UCAAACCGA(AUAGAAA)UCGGUAGUA-GA| Bra.hyodys 3900 GU(A|UAAAG)GCAUAAGGUGGCUUGACUGCGAGAG(AGACAU)CUCGAG Bra.hyodys 3950 CAGGUAC(GAAA)GU-AGGU|CUUAGUGAUCCGGUGGUCCCG(AGUGGA) Bra.hyodys 4000 AGG|GCCAUCGCUAAAC|GGACAAAAGGUACUC|CGGG|GAUAACAG|GC Bra.hyodys 4050 UUA--UCUCCCCCAAGA(G-UUC-AUA)UCGACGGGG-AGGU-UUGGCAC Bra.hyodys 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU Bra.hyodys 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGCUGG Bra.hyodys 4200 GUUCA-A~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ Bra.hyodys 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ Bra.hyodys 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ Bra.hyodys 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ Bra.hyodys 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ Bra.hyodys 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ Bra.hyodys 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.hyodys 4750 ~~~|||||| Bra.inno.1 0 -------------------------------------------------- Bra.inno.1 50 ----------------------------|~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ Bra.inno.1 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ Bra.inno.1 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ Bra.inno.1 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ Bra.inno.1 500 ~~~~~~~~~~~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ Bra.inno.1 550 ~~~~~~~~~UAAUC(-AAAAUU)GAGAU|UCC-CUAAGUAGU(GGCGA)G Bra.inno.1 600 CGA-AAG-GGGA-AGA-GCCUAAAccuuaa-uaaugucaa--guu(guaa Bra.inno.1 650 -)---ggc-guuguuauuaugguguuguagggcgguaa--------guga Bra.inno.1 700 ugu(-acuu---)acau-gcauc-------gacuuugcuuuauaugau-a Bra.inno.1 750 gugGAAc-uguuu(u-ggaaa)a-gcagac|c(aua)guGGG(UGAUAGU Bra.inno.1 800 )CCCGU-Acac-gaaaucauauaga-caagguu----------------- Bra.inno.1 850 ---uuaucgu-uccu---GAGUAGGGCGGGG(CACGUG-AAA)CCCUGUU Bra.inno.1 900 UGAAUCU-GGG-UA(GACCAC)UA-UCC-AAGGCAAA----AUACUAACC Bra.inno.1 950 AGUGACCAAUAGUG-UA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Bra.inno.1 1000 UCUCCC(GUUGA-)GGGUU--AUUAAA-UAGAACCUGAAACCUU-AAGCU Bra.inno.1 1050 UACAA-G-UAGUCAGAGGGU-ACc-cug--cua-----(--gcaauag-) Bra.inno.1 1100 --------uag--aug-gccUGAUGGCGUGCCU(UUU-GUAG|A)AUGA| Bra.inno.1 1150 -GCCUGCGACUUAU-AGUA-CGUAGC-AAGAUUAAGAGG(UAAUAG)CCU Bra.inno.1 1200 U-GUAGUCGUAGU(GAAA-)GCGAGCCU(UAA-UA)GGGCGA-------- Bra.inno.1 1250 ------------------------aau-uag-uUGCGUGCUAUACGACCC Bra.inno.1 1300 GAAGC-CAA-GUGA-UCUACCUAUGAG|CAGCGCGAAACUCGAG(UAAC) Bra.inno.1 1350 AU-CGAAUGGaGGUGCGAACC--AGUGGC(-CGUGAAAA)GGCUU|UGG- Bra.inno.1 1400 AUGAC-UUGUGGGUAGGAGU(-GAAAG)GCUAAUCAAACUUGGAGAUAGC Bra.inno.1 1450 UGGUUCUCUCCGAAAUGUCU(-UUAG)GGGCAGC|-GUUAUGUGU---U| Bra.inno.1 1500 -UAC|UUGCGG|GGGUAG|AGC-ACUAA-AUGGACUA-GG|-GCUCC(ua Bra.inno.1 1550 acc)-GAGUACCAAACCCAA-CUAAACUCCGAA-UA-|CCG-U-A-A--- Bra.inno.1 1600 GUUA---AG|AACAUGGCAGUUAGAC--AGC-GGCG(GAUAAG)CGUCAU Bra.inno.1 1650 -UGUC-AAAAGGG(-AAACAG-)CCCAGAUCCUCAGCUAAG-GU|CCCA- Bra.inno.1 1700 AAA-UCUAUG-U-UAA-GUG------GGAAAGGAUGUG-AGAAUACUUA- Bra.inno.1 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUUCCU|U(UAA)A|GAG Bra.inno.1 1800 UGC(GUAACA)GC|UCACUGGU-----CGAGU-GUC-CU--UGC|GCCGA Bra.inno.1 1850 AAAU-GUAA-CGGGGCUCAAACAUA-G|U|ACCGAAGCU|AGGG|aauua Bra.inno.1 1900 uaga---(guuaa------------------------------------- Bra.inno.1 1950 -------------------------------------------------- Bra.inno.1 2000 -------------------------------------------------- Bra.inno.1 2050 -------------------------------------------------- Bra.inno.1 2100 -------------------------------------------------- Bra.inno.1 2150 -----------------------------------)----ucuauaauu- Bra.inno.1 2200 GG-UAGGAGAG|-----CGUU-CUU-UAA--------------------- Bra.inno.1 2250 -------------------------------------------------- Bra.inno.1 2300 --------------------------------G-CCGU-UGAAGGUU-U- Bra.inno.1 2350 A-CC(-GUGA-)GGU--GGGCUGG|AGGUAU-AAGAAGUGAGGAUGC-AG Bra.inno.1 2400 GC|AUG-AGUA--ACGAGAAAACGGG(UGAGAAA)CCCGUU|CGCC-GCA Bra.inno.1 2450 AACCCAAGGUUUCCUA-GGUAAAG-(CUAAU)CU|G-CCUAGGGUUAGU| Bra.inno.1 2500 CGA|C-CCCUAAGAUGAGGCU(GAAA)-A-GCGU-AGUCGAUGG-GAAAC Bra.inno.1 2550 AGG-(UA-AAUAUU)C-CUGU|AC|ua-u-ga-uau-guu---------- Bra.inno.1 2600 -------------------------------------------------- Bra.inno.1 2650 -------------------------------------------------- Bra.inno.1 2700 ------ucgau------ggaa--uga-cacagauuguuu-gcgu-a-|cg Bra.inno.1 2750 c-guu(ag--auuggu-agau-)aa-cguc-|aaac-------------- Bra.inno.1 2800 ---aguu--uagac-------uuguga-uga-gu(aa-aa-u-)gc|u-- Bra.inno.1 2850 uguugcuuuaa---------gguu-ga-ggcuggauag|uga-|------ Bra.inno.1 2900 ----cugggcu(-uucg--)gguucag---------gaag-uugcgu--g Bra.inno.1 2950 agcu-agg-|cugucgagaaauaauuuu-uaagguu----------aggc Bra.inno.1 3000 -auguc--aua|A|UUGUACCGCAAACC(GACACA)GG|UGG-GUGAGA- Bra.inno.1 3050 U-(GAGUA)UUUUAAGGCGC||UCGAGAUAAUUUUCCCU----------- Bra.inno.1 3100 ----AAGGAACUUUGCAAAUUAGUUUUGUAAA(-UUCG)GAAAAAGAGAC Bra.inno.1 3150 |GCUUGAau--uuuggu----------agca(-auau-)ugagag----- Bra.inno.1 3200 ------------GAGAG-U|U(GCA)GUGAAAAGGCC-UGGC|CGACU-- Bra.inno.1 3250 ---GU(UUAACAAAA)ACACAGAUUUUUG|CAAACAU(GUAA------)A Bra.inno.1 3300 UGGAUGU-AUAGGGAUUGA-CACCUGCCCAGU|GCUG-GAA-GGUUAAAA Bra.inno.1 3350 GGAGAGGUUAGC--------(G-UAA)-----------GCGA-AGCUUCG Bra.inno.1 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( Bra.inno.1 3450 UAA)GGUAGCGcAAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Bra.inno.1 3500 AUGGUGUAACGA-UCCGGGCACUGUCUCGGGGAAGAACUCG|GUGAAAUU Bra.inno.1 3550 |GAAUUAU-CAG(UGAAGAUG)CUGAUUACCCGCAAC-AGGACGGUAAGA Bra.inno.1 3600 CCCCGUGA|ACCU-UUACUAU|AACUUGACAUU|GAGUUUUGUUUUGUGA Bra.inno.1 3650 UGUGUAGGAUAGAUGGGAGGCUUUGAAG--UGGGAGC(GCCA)GCUUUCA Bra.inno.1 3700 UGGAGCCAUC-G-UUGAAAUACCAUC|CUUC-GCAAAAUGGGA-UUCUAA Bra.inno.1 3750 -CGG-UUA---GCCG(--UU-AUC)-CGGCAGCCG-GACAUUGUCAGGCG Bra.inno.1 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG Bra.inno.1 3850 C|G|U|GCAAAGGUCACC|UCAAACCGA(AUAGAAA)UCGGUAGUA-GA| Bra.inno.1 3900 GU(A|UAAAG)GCAUAAGGUGGCUUGACUGCGAGAG(AGACAU)CUCGAG Bra.inno.1 3950 CAGGUAC(GAAA)GU-AGGU|CUUAGUGAUCCGGUGGUCCCG(AGUGGA) Bra.inno.1 4000 AGG|GCCAUCGCUAAAC|GGACAAAAGGUACUC|CGGG|GAUAACAG|GC Bra.inno.1 4050 UUA--UCUCCCCCAAGA(G-UUC-AUA)UCGACGGGG-AGGU-UUGGCAC Bra.inno.1 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU Bra.inno.1 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUCAAAGCGGUACG-CGAGCUGG Bra.inno.1 4200 GUUCA-A~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ Bra.inno.1 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ Bra.inno.1 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ Bra.inno.1 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ Bra.inno.1 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ Bra.inno.1 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ Bra.inno.1 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.1 4750 ~~~|||||| Bra.inno.2 0 -------------------------------------------------- Bra.inno.2 50 ----------------------------|~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ Bra.inno.2 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ Bra.inno.2 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ Bra.inno.2 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ Bra.inno.2 500 ~~~~~~~~~~~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ Bra.inno.2 550 ~~~~~~~~~UAAUC(-AAAAUU)GAGAU|UCC-CUAAGUAGU(GGCGA)G Bra.inno.2 600 CGA-AAG-GGGA-AGA-GCCUAAAccauaa-uaaugucaa--guu(guaa Bra.inno.2 650 -)---ggc-guuguuauuaugguguuguagggcgguga--------guga Bra.inno.2 700 ugu--acuu----acau-gc-------aucgacuuugcuuuauaugau-a Bra.inno.2 750 gugGAAc-uguuu(u-ggaaa)a-gcagac|c(aua)guGAG(UGAUAGU Bra.inno.2 800 )CUCGU-Acac-gaaaucauauaga-caagguu----------------- Bra.inno.2 850 ---uuaccgu-uccu---GAGUAGGGCGGGG(CACGUG-AAA)CCCUGUU Bra.inno.2 900 UGAAUCU-GGG-UA(GACCAC)UA-UCC-AAGGCAAA----AUACUAACC Bra.inno.2 950 AGUGACCAAUAGUG-UA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Bra.inno.2 1000 UCUCCC(GUUGA-)GGGUU--AUUAAA-UAGAACCUGAAACCUU-AAGCU Bra.inno.2 1050 UACAA-G-UAGUCAGAGGGG-ACc-cug--cua-----(--gcaauag-) Bra.inno.2 1100 --------uag--aag-gccUGAUGGCGUGCCU(UUU-GUAG|A)AUGA| Bra.inno.2 1150 -GCCUGCGACUUAU-AGUA-CGUAGC-AAGAUUAAGAGG(UAAUAG)CCU Bra.inno.2 1200 U-GUAGUCGUAGU(GAAA-)GCGAG-CU(UAA-UA)GGGCGA-------- Bra.inno.2 1250 ------------------------cau-uag-uUGCGUGCUAUACGACCC Bra.inno.2 1300 GAAGC-CAA-GUGA-UCUACCUAUGAG|CAGUGCGAAACUCGAG(UAAC) Bra.inno.2 1350 AU-CGAAUGGaGGUGCGAACC--AGUGGC(-CGUGAAAA)GGCUU|UGG- Bra.inno.2 1400 AUGAC-UUGUGGGUAGGAGU(-GAAAG)GCUAAUCAAACUUGGAGAUAGC Bra.inno.2 1450 UGGUUCUCUCCGAAAUGUCU(-UUAG)GGGCAGC|-GUUAUGUGU---U| Bra.inno.2 1500 -UAC|UUACGG|GGGUAG|AGC-ACUAA-AUGGACUA-GG|-GCUCC(ua Bra.inno.2 1550 acc)-GAGUACCAAACCCAA-CUAAACUCCGAA-UA-|CCG-U-A-A--- Bra.inno.2 1600 GUUA---AG|AGCAUGGCAGUUAGAC--AGC-GGCG(GAUAAG)CGUCAU Bra.inno.2 1650 -UGUC-AAAAGGG(-AAACAG-)CCCAGAUCCUCAGCUAAG-GU|CCCA- Bra.inno.2 1700 AAA-UCUAUG-U-UAA-GUG------GGAAAGGAUGUG-AGAAUACUUA- Bra.inno.2 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUUCCU|U(UAA)A|GAG Bra.inno.2 1800 UGC(GUAACA)GC|UCACUGGU-----CGAGU-GUU-CU--UGC|GCCGA Bra.inno.2 1850 AAAU-GUAA-CGGGGCUCAAACAUA-G|U|ACCGAAGCU|AGGG|aauua Bra.inno.2 1900 uaga---(guuaa------------------------------------- Bra.inno.2 1950 -------------------------------------------------- Bra.inno.2 2000 -------------------------------------------------- Bra.inno.2 2050 -------------------------------------------------- Bra.inno.2 2100 -------------------------------------------------- Bra.inno.2 2150 -----------------------------------)----ucuauaauu- Bra.inno.2 2200 GG-UAGGAGAG|-----CGUU-CUU-UAA--------------------- Bra.inno.2 2250 -------------------------------------------------- Bra.inno.2 2300 --------------------------------G-CCGU-UGAAGGUU-U- Bra.inno.2 2350 G-CC(-GUAA-)GGC--GGGCUGG|AGGUAU-AAGAAGUGAGGAUGC-AG Bra.inno.2 2400 GC|AUG-AGUA--ACGAGAAAACGGG(UGAGAAA)CCCGUU|CGCC-GCA Bra.inno.2 2450 AACCCAAGGUUUCCUA-GGUAAAG-(CUAAU)CU|G-CCUAGGGUUAGU| Bra.inno.2 2500 CGA|C-CCCUAAGAUGAGGCU(GAAA)-A-GCGU-AGUCGAUGG-GAAAC Bra.inno.2 2550 AGG-(UA-AAUAUU)C-CUGU|AC|ua-u-ga-uau-guu---------- Bra.inno.2 2600 -------------------------------------------------- Bra.inno.2 2650 -------------------------------------------------- Bra.inno.2 2700 ------ucgau------ggaa--uga-cacagauuguuu-acgu-a-|cg Bra.inno.2 2750 c-guu(ag--auuggu-agau-)aa-cguc-|aaac-------------- Bra.inno.2 2800 ---aguu--uagac-------uuguga-uga-gu(aa-aa-u-)gc|u-- Bra.inno.2 2850 uguugcuuuaa---------gguu-ga-ggcuggauag|uga-|------ Bra.inno.2 2900 ----cugggcu(-uucg--)gguucag---------gaag-uugcgu--g Bra.inno.2 2950 agcu-agg-|cugucgagaaauaauuuu-uaagguu----------aggc Bra.inno.2 3000 -auguc--aua|A|UUGUACCGCAAACC(GACACA)GG|UGG-GUGAGA- Bra.inno.2 3050 U-(GAGUA)UUUUAAGGCGC||UCGAGAUAAUUUUCCCU----------- Bra.inno.2 3100 ----AAGGAACUUUGCAAAUUAGUUUUGUAAA(-UUCG)GAAAAAGAGAC Bra.inno.2 3150 |GCUUGAau--uuuggu----------agca(-auau-)ugagag----- Bra.inno.2 3200 ------------GAGAG-U|U(GCA)GUGAAAAGGCC-UGGC|CGACU-- Bra.inno.2 3250 ---GU(UUAACAAAA)ACACAGAUUUUUG|CAAACAU(GUAA------)A Bra.inno.2 3300 UGGAUGU-AUAGGGAUUGA-CACCUGCCCAGU|GCUG-GAA-GGUUAAAA Bra.inno.2 3350 GGAGAGGUUAGC--------(G-UAA)-----------GCGA-AGCUUUG Bra.inno.2 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( Bra.inno.2 3450 UAA)GGUAGCGaGAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Bra.inno.2 3500 AUGGUGUAACGA-UCCGGGCACUGUCUCGGGGAAGAACUCG|GUGAAAUU Bra.inno.2 3550 |GAAUUAU-CAG(UGAAGAUG)CUGAUUACCCGCAAC-AGGACGGUAAGA Bra.inno.2 3600 CCCCGUGA|ACCU-UUACUAU|AACUUGACAUU|GAGUUUUGUUUUGUGA Bra.inno.2 3650 UGUGUAGAAUAGAUGGGAGGCUUUGAAG--UGGGAGC(GCCA)GCUUUCA Bra.inno.2 3700 UGGAGCCAUC-U-UUGAAAUACCAUC|CUUC-GCAAAAUGGGA-UUCUAA Bra.inno.2 3750 -CGA-UUA---GCCG(--UU-AUC)-CGGCAGUCG-GACAUUGUCAGGCG Bra.inno.2 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG Bra.inno.2 3850 C|G|U|GCAAAGGUCACC|UCAAACCGA(AUAGAAA)UCGGUAGUA-GA| Bra.inno.2 3900 GU(A|UAAAG)GCAUAAGGUGGCUUGACUGCGAGAG(AGACAU)CUCGAG Bra.inno.2 3950 CAGGUAC(GAAA)GU-AGGU|CUUAGUGAUCCGGUGGUCCCG(AGUGGA) Bra.inno.2 4000 AGG|GCCAUCGCUAAAC|GGACAAAAGGUACUC|CGGG|GAUAACAG|GC Bra.inno.2 4050 UUA--UCUCCCCCAAGA(G-UUC-AUA)UCGACGGGG-AGGU-UUGGCAC Bra.inno.2 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU Bra.inno.2 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGCUGG Bra.inno.2 4200 GUUCA-A~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ Bra.inno.2 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ Bra.inno.2 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ Bra.inno.2 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ Bra.inno.2 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ Bra.inno.2 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ Bra.inno.2 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.2 4750 ~~~|||||| Bra.inno.3 0 -------------------------------------------------- Bra.inno.3 50 ----------------------------|~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ Bra.inno.3 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ Bra.inno.3 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ Bra.inno.3 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ Bra.inno.3 500 ~~~~~~~~~~~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ Bra.inno.3 550 ~~~~~~~~~UAAUC(-AAAAUU)GAGAU|UCC-CUAAGUAGU(GGCGA)G Bra.inno.3 600 CGA-AAG-GGGA-AGA-GCCUAAAccauaa-uaaugucaa--guu(guaa Bra.inno.3 650 -)---ggc-guuguuauuaugguguuguagggcgguga--------guga Bra.inno.3 700 ugua-cuuacaugc-------------aucgacuuugcuuuauaugau-a Bra.inno.3 750 gugGAAc-uguuu(u-ggaaa)a-gcagac|c(aua)guGAG(UGAUAGU Bra.inno.3 800 )CUCGU-Acac-gaaaucauauaga-caagguu----------------- Bra.inno.3 850 ---uuaccgu-uccu---GAGUAGGGCGGGG(CACGUG-AAA)CCCUGUU Bra.inno.3 900 UGAAUCU-GGG-UA(GACCAC)UA-UCC-AAGGCAAA----AUACUAACC Bra.inno.3 950 AGUGACCAAUAGUG-UA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Bra.inno.3 1000 UCUCCC(GUUGA-)GGGUU--AUUAAA-UAGAACCUGAAACCUU-AAGCU Bra.inno.3 1050 UACAA-G-UAGUCAGAGGGG-ACc-cug--cua-----(--gcaauag-) Bra.inno.3 1100 --------uag--aag-gccUGAUGGCGUGCCU(UUU-GUAG|A)AUGA| Bra.inno.3 1150 -GCCUGCGACUUAU-AGUA-CGUAGC-AAGAUUAAGAGG(UAAUAG)CCU Bra.inno.3 1200 U-GUAGUCGUAGU(GAAA-)GCGAG-CU(UAA-UA)GGGCGA-------- Bra.inno.3 1250 ------------------------cau-uag-uUGCGUGCUAUACGACCC Bra.inno.3 1300 GAAGC-CAA-GUGA-UCUACCUAUGAG|CAGUGCGAAACUCGAG(UAAC) Bra.inno.3 1350 AU-CGAAUGGaGGUGCGAACC--AGUGGC(-CGUGAAAA)GGCUU|UGG- Bra.inno.3 1400 AUGAC-UUGUGGGUAGGAGU(-GAAAG)GCUAAUCAAACUUGGAGAUAGC Bra.inno.3 1450 UGGUUCUCUCCGAAAUGUCU(-UUAG)GGGCAGC|-GUUAUGUGU---U| Bra.inno.3 1500 -UAC|UUACGG|GGGUAG|AGC-ACUAA-AUGGACUA-GG|-GCUCC(ua Bra.inno.3 1550 acc)-GAGUACCAAACCCAA-CUAAACUCCGAA-UA-|CCG-U-A-A--- Bra.inno.3 1600 GUUA---AG|AGCAUGGCAGUUAGAC--AGC-GGCG(GAUAAG)CGUCAU Bra.inno.3 1650 -UGUC-AAAAGGG(-AAACAG-)CCCAGAUCCUCAGCUAAG-GU|CCCA- Bra.inno.3 1700 AAA-UCUAUG-U-UAA-GUG------GGAAAGGAUGUG-AGAAUACUUA- Bra.inno.3 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUUCCU|U(UAA)A|GAG Bra.inno.3 1800 UGC(GUAACA)GC|UCACUGGU-----CGAGU-GUUCCU--UGC|GCCGA Bra.inno.3 1850 AAAU-GUAA-CGGGGCUCAAACAUA-G|U|ACCGAAGCU|AGGG|aauua Bra.inno.3 1900 uaga---(guuaa------------------------------------- Bra.inno.3 1950 -------------------------------------------------- Bra.inno.3 2000 -------------------------------------------------- Bra.inno.3 2050 -------------------------------------------------- Bra.inno.3 2100 -------------------------------------------------- Bra.inno.3 2150 -----------------------------------)----ucuauaauu- Bra.inno.3 2200 GG-UAGGAGAG|-----CGUU-CUU-UAA--------------------- Bra.inno.3 2250 -------------------------------------------------- Bra.inno.3 2300 --------------------------------G-CCGU-UGAAGGUU-U- Bra.inno.3 2350 A-CC(-GUAA-)GGU--GGGCUGG|AGGUAU-AAGAAGUGAGGAUGC-AG Bra.inno.3 2400 GC|AUG-AGUA--ACGAGAAAACGGG(UGAGAAA)CCCGUU|CGCC-GCA Bra.inno.3 2450 AACCCAAGGUUUCCUA-GGUAAAG-(CUAAU)CU|G-CCUAGGGUUAGU| Bra.inno.3 2500 CGA|C-CCCUAAGAUGAGGCU(GAAA)-A-GCGU-AGUCGAUGG-GAAAC Bra.inno.3 2550 AGG-(UA-AAUAUU)C-CUGU|AC|ua-u-ga-uau-guu---------- Bra.inno.3 2600 -------------------------------------------------- Bra.inno.3 2650 -------------------------------------------------- Bra.inno.3 2700 ------ucgau------ggaa--uga-cacagauuguuu-gcgu-a-|cg Bra.inno.3 2750 c-guu(ag--auuggu-agau-)aa-cguc-|aaac-------------- Bra.inno.3 2800 ---aguu--uagac-------uuguga-uga-gu(aa-aa-u-)gc|u-- Bra.inno.3 2850 uguugcuuuaa---------gguu-ga-ggcuggauag|uga-|------ Bra.inno.3 2900 ----cugggcu(-uucg--)gguucag---------gaag-uugcgu--g Bra.inno.3 2950 agcu-agg-|cugucgagaaauaauuuu-uaagguu----------aggc Bra.inno.3 3000 -auguc--aua|A|UUGUACCGCAAACC(GACACA)GG|UGG-GUGAGA- Bra.inno.3 3050 U-(GAGUA)UUUUAAGGCGC||UCGAGAUAAUUUUCCCU----------- Bra.inno.3 3100 ----AAGGAACUUUGCAAAUUAGUUUUGUAAA(-UUCG)GAAAAAGAGAC Bra.inno.3 3150 |GCUUGAau--uuuggu----------agca(-auau-)ugagag----- Bra.inno.3 3200 ------------GAGAG-U|U(GCA)GUGAAAAGGCC-UGGC|CGACU-- Bra.inno.3 3250 ---GU(UUAACAAAA)ACACAGAUUUUUG|CAAACAU(GUAA------)A Bra.inno.3 3300 UGGAUGU-AUAGGGAUUGA-CACCUGCCCAGU|GCUG-GAA-GGUUAAAA Bra.inno.3 3350 GGAGAGGUUAGC--------(G-UAA)-----------GCGA-AGCUUCG Bra.inno.3 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( Bra.inno.3 3450 UAA)GGUAGCGaGAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Bra.inno.3 3500 AUGGUGUAACGA-UCCGGGCACUGUCUCGGGGAAGAACUCG|GUGAAAUU Bra.inno.3 3550 |GAAUUAU-CAG(UGAAGAUG)CUGAUUACCCGCAAC-AGGACGGUAAGA Bra.inno.3 3600 CCCCGUGA|ACCU-UUACUAU|AACUUGACAUU|GAGUUUUGUUUUGUGA Bra.inno.3 3650 UGUGUAGAAUAGAUGGGAGGCUUUGAAG--UGGGAGC(GCCA)GCuUUCA Bra.inno.3 3700 UGGAGCCAUC-U-UUGAAAUACCAUC|CUUC-GCAAAAUGGGA-UUCUAA Bra.inno.3 3750 -CGA-UUA---GCCG(--UU-AUC)-CGGCAGUCG-GACAUUGUCAGGCG Bra.inno.3 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG Bra.inno.3 3850 C|G|U|GCAAAGGUCACC|UCAAACCGA(AUAGAAA)UCGGUAGUA-GA| Bra.inno.3 3900 GU(A|UAAAG)GCAUAAGGUGGCUUGACUGCGAGAG(AGACAU)CUCGAG Bra.inno.3 3950 CAGGUAC(GAAA)GU-AGGU|CUUAGUGAUCCGGUGGUCCCG(AGUGGA) Bra.inno.3 4000 AGG|GCCAUCGCUAAAC|GGACAAAAGGUACUC|CGGG|GAUAACAG|GC Bra.inno.3 4050 UUA--UCUCCCCCAAGA(G-UUC-AUA)UCGACGGGG-AGGU-UUGGCAC Bra.inno.3 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU Bra.inno.3 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGCUGG Bra.inno.3 4200 GUUCA-A~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ Bra.inno.3 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ Bra.inno.3 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ Bra.inno.3 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ Bra.inno.3 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ Bra.inno.3 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ Bra.inno.3 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.inno.3 4750 ~~~|||||| Bra.pilosi 0 -------------------------------------------------- Bra.pilosi 50 ----------------------------|~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ Bra.pilosi 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ Bra.pilosi 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ Bra.pilosi 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ Bra.pilosi 500 ~~~~~~~~~~~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ Bra.pilosi 550 ~~~~~~~~~UAAUC(-AAAAUU)GAGAU|UCC-CUCAGUAGU(GGCGA)G Bra.pilosi 600 CGA-AAG-GGGA-AGA-GCCUAAAccguaa-uaaugucaa--guu(guaa Bra.pilosi 650 -)---ggc-guuguuauugcgguguuguagggcggcga-----------g Bra.pilosi 700 ugg(--uaua-c)uuacauau------aucgacuuugcuauauaugau-a Bra.pilosi 750 gugGAAc-uguuu(u-ggaaa)a-gcaggc|c(aua)guGGG(UGAUAGC Bra.pilosi 800 )CCUGU-Acac-gaaaucauauaua-caagguu----------------- Bra.pilosi 850 ---uugucgu-uccu---GAGUAGGGCGGGG(CACGUG-AAA)CCCUGUU Bra.pilosi 900 UGAAUCU-GGG-UA(GACCAC)UA-UCC-AAGGCAAA----AUACUAACC Bra.pilosi 950 AGUGACCAAUAGUG-UA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Bra.pilosi 1000 UCUCCC(GUUGA-)GGGUU--AUUAAA-UAGAACCUGAAACCUU-AAGCU Bra.pilosi 1050 UACAA-G-UAGUCAGAGGGA-ACc-cug--cua-----(--gcaauag-) Bra.pilosi 1100 --------uag--aag-gccUGAUGGCGUGCCU(UUU-GUAG|A)AUGA| Bra.pilosi 1150 -GCCUGCGACUUAU-AGUA-UGUAGC-AAGAUUAAGAGG(UAAUAG)CCU Bra.pilosi 1200 U-GUAGUCGUAGU(GAAA-)GCGAGCCU(UAA-UA)GGGCGA-------- Bra.pilosi 1250 ------------------------aau-uag-uUGCAUGCUAUACGACCC Bra.pilosi 1300 GAAGC-CAA-GUGA-UCUACCUAUGAG|CAGCGCGAAACUCGAG(UAAC) Bra.pilosi 1350 AU-UGAGUGGaGGUGCGAACC--AGUGGC(-CGUGAAAA)GGCUU|UGG- Bra.pilosi 1400 AUGAC-UUGUGGGUAGGAGU(-GAAAG)GCUAAUCAAACUUGGAGAUAGC Bra.pilosi 1450 UGGUUCUCUCCGAAAUGUCU(-UUAG)GGGCAGC|-GUUAUGUGU---U| Bra.pilosi 1500 -UAC|UUGCGG|GGGUAG|AGC-ACUAA-AUGGACUA-GG|-GCUCC(ua Bra.pilosi 1550 acC)-GAGUACCAAACCCAA-CUAAACUCCGAA-UA-|CCG-U-A-A--- Bra.pilosi 1600 GUUA---AG|AGCAUGGCAGUUAGAC--AGC-GGCG(GAUAAG)CGUCAU Bra.pilosi 1650 -UGUC-AAAAGGG(-AAACAG-)CCCAGAUCCUCAGCUAAG-GU|CCCA- Bra.pilosi 1700 AAA-UCUAUG-U-UAA-GUG------GGAAAGGAUGUG-AGAAUACUUA- Bra.pilosi 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUUCCU|U(UAA)A|GAG Bra.pilosi 1800 UGC(GUAACA)GC|UCACUGGU-----CGAGU-GUU-UU--UGC|GCCGA Bra.pilosi 1850 AAAU-GUAA-CGGGGCUCAAACAUA-G|U|ACCGAAGCU|AGGG|aauua Bra.pilosi 1900 uaga---(guuaa------------------------------------- Bra.pilosi 1950 -------------------------------------------------- Bra.pilosi 2000 -------------------------------------------------- Bra.pilosi 2050 -------------------------------------------------- Bra.pilosi 2100 -------------------------------------------------- Bra.pilosi 2150 -----------------------------------)----ucuaugauu- Bra.pilosi 2200 GG-UAGGAGAG|-----CGUU-CUU-UAA--------------------- Bra.pilosi 2250 -------------------------------------------------- Bra.pilosi 2300 --------------------------------G-CCGU-UGAAGGUG-U- Bra.pilosi 2350 A-UC(-GUAA-)GGU--AUGCUGG|AGGUAU-AAGAAGUGAGGAUGC-AG Bra.pilosi 2400 GC|AUG-AGUA--ACGAGAAAACGGG(UGCGAAA)CCCGUU|CGCC-GCA Bra.pilosi 2450 AACCCAAGGUUUCCUA-GGUAAAG-(CUAAU)CU|G-CCUAGGGUUAGU| Bra.pilosi 2500 CGA|C-CCCUAAGAUGAGGCU(GAAA)-A-GCGU-AGUCGAUGG-GAAAC Bra.pilosi 2550 AGG-(UA-AAUAUU)C-CUGU|AC|ua-u-ag-uau-guu---------- Bra.pilosi 2600 -------------------------------------------------- Bra.pilosi 2650 -------------------------------------------------- Bra.pilosi 2700 ------ucgau------ggaa--uga-cacagauuguuu-gcgu-a-|cg Bra.pilosi 2750 c-gag(gu--gauggu-uauc-)cu-cguc-|gaau-------------- Bra.pilosi 2800 ---agcc--gagac-------uugugg-uga-gu(aa-aa-u-)gc|u-- Bra.pilosi 2850 ugcugcuuuaa---------gguu-ga-ggugg-auag|uga-|------ Bra.pilosi 2900 ----cugggcu(-uucg--)gguucag---------gaag-uugcgu--g Bra.pilosi 2950 aauu-agg-|cuguuuagaaauaauucc-uaagguu----------aggc Bra.pilosi 3000 -auauu--aua|A|UUGUACCGCAAACC(GACACA)GG|UGG-GUGAGA- Bra.pilosi 3050 U-(GAGUA)UUUUAAGGCGC||UCGAGAUAAUUUUCCCU----------- Bra.pilosi 3100 ----AAGGAACUUUGCAAAUUAGUUUUGUAAA(-UUCG)GAAAAAGAGAC Bra.pilosi 3150 |GCUUGAau--uucggu----------agca(-auau-)cgggag----- Bra.pilosi 3200 ------------GAGAG-U|U(GCA)GUGAAAAGGCC-UGGC|CGACU-- Bra.pilosi 3250 ---GU(UUAACAAAA)ACACAGAUUUUUG|CAAACAU(GUAA------)A Bra.pilosi 3300 UGGAUGU-AUAGGGAUUGA-CACCUGCCCAGU|GCUG-GAA-GGUUAAAA Bra.pilosi 3350 GGAGAGGUUAGC--------(G-UAA)-----------GCGA-AGCUUCG Bra.pilosi 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( Bra.pilosi 3450 UAA)GGUAGCGaAAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Bra.pilosi 3500 AUGGUGUAACGA-UCCGGGCACUGUCUCGGGGAAGAACUCG|GUGAAAUU Bra.pilosi 3550 |GAAUUAU-CAG(UGAAGAUG)CUGAUUACCCGCAAC-AGGACGGAGAGA Bra.pilosi 3600 CCCCGUGA|ACCU-UUACUAU|AACUUGACAUU|GAGUUUUGUUUUGUGA Bra.pilosi 3650 UGUGUAGAAUAGAUGGGAGGCUUUGAAG--UGGGAGC(GCCA)GCUUUCA Bra.pilosi 3700 UGGAGCCAUC-G-UUGAAAUACCAUC|CUUC-GCAAAAUGGGA-UUCUAA Bra.pilosi 3750 -CGA-UUA---GCCG(--UU-AUC)-CGGCAGUCG-GACAUUGUCAGGCG Bra.pilosi 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG Bra.pilosi 3850 C|G|U|GCAAAGGUCACC|UCAAACCGA(AUAGAAA)UCGGUAGUA-GA| Bra.pilosi 3900 GU(A|UAAAG)GCAUAAGGUGGCUUAACUGCGAGAG(AGACAU)CUCGAG Bra.pilosi 3950 CAGGUGC(GAAA)GC-AGGU|CUUAGUGAUCCGGUGGUCCCG(AGUGGA) Bra.pilosi 4000 AGG|GCCAUCGCUAAAC|GGACAAAAGGUACUC|CGGG|GAUAACAG|GC Bra.pilosi 4050 UUA--UCUCCCCCAAGA(G-UUC-AUA)UCGACGGGG-AGGU-UUGGCAC Bra.pilosi 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU Bra.pilosi 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-CGAGCUGG Bra.pilosi 4200 GUUCA-A~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ Bra.pilosi 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ Bra.pilosi 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ Bra.pilosi 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ Bra.pilosi 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ Bra.pilosi 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ Bra.pilosi 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Bra.pilosi 4750 ~~~|||||| T.pallid.A 0 -------------------------------------------------- T.pallid.A 50 ----------------------------|---------GGUCAAGCGAA- T.pallid.A 100 --UAGUGGUUUACGGUGGAUG|UCUUGG|AGUUGUC|AG|GC-GAUGAAG T.pallid.A 150 GU|CGUG(AUAA-GC-)U|-GCG-AAAAGCCUCGGG|-GAGGA(G-CA-C T.pallid.A 200 AUG-)UCCUGUG-AUC-CGGGGAUG|ACCGAAUGGG(GUAA)CCC|GACA T.pallid.A 250 GGG-(--------------------------------------------- T.pallid.A 300 -------------------------------------------------- T.pallid.A 350 -------------------------------------------------- T.pallid.A 400 -------------------------------------------------- T.pallid.A 450 ---uaaag)-CCUUGUC-AUUG-CCUUCC(ugaaugaauag-)GGA-GGG T.pallid.A 500 -U-A--AGG-CGAAAC|UG-GGUGAACU|GA(ACCA)UCUAAGUA-ACUU T.pallid.A 550 G-GGAAAAGAAAUC(-AAGA--)GAGAU|UCC-GAAAGUAGU(GGCGA)G T.pallid.A 600 CGA-AAU-UGGA-GGA-GCCUAAAccugu----------------(gucu T.pallid.A 650 a)---------------acagggguuguagggccgcg-----------cg T.pallid.A 700 ggc(--uugc--)guucg-------gugggugaaauaauccggccuau-a T.pallid.A 750 gcaGAAa-ggu-u(uugggaa)a-gccuga|c(aga)gaGGG(UGAAAUC T.pallid.A 800 )CCCGU-Augc-ggaauggggcgga-----------ccugcugg------ T.pallid.A 850 ----ugcggu-aCCU---GAGUACGGCGGGA(CACGAG-GAA)UCCUGUC T.pallid.A 900 GGAAUCU-GGG-UC(GACCAC)GA-UCU-AAGGCUAA----AUACUCGAC T.pallid.A 950 AACUACCGAUAGUG-GAC-AAGUACC(GUGA)-GGGA-AAGAUGAAAA-G T.pallid.A 1000 AACCCC(GGUGA-)GGGGA--GUGAAA-UAGAACCUGAAACCGU-AAACC T.pallid.A 1050 AACAA-G-AUGUUACAGCCU------------------(----guga--) T.pallid.A 1100 -----------------GGGUGGUAGCGUGCCU(UUU-GUAG|A)AUGA| T.pallid.A 1150 -GCCUGCGAGUUAC-GGUG-UGCAGC-AAGGUUAAGGGA(UAGGAG)UCC T.pallid.A 1200 U-GGAGCCGGAGG(GAAA-)CCGAGUCU(UAA-AA)GGGCGu-------- T.pallid.A 1250 ------------------------ggu-gaG-UUGUACGUCGUA-GACCC T.pallid.A 1300 GAAGC-CAGGGUGA-UCUAGUUAUGAG|CAGGUUGAAACAGGGG(UGAA) T.pallid.A 1350 GC-CUUGUGGAGGACCGAACU-AUAAUCU(-GUUAAAAA)AGGUA|UGG- T.pallid.A 1400 AUGAC-UUGUGACUAGGAGU(-GAAAG)GCUAAACAAACCUGGAGAUAGC T.pallid.A 1450 UGGUUCUCCCCGAAAUGCCU(-UUAG)GGACAGC|-CUUAUACa----A| T.pallid.A 1500 -AAC|UGUCGG|AGGUAA|AGC-ACUGG-AUGGGCUA-GG|-GGGUU(uc T.pallid.A 1550 au-)CGCCUACCAAACCCAA-UCAAACUCUGAA-UG-|CCG-G-C-A--- T.pallid.A 1600 GUCA---AC|GUG-UGGGAGUGAGAC--UGC-GUGC(GACAAG)GUUCGU T.pallid.A 1650 -AGUC-GAGAGGG(-AAACAG-)CCCAGACCGUCAGCUAAG-GU|CCCG- T.pallid.A 1700 AAA-U-ACCG-CUUGA-GUG------UGAAAUGAAGUG-UGGGUACCUG- T.pallid.A 1750 GACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUUCCU|U(GAA)A|GAG T.pallid.A 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-ACG-CA--UGC|GCAGA T.pallid.A 1850 UAAU-GUAU-CGGGGCU-AAGCGGU-A|U|ACCGAAGCU|ACGG|gucuu T.pallid.A 1900 gcauu--(uuu--------------------------------------- T.pallid.A 1950 -------------------------------------------------- T.pallid.A 2000 -------------------------------------------------- T.pallid.A 2050 -------------------------------------------------- T.pallid.A 2100 -------------------------------------------------- T.pallid.A 2150 -----------------------------------)---ggugcaaggc- T.pallid.A 2200 GG-UAGGGGAG|-----CAUU-CCA-UGU--------------------- T.pallid.A 2250 -------------------------------------------------- T.pallid.A 2300 --------------------------------A-CUGA-UGAAGGAA-Ua T.pallid.A 2350 U-CC(-GGGA-)GGA--GUUCUGG|AGGGGA-UGGAAGAGAGAAUGC-AG T.pallid.A 2400 GU|AUA-AGUAC-ACGAAAAGGAGGG(UGAGAUU)CCUUCC|CGCC-GAA T.pallid.A 2450 AACCUAAGGUUUCCUG-GGUGAAG-(GUCAU)CU|G-CUCAGGGUAAGU| T.pallid.A 2500 CGG|C-CCCUAAGGCGAGGAC(GAGG)-G-UCGU-AGUCGAUGG-GAAUC T.pallid.A 2550 CGG-(UU-UAUAUU)C-CGGA|AC|cu-c-uu-gca-auu---------- T.pallid.A 2600 -------------------------------------------------- T.pallid.A 2650 -------------------------------------------------- T.pallid.A 2700 ------ucgau------ggca--gga-cgcgugaggugaagccc-g-|gc T.pallid.A 2750 c-aaa(ga--uuggua-gu---)uu-ugguc|uaa--------------- T.pallid.A 2800 ---guauccgagccguuuua--agagc-gauagg(ca-aa-u-)cc|g-- T.pallid.A 2850 ucguucga-------------ggu-aaggugcg-agug|cga-|------ T.pallid.A 2900 ----cuggagc(-gauga-)gcgaagg---------gaag--caggu-gu T.pallid.A 2950 aguc-aug-|gcgacgggaaauacuguc-uaagguu----------aggu T.pallid.A 3000 -ugcaa--gag|A|CCGUACCGCAAACC(GACACA)GG|UAG-GUAGGA- T.pallid.A 3050 U-(GAGUA)AUCUAAGGCGC||UCGAGAGAACUCGCGUC----------- T.pallid.A 3100 ----AAGGAACUCGGCAAAAUACACACGUAAC(-CUCG)GGAGAAGUGUG T.pallid.A 3150 |ACCCUU---------------------gcc(-uuu--)ggu-------- T.pallid.A 3200 ------------GAGGG-U|G(GCA)GAAAGCAGGUC-CAGG|CGACU-- T.pallid.A 3250 ---GU(UUAUCAAAA)ACAUAGCCAUCUG|CAAAUCA(GUAA------)U T.pallid.A 3300 GAGACGU-AUAGGUGGUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA T.pallid.A 3350 GGAGAGGUUCGUG-------(G-UAA)----------CACAA-CGCUUUG T.pallid.A 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( T.pallid.A 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA T.pallid.A 3500 AUGGUGUAACGAcUCUGGACACUGUCUCGACGCGAGACUCG|GUGAAAUU T.pallid.A 3550 |UAUGUAC-CGG(UAAAGAAG)CCGGUUACCCAUAGU-UAGACGGAAAGA T.pallid.A 3600 CCCCGUGA|ACCU-UCACCGU|AGCUUACUAUU|GGAACUUGGUUUACCA T.pallid.A 3650 UGUGUAGUAUAGGUGGGAGACAGAGAAG--CUUGGCC(GUCA)GGUUAGG T.pallid.A 3700 CGGAGUCAAC-A-GUGAAAUACCACC|CUUG-GUACGUCAGGU-UUCUAA T.pallid.A 3750 -CCU-UUG---GCCG(-ugg-AUC)-CGGCAAAGG-GACCGUGGUAGGUG T.pallid.A 3800 GG-CGGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AAGGUAAC)GGAGG T.pallid.A 3850 U|G|C|GCGAAGGUCUCC|UCACACCGG(UUGGAAA)UCGGUGCGC-GA| T.pallid.A 3900 GU(G|UAAAG)GCACAAGGAGGCUUAACUGCGAGAC(CGACAG)GUCGAG T.pallid.A 3950 CAGAUAC(GAAA)GU-AGGU|CUUAGUGAUCUGGCGGUAGCG(UGUGGA) T.pallid.A 4000 AGC|GCCGUCACUUAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC T.pallid.A 4050 UGA--UUUUCCCCAAGA(G-UUC-ACA)UCGACGGGA-AAGU-UUGGCAC T.pallid.A 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GAAGC---A)-GGU T.pallid.A 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-UGAGCUGG T.pallid.A 4200 GUUCA-GAAC|GUC(GCGA)-GACAGUU-CGGU-CCCUAU-CU|GCUAUG T.pallid.A 4250 G-G|CG-UUGGAUAUGU|GA-|GAGGAGC-UGC--------------UUU T.pallid.A 4300 (UAGUAC(GAGA)GGACC)GAAGUGG|ACGAACCUCUGGUGUACCAGU|U T.pallid.A 4350 AUCCU(GC-CA-)AGGGUACGUGCUGGGUAGCU-AUGUUCGGAAGGGAUA T.pallid.A 4400 ACCGCU(GAAGGCAUCUA)AGUGGGAAGCCCGCCUC|AAGAUUACAUAUC T.pallid.A 4450 C|CU|gaagg-(--uuga)-ccuuc-CUG-AAGA|-CU|CCUUG-(CACA T.pallid.A 4500 CU-A)CAAGG-UCGAUAG|GCUGG|AGGUC-UACGUACC--(GUAA-)-- T.pallid.A 4550 GGUAU|UA-AGCCG|A|CCAGUACUAAUA-AGUCGUGAG|GCUUGA-CCA T.pallid.A 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.pallid.A 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.pallid.A 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.pallid.A 4750 ~~~|||||| T.pallid.B 0 -------------------------------------------------- T.pallid.B 50 ----------------------------|---------GGUCAAGCGAA- T.pallid.B 100 --UAGUGGUUUACGGUGGAUG|UCUUGG|AGUUGUC|AG|GC-GAUGAAG T.pallid.B 150 GU|CGUG(AUAA-GC-)U|-GCG-AAAAGCCUCGGG|-GAGGA(G-CA-C T.pallid.B 200 AUG-)UCCUGUG-AUC-CGGGGAUG|ACCGAAUGGG(GUAA)CCC|GACA T.pallid.B 250 GGG-(--------------------------------------------- T.pallid.B 300 -------------------------------------------------- T.pallid.B 350 -------------------------------------------------- T.pallid.B 400 -------------------------------------------------- T.pallid.B 450 ---uaaag)-CCUUGUC-AUUG-CCUUCC(ugaaugaauag-)GGA-GGG T.pallid.B 500 -U-A--AGG-CGAAAC|UG-GGUGAACU|GA(ACCA)UCUAAGUA-ACUU T.pallid.B 550 G-GGAAAAGAAAUC(-AAGA--)GAGAU|UCC-GAAAGUAGU(GGCGA)G T.pallid.B 600 CGA-AAU-UGGA-GGA-GCCUAAAccugu----------------(gucu T.pallid.B 650 a)---------------acagggguuguagggccgcg-----------cg T.pallid.B 700 ggc(--uugc--)guucg-------gugggugaaauaauccggccuau-a T.pallid.B 750 gcaGAAa-ggu-u(uugggaa)a-gccuga|c(aga)gaGGG(UGAAAUC T.pallid.B 800 )CCCGU-Augc-ggaauggggcgga-----------ccugcugg------ T.pallid.B 850 ----ugcggu-aCCU---GAGUACGGCGGGA(CACGAG-GAA)UCCUGUC T.pallid.B 900 GGAAUCU-GGG-UC(GACCAC)GA-UCU-AAGGCUAA----AUACUCGAC T.pallid.B 950 AACUACCGAUAGUG-GAC-AAGUACC(GUGA)-GGGA-AAGAUGAAAA-G T.pallid.B 1000 AACCCC(GGUGA-)GGGGA--GUGAAA-UAGAACCUGAAACCGU-AAACC T.pallid.B 1050 AACAA-G-AUGUUACAGCCU------------------(----guga--) T.pallid.B 1100 -----------------GGGUGGUAGCGUGCCU(UUU-GUAG|A)AUGA| T.pallid.B 1150 -GCCUGCGAGUUAC-GGUG-UGCAGC-AAGGUUAAGGGA(UAGGAG)UCC T.pallid.B 1200 U-GGAGCCGGAGG(GAAA-)CCGAGUCU(UAA-AA)GGGCGu-------- T.pallid.B 1250 ------------------------ggu-gaG-UUGUACGUCGUA-GACCC T.pallid.B 1300 GAAGC-CAGGGUGA-UCUAGUUAUGAG|CAGGUUGAAACAGGGG(UGAA) T.pallid.B 1350 GC-CUUGUGGAGGACCGAACU-AUAAUCU(-GUUAAAAA)AGGUA|UGG- T.pallid.B 1400 AUGAC-UUGUGACUAGGAGU(-GAAAG)GCUAAACAAACCUGGAGAUAGC T.pallid.B 1450 UGGUUCUCCCCGAAAUGCCU(-UUAG)GGACAGC|-CUUAUACa----A| T.pallid.B 1500 -AAC|UGUCGG|AGGUAA|AGC-ACUGG-AUGGGCUA-GG|-GGGUU(uc T.pallid.B 1550 au-)CGCCUACCAAACCCAA-UCAAACUCUGAA-UG-|CCG-G-C-A--- T.pallid.B 1600 GUCA---AC|GUG-UGGGAGUGAGAC--UGC-GUGC(GACAAG)GUUCGU T.pallid.B 1650 -AGUC-GAGAGGG(-AAACAG-)CCCAGACCGUCAGCUAAG-GU|CCCG- T.pallid.B 1700 AAA-U-ACCG-CUUGA-GUG------UGAAAUGAAGUG-UGGGUACCUG- T.pallid.B 1750 GACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUUCCU|U(GAA)A|GAG T.pallid.B 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-ACG-CA--UGC|GCAGA T.pallid.B 1850 UAAU-GUAU-CGGGGCU-AAGCGGU-A|U|ACCGAAGCU|ACGG|gucuu T.pallid.B 1900 gcauu--(uuu--------------------------------------- T.pallid.B 1950 -------------------------------------------------- T.pallid.B 2000 -------------------------------------------------- T.pallid.B 2050 -------------------------------------------------- T.pallid.B 2100 -------------------------------------------------- T.pallid.B 2150 -----------------------------------)---ggugcaaggc- T.pallid.B 2200 GG-UAGGGGAG|-----CAUU-CCA-UGU--------------------- T.pallid.B 2250 -------------------------------------------------- T.pallid.B 2300 --------------------------------A-CUGA-UGAAGGAA-Ua T.pallid.B 2350 U-CC(-GGGA-)GGA--GUUCUGG|AGGGGA-UGGAAGAGAGAAUGC-AG T.pallid.B 2400 GU|AUA-AGUAC-ACGAAAAGGAGGG(UGAGAUU)CCUUCC|CGCC-GAA T.pallid.B 2450 AACCUAAGGUUUCCUG-GGUGAAG-(GUCAU)CU|G-CUCAGGGUAAGU| T.pallid.B 2500 CGG|C-CCCUAAGGCGAGGAC(GAGG)-G-UCGU-AGUCGAUGG-GAAUC T.pallid.B 2550 CGG-(UU-UAUAUU)C-CGGA|AC|cu-c-uu-gca-auu---------- T.pallid.B 2600 -------------------------------------------------- T.pallid.B 2650 -------------------------------------------------- T.pallid.B 2700 ------ucgau------ggca--gga-cgcgugaggugaagccc-g-|gc T.pallid.B 2750 c-aaa(ga--uuggua-gu---)uu-ugguc|uaa--------------- T.pallid.B 2800 ---guauccgagccguuuua--agagc-gauagg(ca-aa-u-)cc|g-- T.pallid.B 2850 ucguucga-------------ggu-aaggugcg-agug|cga-|------ T.pallid.B 2900 ----cuggagc(-gauga-)gcgaagg---------gaag--caggu-gu T.pallid.B 2950 aguc-aug-|gcgacgggaaauacuguc-uaagguu----------aggu T.pallid.B 3000 -ugcaa--gag|A|CCGUACCGCAAACC(GACACA)GG|UAG-GUAGGA- T.pallid.B 3050 U-(GAGUA)AUCUAAGGCGC||UCGAGAGAACUCGCGUC----------- T.pallid.B 3100 ----AAGGAACUCGGCAAAAUACACACGUAAC(-CUCG)GGAGAAGUGUG T.pallid.B 3150 |ACCCUU---------------------gcc(-uuu--)ggu-------- T.pallid.B 3200 ------------GAGGG-U|G(GCA)GAAAGCAGGUC-CAGG|CGACU-- T.pallid.B 3250 ---GU(UUAUCAAAA)ACAUAGCCAUCUG|CAAAUCA(GUAA------)U T.pallid.B 3300 GAGACGU-AUAGGUGGUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA T.pallid.B 3350 GGAGAGGUUCGUG-------(G-UAA)----------CACAA-CGCUUUG T.pallid.B 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( T.pallid.B 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA T.pallid.B 3500 AUGGUGUAACGAcUCUGGACACUGUCUCGACGCGAGACUCG|GUGAAAUU T.pallid.B 3550 |UAUGUAC-CGG(UAAAGAAG)CCGGUUACCCAUAGU-UAGACGGAAAGA T.pallid.B 3600 CCCCGUGA|ACCU-UCACCGU|AGCUUACUAUU|GGAACUUGGUUUACCA T.pallid.B 3650 UGUGUAGUAUAGGUGGGAGACAGAGAAG--CUUGGCC(GUCA)GGUUAGG T.pallid.B 3700 CGGAGUCAAC-A-GUGAAAUACCACC|CUUG-GUACGUCAGGU-UUCUAA T.pallid.B 3750 -CCU-UUG---GCCG(-ugg-AUC)-CGGCAAAGG-GACCGUGGUAGGUG T.pallid.B 3800 GG-CGGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AAGGUAAC)GGAGG T.pallid.B 3850 U|G|C|GCGAAGGUCUCC|UCACACCGG(UUGGAAA)UCGGUGCGC-GA| T.pallid.B 3900 GU(G|UAAAG)GCACAAGGAGGCUUAACUGCGAGAC(CGACAG)GUCGAG T.pallid.B 3950 CAGAUAC(GAAA)GU-AGGU|CUUAGUGAUCUGGCGGUAGCG(UGUGGA) T.pallid.B 4000 AGC|GCCGUCACUUAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC T.pallid.B 4050 UGA--UUUUCCCCAAGA(G-UUC-ACA)UCGACGGGA-AAGU-UUGGCAC T.pallid.B 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GAAGC---A)-GGU T.pallid.B 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-UGAGCUGG T.pallid.B 4200 GUUCA-GAAC|GUC(GCGA)-GACAGUU-CGGU-CCCUAU-CU|GCUAUG T.pallid.B 4250 G-G|CG-UUGGAUAUGU|GA-|GAGGAGC-UGC--------------UUU T.pallid.B 4300 (UAGUAC(GAGA)GGACC)GAAGUGG|ACGAACCUCUGGUGUACCAGU|U T.pallid.B 4350 AUCCU(GC-CA-)AGGGUACGUGCUGGGUAGCU-AUGUUCGGAAGGGAUA T.pallid.B 4400 ACCGCU(GAAGGCAUCUA)AGUGGGAAGCCCGCCUC|AAGAUUACAUAUC T.pallid.B 4450 C|CU|gaagg-(--uuga)-ccuuc-CUG-AAGA|-CU|CCUUG-(CACA T.pallid.B 4500 CU-A)CAAGG-UCGAUAG|GCUGG|AGGUC-UACGUACC--(GUAA-)-- T.pallid.B 4550 GGUAU|UA-AGCCG|A|CCAGUACUAAUA-AGUCGUGAG|GCUUGA-CCA T.pallid.B 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.pallid.B 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.pallid.B 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.pallid.B 4750 ~~~|||||| B.burgdo.1 0 -------------------------------------------------- B.burgdo.1 50 ----------------------------|---------GGUCAAAGUAA- B.burgdo.1 100 --UAAGAGUCUAUGGUGAAUG|CCUAGG|AGCUUUA|AG|GC-GAAGAAG B.burgdo.1 150 GU|CGUG(GUAA-GC-)U|-GCG-AAAAGCUUGGGG|-GAGAA(G-CA-A B.burgdo.1 200 ACA-)UUUAUUG-AUC-CCAAGAUU|ACCGAAUGGA(GUAA)UCC|AGCU B.burgdo.1 250 AGC-(--------------------------------------------- B.burgdo.1 300 -------------------------------------------------- B.burgdo.1 350 -------------------------------------------------- B.burgdo.1 400 -------------------------------------------------- B.burgdo.1 450 ---aagau)-GCUAGCU-AUCU-AUUAU-(----uuaa----)-AU-AAU B.burgdo.1 500 -A-G--AGG-CGAUAC|CAGGGGGAAGU|GA(ACCA)UCUAAGUA-CCCU B.burgdo.1 550 GAGGAAAAGAAAUC(-AAG---)GAGAU|UCC-CUUAGUAGU(GGCGA)G B.burgdo.1 600 CGA-AAA-GGGA-GUA-GCCCAAAcuuuaa-augugucaa--gcu(gcag B.burgdo.1 650 -)---agc-guugcauuuaugggguuguaggacguuuag---------gc B.burgdo.1 700 uua(gucuguaa)uaagcaaaaa------aguuacaaaauauuuauau-a B.burgdo.1 750 gaaGAAu-aau-c(u-ggaaa)g-uuuaac|c(aaa)gaAGG(UGAUAGU B.burgdo.1 800 )CCUGU-Aauu-uaaauguaaauaucuuuuua------------------ B.burgdo.1 850 ----aaaugu-uccu---GAGUAGGACGAGG(CACGAG-AAA)CCUUGUU B.burgdo.1 900 UGAAGCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGAA B.burgdo.1 950 AGCUACCGAUAGAG-AA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.burgdo.1 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAA-CUGAAACCGU-AGACU B.burgdo.1 1050 UACAA-G-CAGUCAAAGCCG-uaa--------------(----uuua--) B.burgdo.1 1100 -------------uug-CGGUGAUGGCGUGCCU(UUU-GCAU|A)AUGA| B.burgdo.1 1150 -ACCUGCGAGUUAU-CAUG-UCUAGC-AAGAUUAAAGCA(UAGAAG)UGC B.burgdo.1 1200 U-GGAGUCGAAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGA-------- B.burgdo.1 1250 -------------------------uu-uaG-UUAGAUGUGGUA-GACCC B.burgdo.1 1300 GAAGC-CGA-GUGA-UCUAUUUAUGGC|CAGGCUGAAGCUUGGG(UAAA) B.burgdo.1 1350 AC-CAAGUGGAGGGCCGAACU-CUAGUCU(-GUUUAAAA)AGGCA|GGG- B.burgdo.1 1400 AUGAG-CUGUGAAUAGGAGU(-GAAAG)GCUAAACAAACUCGGAGAUAGC B.burgdo.1 1450 UGGUUCUCCCCGAAAUGGAU(-UUAA)GUUCAGC|-CUUAUUUu----A| B.burgdo.1 1500 -GUU|UAAUAG|AGGUAG|AGC-ACUAA-UUGAGCUA-GG|-GCCUG(uc B.burgdo.1 1550 aa-)AGGGUACCAAACUCAG-UUAAACUCCGAA-UG-|CUA-U-U-A--- B.burgdo.1 1600 AAUG---AU|GAA-UAGGAGUGAGAC--UAU-GGGC(GAUAAG)GUUCAU B.burgdo.1 1650 -AGUC-GAGAGGG(-AAACAA-)CCCAGACCAACAGCUAAG-GU|CUCA- B.burgdo.1 1700 AAA-A-UGUG-U-UAA-GUG------GAAAAGGAGGUU-UAGGUACGUA- B.burgdo.1 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUACCU|U(UAA)A|GAG B.burgdo.1 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-ACU-UA--AGC|GCCGA B.burgdo.1 1850 UAAU-GUAA-CGGGGCU-AAACACA-U|U|ACCGAAGCU|UUGG|aucuu B.burgdo.1 1900 aac----(gaaa-------------------------------------- B.burgdo.1 1950 -------------------------------------------------- B.burgdo.1 2000 -------------------------------------------------- B.burgdo.1 2050 -------------------------------------------------- B.burgdo.1 2100 -------------------------------------------------- B.burgdo.1 2150 -----------------------------------)-----guuaagau- B.burgdo.1 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- B.burgdo.1 2250 -------------------------------------------------- B.burgdo.1 2300 --------------------------------G-CCAG-AGAAGUUA-A- B.burgdo.1 2350 A-CU(-GGAA-)AGU--UUGAUGG|AGGUAU-CAGAAGUGAGAAUGC-AG B.burgdo.1 2400 GU|AUG-AGUA--ACGAAAAAAUGGG(UGAGAUU)CCCAUU|CGCC-GAA B.burgdo.1 2450 AACCUAAGGUUUCCUG-GGUAAAG-(GUCGU)CU|U-CCCAGG-UUAGU| B.burgdo.1 2500 CGG|U-CCCUAAGGCAAAGCU(GAAA)-A-GUGU-AGUCGAUGG-GAAAC B.burgdo.1 2550 GGG-(UU-AAUAUU)C-CCGU|AC|cu-c-uu-aua-guu---------- B.burgdo.1 2600 -------------------------------------------------- B.burgdo.1 2650 -------------------------------------------------- B.burgdo.1 2700 ------ucgau------ggag--uga-cgcaugagguuaacuac-u-|gc B.burgdo.1 2750 u-agg(cg--augguu-gu---)cc-uagu-|uuaa-------------- B.burgdo.1 2800 ---gcau-uaaggugaug----aucuu-gauagg(aa-aa-u-)cc|g-- B.burgdo.1 2850 uuaagaga-------------gcu-aagaugug-auga|uga-|------ B.burgdo.1 2900 ----gugcuau(-uuag--)guagcau---------gaaa--uguag-gu B.burgdo.1 2950 aguc-aag-|gugccaagaaauagcuuc-uaagguu----------aggc B.burgdo.1 3000 -uauaa--ggg|A|CCGUACCGCAAACC(GACACA)GG|UAG-GUGGGA- B.burgdo.1 3050 U-(GAAAA)UUCUAAGGCGC||GCGAGAGAAUCCACGUU----------- B.burgdo.1 3100 ----AAGGAACUCUGCAAAAUACGUACGUAAC(-UUCG)GGAUAAGUACG B.burgdo.1 3150 |ACCUAA------------------------(-gcaa-)----------- B.burgdo.1 3200 ------------UUAGG-U|A(GCA)UAAAAAUGGUC-CAAA|CGACU-- B.burgdo.1 3250 ---GU(UUACCAAAA)ACACAGGUCUCUG|CAAAUCU(GUAA------)A B.burgdo.1 3300 GAGAAGU-AUAGGGACUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA B.burgdo.1 3350 GGAGAUGUUAGU--------(U-UAU)-----------GCG--AACGUUG B.burgdo.1 3400 AAUUU-AG-C|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.burgdo.1 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA B.burgdo.1 3500 AUGGUGUAACGA-UUUGGACGCUGUCUCAACGUGGAGCUCG|GUGAAAUU B.burgdo.1 3550 |GAAGUAU-CGG(UGAAGAUG)CCGAUUACUUGUGGU-UAGACGGAAAGA B.burgdo.1 3600 -UCCGUGA|ACCUUUUACUAU|AGCUUGGUAUU|GAGAUUUGAUUAAAUA B.burgdo.1 3650 UGUGUAGGAUAGGUGGGAGACUUUGAAG--CUAUCUC(GUCA)GGGGUAG B.burgdo.1 3700 UGGAGUCAAU-C-UUGAAAUACCACC|CUUG-UUUAAUUAGGU-UUCUAA B.burgdo.1 3750 -CUU-AUA-------(---G-AAA)----UAUGAG-GAGAGUGCCAGGUG B.burgdo.1 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG B.burgdo.1 3850 U|G|C|GCAAAGGUUACC|UUAGAGUGG(UUGGAAA)UCACUCUGU-AA| B.burgdo.1 3900 GU(G|UAAAG)GCAUAAGGUAGCUUAACUGUAAGAC(UGACAA)GUCGAA B.burgdo.1 3950 CAGAUAC(GAAA)GU-AGGU|CUUAGUGAUCUGGCGGUGGCA(AGUGGA) B.burgdo.1 4000 AGC|GCCGUCACUUAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC B.burgdo.1 4050 UUA--UCCUUCCCAAGA(G-UUC-ACA)UCGACGGAA-GGGU-UUGGCAC B.burgdo.1 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UAGGGCU(GGAGC---A)-GGU B.burgdo.1 4150 CCUAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-CGAGCUGG B.burgdo.1 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCACA B.burgdo.1 4250 A-G|CG-UUGGAUAUUU|GA-|GAGGAGC-UAU--------------CUU B.burgdo.1 4300 (UAGUAC(GAGA)GGACC)GAGAUGG|ACGAACCUCUAGUGUACCAGU|U B.burgdo.1 4350 AUCCU(GC-CA-)AGGGUAAGUGCUGGGUAGCU-ACGUUCGGAAAGGAUA B.burgdo.1 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCUUCCUC|AAGAUGAGAUAUC B.burgdo.1 4450 C|UU|------(------)--------UA--AGG|-GU|CCUGG-(AAGA B.burgdo.1 4500 AU-A)CCAGG-UUGAUAG|GUUAG|AAGUG-UAAGUAUA--(GCAA-)-- B.burgdo.1 4550 UAUAU|UA-AGCUG|A|CUAAUACUAAUU-ACCCGU-AU|CUUUGG-CCA B.burgdo.1 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.1 4750 ~~~|||||| B.burgdo.2 0 -------------------------------------------------- B.burgdo.2 50 ----------------------------|---------GGUCAAAGUAA- B.burgdo.2 100 --UAAGAGUCUAUGGUGAAUG|CCUAGG|AGCUUUA|AG|GC-GAAGAAG B.burgdo.2 150 GU|CGUG(GUAA-GC-)U|-GCG-AAAAGCUUGGGG|-GAGAA(G-CA-A B.burgdo.2 200 ACA-)UUUAUUG-AUC-CCAAGAUU|ACCGAAUGGA(GUAA)UCC|AGCU B.burgdo.2 250 AGC-(--------------------------------------------- B.burgdo.2 300 -------------------------------------------------- B.burgdo.2 350 -------------------------------------------------- B.burgdo.2 400 -------------------------------------------------- B.burgdo.2 450 ---aagau)-GCUAGCU-AUCU-AUUAU-(----uuaa----)-AU-AAU B.burgdo.2 500 -A-G--AGG-CGAUAC|CAGGGGGAAGU|GA(ACCA)UCUAAGUA-CCCU B.burgdo.2 550 GAGGAAAAGAAAUC(-AAG---)GAGAU|UCC-CUUAGUAGU(GGCGA)G B.burgdo.2 600 CGA-AAA-GGGA-GUA-GCCCAAAcuuuaa-augugucaa--gcu(gcag B.burgdo.2 650 -)---agc-guugcauuuaugggguuguaggacguuuag---------gc B.burgdo.2 700 uua(gucuguaa)uaagcaaaaa------aguuacaaaauauuuauau-a B.burgdo.2 750 gaaGAAu-aau-c(u-ggaaa)g-uuuaac|c(aaa)gaAGG(UGAUAGU B.burgdo.2 800 )CCUGU-Aauu-uaaauguaaauaucuuuuua------------------ B.burgdo.2 850 ----aaaugu-uccu---GAGUAGGACGAGG(CACGAG-AAA)CCUUGUU B.burgdo.2 900 UGAAGCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGAA B.burgdo.2 950 AGCUACCGAUAGAG-AA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.burgdo.2 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAA-CUGAAACCGU-AGACU B.burgdo.2 1050 UACAA-G-CAGUCAAAGCCG-uaa--------------(----uuua--) B.burgdo.2 1100 -------------uug-CGGUGAUGGCGUGCCU(UUU-GCAU|A)AUGA| B.burgdo.2 1150 -ACCUGCGAGUUAU-CAUG-UCUAGC-AAGAUUAAAGCA(UAGAAG)UGC B.burgdo.2 1200 U-GGAGUCGAAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGA-------- B.burgdo.2 1250 -------------------------uu-uaG-UUAGAUGUGGUA-GACCC B.burgdo.2 1300 GAAGC-CGA-GUGA-UCUAUUUAUGGC|CAGGCUGAAGCUUGGG(UAAA) B.burgdo.2 1350 AC-CAAGUGGAGGGCCGAACU-CUAGUCU(-GUUUAAAA)AGGCA|GGG- B.burgdo.2 1400 AUGAG-CUGUGAAUAGGAGU(-GAAAG)GCUAAACAAACUCGGAGAUAGC B.burgdo.2 1450 UGGUUCUCCCCGAAAUGGAU(-UUAA)GUUCAGC|-CUUAUUUu----A| B.burgdo.2 1500 -GUU|UAAUAG|AGGUAG|AGC-ACUAA-UUGAGCUA-GG|-GCCUG(uc B.burgdo.2 1550 aa-)AGGGUACCAAACUCAG-UUAAACUCCGAA-UG-|CUA-U-U-A--- B.burgdo.2 1600 AAUG---AU|GAA-UAGGAGUGAGAC--UAU-GGGC(GAUAAG)GUUCAU B.burgdo.2 1650 -AGUC-GAGAGGG(-AAACAA-)CCCAGACCAACAGCUAAG-GU|CUCA- B.burgdo.2 1700 AAA-A-UGUG-U-UAA-GUG------GAAAAGGAGGUU-UAGGUACGUA- B.burgdo.2 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUACCU|U(UAA)A|GAG B.burgdo.2 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-ACU-UA--AGC|GCCGA B.burgdo.2 1850 UAAU-GUAA-CGGGGCU-AAACACA-U|U|ACCGAAGCU|UUGG|aucuu B.burgdo.2 1900 aac----(gaaa-------------------------------------- B.burgdo.2 1950 -------------------------------------------------- B.burgdo.2 2000 -------------------------------------------------- B.burgdo.2 2050 -------------------------------------------------- B.burgdo.2 2100 -------------------------------------------------- B.burgdo.2 2150 -----------------------------------)-----guuaagau- B.burgdo.2 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- B.burgdo.2 2250 -------------------------------------------------- B.burgdo.2 2300 --------------------------------G-CCAG-AGAAGUUA-A- B.burgdo.2 2350 A-CU(-GGAA-)AGU--UUGAUGG|AGGUAU-CAGAAGUGAGAAUGC-AG B.burgdo.2 2400 GU|AUG-AGUA--ACGAAAAAAUGGG(UGAGAUU)CCCAUU|CGCC-GAA B.burgdo.2 2450 AACCUAAGGUUUCCUG-GGUAAAG-(GUCGU)CU|U-CCCAGG-UUAGU| B.burgdo.2 2500 CGG|U-CCCUAAGGCAAAGCU(GAAA)-A-GUGU-AGUCGAUGG-GAAAC B.burgdo.2 2550 GGG-(UU-AAUAUU)C-CCGU|AC|cu-c-uu-aua-guu---------- B.burgdo.2 2600 -------------------------------------------------- B.burgdo.2 2650 -------------------------------------------------- B.burgdo.2 2700 ------ucgau------ggag--uga-cgcaugagguuaacuac-u-|gc B.burgdo.2 2750 u-agg(cg--augguu-gu---)cc-uagu-|uuaa-------------- B.burgdo.2 2800 ---gcau-uaaggugaug----aucuu-gauagg(aa-aa-u-)cc|g-- B.burgdo.2 2850 uuaagaga-------------gcu-aagaugug-auga|uga-|------ B.burgdo.2 2900 ----gugcuau(-uuag--)guagcau---------gaaa--uguag-gu B.burgdo.2 2950 aguc-aag-|gugccaagaaauagcuuc-uaagguu----------aggc B.burgdo.2 3000 -uauaa--ggg|A|CCGUACCGCAAACC(GACACA)GG|UAG-GUGGGA- B.burgdo.2 3050 U-(GAAAA)UUCUAAGGCGC||GCGAGAGAAUCCACGUU----------- B.burgdo.2 3100 ----AAGGAACUCUGCAAAAUACGUACGUAAC(-UUCG)GGAUAAGUACG B.burgdo.2 3150 |ACCUAA------------------------(-gcaa-)----------- B.burgdo.2 3200 ------------UUAGG-U|A(GCA)UAAAAAUGGUC-CAAA|CGACU-- B.burgdo.2 3250 ---GU(UUACCAAAA)ACACAGGUCUCUG|CAAAUCU(GUAA------)A B.burgdo.2 3300 GAGAAGU-AUAGGGACUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA B.burgdo.2 3350 GGAGAUGUUAGU--------(U-UAU)-----------GCG--AACGUUG B.burgdo.2 3400 AAUUU-AG-C|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.burgdo.2 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA B.burgdo.2 3500 AUGGUGUAACGA-UUUGGACGCUGUCUCAACGUGGAGCUCG|GUGAAAUU B.burgdo.2 3550 |GAAGUAU-CGG(UGAAGAUG)CCGAUUACUUGUGGU-UAGACGGAAAGA B.burgdo.2 3600 -UCCGUGA|ACCUUUUACUAU|AGCUUGGUAUU|GAGAUUUGAUUAAAUA B.burgdo.2 3650 UGUGUAGGAUAGGUGGGAGACUUUGAAG--CUAUCUC(GUCA)GGGGUAG B.burgdo.2 3700 UGGAGUCAAU-C-UUGAAAUACCACC|CUUG-UUUAAUUAGGU-UUCUAA B.burgdo.2 3750 -CUU-AUA-------(---G-AAA)----UAUGAG-GAGAGUGCCAGGUG B.burgdo.2 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG B.burgdo.2 3850 U|G|C|GCAAAGGUUACC|UUAGAGUGG(UUGGAAA)UCACUCUGU-AA| B.burgdo.2 3900 GU(G|UAAAG)GCAUAAGGUAGCUUAACUGUAAGAC(UGACAA)GUCGAA B.burgdo.2 3950 CAGAUAC(GAAA)GU-AGGU|CUUAGUGAUCUGGCGGUGGCA(AGUGGA) B.burgdo.2 4000 AGC|GCCGUCACUUAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC B.burgdo.2 4050 UUA--UCCUUCCCAAGA(G-UUC-ACA)UCGACGGAA-GGGU-UUGGCAC B.burgdo.2 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UAGGGCU(GGAGC---A)-GGU B.burgdo.2 4150 CCUAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-CGAGCUGG B.burgdo.2 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCACA B.burgdo.2 4250 A-G|CG-UUGGAUAUUU|GA-|GAGGAGC-UAU--------------CUU B.burgdo.2 4300 (UAGUAC(GAGA)GGACC)GAGAUGG|ACGAACCUCUAGUGUACCAGU|U B.burgdo.2 4350 AUCCU(GC-CA-)AGGGUAAGUGCUGGGUAGCU-ACGUUCGGAAAGGAUA B.burgdo.2 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCUUCCUC|AAGAUGAGAUAUC B.burgdo.2 4450 C|UU|------(------)--------UA--AGG|-GU|CCUGG-(AAGA B.burgdo.2 4500 AU-A)CCAGG-UUGAUAG|GUUAG|AAGUG-UAAGUAUA--(GCAA-)-- B.burgdo.2 4550 UAUAU|UA-AGCUG|A|CUAAUACUAAUU-ACCCGU-AU|CUUUGG-CCA B.burgdo.2 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.2 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.2 4750 ~~~|||||| B.burgdo.3 0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ B.burgdo.3 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ B.burgdo.3 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ B.burgdo.3 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ B.burgdo.3 500 ~~~~~~~~~~~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ B.burgdo.3 550 ~~~~~~~~~~~~~~(~~~~~~~)~~~~~|~~~~~~~~~~~~~(~~~~~)~ B.burgdo.3 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~ B.burgdo.3 650 ~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~(~~~~~~~ B.burgdo.3 800 )~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~ B.burgdo.3 900 ~~~~~~~~~~~~~~(~~~~~~)~~-~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~ B.burgdo.3 1000 ~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~) B.burgdo.3 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| B.burgdo.3 1150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~ B.burgdo.3 1200 ~~~~~~~~~~~~~(~~~~~)~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~ B.burgdo.3 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 1300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~(~~~~) B.burgdo.3 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~|~~~~ B.burgdo.3 1400 ~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|~~~~~~~~~~~~~~| B.burgdo.3 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~~~~~~(~~ B.burgdo.3 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~ B.burgdo.3 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ B.burgdo.3 1650 ~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ B.burgdo.3 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ B.burgdo.3 1800 ~~~(~~~~~~)~~|*<~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~ B.burgdo.3 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~|~|~~~~AAGCU|UUGG|aucuu B.burgdo.3 1900 aac----(gaaa-------------------------------------- B.burgdo.3 1950 -------------------------------------------------- B.burgdo.3 2000 -------------------------------------------------- B.burgdo.3 2050 -------------------------------------------------- B.burgdo.3 2100 -------------------------------------------------- B.burgdo.3 2150 -----------------------------------)-----guuaagau- B.burgdo.3 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- B.burgdo.3 2250 -------------------------------------------------- B.burgdo.3 2300 --------------------------------G-CCAG-AGAAGUUA-A- B.burgdo.3 2350 A-CU(-GGAA-)AGU--UUGAUGG|AGGUAU-CAGAAGUGAGAAUGC-AG B.burgdo.3 2400 GU|AUG-AGUA--ACGAAAAAAUGGG(UGAGAUU)CCCAUU|CGCC-GAA B.burgdo.3 2450 AACCUAAGGUUUCCUG-GGUAAAG-(GUCGU)CU|U-CCCAGGGUUAGU| B.burgdo.3 2500 CGG|C-CCCUAAGGCAAAGCU(GAAA)-A-GUGU-AGUCGAUGG-GAAAC B.burgdo.3 2550 GGG-(UU-AAUAUU)C-CCGU|AC|cu-c-uu-aua-guu---------- B.burgdo.3 2600 -------------------------------------------------- B.burgdo.3 2650 -------------------------------------------------- B.burgdo.3 2700 ------ucgau------ggag--uga-cgcaugagguuaacuac-u-|gc B.burgdo.3 2750 u-agg(cg--augguu-gu---)cc-uagu-|uuaa-------------- B.burgdo.3 2800 ---gcau-uaaggcgaug----aucuu-aauagg(aa-aa-u-)cc|g-- B.burgdo.3 2850 uuaagaga-------------gcu-aagaugug-auga|uga-|------ B.burgdo.3 2900 ----gugcuau(-uuag--)guagcau---------gaaa--uguag-gu B.burgdo.3 2950 aguc-aag-|gugccaagaaauagcuuc-uaagguu----------aggc B.burgdo.3 3000 -uauaa--ggg|A|CCGUACCGCAAACC(GACACA)GG|UAG-GUGGGA- B.burgdo.3 3050 U-(GAAAA)UUCUAAGGCGC||GCGAGAGAAUCCACGUU----------- B.burgdo.3 3100 ----AAGGAACUCUGCAAAAUACGUACGUAAC(-UUCG)GGAUAAGUACG B.burgdo.3 3150 |ACCUAA------------------------(-gcaa-)----------- B.burgdo.3 3200 ------------UUAGG-U|A(GCA)UAAAAAUGGUC-CAAA|CGACU-- B.burgdo.3 3250 ---GU(UUACCAAAA)ACACAGGUCUCUG|CAAAUCU(GUAA------)A B.burgdo.3 3300 GAGAAGU-AUAGGGACUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA B.burgdo.3 3350 GGAGAUGUUAGU--------(U-UAU)-----------GCGA-AGCAUUG B.burgdo.3 3400 AAUUUAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.burgdo.3 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA B.burgdo.3 3500 AUGGUGUAACGA-UUUGGACGCUGUCUCAACGUGGAGCUCG|GUGAAAUU B.burgdo.3 3550 |GAAGUAU-CGG(UGAAGAUG)CCGAUUACUUGUGGU-UAGACGGAAAGA B.burgdo.3 3600 CCCCGUGA|ACCU-UUACUAU|AGCUUGGUAUU|GAGAUUUGAUUAAAUA B.burgdo.3 3650 UGUGUAGGAUAGGUGGGAGACUUUGAAG--CUAUCUC(GUCA)GGGGUAG B.burgdo.3 3700 UGGAGUCAAU-c-UUGAAAUACCACC|CUUG-UUUAAUUAGGU-UUCUAA B.burgdo.3 3750 -CUU-AUA-------(---G-AAA)----UAUGAG-GAGAGUGCCAGGUG B.burgdo.3 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG B.burgdo.3 3850 U|G|C|GCAAAGGUUACC|UUAGAGUGG(UUGGAAA)UCACUCUGU-AA| B.burgdo.3 3900 GU(G|UAAAG)GCAUAAGGUAGCUUAACUGUAAGAC(UGACAA)GUCGAA B.burgdo.3 3950 CAGAUAC(GAAA)GU-AGGU|CUUAGUGAUCUG-CGGUGGCA(AGUGGA) B.burgdo.3 4000 AGC|GCCGUCACUUAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC B.burgdo.3 4050 UUA--UCCUUCCCAAGA(G-UUC-ACA)UCGACGGAA-GGGU-UUGGCAC B.burgdo.3 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UAGGGCU(GGAGC---A)-GGU B.burgdo.3 4150 CCUAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-CGAGCUGG B.burgdo.3 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCACA B.burgdo.3 4250 A-G|CG-UUGGAUAUUU|GA-|GAGGAGC-UAU--------------CUU B.burgdo.3 4300 (UAGUAC(GAGA)GGACC)GAGAUGG|ACGAACCUCUAGUGUACCAGU|U B.burgdo.3 4350 AUCCU(GC-CA-)AGGGUAAGUGCUGGGUAGCU-ACGUUCGGAAAGGAUA B.burgdo.3 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCUUCCUC|AAGAUGAGAUAUC B.burgdo.3 4450 C|UU|------(------)--------UA--AGG|-GU|CCUGG-(AAGA B.burgdo.3 4500 AU-A)CCAGG-UCGAUAG|GUUAG|AAGUG-UAAGUAUA--(GCAA-)-- B.burgdo.3 4550 UAUAU|UA-AGCUG|A|CUAAUACUAAUU-ACCCGU-AU|CUUUGG-CCA B.burgdo.3 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.3 4750 ~~~|||||| B.burgdo.4 0 -------------------------------------------------- B.burgdo.4 50 ----------------------------|-----auauGGUCAAAGUAA- B.burgdo.4 100 --UAAGAGUCUAUGGUGAAUG|CCUAGG|AGCUUUA|AG|GC-GAAGAAG B.burgdo.4 150 GU|CGUG(GUAA-GC-)U|-GCG-AAAAGCUUGGGG|-GAGAA(G-CA-A B.burgdo.4 200 ACA-)UUUAUUG-AUC-CCAAGAUU|ACCGAAUGGA(GUAA)UCC|AGCU B.burgdo.4 250 AGC-(--------------------------------------------- B.burgdo.4 300 -------------------------------------------------- B.burgdo.4 350 -------------------------------------------------- B.burgdo.4 400 -------------------------------------------------- B.burgdo.4 450 ---aagau)-GCUAGCU-AUCU-AUUAU-(----uuaa----)-AU-AAU B.burgdo.4 500 -A-G--AGG-CGAUAC|CA-GGGGAAGU|GA(ACCA)UCUAAGUA-CCCU B.burgdo.4 550 GAGGAAAAGAAAUC(-AAA---)GAGAU|UCC-CUUAGUAGU(GGCGA)G B.burgdo.4 600 CGA-AAA-GGGA-GUA-GCCCAAAcuuuaa-augugucaa--gcu(gcag B.burgdo.4 650 -)---agc-guugcauuuaugggguuguaggacguuuag---------gc B.burgdo.4 700 uua(gucuguaa)uaagcaaaaa------aguuacaaaauauuuauau-a B.burgdo.4 750 gaaGAAu-aau-c(u-ggaaa)g-uuuaac|c(aaa)gaAGG(UGAUAGU B.burgdo.4 800 )CCUGU-Aauu-uaaauguaaauaucuuuuua------------------ B.burgdo.4 850 ----aaaugu-uccu---GAGUAGGACGAGG(CACGAG-AAA)CCUUGUU B.burgdo.4 900 UGAAGCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGAA B.burgdo.4 950 AGCUACCGAUAGAG-AA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.burgdo.4 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAA-CUGAAACCGU-AGACU B.burgdo.4 1050 UACAA-G-CAGUCAAAGCCG-uaa--------------(----uuua--) B.burgdo.4 1100 -------------uug-CGGUGAUGGCGUGCCU(UUU-GCAU|A)AUGA| B.burgdo.4 1150 -ACCUGCGAGUUAU-CAUG-UCUAGC-AAGAUUAAAGCA(UAGAAG)UGC B.burgdo.4 1200 U-GGAGUCGAAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGA-------- B.burgdo.4 1250 -------------------------uu-uaG-UUAGAUGUGGUA-GACCC B.burgdo.4 1300 GAAGC-CGA-GUGA-UCUAUUUAUGGC|CAGGCUGAAGCUUGGG(UAAA) B.burgdo.4 1350 AC-CAAGUGGAGGGCCGAACU-CUAGUCU(-GUUUAAAA)AGGCA|GGG- B.burgdo.4 1400 AUGAG-CUGUGAAUAGGAGU(-GAAAG)GCUAAACAAACUCGGAGAUAGC B.burgdo.4 1450 UGGUUCUCCCCGAAAUGGAU(-UUAA)GUUCAGC|-CUUAUUUu----A| B.burgdo.4 1500 -GUU|UAAUAG|AGGUAG|AGC-ACUAA-UUGAGCUA-GG|-GCCUG(uc B.burgdo.4 1550 aa-)AGGGUACCAAACUCAG-UUAAACUCCGAA-UG-|CUA-U-U-A--- B.burgdo.4 1600 AAUG---AU|GAA-UAGGAGUGAGAC--UAU-GGGC(GAUAAG)GUUCAU B.burgdo.4 1650 -AGUC-GAGAGGG(-AAACAA-)CCCAGACCAACAGCUAAG-GU|CUCA- B.burgdo.4 1700 AAA-A-UGUG-U-UAA-GUG------GAAAAGGAGGUU-UAGGUACGUA- B.burgdo.4 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUACCU|U(UAA)A|GAG B.burgdo.4 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-ACU-UA--AGC|GCCGA B.burgdo.4 1850 UAAU-GUAA-CGGGGCU-AAACACA-U|U|ACCGAAGCU|UUGG|aucuu B.burgdo.4 1900 aac----(gaaa-------------------------------------- B.burgdo.4 1950 -------------------------------------------------- B.burgdo.4 2000 -------------------------------------------------- B.burgdo.4 2050 -------------------------------------------------- B.burgdo.4 2100 -------------------------------------------------- B.burgdo.4 2150 -----------------------------------)-----guuaagau- B.burgdo.4 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- B.burgdo.4 2250 -------------------------------------------------- B.burgdo.4 2300 --------------------------------G-CCAG-AGAAGUUA-A- B.burgdo.4 2350 G-CU(-GGAA-)AGU--UUGAUGG|AGGUAU-CAGAAGUGAGAAUGC-AG B.burgdo.4 2400 GU|AUG-AGUA--ACGAAAAAAUGGG(UGAGAUU)CCCAUU|CGCC-GAA B.burgdo.4 2450 AACCUAAGGUUUCCUG-GGUAAAG-(GUCGU)CU|U-CCCAGGGUUAGU| B.burgdo.4 2500 CGG|C-CCCUAAGGCAAAGCU(GAAA)-A-GUGU-AGUCGAUGG-GAAAC B.burgdo.4 2550 GGG-(UU-AAUAUU)C-CCGU|AC|cu-c-uu-aua-guu---------- B.burgdo.4 2600 -------------------------------------------------- B.burgdo.4 2650 -------------------------------------------------- B.burgdo.4 2700 ------ucgau------ggag--uga-cgcaugagguuaacuac-u-|gc B.burgdo.4 2750 u-agg(cg--augguu-gu---)cc-uagu-|uuaa-------------- B.burgdo.4 2800 ---gcau-uaaggcgaug----aucuu-aauagg(aa-aa-u-)cc|g-- B.burgdo.4 2850 uuaagaga-------------gcu-aagaugug-auga|uga-|------ B.burgdo.4 2900 ----gugcuau(-uuag--)guagcau---------gaaa--uguag-gu B.burgdo.4 2950 aguc-aag-|gugccaagaaauagcuuc-uaagguu----------aggc B.burgdo.4 3000 -uauaa--ggg|A|CCGUACCGCAAACC(GACACA)GG|UAG-GUGGGA- B.burgdo.4 3050 U-(GAAAA)UUCUAAGGCGC||GCGAGAGAAUCCACGUU----------- B.burgdo.4 3100 ----AAGGAACUCUGCAAAAUACGUACGUAAC(-UUCG)GGAUAAGUACG B.burgdo.4 3150 |ACCUAA------------------------(-gcaa-)----------- B.burgdo.4 3200 ------------UUAGG-U|A(GCA)UAAAAAUGGUC-CAAA|CGACU-- B.burgdo.4 3250 ---GU(UUACCAAAA)ACACAGGUCUCUG|CAAAUCU(GUAA------)A B.burgdo.4 3300 GAGAAGU-AUAGGGACUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA B.burgdo.4 3350 GGAGAUGUUAGU--------(U-UAU)-----------GCGA-AGCAUUG B.burgdo.4 3400 AAUUUAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.burgdo.4 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA B.burgdo.4 3500 AUGGUGUAACGA-UUUGGACGCUGUCUCAACGUGGAGCUCG|GUGAAAUU B.burgdo.4 3550 |GAAGUAU-CGG(UGAAGAUG)CCGAUUACUUGUGGU-UAGACGGAAAGA B.burgdo.4 3600 CCCCGUGA|ACCU-UUACUAU|AGCUUGGUAUU|GAGAUUUGAUUAAAUA B.burgdo.4 3650 UGUGUAGGAUAGGUGGGAGACUUUGAAG--CUAUCUC(GUCA)GGGGUAG B.burgdo.4 3700 UGGAGUCAAU-C-UUGAAAUACCACC|CUUG-UUUAAUUAGGU-UUCUAA B.burgdo.4 3750 -CUU-AUA-------(---G-AAA)----UAUGAG-GAGAGUGCCAGGUG B.burgdo.4 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG B.burgdo.4 3850 U|G|C|GCAAAGGUUACC|UUAGAGUGG(UUGGAAA)UCACUCUGU-AA| B.burgdo.4 3900 GU(G|UAAAG)GCAUAAGGUAGCUUAACUGUAAGAC(UGACAA)GUCGAA B.burgdo.4 3950 CAGAUAC(GAAA)GU-AGGU|CUUAGUGAUCUGGCGGUGGCA(AGUGGA) B.burgdo.4 4000 AGC|GCCGUCACUUAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC B.burgdo.4 4050 UUA--UCCUUCCCAAGA(G-UUC-ACA)UCGACGGAA-GGGU-UUGGCAC B.burgdo.4 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UAGGGCU(GGAGC---A)-GGU B.burgdo.4 4150 CCUAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-CGAGCUGG B.burgdo.4 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCACA B.burgdo.4 4250 A-G|CG-UUGGAUAUUU|GA-|GAGGAGC-UAU--------------CUU B.burgdo.4 4300 (UAGUAC(GAGA)GGACC)GAGAUGG|ACGAACCUCUAGUGUGCCAGU|U B.burgdo.4 4350 AUCCU(GC-CA-)AGGGUAAGUGCUGGGUAGCU-ACGUUCGGAAAGGAUA B.burgdo.4 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCUUCCUC|AAGAUGAGAUAUC B.burgdo.4 4450 C|UU|------(------)--------UA--AGG|-GU|CCUGG-(AAGA B.burgdo.4 4500 AU-A)CCAGG-UUGAUAG|GUUAG|AAGUG-UAAGUAUA--(GCAA-)-- B.burgdo.4 4550 UAUAU|UA-AGCUG|A|CUAAUACUAAUU-ACCCGU-AU|CUUUGG-CCA B.burgdo.4 4600 UA------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.4 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.4 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.4 4750 ~~~|||||| B.burgdo.5 0 -------------------------------------------------- B.burgdo.5 50 ----------------------------|---------GGUCAAAGUAA- B.burgdo.5 100 --UAAGAGUCUAUGGUGAAUG|CCUAGG|AGCUUUA|AG|GC-GAAGAAG B.burgdo.5 150 GU|CGUG(GUAA-GC-)U|-GCG-AAAAGCUUGGGG|-GAGAA(G-CA-A B.burgdo.5 200 ACA-)UUUAUUG-AUC-CCAAGAUU|ACCGAAUGGA(GUAA)UCC|AGCU B.burgdo.5 250 AGC-(--------------------------------------------- B.burgdo.5 300 -------------------------------------------------- B.burgdo.5 350 -------------------------------------------------- B.burgdo.5 400 -------------------------------------------------- B.burgdo.5 450 ---aagau)-GCUAGCU-AUCU-AUUAU-(----uuaa----)-AU-AAU B.burgdo.5 500 -A-G--AGG-CGAUAC|CA-GGGGAAGU|GA(ACCA)UCUAAGUA-CCCU B.burgdo.5 550 GAGGAAAAGAAAUC(-AAA---)GAGAU|UCC-CUUAGUAGU(GGCGA)G B.burgdo.5 600 CGA-AAA-GGGA-GUA-GCCCAAAcuuuaa-augugucaa--gcu(gcag B.burgdo.5 650 -)---agc-guugcauuuaugggguuguaggacguuuag---------gc B.burgdo.5 700 uua(gucuguaa)uaagcaaaaa------aguuacaaaauauuuauau-a B.burgdo.5 750 gaaGAAu-aau-c(u-ggaaa)g-uuuaac|c(aaa)gaAGG(UGAUAGU B.burgdo.5 800 )CCUGU-Aauu-uaaauguaaauaucuuuuua------------------ B.burgdo.5 850 ----aaaugu-uccu---GAGUAGGACGAGG(CACGAG-AAA)CCUUGUU B.burgdo.5 900 UGAAGCU-GGG-GA(GACCAC)UC-UCC-AAGGCUAA----AUACUAGAA B.burgdo.5 950 AGCUACCGAUAGAG-AA--GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.burgdo.5 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAA-CUGAAACCGU-AGACU B.burgdo.5 1050 UACAA-G-CAGUCAAAGCCG-uaa--------------(----uuua--) B.burgdo.5 1100 -------------uug-CGGUGAUGGCGUGCCU(UUU-GCAU|A)AUGA| B.burgdo.5 1150 -ACCUGCGAGUUAU-CAUG-UCUAGC-AAGAUUAAAGCA(UAGAAG)UGC B.burgdo.5 1200 U-GGAGUCGAAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGA-------- B.burgdo.5 1250 -------------------------uu-uaG-UUAGAUGUGGUA-GACCC B.burgdo.5 1300 GAAGC-CGA-GUGA-UCUAUUUAUGGC|CAGGCUGAAGCUUGGG(UAAA) B.burgdo.5 1350 AC-CAAGUGGAGGGCCGAACU-CUAGUCU(-GUUUAAAA)AGGCA|GGG- B.burgdo.5 1400 AUGAG-CUGUGAAUAGGAGU(-GAAAG)GCUAAACAAACUCGGAGAUAGC B.burgdo.5 1450 UGGUUCUCCCCGAAAUGGAU(-UUAA)GUUCAGC|-CUUAUUUu----A| B.burgdo.5 1500 -GUU|UAAUAG|AGGUAG|AGC-ACUAA-UUGAGCUA-GG|-GCCUG(uc B.burgdo.5 1550 aa-)AGGGUACCAAACUCAG-UUAAACUCCGAA-UG-|CUA-U-U-A--- B.burgdo.5 1600 AAUG---AU|GAA-UAGGAGUGAGAC--UAU-GGGC(GAUAAG)GUUCAU B.burgdo.5 1650 -AGUC-GAGAGGG(-AAACAA-)CCCAGACCAACAGCUAAG-GU|CUCA- B.burgdo.5 1700 AAA-A-UGUG-U-UAA-GUG------GAAAAGGAGGUU-UAGGUACGUA- B.burgdo.5 1750 AACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAUACCU|U(UAA)A|GAG B.burgdo.5 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-ACU-UA--AGC|GCCGA B.burgdo.5 1850 UAAU-GUAA-CGGGGCU-AAACACA-U|U|ACCGAAGCU|UUGG|aucuu B.burgdo.5 1900 aac----(gaaa-------------------------------------- B.burgdo.5 1950 -------------------------------------------------- B.burgdo.5 2000 -------------------------------------------------- B.burgdo.5 2050 -------------------------------------------------- B.burgdo.5 2100 -------------------------------------------------- B.burgdo.5 2150 -----------------------------------)-----guuaagau- B.burgdo.5 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- B.burgdo.5 2250 -------------------------------------------------- B.burgdo.5 2300 --------------------------------G-CCAG-AGAAGUUA-A- B.burgdo.5 2350 A-CU(-GGAA-)AGU--UUGAUGG|AGGUAU-CAGAAGUGAGAAUGC-AG B.burgdo.5 2400 GU|AUG-AGUA--ACGAAAAAAUGGG(UGAGAUU)CCCAUU|CGCC-GAA B.burgdo.5 2450 AACCUAAGGUUUCCUG-GGUAAAG-(GUCGU)CU|U-CCCAGGGUUAGU| B.burgdo.5 2500 CGG|C-CCCUAAGGCAAAGCU(GAAA)-A-GUGU-AGUCGAUGG-GAAAC B.burgdo.5 2550 GGG-(UU-AAUAUU)C-CCGU|AC|cu-c-uu-aua-guu---------- B.burgdo.5 2600 -------------------------------------------------- B.burgdo.5 2650 -------------------------------------------------- B.burgdo.5 2700 ------ucgau------ggag--uga-cgcaugagguuaacuac-u-|gc B.burgdo.5 2750 u-agg(cg--augguu-gu---)cc-uagu-|uuaa-------------- B.burgdo.5 2800 ---gcau-uaaggcgaug----aucuu-aauagg(aa-aa-u-)cc|g-- B.burgdo.5 2850 uuaagaga-------------gcu-aagaugug-auga|uga-|------ B.burgdo.5 2900 ----gugcuau(-uuag--)guagcau---------gaaa--uguag-gu B.burgdo.5 2950 aguc-aag-|gugccaagaaauagcuuc-uaagguu----------aggc B.burgdo.5 3000 -uauaa--ggg|A|CCGUACCGCAAACC(GACACA)GG|UAG-GUGGGA- B.burgdo.5 3050 U-(GAAAA)UUCUAAGGCGC||GCGAGAGAAUCCACGUU----------- B.burgdo.5 3100 ----AAGGAACUCUGCAAAAUACGUACGUAAC(-UUCG)GGAUAAGUACG B.burgdo.5 3150 |ACCUAA------------------------(-gcaa-)----------- B.burgdo.5 3200 ------------UUAGG-U|A(GCA)UAAAAAUGGUC-CAAA|CGACU-- B.burgdo.5 3250 ---GU(UUACCAAAA)ACACAGGUCUCUG|CAAAUCU(GUAA------)A B.burgdo.5 3300 GAGAAGU-AUAGGGACUGA-CACCUGCCCGGU|GCUG-GAA-GGUUAAGA B.burgdo.5 3350 GGAGAUGUUAGU--------(U-UAU)-----------GCGA-AGCAUUG B.burgdo.5 3400 AAUUUAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.burgdo.5 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA B.burgdo.5 3500 AUGGUGUAACGA-UUUGGACGCUGUCUCAACGUGGAGCUCG|GUGAAAUU B.burgdo.5 3550 |GAAGUAU-CGG(UGAAGAUG)CCGAUUACUUGUGGU-UAGACGGAAAGA B.burgdo.5 3600 CCCCGUGA|ACCU-UUACUAU|AGCUUGGUAUU|GAGAUUUGAUUAAAUA B.burgdo.5 3650 UGUGUAGGAUAGGUGGGAGACUUUGAAG--CUAUCUC(GUCA)GGGGUAG B.burgdo.5 3700 UGGAGUCAAU-C-UUGAAAUACCACC|CUUG-UUUAAUUAGGU-UUCUAA B.burgdo.5 3750 -CUU-AUA-------(---G-AAA)----UAUGAG-GAGAGUGCCAGGUG B.burgdo.5 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG B.burgdo.5 3850 U|G|C|GCAAAGGUUACC|UUAGAGUGG(UUGGAAA)UCACUCUGU-AA| B.burgdo.5 3900 GU(G|UAAAG)GCAUAAGGUAGCUUAACUGUAAGAC(UGACAA)GUCGAA B.burgdo.5 3950 CAGAUAC(GAAA)GU-AGGU|CUUAGUGAUCUGGCGGUGGCA(AGUGGA) B.burgdo.5 4000 AGC|GCCGUCACUUAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC B.burgdo.5 4050 UUA--UCCUUCCCAAGA(G-UUC-ACA)UCGACGGAA-GGGU-UUGGCAC B.burgdo.5 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UAGGGCU(GGAGC---A)-GGU B.burgdo.5 4150 CCUAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-CGAGCUGG B.burgdo.5 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCACA B.burgdo.5 4250 A-G|CG-UUGGAUAUUU|GA-|GAGGAGC-UAU--------------CUU B.burgdo.5 4300 (UAGUAC(GAGA)GGACC)GAGAUGG|ACGAACCUCUAGUGUACCAGU|U B.burgdo.5 4350 AUCCU(GC-CA-)AGGGUAAGUGCUGGGUAGCU-ACGUUCGGAAAGGAUA B.burgdo.5 4400 ACCGCU(GAAAGCAUCUA)AGUGGGAAGCCUUCCUC|AAGAUGAGAUAUC B.burgdo.5 4450 C|UU|------(------)--------UA--AGG|-GU|CCUGG-(AAGA B.burgdo.5 4500 AU-A)CCAGG-UCGAUAG|GUUAG|AAGUG-UAAGUAUA--(GCAA-)-- B.burgdo.5 4550 UAUAU|UA-AGCUG|A|CUAAUACUAAUU-ACCCGU-AU|~~~~~~~~~~ B.burgdo.5 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.5 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.5 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.burgdo.5 4750 ~~~|||||| L.santaros 0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~ L.santaros 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ L.santaros 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ L.santaros 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ L.santaros 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ L.santaros 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ L.santaros 550 ~~~~~~~~~~~~~~(~~~~~~~)~~~~~|~~~~~~~~~~~~~(~~~~~)~ L.santaros 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~ L.santaros 650 ~)-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~(~~~~~~~ L.santaros 800 )~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~ L.santaros 900 ~~~~~~~~~~~~~~(~~~~~~)~~-~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~ L.santaros 1000 ~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~) L.santaros 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| L.santaros 1150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~ L.santaros 1200 ~~~~~~~~~~~~~(~~~~~)~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~ L.santaros 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 1300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~(~~~~) L.santaros 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~|~~~~ L.santaros 1400 ~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ L.santaros 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|~~~~~~~~~~~~~~| L.santaros 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~~~~~~(~~ L.santaros 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~ L.santaros 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ L.santaros 1650 ~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ L.santaros 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~|~(~~~)~|~~~ L.santaros 1800 ~~~(~~~~~~)~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~ L.santaros 1850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~|~|GCCGA----|----|----- L.santaros 1900 --------[*]--------------------------------------- L.santaros 1950 -------------------------------------------------- L.santaros 2000 -------------------------------------------------- L.santaros 2050 -------------------------------------------------- L.santaros 2100 -------------------------------------------------- L.santaros 2150 -----------------------------------)-------------- L.santaros 2200 -------AGAG|-----CGUU-CUU-UCU--------------------- L.santaros 2250 -------------------------------------------------- L.santaros 2300 --------------------------------U-CCGU-UGAAGGCG-U- L.santaros 2350 A-CC(-GUAA-)G-A--GCGCUGG|AGGAGU-AAGAAGUGAAGA~~~-~~ L.santaros 2400 ~~|~~~-~~~~--~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ L.santaros 2450 ~~~~~~~~~~~~~~~~-~~~~~~~-(~~~~~)~~|~-~~~~~~~~~~~~| L.santaros 2500 ~~~|~-~~~~~~~~~~~~~~~(~~~~)-~~~~~~-~~~~~~~~~-~~~~~ L.santaros 2550 ~~~-(~~-~~~~~~)~-~~~~~~~|~~-~-~~-~~~-~~~~~~~~~~~~~ L.santaros 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~ L.santaros 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~-------------- L.santaros 2800 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ L.santaros 2850 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ L.santaros 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~--~~~~~-~~ L.santaros 2950 ~~~~-~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~ L.santaros 3000 ~~~~~~-~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~~ L.santaros 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-~~~~)~~~~~~~~~~~ L.santaros 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(-~~~~~)~~~~~~~~~~~ L.santaros 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~-- L.santaros 3250 --~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~---~~~)~ L.santaros 3300 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~|~~~~-~~~-~~~~~~~~ L.santaros 3350 ~~~~~~~~~~~~~~~~~~--(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 3400 ~~~~~~~~~~|~~~~~~~~~|-~~~|~~~~~~(~~~~~~~)~~~~~~|~( L.santaros 3450 ~~~)~~~~~~~-~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ L.santaros 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ L.santaros 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ L.santaros 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ L.santaros 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ L.santaros 3700 ~~~~~~~~~~~~-~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~-~~~~~~ L.santaros 3750 -~~~~~~~~~~~~~~(~~~~-~~~)-~~~~~~~~~-~~~~~~~~~~~~~~ L.santaros 3800 ~~-~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ L.santaros 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~-~~| L.santaros 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ L.santaros 3950 ~~~~~~~(~~~~)~~-~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) L.santaros 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ L.santaros 4050 ~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~~~ L.santaros 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~---~)-~~~ L.santaros 4150 ~~~~~~~~~|~~~~~(~~~~~)~~-~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ L.santaros 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ L.santaros 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ L.santaros 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ L.santaros 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ L.santaros 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~-~~~~~~~~~~(~~~~~)~~ L.santaros 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~-~~~~~~~~~|~~~~~~~~~~ L.santaros 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.santaros 4750 ~~~|||||| L.borgpete 0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~ L.borgpete 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ L.borgpete 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ L.borgpete 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ L.borgpete 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ L.borgpete 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ L.borgpete 550 ~~~~~~~~~~~~~~(~~~~~~~)~~~~~|~~~~~~~~~~~~~(~~~~~)~ L.borgpete 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~ L.borgpete 650 ~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~(~~~~~~~ L.borgpete 800 )~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~ L.borgpete 900 ~~~~~~~~~~~~~~(~~~~~~)~~-~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~ L.borgpete 1000 ~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 1050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~) L.borgpete 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| L.borgpete 1150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~ L.borgpete 1200 ~~~~~~~~~~~~~(~~~~~)~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~ L.borgpete 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 1300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~(~~~~) L.borgpete 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~|~~~~ L.borgpete 1400 ~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 1450 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~|~~~~~~~~~~~~~~| L.borgpete 1500 ~~~~|~~~~~~|~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~~~~~~(~~ L.borgpete 1550 ~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~ L.borgpete 1600 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ L.borgpete 1650 ~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~|~~~~~ L.borgpete 1700 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 1750 ~~~~~~~~~~~~~~~~~~(~~~~~~GCA)GGAAU-UCU|U(UAA)A|GAG L.borgpete 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-GCU-CC--CGC|GCCGA L.borgpete 1850 AAAU-GUAAUCGGGACU-AAGCAUG-G|C|GCCGAA---|----|----- L.borgpete 1900 --------[*]--------------------------------------- L.borgpete 1950 -------------------------------------------------- L.borgpete 2000 -------------------------------------------------- L.borgpete 2050 -------------------------------------------------- L.borgpete 2100 -------------------------------------------------- L.borgpete 2150 -----------------------------------)-------------- L.borgpete 2200 -----GGAGAG|-----CGUU-CUU-UCU--------------------- L.borgpete 2250 -------------------------------------------------- L.borgpete 2300 --------------------------------U-CCGU-UGAAGGCG-U- L.borgpete 2350 A-CC(-GUAA-)GGA--GCGCUGG|AGGAGU-AAGAAGUGAAGAUGC-UG L.borgpete 2400 GC|AUG-AGUA--GCGUAAAGGGGAG(UGAGAUU)CUUCCC|CACC-GAU L.borgpete 2450 AGCCUAAGGUUUCCCC-GGGAAGG-(CCAAU)CC|G-CCGGGGGUUAGU| L.borgpete 2500 CGG|C-CCCUAAGACGAGGCU(AAGA)-AUGCGU-AGUCGAUGG-GAAGC L.borgpete 2550 AGG-(UU-CAUA--)--gucg|AC|cu-g-ca-ggc-augcaagcuugca L.borgpete 2600 cug~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~ L.borgpete 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~-------------- L.borgpete 2800 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ L.borgpete 2850 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ L.borgpete 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~--~~~~~-~~ L.borgpete 2950 ~~~~-~~~~|~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~ L.borgpete 3000 ~~~~~~-~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~~ L.borgpete 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(-~~~~)~~~~~~~~~~~ L.borgpete 3150 |~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~(-~~~~~)~~~~~~~~~~~ L.borgpete 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~-- L.borgpete 3250 --~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~---~~~)~ L.borgpete 3300 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~|~~~~-~~~-~~~~~~~~ L.borgpete 3350 ~~~~~~~~~~~~~~~~~~--(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 3400 ~~~~~~~~~~|~~~~~~~~~|-~~~|~~~~~~(~~~~~~~)~~~~~~|~( L.borgpete 3450 ~~~)~~~~~~~-~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ L.borgpete 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ L.borgpete 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~-~~~~~~~~~~~~ L.borgpete 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ L.borgpete 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ L.borgpete 3700 ~~~~~~~~~~~~-~~~~~~~~~~~~~|~~~~-~~~~~~~~~~~-~~~~~~ L.borgpete 3750 -~~~~~~~~~~~~~~(~~~~-~~~)-~~~~~~~~~-~~~~~~~~~~~~~~ L.borgpete 3800 ~~-~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ L.borgpete 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~-~~| L.borgpete 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ L.borgpete 3950 ~~~~~~~(~~~~)~~-~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) L.borgpete 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ L.borgpete 4050 ~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~~~ L.borgpete 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~---~)-~~~ L.borgpete 4150 ~~~~~~~~~|~~~~~(~~~~~)~~-~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ L.borgpete 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ L.borgpete 4350 ~~~~~(~~~~~-)~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ L.borgpete 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ L.borgpete 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ L.borgpete 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~-~~~~~~~~~~(~~~~~)~~ L.borgpete 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~-~~~~~~~~~|~~~~~~~~~~ L.borgpete 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.borgpete 4750 ~~~|||||| L.interrog 0 -------------------------------------------------- L.interrog 50 ----------------------------|---------GGUCAAGUAAG- L.interrog 100 --AAAGGGCGUACGGGGGAUG|CCCGGG|CAUCAGG|AC|GC-GAUGAAG L.interrog 150 GA|CGUG(GCUU-UC-)U|-GCG-AUAAGCAACGGG|-GAGUU(G-UA-A L.interrog 200 GCA-)AGCAUUG-AUC-CGUUGAUU|UCCGAAUGGG(GCAA)CCC|UCUU L.interrog 250 GGU-(--------------------------------------------- L.interrog 300 -------------------------------------------------- L.interrog 350 -------------------------------------------------- L.interrog 400 -------------------------------------------------- L.interrog 450 ---gaaua)-ACCGAGA-ACGC-------(---aaac-----)------- L.interrog 500 -G-C--GAG-C-AAAG|UC-GGGGAAUU|GA(AACA)UCUUAGUA-CCCG L.interrog 550 GAAUAAAAGAAAAU(-AAGA--)AUGAU|UCC-GUCAGUAGC(GGUGA)G L.interrog 600 CGA-ACG-CGGA-AGA-GCCUAAAccccugccuacguuaca-gau(cuaa L.interrog 650 -)---uuc-gcuguagcagggguguuguaggacuggca---------gga L.interrog 700 gua(gauuagaa)ugcucc------acaaaguuaccaagcacaagauu-a L.interrog 750 gcaGAAc-gguau(u-ggaaa)a-gccgac|c(aua)gaGGG(UGAAAGU L.interrog 800 )CCUGU-Aagc-gaaaauuuugugccuuugg------------------- L.interrog 850 -----ccaguauccu---GAGUACCACGGAA(CACGUG-UAA)UUCAGUG L.interrog 900 GGAAUCU-GCG-GG(GACCAC)CC-CGU-AAGGCUAA----ACAGUACCU L.interrog 950 GAUGACCGAUAGAG-AAC-AAGUACC(GCGA)-GGGA-AAGGUGAAAA-G L.interrog 1000 UACCGG(GG-GA-)CCGGA--GUGAAA-UAGUACCUGAAACCGU-AUGCU L.interrog 1050 UACAA-GGU-AUCAGAGCCU------------------(---uuuaau-) L.interrog 1100 -----------------GGGUGAUGGUGUGCCU(UUU-GUAG|A)AUGA| L.interrog 1150 -GCCGGCGAGUUAU-UUUA-CGUUGC-AAGCUUAAGGCA(GUGAGA)UGC L.interrog 1200 C-GUAGGCGAAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGu-------- L.interrog 1250 -------------------------ua-aaG-UAGCGUGGAAUA-GACCC L.interrog 1300 GAAGC-CUG-UCGA-GCUAUCCAUGUC|CAGGUUGAAGGUGGGG(UAAA) L.interrog 1350 AC-UCACUGGAGGACCGAACC-CUUUUUC(-GUUGAAAA)GAAUU|GGG- L.interrog 1400 AUGAG-GUGUGGAUAGGGGU(-GAAAG)GCCUAUCAAGGCAGGCGAUAGC L.interrog 1450 UGGUUCUCUCCGAAAUAGGU(-UUAG)GCCUAGC|-GUCAGUUGU---u| L.interrog 1500 -uag|UUGCGG|GGGUAG|AGC-UCUGA-AAGGACUA-GG|-GGGCC(ca L.interrog 1550 ca-)AGCUUACCAAACCCUA-UCAAACUUCGAA-UA-|CCG-U-A-A--- L.interrog 1600 cuc--caaA|GAC-UGGCAGUCAGAC--UAC-GGGG(GAUAAG)CUCCGU L.interrog 1650 -GGUC-AAAAGGG(-AAACAG-)CCCAGACCGUCGUUUAAG-GC|CCCA- L.interrog 1700 AAG-UUCAUG-C-UAA-GUG------GCAAAGGAUGUG-GGGGCGCAUA- L.interrog 1750 UACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAG L.interrog 1800 UGC(GUAAUA)GC|UCACUGGU-----CGAGU-GCU-CC--CGC|GCCGA L.interrog 1850 AAAU-GUAAUCGGGACU-AAGCAUG-G|C|GCCGAAGGC|ACGG|auucc L.interrog 1900 -------(guaa-------------------------------------- L.interrog 1950 -------------------------------------------------- L.interrog 2000 -------------------------------------------------- L.interrog 2050 -------------------------------------------------- L.interrog 2100 -------------------------------------------------- L.interrog 2150 -----------------------------------)--------ggagu- L.interrog 2200 GG-UAGGAGAG|-----CGUU-CUU-UCU--------------------- L.interrog 2250 -------------------------------------------------- L.interrog 2300 --------------------------------U-CCGU-UGAAGGCG-U- L.interrog 2350 A-CC(-GUAA-)GGA--GCGCUGG|AGGAGU-AAGAAAUGAAGAUGC-UG L.interrog 2400 GC|AUG-AGUA--GCGUAAAGGGGAG(UGAGAUU)CUUCCC|CACC-GAU L.interrog 2450 AGCCUAAGGGUUCCCC-GGGAAGG-(CCAAU)CC|G-CCGGGGGUUAGU| L.interrog 2500 CGG|C-CCCUAAGACGAGGCU(AAGA)-AUGCGU-AGUCGAUGG-GAAGC L.interrog 2550 AGG-(UU-CAUAUU)C-CUGC|AC|cg-a-gu-aaa-uugu--------- L.interrog 2600 -------------------------------------------------- L.interrog 2650 -------------------------------------------------- L.interrog 2700 ------gcgau------ggag--uga-cgcaggaggaua-guua-g-|ug L.interrog 2750 c-ggc(uu--auuggu-u----)gc-cgu--|ugcg-------------- L.interrog 2800 ---agua-guaggcauug----agagu-gauugg(aa-aa-u-)cc|g-- L.interrog 2850 ucacuuga-------------gcu-gagaacuc-gcgg|gau-|------ L.interrog 2900 -----ccuaac(-gaau--)guuaggc---------guag--cuuuc-ga L.interrog 2950 cucc-aag-|cugccaagaaauagcuuc-uaaguu-----------uagg L.interrog 3000 -uuuau--ucg|A|CCGUACCGCAAACC(GACACA)GG|UAG-GCAAGU- L.interrog 3050 A-(GAGAA)UACUAAGGUGU||UCGAGAUAACUCUCGUU----------- L.interrog 3100 ----AAGGAACUCGGCAAAUUACUCCUGUAAC(-UUCG)GGAUAAGGGAG L.interrog 3150 |ACCGGA----gaugcu--------uuagcc(-ugc--)ggcaaag---- L.interrog 3200 ---aguauc---GAAGG-U|G(GCA)CAAAAAUGGGG-GUAG|CGACU-- L.interrog 3250 ---GU(UUACCAAAA)ACACAGGACUCUG|CCAAAUC(GGAA------)G L.interrog 3300 AUGAAGU-AUAGGGUCUGA-CACCUGCCCGGU|GCUG-GAA-GGUCAAGA L.interrog 3350 GGACGGGUUAGCa-------(G-CAA)----------uGCGAAAGCUCGG L.interrog 3400 AAUUUAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( L.interrog 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA L.interrog 3500 AUGGUGUAACGA-CUUCCCCACUGUCUCAACGAGAGUCUCG|GCGAAAUU L.interrog 3550 |GUAGUAC-CCG(UGAAGAUG)CGGGUUACCUGCGAU-AGGACGGAAAGA L.interrog 3600 CCCCGUGA|ACCU-UUACUGU|AACCUGGCAUU|GAACUUUGGUCCUGUA L.interrog 3650 UGUGUAGGAUAGGUGGGAGGCUAUGAAA--UCUGGAC(GCCA)GUCUGGA L.interrog 3700 UGGAGCCGUC-G-UUGAAAUACCACC|CUUA-CUUGACCCAAG-UUCUAA L.interrog 3750 CCGA-AU----G---(-AAA-CAA)----CAUUCGAGACAAUGUCAGGCG L.interrog 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG L.interrog 3850 C|G|C|CCAAAGGUUCCC|UCAGCGCGG(ACGGAAA)UCGCGCCAA-GA| L.interrog 3900 GU(G|UAAAG)GCAUAAGGGAGCUUAACUGUGAGAC(AGACAA)GUCGAG L.interrog 3950 CAGGUAC(GAAA)GU-AGGG|CUUAGUGAUCCGGUGGUUCUG(UGUGGA) L.interrog 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC L.interrog 4050 UGA--UCGCGUCCAAGA(G-UCC-AUA)UCGACGACG-CGGU-UUGGCAC L.interrog 4100 CUCGAUGUC|GGCU|C|GUCGC|AUCC|UGGGGCU(GAAGC---A)-GGU L.interrog 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-CGAGCUGG L.interrog 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CC|AUCGCA L.interrog 4250 G-G|CG-UUGGAGAUUU|GA-|CGGAAUC-UGU--------------CCC L.interrog 4300 (UAGUAC(GAGA)GGACC)GGGAUGG|ACGAACCUCUGGUGUAUCAGU|U L.interrog 4350 GUUUC(GC-CA-)GAAGCA-ACGCUGAGUAGCU-AUGUUCGGCAGGGAUA L.interrog 4400 ACCGCU(GAAAGCAUAUA)AGUGGGAAACCCUUCUG|AAGAUAAGAUCUC L.interrog 4450 C|CU|GGGA--(-GCAA-)--UCCC-CUA-AAGA|-CC|CCAAG-(AAGA L.interrog 4500 UG-A)CUUGG-UUGAUAG|GUCAC|AGAUG-CAAGUGUG--(GUAA-)-- L.interrog 4550 CACAU|UC-AGUCG|A|GUGAUACUAAUC-GGUCGUGAG|GCUUGA-CCA L.interrog 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.interrog 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.interrog 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L.interrog 4750 ~~~|||||| PURPLE.ALP 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ PURPLE.ALP 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ PURPLE.ALP 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ PURPLE.ALP 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- PURPLE.ALP 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ PURPLE.ALP 350 -------------------------------------------------- PURPLE.ALP 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ PURPLE.ALP 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ PURPLE.ALP 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ PURPLE.ALP 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 700 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ PURPLE.ALP 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ PURPLE.ALP 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ PURPLE.ALP 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PURPLE.ALP 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| PURPLE.ALP 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PURPLE.ALP 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ PURPLE.ALP 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ PURPLE.ALP 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| PURPLE.ALP 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ PURPLE.ALP 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ PURPLE.ALP 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ PURPLE.ALP 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- PURPLE.ALP 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ PURPLE.ALP 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ PURPLE.ALP 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ PURPLE.ALP 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- PURPLE.ALP 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ PURPLE.ALP 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ PURPLE.ALP 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| PURPLE.ALP 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ PURPLE.ALP 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ PURPLE.ALP 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ PURPLE.ALP 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- PURPLE.ALP 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ PURPLE.ALP 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ PURPLE.ALP 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ PURPLE.ALP 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- PURPLE.ALP 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PURPLE.ALP 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- PURPLE.ALP 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ PURPLE.ALP 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ PURPLE.ALP 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( PURPLE.ALP 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ PURPLE.ALP 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ PURPLE.ALP 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PURPLE.ALP 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ PURPLE.ALP 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ PURPLE.ALP 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ PURPLE.ALP 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) PURPLE.ALP 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~-~| PURPLE.ALP 4050 ~~~~~--~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~ PURPLE.ALP 4100 ~~~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~ PURPLE.ALP 4150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 4200 ~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~|~~ PURPLE.ALP 4250 ~~~~~~~|~~~~~~~~~~~~-|~-|~~~~~-~~~~~~------------- PURPLE.ALP 4300 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ PURPLE.ALP 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~ PURPLE.ALP 4450 ~~~~~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~ PURPLE.ALP 4500 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 4550 ~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.ALP 4750 ~~~~||||| R.rubrum 0 -------------------------------------------------- R.rubrum 50 ----------------------------|--cgugguuucUCAAGCAAG- R.rubrum 100 A-GAAGGGCAUCUGGUGGAUG|CCUUGG|CGUCAAG|AG|GC-GAUGAAG R.rubrum 150 GA|CGUG(GCAC-UC-)U|-GCG-AAAAGCCAUGGG|-GAGCU(G-AG-A R.rubrum 200 GCA-)AGCUUUG-AUC-CAUGGAUA|UCCGAAUGGG(GAAA)CCC|ACCC R.rubrum 250 C---(--------------------------------------------- R.rubrum 300 -------------------------------------------------- R.rubrum 350 -------------------------------------------------- R.rubrum 400 -------------------------------------------------- R.rubrum 450 ----uuau)---GGGGU-AUCCGUAG-CU(GA-AUCCA--UA)GGG-CUA R.rubrum 500 CG-G--AAG-C-GAAC|CC-GGCGAACU|GA(AACA)UCUAAGUA-GCCG R.rubrum 550 GAGGAAAGGAAAUC(-AACC--)GAGAC|UCC-GUUAGUAGU(GGCGA)G R.rubrum 600 CGA-ACG-CGGA-UCA-GCCc------------------------(---- R.rubrum 650 -)------------------------------------------------ R.rubrum 700 -------------------------------agugguauuuaugucuaaa R.rubrum 750 ccgGAAc-cgu-c(u-ggaaa)g-ucgggc|c(aua)gcGGG(UGACAGC R.rubrum 800 )CCCGU-Acgg-guagauggcauuuauauc-------------------- R.rubrum 850 ---------------cucGAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.rubrum 900 UGAACGU-GGG-GG(GACCAC)CC-UCC-AAGGCUAA----GUACUCCUU R.rubrum 950 GACGACCGAUAGUG-CAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.rubrum 1000 CACCCC(GAUGA-)GGGGA--GUGAAA-CAGAUCCUGAAACCGG-AUGCC R.rubrum 1050 UACAA-G-CAGUCGGAGCCU--C---------------(----uucg--) R.rubrum 1100 ---------------G-AGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.rubrum 1150 -GUCAGCGACUUAA-UCUG-GCGAGC-AAGCUUAAGCC-(-G-AUA)-GG R.rubrum 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(UAA-UA)GGGCGU-------- R.rubrum 1250 --------------------------c-gaG-UUCGUCGGAUUA-GACCC R.rubrum 1300 GAAAC-CGG-GUGA-UCUAGCCAUGGG|CAGGUUGAAGGUGGAG(UAAC) R.rubrum 1350 AC-CCACUGGAGGACCGAACC-CACGUCU(-GUUGAAAA)AGACG|GGG- R.rubrum 1400 AUGAC-CUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAAAUAGC R.rubrum 1450 UGGUUCUCCGCGAAAGCUAU(-UUAG)GUAGCGC|-GUCGGAUGA---U| R.rubrum 1500 -UAC|CACCGG|GGGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGGCC(gc R.rubrum 1550 ga-)GGCCUACCAAACCUAA-CCAAACUCCGAA-UA-|CCG-G-U-G--A R.rubrum 1600 GUAC----A|GUC-CGGCAGACAGAC--UCA-GGGU(GCUAAC)GUCCUG R.rubrum 1650 -GGUC-AAGAGGG(-AAACAA-)CCCAGACCACCAGCUAAG-GU|CCCC- R.rubrum 1700 AAGUC-ACGG-C-UAA-GUG------GGAAAGGAUGUG-GGACGGCCAU- R.rubrum 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA R.rubrum 1800 AGC(GUAACA)GC|UCACUGGUcua--auaGC-UAU-CC--UGC|GCCGA R.rubrum 1850 AGAU-GUAC-CGGGGCUCAAGCCGU-G|C|ACCGAAGCU|GUGG|auucu R.rubrum 1900 uuc----(uucg-------------------------------------- R.rubrum 1950 -------------------------------------------------- R.rubrum 2000 -------------------------------------------------- R.rubrum 2050 -------------------------------------------------- R.rubrum 2100 -------------------------------------------------- R.rubrum 2150 -----------------------------------)-----gaaagagu- R.rubrum 2200 GG-UAGCGGAG|-----CGUU-CCG-UAG--------------------- R.rubrum 2250 -------------------------------------------------- R.rubrum 2300 --------------------------------G-CCUG-UGAAGGUG-U- R.rubrum 2350 C-UC(-GUAA-)GGG--AUGCUGG|AGGUAU-CGGAAGCGAGAAUGC-UG R.rubrum 2400 AC|AUG-AGUA--GCGACAAGGAGUG(UGAGAAA)CACUCC|CGCC-GAA R.rubrum 2450 AGCCCAAGGGUUCCUG-CGCAAGG-(CUAAU)CC|G-CGCAGGGUGAGU| R.rubrum 2500 CGG|C-CCCUAAGUCGAGGGC(GAAA)-G-CCGU-AGACGAUGG-GAAUC R.rubrum 2550 AGG-(UU-AAUAUU)C-CUGA|AC|uc-g-ug-aga-------------- R.rubrum 2600 -------------------------------------------------- R.rubrum 2650 -------------------------------------------------- R.rubrum 2700 -------------------ug--uga-cgccu--uucggacguu-g-|uu R.rubrum 2750 c-cuc(cuuaucggau-ug---)ga-gggg-|------------------ R.rubrum 2800 ----------------------------------(--------)--|--- R.rubrum 2850 --------------------------------------|----|------ R.rubrum 2900 -----------(-------)-----------------------cagg-ca R.rubrum 2950 ggaa-----|aggccgggaaa-ua-----------------------a-c R.rubrum 3000 cucacguauga|a|CCGUACCCCAAACC(GACACA)GG|uGG-GCUGGU- R.rubrum 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAAUGGUGUUG----------- R.rubrum 3100 ----AAGGAACUAGGCAAAUUGCCCCCGUAAC(-UUCG)GGAGAAGGGGG R.rubrum 3150 |cccu------cgu------------ggugg(-gcaa-)ccauc------ R.rubrum 3200 ------aug-----ggg-g|G(GCA)CAGACCAGGGG-GUGG|CGACU-- R.rubrum 3250 ---GU(UUACUAAAA)ACACAGGGCUCUG|CGAAGUC(GCAA------)G R.rubrum 3300 ACGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGA R.rubrum 3350 GGAGAG----GU--------(G-CAA)-----------GC------UUUG R.rubrum 3400 AAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.rubrum 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.rubrum 3500 AUGGCGUAACGA-CUUCCCCGCUGUCUCCAACACCAACUCA|GCGAAAUU R.rubrum 3550 |GAAUUCU-CCG(UGAAGAUG)CGGAGUUCCCACGGC-CAGACGGAAAGA R.rubrum 3600 CCCCAUGA|ACCU-UUACUAC|AACUUCGCAGU|GGCAUUAGGCGAUGGA R.rubrum 3650 UGUGUAGGAUAGGCGGGAGGCUUUGAAG--CAUAGGC(GCCA)GCUUGUG R.rubrum 3700 UGGAGCCACC-C-UUGAAAUACCGCC|CUUC-CGUCUCCUGAU-GUCUAA R.rubrum 3750 -CCGCGG----CCCG(--UG-AUC)-CGGGUCCGG-GACCCUGCGUGGUG R.rubrum 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGAGUAAC)GGAGG R.rubrum 3850 C|G|C|GCGAUGGUGGGC|UCAGGCCGG(UCGGAAA)UCGGCUGAU-GA| R.rubrum 3900 GU(G|CAAUG)GCAAAAGCCCGCCUGACUGCGAGAG(CGACAG)UUCGAG R.rubrum 3950 CAGAGUC(GAAA)GA-CGGU|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) R.rubrum 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.rubrum 4050 UGA--UACUGCCCAAGA(G-UCC-ACA)UCGACGGCA-GUGU-UuGGCAC R.rubrum 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGC---A)-GGU R.rubrum 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG R.rubrum 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|ACCGUG R.rubrum 4250 G-G|UG-UAGGAUACUU|GA-|GAGGAGC-UGU--------------CCC R.rubrum 4300 (UAGUAC(GAGA)GGACC)GGGAUGG|ACAUACCUCUGGUGUACCAGU|U R.rubrum 4350 GUCAC(GC-CA-)GUGGCA-CCGCUGGGUAGCU-AAGUAUGGACGGGAUA R.rubrum 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCCUCCCUC|AAAACCAGGUAUC R.rubrum 4450 C|CU|------(------)--------aU-CAGG|-AC|CGUGG-(AAGA R.rubrum 4500 CC-A)CCACG-UUGAUAG|GCCGG|GUGUG-GAAGCGCA--(GUAA-)-- R.rubrum 4550 UGCGU|GA-AGCUA|A|CCGGUACUAAUC-GUCCGAUCG|GCUUGA-UUG R.rubrum 4600 A-------|ccacgcgca-------------------------------- R.rubrum 4650 -------------------------------------------------- R.rubrum 4700 -------------------------------------------------- R.rubrum 4750 ---|||||| A.xylinus 0 -------------------------------------------------- A.xylinus 50 ----------------------------|----------AAUGAGCGCG- A.xylinus 100 A-UAAGGGCAUUCGGUGGAUG|CCUUGG|CACCAGG|AG|GC-GAUGAAA A.xylinus 150 GA|CGUG(GCAC-GC-)U|-GCG-AAAAGUCAUGGG|-GAGCC(G-CG-A A.xylinus 200 GCA-)GGCUUUG-AUC-CGUGGAUA|UCUGAAUGGG(GGAA)CCC|ACCC A.xylinus 250 A---(--------------------------------------------- A.xylinus 300 -------------------------------------------------- A.xylinus 350 -------------------------------------------------- A.xylinus 400 -------------------------------------------------- A.xylinus 450 ----gcga)---UGGGU-AUCA-UGUUCU(GA-AUACA--UA)GGG-ACA A.xylinus 500 -U-G--AGG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG A.xylinus 550 GAGGAAAAGACAUC(-AAUU--)GAGAU|UCU-GCUAGUAGU(GGCGA)G A.xylinus 600 CGA-ACG-CGGA-ACA-GGCC------------------------(---- A.xylinus 650 -)------------------------------------------------ A.xylinus 700 -------------------------------aguggcuguuuuugaagaa A.xylinus 750 gcaGAAc-gga-a(u-ggaaa)g-uccggc|c(aua)gcGGG(UGAUAGC A.xylinus 800 )CCCGU-Augc-guaauaucaggaacaguc-------------------- A.xylinus 850 ---------------cuuGAGUAGGGCGGGA(CACGUG-GAA)UCCUGUC A.xylinus 900 UGAACAU-GGG-AG(GACCAC)CC-UCC-AAGCCUAA----AUACUCCCU A.xylinus 950 GGUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G A.xylinus 1000 CACCCC(GACGA-)GGGGA--GUGAAA-UAG-ACCUGAAACCGA-AUGCC A.xylinus 1050 UACAA-G-CAGUCGGAGCCU--C---------------(----uuau--) A.xylinus 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| A.xylinus 1150 -GUCAGCGAGUUUC-UGUU-UGCAGC-AAGCUUAAGCC-(-G-UUA)-GG A.xylinus 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGA-------- A.xylinus 1250 --------------------------c-gaG-UUGCUGGCAGAA-GACAC A.xylinus 1300 GAAAC-CGA-GUGA-UCUAGCCAUGGC|CAGGCUGAAGGUGCGG(UAAC) A.xylinus 1350 AC-GCACUGGAGGGCCGAACC-CACGCCU(-GUUGAAAA)AGUCG|GGG- A.xylinus 1400 AUGAG-CUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAAAUAGC A.xylinus 1450 UGGUUCUCCCCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGGACGA---A| A.xylinus 1500 -UAC|CAUAGG|GGGUAG|AGC-ACUGU-UUCGGCUA-GG|-GGGUC(au A.xylinus 1550 ccc)GACUUACCAAACCGAU-GCAAACUCCGAA-UA-|CCU-A-U-G--A A.xylinus 1600 GUAC----U|AUC-CGGGAGACAGAC--UGC-GGGU(GCUAAC)GUCCGU A.xylinus 1650 -AGUC-AAGAGGA(-AAACAA-)UCCAGACCGCCAGCUAAG-GC|CCCC- A.xylinus 1700 AAAUU-AUAG-U-UAA-GUG------GGAAACGAUGUG-GGAAGGCAUA- A.xylinus 1750 GACAGCUAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA A.xylinus 1800 AGC(GUAAUA)GC|UCACUAGU-----CGAGU-CGG-CCUCUGC|GCGGA A.xylinus 1850 AGAU-GUAA-CGGGGCUAAAACUAU-A|U|GCCGAAGCU|GCGG|auuug A.xylinus 1900 caa----(uuua-------------------------------------- A.xylinus 1950 -------------------------------------------------- A.xylinus 2000 -------------------------------------------------- A.xylinus 2050 -------------------------------------------------- A.xylinus 2100 -------------------------------------------------- A.xylinus 2150 -----------------------------------)-----uugcaagu- A.xylinus 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- A.xylinus 2250 -------------------------------------------------- A.xylinus 2300 --------------------------------G-CCGA-UGAAGGUG-U- A.xylinus 2350 A-UU(-GAGA-)AGU--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG A.xylinus 2400 AC|GUG-AGUA--ACGACAAUGCGAG(UGAAAAA)CUCGCA|CGCU-GAA A.xylinus 2450 AGACCAAGGGUUCCAG-UCCAACG-(UUAAU)CG|G-GGCUGGGUGAGU| A.xylinus 2500 CGA|C-CCCUAAGGCGAGGCC(GAGA)-G-CGGU-AGUCGAUGG-GAAAU A.xylinus 2550 UGG-(UU-AAUAUU)C-CAAU|AC|uu-c-ua-ugu-aau---------- A.xylinus 2600 -------------------------------------------------- A.xylinus 2650 -------------------------------------------------- A.xylinus 2700 ------gcgau------gaga--gga-cggagaagguua-aguc-a-|gc A.xylinus 2750 c-ugg(cg--uugg-u-ugu--)cc-aggu-|gga--------------- A.xylinus 2800 -agguuguaggcau---------guau-cuuagg(cacaa-u-)cc|g-- A.xylinus 2850 ggguacugu------------aug-cugagaacugaua|g---|------ A.xylinus 2900 --caagcugua(-cuug--)uacagu----------gaag--uggcugau A.xylinus 2950 accaug---|cuuccaggaaa-agucuc-uaagcuuca---------g-u A.xylinus 3000 uacaua--gga|a|UCGUACCCGAAACC(GACACA)GG|UGG-UCAGGU- A.xylinus 3050 C-(GAGUA)GACCAAAGCGC||UUGAGAGAACUCUGCUG----------- A.xylinus 3100 ----AAGGAACUAGGCAAAAUGGUACCGUAAC(-UUCG)GGAGAAGGUAC A.xylinus 3150 |gcugccgac-ggu----------gauggga(-uuuac)ucccuga---- A.xylinus 3200 -----gcgg-uuggcag-c|c(ACA)GAAACCAGGCC-CCUG|CAACU-- A.xylinus 3250 ---GU(UUAUUAAAA)ACAUAGCACUCUG|CAAACAC(GAAA------)G A.xylinus 3300 UGGACGU-AUAGGGUGUGA-UGCCUGCCCGGU|GCUG-GAA-GGUUAAUU A.xylinus 3350 GAUGGG----GU----uagc(g-uaa)gcgaa------GC------UCUU A.xylinus 3400 GAUCGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( A.xylinus 3450 UAA)GGUAGCG-AAAUUCCUU|CUCGGG(UAA-U)UCCGAC|CUGCACGA A.xylinus 3500 AUGGCGUAACGA-CUUCCCCUCUGUCUCCAGCAUCGGCUCA|GCGAAAUU A.xylinus 3550 |GAAUUCC-CCG(UGAAGAUC)GGGGGUACCCGCGGU-CAGACGGAAAGA A.xylinus 3600 CCCUAUGA|ACCU-UUACUGC|AGCUUUGCAGU|GGCAUCAGAGACAUUC A.xylinus 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGGC(GCCA)GUUCCGG A.xylinus 3700 UGGAGCCAUC-C-UUGAAAUACCACC|CUGA-CUGUUUCUGAU-GUCUAA A.xylinus 3750 -CCGAGG----CCUG(--UU-AGC)-CAGGUCCGG-GACCCUGCAUGGUG A.xylinus 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGUGUAAC)GGAGG A.xylinus 3850 C|N|C|GCGAUGGUGGGC|UCAGGCCGG(UCGGAAA)CCG-CUGUC-GA| A.xylinus 3900 GU(G|CAAUG)GCAUAAGCCCGCCUGACUGUGAGAG(UGACAG)CUCGAU A.xylinus 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) A.xylinus 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UAGG|GAUAACAG|GC A.xylinus 4050 UGA--UCUCCCCCAAGA(G-UCC-ACA)UCGACGGGG-AGGU-UUGGCAC A.xylinus 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|CGGGGCU(GGAGC---A)-GGU A.xylinus 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG A.xylinus 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG A.xylinus 4250 G-G|UG-UUGGAGACUU|GA-|GAGGAUU-UGU--------------CCC A.xylinus 4300 (UAGUAC(GAGA)GGACC)GGGAUGA|ACAUACCUCUGGUGCACCGGU|U A.xylinus 4350 GUCGC(GC-CA-)CUGGCA-CAGCCGGGUAGCU-AAGUGUGGACGGGAUA A.xylinus 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAAnnnnnnnn|nnnnnnnnnnnnn A.xylinus 4450 n|nn|nnnnnn(-nnn--)nnnnnn-nnn-nnnn|-nn|nnnnn-(nnnn A.xylinus 4500 nn-n)nnnnn-nnnnnnn|nnnnn|nnnnn-nnnnnnnn--(nnnn-)-- A.xylinus 4550 nnnnn|nn-nnnnn|n|nnnnnnnnnnnn-nnnnnnnnn|nnnnnn-nnn A.xylinus 4600 n-------|----------------------------------------- A.xylinus 4650 -------------------------------------------------- A.xylinus 4700 -------------------------------------------------- A.xylinus 4750 ---|||||| A.intermed 0 -------------------------------------------------- A.intermed 50 ----------------------------|----------AAUGAGCGCG- A.intermed 100 A-UAAGGGCAUUCGGUGGAUG|CCUUGG|CACCAGG|AG|GC-GAUGAAA A.intermed 150 GA|CGUG(GCAC-GC-)U|-GCG-AAAAGCCAUGGG|-GAGCC(G-CG-A A.intermed 200 GCA-)GGCUUUG-AUC-CGUGGGUA|UCUGAAUGGG(GCAA)CCC|ACCC A.intermed 250 A---(--------------------------------------------- A.intermed 300 -------------------------------------------------- A.intermed 350 -------------------------------------------------- A.intermed 400 -------------------------------------------------- A.intermed 450 ----gcga)---UGGGU-AUCA-UGUUCU(GA-AUACA--UA)GGG-ACA A.intermed 500 -U-G--AGG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG A.intermed 550 GAGGAAAAGACAUC(-AAUU--)GAGAU|UCU-GCUAGUAGU(GGCGA)G A.intermed 600 CGA-ACG-CGGA-ACA-GGCC------------------------(---- A.intermed 650 -)------------------------------------------------ A.intermed 700 -------------------------------agugguuguuucugaagaa A.intermed 750 gcaGAAc-gga-a(u-ggaaa)g-uccggc|c(aga)gcGGG(UGAUAGC A.intermed 800 )CCCGU-Augc-guagugucaggaaugauc-------------------- A.intermed 850 ---------------cuuGAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC A.intermed 900 UGAACAU-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----AUACUCCCU A.intermed 950 GGUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G A.intermed 1000 CACCCC(GACGA-)GGGGA--GUGAAA-GAG-ACCUGAAACCGA-AUGCC A.intermed 1050 UACAA-G-CAGUCGGAGCCU--C---------------(----uuau--) A.intermed 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| A.intermed 1150 -GUCAGCGAGUUUC-UGUU-UGCAGC-AAGCUUAAGCC-(-G-UUA)-GG A.intermed 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGA-------- A.intermed 1250 --------------------------c-gaG-UUGCUGGCAGAA-GACCC A.intermed 1300 GAAAC-CGA-GUGA-UCUAGCCAUGGC|CAGGCUGAAGGUGCGG(UAAC) A.intermed 1350 AC-GCACUGGAGGGCCGAACC-CACGCCU(-GUUGAAAA)AGUCG|GGG- A.intermed 1400 AUGAG-CUGUGGCUAGGGGU(-GAAAG)GCCAAUCAWASKMKSMAAUAGC A.intermed 1450 UGGUUCUCCSCGAAAUCUAU(-UGAG)GUAGACC|-GUCGAGUA----U| A.intermed 1500 -UAC|CCCGGG|GAGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGGGC(cc A.intermed 1550 aaa)GCCUUACCAAACCUAA-CCAAACUCCGAA-UA-|CUC-G-G-A--A A.intermed 1600 GUAU---gA|GCU-CGGCAGACAGAC--AGU-GGGU(GCUAAG)GUCCAU A.intermed 1650 -UGUC-GAGAGGG(-AAACAG-)CCCAGACCACCAGCUAAG-GC|CCCU- A.intermed 1700 AAAUC-GUGG-C-UAA-GUG------GGAAAGGAUGUG-GGGAUUCCAA- A.intermed 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA A.intermed 1800 AGC(GUAAUA)GC|UCACUGGUcua--auaGA-AAC-CC--UGC|GCCGA A.intermed 1850 AAAU-GUAA-CGGGGCUCAAGCCAC-G|U|GCCGAAGCU|GUGG|gugca A.intermed 1900 uuc----(uuu--------------------------------------- A.intermed 1950 -------------------------------------------------- A.intermed 2000 -------------------------------------------------- A.intermed 2050 -------------------------------------------------- A.intermed 2100 -------------------------------------------------- A.intermed 2150 -----------------------------------)-----gaaugcgc- A.intermed 2200 GG-UAGCGGAG|-----CGUU-CCG-UAG--------------------- A.intermed 2250 -------------------------------------------------- A.intermed 2300 --------------------------------G-UCUG-UGAAGGAG-Ac A.intermed 2350 G-GG(-GUGA-)CCC--UCUCUGG|AGAUAU-CGGAAGUGCGAAUGC-UG A.intermed 2400 AC|AUG-AGUA--GCGACAAACAGUG(CGAGAAA)CACUGU|CGCC-GAA A.intermed 2450 AGUCCAAGGGUUCCUG-CGCAAGG-(UUAAU)CC|G-CGCAGGGUGAGC| A.intermed 2500 CGG|C-CCCUAAGGCGAGGGC(GAAA)-G-CCGU-AGUCGAUGG-AAACC A.intermed 2550 GGG-(CA-AAUAUU)C-CCGG|GC|cu-g-cc-aga-------------- A.intermed 2600 -------------------------------------------------- A.intermed 2650 -------------------------------------------------- A.intermed 2700 -------------------ag--uga-cgaau-acaaua-uguu-g-|uc A.intermed 2750 g-ggu(cuuaucggau-ug---)au-ccgg-|------------------ A.intermed 2800 ----------------------------------(--------)--|--- A.intermed 2850 --------------------------------------|----|------ A.intermed 2900 -----------(-------)-----------------------cuuu-ug A.intermed 2950 gagu-----|auuccaggaaa-uagc-----------------------u A.intermed 3000 cuggcauauag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACUGGU- A.intermed 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACGAUGCUG----------- A.intermed 3100 ----AAGGAACUAGGCAAAUUACUUGCGUAAC(-UUCG)GGAUAAGCAAG A.intermed 3150 |accc------guc------------agugg(-gcaa-)ccauc------ A.intermed 3200 ------ggc-----ggg-U|G(GCA)CAGACCAGGGG-GUAG|CGACU-- A.intermed 3250 ---GU(UUAGUAAAA)ACACAGGGCUGUG|CGAAGUC(GAGA------)G A.intermed 3300 ACGACGU-AUACGGCCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGA A.intermed 3350 GGAGGU----GU--------(G-CAA)-----------GC------ACCG A.intermed 3400 AAUUGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( A.intermed 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA A.intermed 3500 AUGGCGUAACGA-CUUCCCCGCUGUCUCCAGCAUCGGCUCA|GCGAAAUU A.intermed 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUACCCGCGGU-CAGACGGAAAGA A.intermed 3600 CCCUAUGA|ACCU-UUACUGC|AGCUUUGCAGU|GGCAUCAGAGACAUUC A.intermed 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGGC(GCCA)GUUCCGG A.intermed 3700 UGGAGCCAUC-C-UUGAAAUACCACC|CUGA-CUGUUUCUGAU-GUCUAA A.intermed 3750 -CCGAGG----CCUG(--UU-AGC)-CAGGUCCGG-GACCCUGCAUGGUG A.intermed 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGUGUAAC)GGAGG A.intermed 3850 C|G|C|GCGAUGGUGGGC|UCAGGCCGG(UCGGAAA)CCGGCUGUC-GA| A.intermed 3900 GU(G|CAAUG)GCAUAAGCCCGCCUGACUGUGAGAG(UGACAG)CUCGAU A.intermed 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) A.intermed 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UAGG|GAUAACAG|GC A.intermed 4050 UGA--UCUCCCCCAAGA(G-UCC-ACA)UCGACGGGG-AGGU-UUGGCAC A.intermed 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGC---A)-GGU A.intermed 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG A.intermed 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG A.intermed 4250 G-G|UG-UUGGAGACUU|GA-|GAGGAUU-UGU--------------CCC A.intermed 4300 (UAGUAC(GAGA)GGACC)GGGAUGA|ACAUACCUCUGGUGCACCGGU|U A.intermed 4350 GUCGC(GC-CA-)GCGGCA-CAGCCGGGUAGCU-AAGUGUGGACGGGAUA A.intermed 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAA~~~~~~~~|~~~~~~~~~~~~~ A.intermed 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ A.intermed 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ A.intermed 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ A.intermed 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.intermed 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.intermed 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.intermed 4750 ~~~|||||| A.europa.1 0 -------------------------------------------------- A.europa.1 50 ----------------------------|----------AAUGAGCGCG- A.europa.1 100 A-UAAGGGCAUUCGGUGGAUG|CCUUGG|CACCAGG|AG|GC-GAUGAAA A.europa.1 150 GA|CGUG(GCAC-GC-)U|-GCG-AAAAGCCAUGGG|-GAGCC(G-CG-A A.europa.1 200 GCA-)GGCUUUG-AUC-CGUGGGUA|UCUGAAUGGG(GCAA)CCC|ACCC A.europa.1 250 A---(--------------------------------------------- A.europa.1 300 -------------------------------------------------- A.europa.1 350 -------------------------------------------------- A.europa.1 400 -------------------------------------------------- A.europa.1 450 ----gcga)---UGGGU-AUCA-UGUUCU(GA-AUACA--UA)GGG-ACA A.europa.1 500 -U-G--AGG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG A.europa.1 550 GAGGAAAAGACAUC(-AAUU--)GAGAU|UCU-GCUAGUAGU(GGCGA)G A.europa.1 600 CGA-ACG-CGGA-ACA-GGCC------------------------(---- A.europa.1 650 -)------------------------------------------------ A.europa.1 700 -------------------------------aguguucauuuuugaagaa A.europa.1 750 gcaGAAc-gga-a(u-ggaaa)g-uccggc|c(aua)gcGGG(UGAUAGC A.europa.1 800 )CCCGU-Augc-guagugucaggaaugauc-------------------- A.europa.1 850 ---------------cuuGAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC A.europa.1 900 UGAACAU-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----AUACUCCCU A.europa.1 950 GGUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G A.europa.1 1000 CACCCC(GACGA-)GGGGA--GUGAAA-UAG-ACCUGAAACCGA-AUGCC A.europa.1 1050 UACAA-G-CAGUCGGAGCCU--C---------------(----uuau--) A.europa.1 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| A.europa.1 1150 -GUCAGCGAGUUUC-UGUU-UGCAGC-AAGCUUAAGCC-(-G-UUA)-GG A.europa.1 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-CA)GGGCGA-------- A.europa.1 1250 --------------------------c-gaG-UUGCUGGCAGAA-GACAC A.europa.1 1300 GAAAC-CGA-GUGA-UCUAGCCAUGGC|CAGGCUGAAGGUGCGG(UAAC) A.europa.1 1350 AC-GCACUGGAGGGCCGAACC-CACGCCU(-GUUGAAAA)AGUCG|GGG- A.europa.1 1400 AUGAG-CUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAAAUAGC A.europa.1 1450 UGGUUCUCCCCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGGACGA---A| A.europa.1 1500 -UAC|CAUAGG|GGGUAG|AGC-ACUGU-UUCGGCUA-GG|-GGGUC(au A.europa.1 1550 ccc)GACUUACCAAACCGAU-GCAAACUCCGAA-UA-|CCU-A-U-G--A A.europa.1 1600 GUAC----U|AUC-CGGGAGACAGAC--UGC-GGGU(GCUAAC)GUCCGU A.europa.1 1650 -AGUC-AUGAGGA(-AAACAA-)UCCAGACCGCCAGCUAAG-GC|CCCC- A.europa.1 1700 AAAUU-AUAG-U-UAA-GUG------GGAAACGAUGUG-GGAAGGCAUA- A.europa.1 1750 GACAGCUAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA A.europa.1 1800 AGC(GUAAUA)GC|UCACUAGU-----CGAGU-CGG-CC--UGC|GCGGA A.europa.1 1850 AGAU-GUAA-CGGGGCUAAAACUAU-A|U|GCCGAAGCU|GCGG|augug A.europa.1 1900 cac----(aau--------------------------------------- A.europa.1 1950 -------------------------------------------------- A.europa.1 2000 -------------------------------------------------- A.europa.1 2050 -------------------------------------------------- A.europa.1 2100 -------------------------------------------------- A.europa.1 2150 -----------------------------------)-----gugcacgu- A.europa.1 2200 GG-UAGGGGAG|-----CGUU-CUG-UAA--------------------- A.europa.1 2250 -------------------------------------------------- A.europa.1 2300 --------------------------------G-CCGA-UGAAGGUG-U- A.europa.1 2350 A-UU(-GAGA-)AGU--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG A.europa.1 2400 AC|GUG-AGUA--ACGACAAAACGGG(UGAAAAA)CCCGUU|CGCU-GAA A.europa.1 2450 AGACCAAGGGUUCCAG-UCCAACG-(UUAAU)CG|G-GGCUGGGUGAGU| A.europa.1 2500 CGA|C-CCCUAAGGCGAGGCC(GAGA)-G-CGGU-AGUCGAUGG-GAAAU A.europa.1 2550 UGG-(UU-AAUAUU)C-CAAU|AC|uu-c-ug-ugu-aau---------- A.europa.1 2600 -------------------------------------------------- A.europa.1 2650 -------------------------------------------------- A.europa.1 2700 ------gcgau------gaga--gga-cggagaaaguua-aguc-a-|gc A.europa.1 2750 c-ugg(cg--uugg-u-ugu--)cc-aggu-|gaa--------------- A.europa.1 2800 -aggcaguaggcau---------gcau-cuuagg(ca-aa-u-)cc|g-- A.europa.1 2850 gggugcucu------------aug-cugaga----gcu|gau-|------ A.europa.1 2900 -----agcaag(-cuag--)uuuacuagu-------gaag--uggcugau A.europa.1 2950 acuaug---|cuuccaggaaa-agucuc-uaagcuuca---------g-u A.europa.1 3000 uacaca--gga|a|UCGUACCCUAAACC(GACACA)GG|UGG-UCAGGU- A.europa.1 3050 C-(GAGUA)GACCAAAGCGC||UUGAGAGAACUCUGCUG----------- A.europa.1 3100 ----AAGGAACUAGGCAAAAUGGUACCGUAAC(-UUCG)GGAGAAGGUAC A.europa.1 3150 |gcugcugac-ggu----------gauagga(-cuugc)uccuuga---- A.europa.1 3200 -----gcua-uuggcag-c|c(ACA)GAAACCAGGCC-CCUG|CAACU-- A.europa.1 3250 ---GU(UUAUUAAAA)ACAUAGCACUCUG|CAAACAC(GAAA------)G A.europa.1 3300 UGGACGU-AUAGGGUGUGA-UGCCUGCCCGGU|GCUG-GAA-GGUUAAUU A.europa.1 3350 GAUGGG----GU----uagc(g-uaa)gcgaa------GC------UCUU A.europa.1 3400 GAUCGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( A.europa.1 3450 UAA)GGUAGCG-AAAUUCCUU|CUCGGG(UAA-U)UCCGAC|CUGCACGA A.europa.1 3500 AUGGCGUAACGA-CUUCCCCUCUGUCUCCAGCAUCGGCUCA|GCGAAAUU A.europa.1 3550 |GAAUUCC-CCG(UGAAGAUC)GGGGGUACCCGCGGU-CAGACGGAAAGA A.europa.1 3600 CCCUAUGA|ACCU-UUACUGC|AGCUUUGCAGU|GGCAUCAGAGACAUUC A.europa.1 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGGC(GCCA)GUUCCGG A.europa.1 3700 UGGAGCCAUC-C-UUGAAAUACCACC|CUGA-CUGUUUCUGAU-GUCUAA A.europa.1 3750 -CCGAGG----CCUG(--UU-AGC)-CAGGUCCGG-GACCCUGCAUGGUG A.europa.1 3800 GGGCAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGUGUAAC)GGAGG A.europa.1 3850 C|N|C|GCGAUGGUGGGC|UCAGGUCGG(UCGGAAA)CCGACUGUC-GA| A.europa.1 3900 GU(G|CAAUG)GCAUAAGCCCGCCUGACUGUGAGAG(UGACAG)CUCGAU A.europa.1 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) A.europa.1 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UAGG|GAUAACAG|GC A.europa.1 4050 UGA--UCUCCCCCAAGA(G-UCC-ACA)UCGACGGGG-AGGU-UUGGCAC A.europa.1 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGC---A)-GGU A.europa.1 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG A.europa.1 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG A.europa.1 4250 G-G|UG-UUGGAGACUU|GA-|GAGGAUU-UGU--------------CCC A.europa.1 4300 (UAGUAC(GAGA)GGACC)GGGAUGA|ACAUACCUCUGGUGCACCGGU|U A.europa.1 4350 GUCGC(GC-CA-)CUGGCA-CAGCCGGGUAGCU-AAGUGUGGACGGGAUA A.europa.1 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGnnnnnnnn|nnnnnnnnnnnnn A.europa.1 4450 n|nn|nnnnnn(-nnn--)nnnnnn-nnn-nnnn|-nn|nnnnn-(nnnn A.europa.1 4500 nn-n)nnnnn-nnnnnnn|nnnnn|nnnnn-nnnnnnnn--(nnnn-)-- A.europa.1 4550 nnnnn|nn-nnnnn|n|nnnnnnnnnnnn-nnnnnnnnn|nnnnnn-nnn A.europa.1 4600 n-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.europa.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.europa.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.europa.1 4750 ~~~|||||| A.europa.2 0 -------------------------------------------------- A.europa.2 50 ----------------------------|----------AAUGAGCGCG- A.europa.2 100 A-UAAGGGCAUUCGGUGGAUG|CCUUGG|CACCAGG|AG|GC-GAUGAAA A.europa.2 150 GA|CGUG(GCAC-GC-)U|-GCG-AAAAGCCAUGGG|-GAGCC(G-CG-A A.europa.2 200 GCA-)GGCUUUG-AUC-CGUGGGUA|UCUGAAUGGG(GCAA)CCC|ACCC A.europa.2 250 A---(--------------------------------------------- A.europa.2 300 -------------------------------------------------- A.europa.2 350 -------------------------------------------------- A.europa.2 400 -------------------------------------------------- A.europa.2 450 ----gcga)---UGGGU-AUCA-UGUUCU(GA-AUACA--UA)GGG-ACA A.europa.2 500 -U-G--AGG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUAcCCCG A.europa.2 550 GAGGAAAAGACAUC(-AAUU--)GAGAU|UCU-GCUAGUAGU(GGCGA)G A.europa.2 600 CGA-ACG-CGGA-ACA-GGCC------------------------(---- A.europa.2 650 -)------------------------------------------------ A.europa.2 700 -------------------------------aguguucauuuuugaagaa A.europa.2 750 gcaGAAc-gga-a(u-ggaaa)g-uccggc|c(aua)gcGGG(UGAUAGC A.europa.2 800 )CCCGU-Augc-guagugucaggaaugauc-------------------- A.europa.2 850 ---------------cuuGAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC A.europa.2 900 UGAACAU-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----AUACUCCCU A.europa.2 950 GGUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G A.europa.2 1000 CACCCC(GACGA-)GGGGA--GUGAAA-UAG-ACCUGAAACCGA-AUGCC A.europa.2 1050 UACAA-G-CAGUCGGAGCCU--C---------------(----uuau--) A.europa.2 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| A.europa.2 1150 -GUCAGCGAGUUUC-UGUU-UGCAGC-AAGCUUAAGCC-(-G-UUA)-GG A.europa.2 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-CA)GGGCGA-------- A.europa.2 1250 --------------------------c-gaG-UUGCUGGCAGAA-GACCC A.europa.2 1300 GAAAC-CGA-GUGA-UCUAGCCAUGGC|CAGGCUGAAGGUGCGG(UAAC) A.europa.2 1350 AC-GCACUGGAGGGCCGAACC-CACGCCU(-GUUGAAAA)AGUCG|GGG- A.europa.2 1400 AUGAG-CUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAAAUAGC A.europa.2 1450 UGGUUCUCCGCGAAAUCUAU(-UGAG)GUAGACC|-GUCGAGUA----U| A.europa.2 1500 -UAC|CCCGGG|GGGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGGGC(cc A.europa.2 1550 aaa)GCCUUACCAAACCUAA-CCAAACUCCGAA-UA-|CCC-G-G-A--A A.europa.2 1600 GUAU---gA|GCU-CGGCAGACAGAC--AGU-GGGU(GCUAAG)GUCCAU A.europa.2 1650 -UGUC-GAGAGGG(-AAACAG-)CCCAGACCACCAGCUAAG-GC|CCCC- A.europa.2 1700 AAAUC-GUGG-C-UAA-GUG------GGAAAGGAUGUG-GGGAUUCCAA- A.europa.2 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA A.europa.2 1800 AGC(GUAAUA)GC|UCACUGGUcua--auaGA-AAC-CC--UGC|GCCGA A.europa.2 1850 AAAU-GUAA-CGGGGCUCAAGCCAC-G|U|GCCGAAGCU|GUGG|gugca A.europa.2 1900 uac----(uau--------------------------------------- A.europa.2 1950 -------------------------------------------------- A.europa.2 2000 -------------------------------------------------- A.europa.2 2050 -------------------------------------------------- A.europa.2 2100 -------------------------------------------------- A.europa.2 2150 -----------------------------------)-----guaugcgc- A.europa.2 2200 GG-UAGCGGAG|-----CGUUuCCG-UAG--------------------- A.europa.2 2250 -------------------------------------------------- A.europa.2 2300 --------------------------------G-UCUG-UGAAGGAG-Ac A.europa.2 2350 G-GG(-GUGA-)CCC--UCUCUGG|AGAUAU-CGGAAGUGCGAAUGC-UG A.europa.2 2400 AC|AUG-AGUA--GCGACAAACAGUG(CGAGAAA)CACUGU|CGCC-GAA A.europa.2 2450 AGUCCAAGGGUUCCUG-CGCAAGG-(UUAAU)CC|G-CGCAGGGUGAGC| A.europa.2 2500 CGG|C-CCCUAAGGCGAGGGC(GAAA)-G-CG-U-AGUCGAUGG--AACC A.europa.2 2550 GGg-(c--AAUAUU)--CCGG|GC|cu-g-cc-aga-------------- A.europa.2 2600 -------------------------------------------------- A.europa.2 2650 -------------------------------------------------- A.europa.2 2700 -------------------ag--uga-cgaau-gcaaua-uguu-g-|uc A.europa.2 2750 g-ggu(cuuaucggau-ug---)au-ccgg-|------------------ A.europa.2 2800 ----------------------------------(--------)--|--- A.europa.2 2850 --------------------------------------|----|------ A.europa.2 2900 -----------(-------)-----------------------cuuu-ug A.europa.2 2950 gcgc-----|auuccaggaaa-uagc-----------------------u A.europa.2 3000 cuggcauauag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACUGGU- A.europa.2 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACGAUGCUG----------- A.europa.2 3100 ----AAGGAACUAGGCAAAUUACUUGCGUAAC(-UUCG)GGAUAAGCAAG A.europa.2 3150 |accc------guc------------agugg(-gcaa-)ccauu------ A.europa.2 3200 ------ggc-----ggg-U|G(GCA)CAGACCAGGGG-GUAG|CGACU-- A.europa.2 3250 ---GU(UUAGUAAAA)ACACAGGGCUGUG|CGAAGUC(GAGA------)G A.europa.2 3300 ACGACGU-AUACGGCCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGA A.europa.2 3350 GGAGGU----GU--------(G-CAA)-----------GC------ACCG A.europa.2 3400 AAUUGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( A.europa.2 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA A.europa.2 3500 AUGGCGUAACGA-CUUCCCCGCUGUCUCCAGCAUCGGCUCA|GCGAAAUU A.europa.2 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUA-CCGCGGU-CAGACGGAAAGA A.europa.2 3600 CCCUAUGA|ACCU-UUACUGC|AGCUUUGCAGU|GGCAUCAGAGACAUUC A.europa.2 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGGC(GCCA)GUUCCGG A.europa.2 3700 UGGAGCCAUC-C-UUGAAAUACCACC|CUGA-CUGUUUCUGAU-GUCUAA A.europa.2 3750 -CCGAGG----CCUG(--UU-AGC)-CAGGUCCGG-GACCCUGCAUGGUG A.europa.2 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGUGUAAC)-GAGG A.europa.2 3850 C|G|C|GCGAUGGUGGGC|UCAGGUCGG(UCGGAAA)CCGACUGUC-GA| A.europa.2 3900 GU(G|CAAUG)GCAUAAGCCCGCCUGACUGUGAGAG(UGACAG)CUCGAU A.europa.2 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) A.europa.2 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UAGG|GAUAACAG|GC A.europa.2 4050 UGA--UCUCCCCCAAGA(G-UCC-ACA)UCGACGGGG-AGGU-UUGGCAC A.europa.2 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGC---A)-GGU A.europa.2 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG A.europa.2 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG A.europa.2 4250 G-G|UG-UUGGAGACUU|GA-|GAGGAUU-UGU--------------CCC A.europa.2 4300 (UAGUAC(GAGA)GGACC)GGGAUGA|ACAUACCUCUGGUGCACCGGU|U A.europa.2 4350 GUCGC(GC-CA-)G--GCA-CAGCCGGGUAGCU-AAGUGUGGACGGGAUA A.europa.2 4400 ACCGCU(GAAAGHUUCUA)AGCGGGAAN~~~~~~~~|~~~~~~~~~~~~~ A.europa.2 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ A.europa.2 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ A.europa.2 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ A.europa.2 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.europa.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.europa.2 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ A.europa.2 4750 ~~~|||||| R.ricketts 0 -------------------------------------------------- R.ricketts 50 ----------------------------|---------nnnnnnnnnnn- R.ricketts 100 n-nnnnnnnnnnnnnnnnnnn|nnnnnn|nnnnnnn|nn|nn-nnnnnnn R.ricketts 150 nn|nnnn(nUAC-GC-)U|-GCG-AUAAGCUUCGGG|-GAGUU(G-CG-A R.ricketts 200 AUA-)AACUUCG-AUC-CGAAGAUU|UCCGAAUAGG(GAAA)CCU|ACCU R.ricketts 250 AA--(--------------------------------------------- R.ricketts 300 -------------------------------------------------- R.ricketts 350 -------------------------------------------------- R.ricketts 400 -------------------------------------------------- R.ricketts 450 ----uuua)--UUAGGU-AUUG-UAUAGU(GA-AUACA--UA)GCU-AUA R.ricketts 500 -U-G--AGG-C-AAAC|CC-AGCGAACU|GA(AAUA)UCUAAGUA-GCUG R.ricketts 550 GAGGAAAGGACAUC(-AACC--)GAGAC|UCC-GUUAGUAGU(GACGA)G R.ricketts 600 CGA-AUG-CGGA-CCA-GGCC------------------------(---- R.ricketts 650 -)------------------------------------------------ R.ricketts 700 -------------------------------aguggcuucaaaaaaauaa R.ricketts 750 cuaAAAc-aac-a(u-ggaaa)g-guugac|c(aua)gaGGG(UGAUAGU R.ricketts 800 )CCCGU-Auag-guaaaaaguuugaaguc--------------------- R.ricketts 850 ---------------cuuGAGUAAGGCGGGA(CACGUG-AAA)UCCUGUC R.ricketts 900 UGAACAU-AGG-GG(GACCAC)CC-UCU-AAGCCUAA----GUACUCUCU R.ricketts 950 AGUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.ricketts 1000 UACCCC(GACAA-)GGGGA--GUGAAA-UAGUAUCUGAAACCAA-AUGCU R.ricketts 1050 UACAA-G-CAGUCGGAGCAA--Gc-gua----------(----uuua--) R.ricketts 1100 ----------uauguC-UUGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.ricketts 1150 -GUCAGCGACUUAG-UUUA-UCUAGC-AAGCUUAAGCC-(-G-UUA)-GG R.ricketts 1200 U-GUAGGCGUAGC(GAAA-)GCGAGUCU(GNA-UA)GGGCGu-------- R.ricketts 1250 --------------------------u-uAG-UUAGAUGAAUUA-GACCC R.ricketts 1300 GAAAC-CGG-GUGA-UCUAGCCAUGGC|CAGGUUGAAAGCGGAG(UAAA) R.ricketts 1350 AU-CCACUGAAGGACCGAACC-CACUACU(-GUUGAAAA)AGUAG|GGG- R.ricketts 1400 AUGAG-CUGUGGUUAGGGGU(-GNAAG)GCCAAUCAAACUCGGAUAUAGC R.ricketts 1450 UGGUUCUCUGCGAAAUCUAU(-UUAG)GUAGAGC|-GUUAUAGCg--aU| R.ricketts 1500 -UAC|CAUCGA|AGGUAG|AGC-ACUGA-AUGAGCUA-GG|-GGGUC(cc R.ricketts 1550 aca)GACUUACCAAACUCAA-UCAAACUCCGAA-UG-|UCG-A-U-G--A R.ricketts 1600 GUAC----A|GCA-UAGCAGACAGAC--UAU-GGGU(GCUAAG)GUCCAU R.ricketts 1650 -AGUC-GAGAGGG(-AAAAAG-)CCCAGACCGCCAUCUAAG-GU|CCCU- R.ricketts 1700 AAAUC-AUGA-C-UAA-GUG------UUAAAGGAUGUG-AGAAGACCAA- R.ricketts 1750 AACAACUAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA R.ricketts 1800 AGC(GUAAUA)GC|UCACUAGUcuaaaUAAGU-UUU-CU--UGC|GCCAA R.ricketts 1850 CAAU-GUAA-CGGGGCUCAAGUCAU-G|U|ACCGAAGAU|GCGG|guuua R.ricketts 1900 ugc----(auuug------------------------------------- R.ricketts 1950 -------------------------------------------------- R.ricketts 2000 -------------------------------------------------- R.ricketts 2050 -------------------------------------------------- R.ricketts 2100 -------------------------------------------------- R.ricketts 2150 -----------------------------------)-----gcauaaau- R.ricketts 2200 GG-UAGCGGAG|-----CGUU-CCG-UAA--------------------- R.ricketts 2250 -------------------------------------------------- R.ricketts 2300 --------------------------------G-CCUG-CGAAGGUG-A- R.ricketts 2350 A-CC(-GUAA-)GGU--UUGCUGG|AGGUAU-CGGAAGUGAGAAUGC-UG R.ricketts 2400 AC|AUA-AGUA--GCGAUAAAGAAUG(UNAGAAA)CAUUCU|CGCC-GAA R.ricketts 2450 AGUCCAAGGGUUCUUG-CGUAAAG-(UUAUU)CU|G-CGCAAGGUUAGU| R.ricketts 2500 CGG|C-CCCUAAGAUGAGGCU(GAAA)-G-GCGU-AGUCGAUGG-GAAUC R.ricketts 2550 AGG-(UU-AAUAUU)C-CUGA|AC|cu-g-aa-gga-------------- R.ricketts 2600 -------------------------------------------------- R.ricketts 2650 -------------------------------------------------- R.ricketts 2700 -------------------ug--uga-cgaaa--auaguaaauu-g-|ua R.ricketts 2750 c-agu(cuuauuggau-ug---)au-ugug-|------------------ R.ricketts 2800 ----------------------------------(--------)--|--- R.ricketts 2850 --------------------------------------|----|------ R.ricketts 2900 -----------(-------)-----------------------cagu-ga R.ricketts 2950 auau-----|uuuccaggaaa-ua---------------------aca-c R.ricketts 3000 cuucauuauag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACAGGU- R.ricketts 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACGAUGCUG----------- R.ricketts 3100 ----AAGGAACUAGGCAAAUUGCAUCUGUAAC(-UUCG)GAAGAAAGAUG R.ricketts 3150 |accu------gua------------uaugg(-gcaa-)ccaug------ R.ricketts 3200 ------ugc-----agg-U|G(GCA)CAAGCUAGGGG-GUAG|CGACU-- R.ricketts 3250 ---GU(UUAUUAAAA)ACACAGGGCUCUG|CAAAGUC(AAUA------)G R.ricketts 3300 ACGAUGU-AUAGGGUCUGA-CGCCUGCCCAGU|GCUG-GAA-GAUUAAAA R.ricketts 3350 GGAGGG----GU--------(G-CAA)----------AGC------UCUG R.ricketts 3400 AAUUGAAGUC|CCAGUGAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( R.ricketts 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA R.ricketts 3500 AUGGCGUAACGA-UUUCCCCACUGUCUCCAGUAUCGACUCA|GCGAAAUU R.ricketts 3550 |GAAUUCU-CCG(UGAAGAUG)CGGAGUUCCCGCGGU-CAGACGGAAAGA R.ricketts 3600 CCCCGUGA|ACCU-UUACUAU|AGCUUUGCACU|GGUGUUAGGAAUCAGA R.ricketts 3650 UGUGCAGGAUAGGUGGGAGACUACGAAG--CGAAGGC(GUCA)GCCUUUG R.ricketts 3700 UGGAGUCACC-C-UUGAGAUACCACC|CUUU-UGGUGCUUGAC-AUCUAA R.ricketts 3750 -CCGAGG----UCCU(-UGA-AUC)-AGGAUCCGA-GACAAUGCAUGGUG R.ricketts 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGAGUAAC)GGAGG R.ricketts 3850 C|G|C|GCGAUGGUUAGC|UCAGGUUGG(UCGGAAA)UCAACUUUUaGA| R.ricketts 3900 GU(G|CAAUG)GCAUAAGCUAGCCUGACUGCGAGUC(UGACAA)AACGAG R.ricketts 3950 CAGAGAC(RAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(AGUGGA) R.ricketts 4000 AGG|GCCAUCGCUCAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC R.ricketts 4050 UGA--UGAUUUCCAAGC(G-UCC-AUA)GCGACGAAA-UCGU-UUGGCAC R.ricketts 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU R.ricketts 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG R.ricketts 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG R.ricketts 4250 G-G|UG-UAGGAAGUUU|GA-|GAGGAUC-UGC--------------CUU R.ricketts 4300 (UAGUAC(GAGA)GGACC)GAGGUGG|ACGUACCCCUGGUGGACCAGU|U R.ricketts 4350 GUCGU(GC-CA-)ACGGCA--AGCUGGGUAGCU-AAGUACGGAAGGGAUA R.ricketts 4400 ACUGCU(GAAUGCAUCUA)AGCAGGAAACCCACCUC|AAAACUAGACUUC R.ricketts 4450 C|CC|------(------)--------aU-UAGA|-GC|CGUGG-(AAGA R.ricketts 4500 CC-A)CCACG-UUGAUAG|GUCGG|GUGUG-GAAGCACA--(GUAA-)-- R.ricketts 4550 UGUGU|GU-AGCUA|A|CCGAUACUAAUA-GCUCGAUUG|AUUUAC-UUU R.ricketts 4600 G-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.ricketts 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.ricketts 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.ricketts 4750 ~~~|||||| R.bellii 0 -------------------------------------------------- R.bellii 50 ----------------------------|---------nnnnnnnnnnn- R.bellii 100 n-nnnnnnnnnnnnnnnnnnn|nnnnnn|nnnnnnn|nn|nn-nnnnnnn R.bellii 150 nn|nnnn(nUAC-GC-)U|-GCG-AUAAGCUUCGGG|-GAGCU(G-CG-A R.bellii 200 AUA-)AGCUUUG-AUC-CGAAGAUU|UCCGAAUGGG(GGAA)CCC|ACCU R.bellii 250 AA--(--------------------------------------------- R.bellii 300 -------------------------------------------------- R.bellii 350 -------------------------------------------------- R.bellii 400 -------------------------------------------------- R.bellii 450 ----uuua)--UUAGGU-AUUG-UAUAGU(GA-AUACA--UA)GCU-AUA R.bellii 500 -U-G--AGG-C-AAAC|CC-AGCGAACU|GA(AAUA)UCUAAGUA-GCUG R.bellii 550 GAGGAAAGGACAUC(-AACC--)GAGAC|UCC-GUUAGUAGU(GACGA)G R.bellii 600 CGA-AUG-CGGA-CCA-GGCC------------------------(---- R.bellii 650 -)------------------------------------------------ R.bellii 700 -------------------------------aguggcuucaaaaaaauaa R.bellii 750 cuaAAAc-aac-a(u-ggaaa)g-guugac|c(gua)gaGGG(UGAUAGU R.bellii 800 )CCCGU-Auag-guaaaaaguuugaaguc--------------------- R.bellii 850 ---------------cuuGAGUAAGGCGGGA(CACGUG-AAA)UCCUGUC R.bellii 900 UGAACAU-AGG-GG(GACCAC)CC-UCU-AAGCCUAA----GUACUCUCU R.bellii 950 AGUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.bellii 1000 UACCCC(GACAA-)GGGGA--GUGAAA-UAGUAUCUGAAACCAA-AUGCU R.bellii 1050 UACAA-G-CAGUCGGAGCAA--Gc-a------------(----uuua--) R.bellii 1100 ------------uguC-UUGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.bellii 1150 -GUCAGCGACUUAG-UUUA-UCUAGC-AAGCUUAAGCC-(-G-UUA)-GG R.bellii 1200 U-GUAGGCGUAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGacu------ R.bellii 1250 --------------------------a-uAG-UUAGAUGAAUUA-GACCC R.bellii 1300 GAAAC-CGA-GUGA-UCUAGCCAUGGC|CAGGUUGAAAGCGGAG(UAAA) R.bellii 1350 AU-CCGCUGAAGGACCGAACC-CACUACU(-GUUGAAAA)AGUAG|GGG- R.bellii 1400 AUGAG-CUGUGGUUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAUAUAGC R.bellii 1450 UGGUUCUCUGCGAAAUCUAU(-UUAG)GUAGAGC|-GUUAUAGCg--gU| R.bellii 1500 -UAC|CAUCGG|AGGUAG|AGC-ACUGA-AUGAGCUA-GG|-GGGUC(cc R.bellii 1550 aca)GACUUACCAAACUCAA-UCAAACUCCGAA-UG-|CCG-A-U-G--A R.bellii 1600 GUAU----A|GCA-UAGCAGACAGAC--UAU-GGGU(GCUAAG)GUCCAU R.bellii 1650 -AGUC-GAGAGGG(-AAAAAG-)CCCAGACYGCCAUCUAAG-GU|CCCU- R.bellii 1700 AAAUC-AUGA-C-UAA-GUG------UUAAAGGAUGUG-AGAAGACCAA- R.bellii 1750 AACAACUAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA R.bellii 1800 AGC(GUAAUA)GC|UCACUAGUcuaaaUAAGU-UUU-CU--UGU|GCCAA R.bellii 1850 CAAU-GUAA-CGGGGCUCAAGUCAU-G|U|ACCGAAGAU|GCGG|auuca R.bellii 1900 cac----(auuug------------------------------------- R.bellii 1950 -------------------------------------------------- R.bellii 2000 -------------------------------------------------- R.bellii 2050 -------------------------------------------------- R.bellii 2100 -------------------------------------------------- R.bellii 2150 -----------------------------------)-----gugugagu- R.bellii 2200 GG-UAGCGGAG|-----CGUU-CCG-UAA--------------------- R.bellii 2250 -------------------------------------------------- R.bellii 2300 --------------------------------G-CCUG-UGAAGGUG-A- R.bellii 2350 A-CC(-GUAA-)GGU--UUGCUGG|AGGUAU-CGGAAGUGAGAAUGC-UG R.bellii 2400 AC|AUA-AGUA--GCGAUAAAGAAUG(CGAGAAA)CAUUCU|CGCC-GAA R.bellii 2450 AGUCCAAGGGUUCUUG-CGUAAAG-(UUAAU)CU|G-CGCAAGGUUAGU| R.bellii 2500 CGG|U-CCCUAAGGUGAGGCU(GAAA)-G-GCGU-AAUCGAUGG-GAAUC R.bellii 2550 AGG-(UU-AAUAUU)C-CUGA|AC|cu-g-aa-gga-------------- R.bellii 2600 -------------------------------------------------- R.bellii 2650 -------------------------------------------------- R.bellii 2700 -------------------ug--uga-cgaaa--guaguaaguu-g-|ua R.bellii 2750 c-agu(cuuauuggau-ug---)au-ugug-|------------------ R.bellii 2800 ----------------------------------(--------)--|--- R.bellii 2850 --------------------------------------|----|------ R.bellii 2900 -----------(-------)-----------------------cagc-ga R.bellii 2950 auau-----|uuuccaggaaa-ua---------------------aca-c R.bellii 3000 cuucauuauag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACAGGU- R.bellii 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACGAUGCUG----------- R.bellii 3100 ----AAGGAACUAGGCAAAUUGCAUCUGUAAC(-UUCG)GAAGAAAGAUG R.bellii 3150 |accc------aca------------uaugg(-gcaa-)ccauu------ R.bellii 3200 ------ugu-----ggg-U|G(GCA)CAAGCUAGGGG-GUAG|CGACU-- R.bellii 3250 ---GU(UUAUUAAAA)ACACAGGGCUCUG|CAAAGUC(AAUA------)G R.bellii 3300 ACGAAGU-AUAGGGUCUGA-CGCCUGCCCAGU|GCUG-GAA-GAUUAAGA R.bellii 3350 GGAGGG----GU--------(G-CAA)----------AGC------UCUG R.bellii 3400 AAUUGAAGUC|CCAGUGAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( R.bellii 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA R.bellii 3500 AUGGCGUAACGA-UUUCCCCGCUGUCUCCAGUAUCGACUCA|GCGAAAUU R.bellii 3550 |GAAUUCU-CCG(UGAAGAUG)CGGAGUUCCCGCGGU-CAGACGGAAAGA R.bellii 3600 CCCCGUGA|ACCU-UUACUAU|AGCUUUGCACU|GGUGUUAGGAAUCAAA R.bellii 3650 UGUGCAGGAUAGGUGGAAGACUAUGAAG--CAGAGGC(GUCA)GCCUUUG R.bellii 3700 UGGAGUCACC-C-UUGAGAUACCACC|CUUU-UGGUUCUUGAU-AUCUAA R.bellii 3750 -CCGAGA----CCCU(-UGA-AUC)-AGGGUCCGA-GACAAUGCAUGGUG R.bellii 3800 GG-UAGUUUGACUG(GGG)CGGUA|GCCUCC(CAA-AGAGUAAC)GGAGG R.bellii 3850 C|G|U|GCGAUGGUUAGC|UCAGGUUGG(UCGGAAA)UCAACUUUUaGA| R.bellii 3900 GU(G|CAAUG)GCAUAAGCUAGCCUGACUGCGAGUC(UGACAA)GACGAG R.bellii 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(AGUGGA) R.bellii 4000 AGG|GCCAUCGCUCAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC R.bellii 4050 UGA--UGAUUUCCAAGC(G-UCC-AUA)GCGACGAAA-UCGU-UUGGCAC R.bellii 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU R.bellii 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG R.bellii 4200 GUUUA-GAAC|GUC(GUGA)-GAUAGUU-CGGU-CCCUAU-CU|GCCGUG R.bellii 4250 G-G|UG-UAGGAAGUUU|GA-|GAGGAUC-UGC--------------CUU R.bellii 4300 (GAGUAC(GAGA)GGACC)GAGGUGG|ACGUACCCCUGGUGGACCAGU|U R.bellii 4350 GUCGU(GC-CA-)ACGGCA--AGCUGGGUAGCU-AAGUACGGAAGGGAUA R.bellii 4400 ACCGCU(GAAUGCAUCUA)AGCAGGAAACCCACCUC|AAAACUAGACUUC R.bellii 4450 C|CC|------(------)--------aU-UAGA|-GC|CGUGG-(AAGA R.bellii 4500 CC-A)CCACG-UUGAUAG|GUCAG|GUGUG-GAAGCACA--(GUAA-)-- R.bellii 4550 UGUGU|GU-AGCUA|A|CUGAUACUAAUA-GCUCGAUUG|AUUUAC-UUU R.bellii 4600 G-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.bellii 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.bellii 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.bellii 4750 ~~~|||||| R.prowazek 0 -------------------------------------------------- R.prowazek 50 ----------------------------|-------UAAAGUAAAUGUA- R.prowazek 100 A-UAAGGGCAUUUGGUGGAUG|CCUUGG|nnnnnnn|nn|nn-nnnnnnn R.prowazek 150 nn|nnnn(nUAC-GU-)U|-GCG-AUAAGCUUCGGG|-GAGCU(G-CG-A R.prowazek 200 AUA-)AGCUUYG-AUC-CGAAGAUU|UCCGAAURGG(GAAA)CCU|ACCU R.prowazek 250 AA--(--------------------------------------------- R.prowazek 300 -------------------------------------------------- R.prowazek 350 -------------------------------------------------- R.prowazek 400 -------------------------------------------------- R.prowazek 450 ----uuua)--UUAGGU-AUUG-UAUAGU(GA-AUACA--UA)GCU-AUA R.prowazek 500 -U-G--AGG-C-GAAC|CC-AGCGAACU|GA(AAUA)UCUAAGUA-GCUG R.prowazek 550 GAGGAAAGGACAUC(-AACC--)GAGAC|UCC-GUUAGUAGU(GACGA)G R.prowazek 600 CGA-ACG-CGGA-CCA-GGCC------------------------(---- R.prowazek 650 -)------------------------------------------------ R.prowazek 700 -------------------------------agugacuucaaaaaaauaa R.prowazek 750 cuaAAAc-aau-a(u-ggaaa)g-auugac|c(aua)gaGGG(UGAUAGU R.prowazek 800 )CCCGU-Auag-guaaaaaguuugaaguu--------------------- R.prowazek 850 ---------------uuuGAGUAAGGCGGGA(CACGUG-AAA)UCCUGUU R.prowazek 900 UGAACAU-AGG-GG(GACCAC)CC-UCU-AAGCCUAA----GUACUCUCU R.prowazek 950 AGUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.prowazek 1000 UACCCC(GACAA-)GGGGA--GUGAAA-UAGUAUCUGAAACCAA-AUGCU R.prowazek 1050 UACAA-G-CAGUCGGAGCAA--Gc-aua----------(----uuua--) R.prowazek 1100 ----------uauguC-UUGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.prowazek 1150 -GUCAGCGACUUAG-UUUA-UCUAGC-AAGCUUAAGCC-(-G-UUA)-GG R.prowazek 1200 U-GUAGGCGUAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGu-------- R.prowazek 1250 --------------------------u-uAG-UUAGAUGAAUUA-GACCC R.prowazek 1300 GAAAC-CGG-GUGA-UCUAGCCAUGGC|CAGGUUGAAAGCGGAG(UAAA) R.prowazek 1350 AU-CCGCUGAAGGACCGAACC-CACUACU(-GUUGAAAA)AGUAG|GGG- R.prowazek 1400 AUGAG-CUGUGGUUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAUAUAGC R.prowazek 1450 UGGUUCUCCGCGAAAUCUAU(-UUAG)GUAGAGC|-GUUAUAGCg--aU| R.prowazek 1500 -UAC|CAUCGA|AGGUAG|AGC-ACUGA-AUGAGCUA-GG|-GGGUU(cu R.prowazek 1550 aca)GACUUACCAAACUCAA-UCAAACUCCGAA-UG-|UCG-A-U-G--A R.prowazek 1600 GUAC----A|GCA-UAGCAGACAGAC--UAU-GGGU(GCUAAG)GUCCAU R.prowazek 1650 -AGUC-GAGAGGG(-AAAAAG-)CCCAGACCGCCAUCUAAG-GU|CCCU- R.prowazek 1700 AAAUC-AUGA-C-UAA-GUG------UUAAAGGAUGUG-AGAAGACCAA- R.prowazek 1750 AACAACUAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA R.prowazek 1800 AGC(GUAAUA)GC|UCACUAGUcuaaaUAAGU-UUU-YU--UGC|GCCAA R.prowazek 1850 CAAU-GUAA-CGGGGCUCAAGUCAU-G|U|ACCGAAGAU|GCGG|auuua R.prowazek 1900 ugc----(auuua------------------------------------- R.prowazek 1950 -------------------------------------------------- R.prowazek 2000 -------------------------------------------------- R.prowazek 2050 -------------------------------------------------- R.prowazek 2100 -------------------------------------------------- R.prowazek 2150 -----------------------------------)-----gcauaaau- R.prowazek 2200 GG-UAGCGGAG|-----CGUU-CCG-UAA--------------------- R.prowazek 2250 -------------------------------------------------- R.prowazek 2300 --------------------------------G-CCUG-UGAAGGUA-A- R.prowazek 2350 A-CU(-GUAA-)GGU--UUGCUGG|AGGUAU-CGGAAGUGAGAAUGC-UG R.prowazek 2400 AC|AUA-AGUA--GCGAUAAAGAAUG(UGAGAAA)CAUUCU|CGCC-GAA R.prowazek 2450 AGUCCAAGGGUUCUUG-CGUAAAG-(UUAAU)CU|G-CGCAAGGUUAGU| R.prowazek 2500 CGG|C-CCCUAAGGUGAGGCU(GAAA)-G-GCGU-AAUCGAUGG-GAAUC R.prowazek 2550 AGG-(UU-AAUAUU)C-CUGA|AC|cu-a-aa-gga-------------- R.prowazek 2600 -------------------------------------------------- R.prowazek 2650 -------------------------------------------------- R.prowazek 2700 -------------------ug--uga-cgaaa--auaguaaauu-g-|ua R.prowazek 2750 u-agu(cuuauuggau-ug---)au-ugug-|------------------ R.prowazek 2800 ----------------------------------(--------)--|--- R.prowazek 2850 --------------------------------------|----|------ R.prowazek 2900 -----------(-------)-----------------------cagu-ga R.prowazek 2950 auau-----|uuuccaggaaa-ua---------------------gca-c R.prowazek 3000 cuuuauuauag|a|CCGUACCCAAAACC(GACACA)GG|UGG-ACAGGU- R.prowazek 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACGAUGCUG----------- R.prowazek 3100 ----AAGGAACUAGGCAAAUUACAUCUGUAAC(-UUCG)GAAGAAAGAUG R.prowazek 3150 |accu------gug------------uaugg(-gcaa-)ccaua------ R.prowazek 3200 ------ugc-----agg-U|G(GCA)CAAGUUAGGGG-GUAG|CGACU-- R.prowazek 3250 ---GU(UUAUUAAAA)ACACAGGGCUCUG|CAAAGUC(AAUA------)G R.prowazek 3300 ACGACGU-AUAGGGUCUGA-CGCCUGCCCAGU|GCUG-GAA-GAUUAAAA R.prowazek 3350 GGAGGG----GU--------(G-UAA)----------AGC------UCUA R.prowazek 3400 AAUUGAAGUC|CCAGUGAAC|-GGC|GGCCGU(AACUAUG)ACGGUC|C( R.prowazek 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA R.prowazek 3500 AUGGCGUAACGA-UUUCCCCACUGUCUCCAGUAUCGACUCA|GCGAAAUU R.prowazek 3550 |GAAUUCU-CCG(UGAAGAUG)CGGAGUUCCCGCGGU-CAGACGGAAAGA R.prowazek 3600 CCCCGUGA|ACCU-UUACUAU|AGCUUUGCACU|GGUAUUAGAAAUCAAA R.prowazek 3650 UGUGCAGGAUAGGUGGGAGACUACGAAG--CAGAGGC(GUCA)GCCUUUG R.prowazek 3700 UGGAGUCACU-C-UUGAGAUACCACC|CUUU-UGGUUUUUGAU-AUCUAA R.prowazek 3750 -CCGAGA----CUCU(-UGA-AUC)-AGGGUCCGA-GACAAUGCAUGGUG R.prowazek 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-ARAGUAAC)GGAGG R.prowazek 3850 C|G|C|GCGAUGGUUAGC|UCAGGUUGG(UCGGAAA)UCAACUUUUaGA| R.prowazek 3900 GU(G|CAAUG)GCAUAAGCUAGCCUGACUGCGAGUC(UGACAA)GACGAG R.prowazek 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUUCCG(AGUGGA) R.prowazek 4000 AGG|GCCAUCGCUCAAC|GAAUAAAAGGUACUC|CGGG|GAUAACAG|GC R.prowazek 4050 UGA--UGAUUUCCAAGC(G-UCC-AUA)GCGACGAAA-UCGU-UUGGCAC R.prowazek 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU R.prowazek 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG R.prowazek 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG R.prowazek 4250 G-G|UG-UAGGAAGUUU|GA-|GAGGAGC-UGC--------------CUU R.prowazek 4300 (UAGUAC(GAGA)GGACC)GAGGUGG|ACGUACCCCUGGUGGACCAGU|U R.prowazek 4350 GUCGU(GC-CA-)ACGGCA--AGCUGGGUAGCU-AAGUACGGAAGGGAUA R.prowazek 4400 ACUGCU(GAAUGCAUCUA)AGCAGGAAACCCACCUC|AAAACUAGACUUC R.prowazek 4450 C|CC|------(------)--------aU-UAGA|-GC|CGUGG-(AAGA R.prowazek 4500 CC-A)CCACG-UUGAUAG|GUCGG|GUGUG-GAAGCACA--(GUAA-)-- R.prowazek 4550 UGUGU|GU-AGCUA|A|CCGAUACUAAUA-GCUCGAUUG|AUUUAC-UUU R.prowazek 4600 G-------|cugugagauua~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.prowazek 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.prowazek 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.prowazek 4750 ~~~|||||| Wol.pipien 0 -------------------------------------------------- Wol.pipien 50 ----------------------------|----------AAAUAAAUUA- Wol.pipien 100 U-UAAGAGCACUUGAUGGAUG|CCUUGG|CGUUAAG|AG|GC-GAUGGAG Wol.pipien 150 GA|CGUG(GCAG-GCG)U|GGCG-AUAAGCAGCGGG|-AAAUU(G-UC-A Wol.pipien 200 ACA-)AAUUUUG-AUC-CGCAGAUU|UCCGAAUGGG(GAAA)CCC|AACU Wol.pipien 250 Agc-(--------------------------------------------- Wol.pipien 300 -------------------------------------------------- Wol.pipien 350 -------------------------------------------------- Wol.pipien 400 -------------------------------------------------- Wol.pipien 450 ----uua-)-gcUAGUU-Auau---auac(----uaa-----)gua-u-- Wol.pipien 500 -a-u-aaAG-C-AAAC|UU-GGUGAACU|GA(AAUA)UCUAAGUA-GCCG Wol.pipien 550 AAGGAAAAGAAAUC(-AACC--)GAGAU|UCU-GUUAGUAGU(GACGA)G Wol.pipien 600 CGA-AAG-CGGA-AAA-GGCU------------------------(---- Wol.pipien 650 -)------------------------------------------------ Wol.pipien 700 -------------------------------agugauuuaaaaauaagaa Wol.pipien 750 uuaGAAu-acu-c(u-ggaaa)u-gguaac|c(aua)gaAGG(UGAUAGU Wol.pipien 800 )CCUGU-Acaa-auagaaaguuuuuaaauc-------------------- Wol.pipien 850 ---------------cuuGAGUAGAGCGGGG(CACGUG-AAA)UCCUGUU Wol.pipien 900 UGAAUAU-GGG-GG(GACCAU)CC-UCC-AAGCCUAA----AUACUCCUU Wol.pipien 950 AGCGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Wol.pipien 1000 ANACCN(--NNA-)GGGGA--GUGAAA-UAGAAUCUGAAAUCAA-GUGCU Wol.pipien 1050 UACAA-A-CAGUUGGAGCUC--ua-uaucaa-------(----uuua--) Wol.pipien 1100 ------uugauauuua-gaGUGACAGCGUACCU(UUU-GCAU|A)AUGG| Wol.pipien 1150 -GUCAGCGAGUUAA-UCUA-UGAAGC-AAGCUUAAGAA-(-G-AUA)-GG Wol.pipien 1200 U-GUAGGCGUAGC(GAAA-)GCAAGUCU(GAA-UA)GGGCGU-------- Wol.pipien 1250 --------------------------u-uAG-UUUUAUGGAUUA-GACCC Wol.pipien 1300 GAAAC-CAA-GUGA-UCUAGUCAUGAC|CAGAUUGAAGGUAUGG(UAAA) Wol.pipien 1350 AC-AUACUGAAGGAUCGAACC-AGUUAAU(-GUUGCAAC)AUUAU|UGG- Wol.pipien 1400 AUGAG-UUGUGAUUAGGGGU(-GAAAG)GCCAAUCgggcua--------- Wol.pipien 1450 --------------------(-----)gagcggc|cgcucu------aG| Wol.pipien 1500 -CCC|UGUUGG|GGGUAG|AGC-ACUGG-AUAGACUA-GG|-GGGAU(uc Wol.pipien 1550 auc)AUCUUACCAAAUCUAA-CCAAACUCCGAA-UA-|CCA-A-U-A-au Wol.pipien 1600 uaau----u|aua-CAGCAGACACAC--UAU-GGGU(GCUAA-)GUCCGU Wol.pipien 1650 -GGUG-GAAAGGG(-AAACAG-)CCCAGAUCACUAUCUAAG-GU|CCCA- Wol.pipien 1700 AAAUU-ACAG-C-UAA-GUG------GGAAAGGAAGUA-GAAAAACCAU- Wol.pipien 1750 UACAGCUAGGAGGUUGGC(UUGGAAGCA)GCCAU-CCU|U(UAA)A|CAA Wol.pipien 1800 AGC(GUAACA)GC|UCACUUGUcuaaaUAAGU-UUU-UC--UGC|GCCGA Wol.pipien 1850 AAAU-GUAC-CGGGGCUAAAGCUGU-A|U|ACCGAAGG-|GUGG|gugcu Wol.pipien 1900 uauugau(uucg-------------------------------------- Wol.pipien 1950 -------------------------------------------------- Wol.pipien 2000 -------------------------------------------------- Wol.pipien 2050 -------------------------------------------------- Wol.pipien 2100 -------------------------------------------------- Wol.pipien 2150 -----------------------------------)-auuaauaggugc- Wol.pipien 2200 GG-UNG---GA|----gC-UU-CCG-UAa--------------------- Wol.pipien 2250 -------------------------------------------------- Wol.pipien 2300 --------------------------------G-UCUG-UGAAGGUG-G- Wol.pipien 2350 U-UU(-GUAA-)AAA--CUGCUGG|AGAUAU-CGGAAGUGAGAAUNC-UG Wol.pipien 2400 AC|AUA-AGUA--GCGUAAAAGAGUG(UGAAAAA)CACUCU|CACC-AAA Wol.pipien 2450 AAUCUAANNNNNCCCA-CGUUAAG-(UUAAU)CU|A-CGUAGGGUUAGU| Wol.pipien 2500 CGG|U-UCCUAAGGCGAGUCC(GUAA)aG-GAGU-AGUCGAUGG-CAAUU Wol.pipien 2550 AGG-(UU-AAUAUU)C-CUAA|AC|cu-c-uu-aag-u------------ Wol.pipien 2600 -------------------------------------------------- Wol.pipien 2650 -------------------------------------------------- Wol.pipien 2700 --------------------g--uga-cgggu--uuugu-auuu-g-|ua Wol.pipien 2750 uaggu(cugauuggau-ug---)aucuaug-|------------------ Wol.pipien 2800 ----------------------------------(--------)--|--- Wol.pipien 2850 --------------------------------------|----|------ Wol.pipien 2900 -----------(-------)-----------------------cuua-aa Wol.pipien 2950 agaa-----|gcuggaggaaa-uagnacuua----------------u-a Wol.pipien 3000 uuuau---gag|g|CUGUACCGUAAACC(GACACU)GG|UGG-AUGAGU- Wol.pipien 3050 A-(GAGUA)UACUAAGGUG-||UUGAAAGAAUGAUGUUG----------- Wol.pipien 3100 ----AAGGAACUCGGNAAAUUAUACCUGUAAC(-UUCG)GAAGAAGGGUA Wol.pipien 3150 |accu------gcu------------uuuag(-gcaa-)cuaua------ Wol.pipien 3200 ------agu-----agg-U|G(GCA)CAAAAUAGGGA-GUAG|CGACU-- Wol.pipien 3250 ---GU(UUACUAAAA)ACACAGGACUCUG|CAAACAC(GUAA------)G Wol.pipien 3300 UGGAAGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAUA Wol.pipien 3350 GGAGGG----GU--------(G-CAA)-----------GC------UCUG Wol.pipien 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|-GCCGU(AACACUG)ACGGCC|C( Wol.pipien 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA Wol.pipien 3500 AUGGCGUAACGA-UUUCUCCACUGUCUCCAACAUCACUUCA|GCGAAAUU Wol.pipien 3550 |GAAUUCC-CCG(UGCAGAUG)CGGG-ua-ccggccu-uAGACGAAGAGA Wol.pipien 3600 CCCCGUGC|ACCU-UUACUAU|AGCUUUACAUU|GCUAUUAAAAGUGUGA Wol.pipien 3650 UGUGCAGGAUAGGUGGGAGACUUUGAAG--UUAUGGC(GCUC)AUGAUAA Wol.pipien 3700 UGGAGUUAAC-C-UUGAGAUACCACC|CUUU-ACACUUUUGAU-AUCUAA Wol.pipien 3750 -CUAUGU----UUCA(--UU-AUC)-UGGAACUAG-GACAUUGUAUGGUG Wol.pipien 3800 GG-UAGUUUGACUG(G--)CGGUC|GCCUCC(UAA-AAAGUAAC)GGAGG Wol.pipien 3850 C|G|U|GCGAAGGUAAGC|UAGAGCUGG(UCGGAAA)UCAGCUUGA-UA| Wol.pipien 3900 GU(A|CAAUG)GCAUAAGCUUGCCUGACUGCGAGGC(UGACAA)GCCAAG Wol.pipien 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUAAUUCUG(UAUGGA) Wol.pipien 4000 AGG|GUUAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC Wol.pipien 4050 UGA--UGGUGUUCGAGA(G-UUC-AUA)UCGACGACA-CCGU-UUGGCAC Wol.pipien 4100 CUCGAUGUC|GACU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU Wol.pipien 4150 CCCAAGGGU|UC--U(UGUUC)GC-CGAUUAAAGUGUUACG-UGAGUUGG Wol.pipien 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-UUCUAU-CU|GCCGUG Wol.pipien 4250 G-G|UG-AAGGAAAUUU|GA-|GAAGAUC-cgucgacccagaucugaCUC Wol.pipien 4300 (UAGUAC(GAGA)GGACC)GAGAUGU|AUAUACCUCUGGUGUACCAGC|U Wol.pipien 4350 GUUAU(GC-CA-)AUAGCA-UCGCUGGGUAGCU-AUGUAUAGAUGGGAUA Wol.pipien 4400 AUUGCU(GAAACGUA-UA)AGCAAGAAACCCUCUUC|AAAA--AAAUUUC Wol.pipien 4450 C|CA|------(------)--------au-uaag|-GC|CGUGG-(GAGA Wol.pipien 4500 CU-A)CCACG-UUGAUAG|GCUAG|GUGUA-GAAGCAUG--(GUAA-)-- Wol.pipien 4550 CAUGU|GA-AGCUA|A|CUGGUACUAAUn-nnnnnnnnn|nnnnnn-nnn Wol.pipien 4600 n-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Wol.pipien 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Wol.pipien 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Wol.pipien 4750 ~~~|||||| P.denitrif 0 -------------------------------------------------- P.denitrif 50 ----------------------------|-----gaucAAUCAAGCGCG- P.denitrif 100 A-UAAGGGCGUUUGGUGGAUG|CCUUGG|CAGCAAG|AG|GC-GAUGAAG P.denitrif 150 GA|CGUG(AUAC-UC-)U|-GCG-AUAAGCCAUGGG|-GAGCU(G-AG-A P.denitrif 200 AUA-)AGCUUUG-AUC-CAUGGAUC|UCCGAAUGGG(GAAA)CCC|ACCU P.denitrif 250 G---(aaacucgauuguuguuacc-------------------------- P.denitrif 300 ------------------------(cuug)gguaucaacaauuggguuaa P.denitrif 350 c------------------------------------------------- P.denitrif 400 -------------------------------------------------- P.denitrif 450 --------)---CAGGU-ACUUAUCACCU(GA-AUACA--UA)GGG-UUU P.denitrif 500 UA-A--GAG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG P.denitrif 550 GAGGAAAGGAAAUC(-AACA--)GAUAC|UCC-CCCAGUAGU(GGCGA)G P.denitrif 600 CGA-ACG-GGGA-CCA-GCCG------------------------(---- P.denitrif 650 -)------------------------------------------------ P.denitrif 700 ------------------------------------agccgugagaauga P.denitrif 750 ccaGAAu-ggc-c(u-ggaaa)g-gccagc|c(aua)gcGGG(UGACAGC P.denitrif 800 )CCCGU-Augg-gaaguuugaucggacgc--------------------- P.denitrif 850 ---------------auuAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC P.denitrif 900 UGAAGAU-CGG-GG(GACCAC)CC-UCG-AAGGCUAA----GUACUCCUU P.denitrif 950 GCUGACCGAUAGCG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G P.denitrif 1000 CACCCC(GACGA-)GGGGA--GUGAAA-CAGUUUCUGAAACCGG-ACGCC P.denitrif 1050 UACAA-G-CAGUCGGAGGGG--C---------------(---cuugc--) P.denitrif 1100 ---------------G-CCCUGACGGCGUACCU(UUU-GUAU|A)AUGG| P.denitrif 1150 -GUCAACGACUUGG-UCUA-UCUAGC-AAGCUUAAGCC-(-G-UUA)-GG P.denitrif 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGC-------- P.denitrif 1250 --------------------------augaG-UUAGAUGGAUCA-GACCC P.denitrif 1300 GAAAC-CAG-AUGA-UCUAGGCAUGAG|CAGGCUGAAGGUUGGG(UAAC) P.denitrif 1350 AC-CAACUGGAGGGCCGAACC-CACACCU(-GUUGAAAA)AGGUC|GGG- P.denitrif 1400 AUGAC-UUGUGCCUAGGGGU(-GAAAG)GCCAAUCAAAUCUGGAGAUAGC P.denitrif 1450 UGGUUCUCCGCGAAAGCUAU(-UUAG)GUAGCGC|-GUCAGACGA---A| P.denitrif 1500 -UUC|UCCCGG|GGGUAG|AGC-ACUGC-AUGGAUGA-UG|-GGGGC(cc P.denitrif 1550 aca)GCCUUACUGAGUCUAA-GCAAACUCCGAA-UA-|CCG-G-G-A--A P.denitrif 1600 GAAC----U|AUC-UGGCAGACACAC--GGC-GGGU(GCUAAC)GUCCGU P.denitrif 1650 -CGUG-GAGAGGG(-AAACAA-)CCCUGACCAACAGCUAAG-GC|CCCC- P.denitrif 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGCAUGUG-GGACUUCCAA- P.denitrif 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAU P.denitrif 1800 AGC(GUAACA)GC|UCACUGGUcuaguCAAGA-GGU-CU--UGC|GGCGA P.denitrif 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|UUGG|gugug P.denitrif 1900 ca-----(uuua-------------------------------------- P.denitrif 1950 -------------------------------------------------- P.denitrif 2000 -------------------------------------------------- P.denitrif 2050 -------------------------------------------------- P.denitrif 2100 -------------------------------------------------- P.denitrif 2150 -----------------------------------)------ugcacgc- P.denitrif 2200 GG-UAGCGGAG|-----CGUU-CCG-UGAuauaacgccauccgacu---- P.denitrif 2250 -----------------ucagcuuucc(cuugggaaagccuu-------- P.denitrif 2300 -----------------ggucggacaggcguuU-ACUG-UGAAGCCG-G- P.denitrif 2350 G-CC(-GUAA-)GGCauCCGGUGG|AGUGAU-CGGAAGCGAGAAUGU-UG P.denitrif 2400 AC|AUG-AGUA--GCGACAAACAGGG(UGAGAGA)CCCUGU|CGCC-GAA P.denitrif 2450 AGUCCAAGGGUUCCUG-CUUAAAG-(CUAAU)CU|G-AGCAGGGUAAGC| P.denitrif 2500 CGG|C-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAACC P.denitrif 2550 AGG-(UU-AAUAUU)C-CUGG|GC|ca-g-ga-gau-------------- P.denitrif 2600 -------------------------------------------------- P.denitrif 2650 -------------------------------------------------- P.denitrif 2700 -------------------gg--uga-cggau--cgcaggugua-g-|uu P.denitrif 2750 c-cuc(cuuaucggau-ug---)ga-gggg-|------------------ P.denitrif 2800 ----------------------------------(--------)--|--- P.denitrif 2850 --------------------------------------|----|------ P.denitrif 2900 -----------(-------)-----------------------cugc-ug P.denitrif 2950 agcg-----|guuccuggaaa-ua---------------------gc--c P.denitrif 3000 cuccac--aag|A|CCGUACCCUAAACC(GACACA)GG|UGG-ACUGGU- P.denitrif 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACCACAUUU----------- P.denitrif 3100 ----AAGGAACUCGGCAAAAUACCUCCGUAAG(-UUCG)CGAGAAGGAGG P.denitrif 3150 |CCCC------guu------------ggcag(-gcaa-)cuguc------ P.denitrif 3200 -------gg----cgGG-G|G(GCA)CAAACCAGGGG-GUGG|CGACU-- P.denitrif 3250 ---GU(UUACUAAAA)ACACAGGGCUCUG|CGAAGCC(GUAA------)G P.denitrif 3300 GCGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAAA P.denitrif 3350 GGAGAG----GU--------(G-CAA)-----------GC------CUUG P.denitrif 3400 AAUUGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( P.denitrif 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA P.denitrif 3500 AUGGCGUAACGA-CUUCCCCGCUGUCUCAAAUGUGGACUCA|GCGAAAUU P.denitrif 3550 |GAAUUGU-CUG(UGAAGAUG)CAGACUUCCCGCGGU-UAGACGGAAAGA P.denitrif 3600 CCCCAUGC|ACCU-UUACUAU|AGCUUCGCACU|GGCAUCAGGAUUGCGA P.denitrif 3650 UGUGCAGGAUAGGUGGUAGGCAUCGAAG--CGGGGAC(GCCA)GUUCCCG P.denitrif 3700 UGGAGCCAUC-C-UUGAGAUACCACC|CUUC-GCACUCUUGAU-GUCUAA P.denitrif 3750 -CCGCGG----CCCG(--UU-AUC)-CGGGUCCGG-GACCCUGCGUGGUG P.denitrif 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGAGUAAC)GGAGG P.denitrif 3850 C|G|C|GCGAAGGUUGGC|UCAGAGCGG(UCGGAAA)UCGCUCGUC-GA| P.denitrif 3900 GU(G|CAAUG)GCAGAAGCCAGCCUGACUGCAAGAC(UGACAA)GUCGAG P.denitrif 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(AGUGGA) P.denitrif 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|UGGG|GAUAACAG|GC P.denitrif 4050 UGA--UGAUGCCCAAGA(G-UCC-AUA)UCGACGGCA-UCGU-UUGGCAC P.denitrif 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GGAGC---A)-GGU P.denitrif 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG P.denitrif 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG P.denitrif 4250 G-G|UG-UAGGAUACUU|GA-|GAGGAGU-UGC--------------CCC P.denitrif 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGUUCCACUGGUGGACCAGU|U P.denitrif 4350 AUCGU(GC-CA-)ACGGUA-GUGCUGGGUAGCU-AUGAACGGACAGGAUA P.denitrif 4400 AACGCU(GAAGGCAUCUA)AGCGUGAAGCCCCCCUC|AAAACAAGGUAUC P.denitrif 4450 C|CU|------(------)---------U-GAGA|-GC|CGUGG-(AAGA P.denitrif 4500 CC-A)CCACG-UCGAUAG|GCCGG|AGAUG-UAAGCGCA--(GCAA-)-- P.denitrif 4550 UGCGU|UC-AGUUG|A|CCGGUACUAAUC-GCUCGAuaG|GCUUGA-UUU P.denitrif 4600 Gauccgg-|----------------------------------------- P.denitrif 4650 -------------------------------------------------- P.denitrif 4700 -------------------------------------------------- P.denitrif 4750 ---|||||| R.capsulat 0 -------------------------------------------------- R.capsulat 50 ----------------------------|---------AAUCAAGCGCG- R.capsulat 100 A-GAAGGGCGUUUGGUGGAUG|CCUUGG|CAGCAAG|AG|GC-GAUGAAG R.capsulat 150 GA|CGUG(AUAC-UC-)U|-GCG-AUAAGUCAUGGG|-GAGCU(G-AG-A R.capsulat 200 AUA-)AGCUUUG-AUC-CAUGAAUU|UCCGAAUGGG(GAAA)CCC|ACCU R.capsulat 250 G---(agaccuuauuguuguucu--------------------------- R.capsulat 300 -ucgcaacggaccuccgcgccggc(ucaau-------------------- R.capsulat 350 -------------------------------------------)gccgg- R.capsulat 400 ----------------agcgcugcgccgcacugcgagacagucaacagua R.capsulat 450 ggguuaaa)---CAGGU-ACUUUACUCCU(GA-AUACA--UA)GGG-GGU R.capsulat 500 -UUA--GAG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG R.capsulat 550 GAGGAAAGGAAAUC(-AAC---)GAUAC|UCC-GUUAGUAGU(GGCGA)G R.capsulat 600 CGA-ACG-CGGA-CCA-GCCG------------------------(---- R.capsulat 650 -)------------------------------------------------ R.capsulat 700 ------------------------------------agccgugagaacga R.capsulat 750 gugGAAu-ggu-c(u-ggaaa)g-gccagc|g(aua)u-GGG(UGACAGC R.capsulat 800 )CCCGU-Acac-gaaguuugaucggacgc--------------------- R.capsulat 850 ---------------auuAAGUAGGGCGGGA(CACGUG-UAA)UCCUGUC R.capsulat 900 UGAAGAU-CGG-GG(GACCAC)CC-UCG-AAGGCUAA----GUACUCCUU R.capsulat 950 GCUGACCGAUAGCG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.capsulat 1000 CACCCC(GACGA-)GGGGA--GUGAAA-CAGUUUCUGAAACCGG-ACGCC R.capsulat 1050 UACAA-G-CAGUCGGAGCUU--C---------------(---cuuga--) R.capsulat 1100 ---------------G-AAGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.capsulat 1150 -GUCAACGACUUGG-UCUU-ACGAGC-AAGCUUAAGCC-(-G-AUA)-GG R.capsulat 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGa-------- R.capsulat 1250 --------------------------c-gaG-UUCGUGGGAUCA-GACCC R.capsulat 1300 GAAAC-CAG-AUGA-UCUAGCCAUGUC|CAGGAUGAAGGUUGGG(UAAC) R.capsulat 1350 AC-CAACUGGAGGUCCGAACC-GACACCC(-GUUGAAAA)GGGUC|CGG- R.capsulat 1400 AUGAG-AUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAAUCUGGAGAUAGC R.capsulat 1450 UGGUUCUCCGCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGGACGA---A| R.capsulat 1500 -UAC|CUGCGG|GGGUAG|AGC-ACUAC-AUGGAUGA-UG|-GGGGC(cc R.capsulat 1550 aca)GCCUUACUGAGUCUAA-GUAAACUCCGAA-UA-|CCG-C-A-G--A R.capsulat 1600 GUAC----U|AUC-CGGGAGACACAC--GGC-GGGU(GCUAAC)GUCCGU R.capsulat 1650 -CGUG-AAGAGGG(-AAACAA-)CCCUGACCAACAGCUAAG-GC|CCCC- R.capsulat 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGCAUGUG-GGAUUUCCAA- R.capsulat 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAU R.capsulat 1800 AGC(GUAACA)GC|UCACUGGUcuaguCAAGA-GAU-CC--UGC|GGCGA R.capsulat 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|UUGG|augug R.capsulat 1900 ca-----(gaaa-------------------------------------- R.capsulat 1950 -------------------------------------------------- R.capsulat 2000 -------------------------------------------------- R.capsulat 2050 -------------------------------------------------- R.capsulat 2100 -------------------------------------------------- R.capsulat 2150 -----------------------------------)------ugcacgu- R.capsulat 2200 GG-UAGCGGAG|-----CGUU-CUG-UGAuauagcaccgcccgacu---- R.capsulat 2250 -----------------uuagcucucc(uucgggaaagccuu-------- R.capsulat 2300 -----------------ggucggacaggugcuG-ACUG-UGAAGCCG-G- R.capsulat 2350 C-CU(-GUGA-)GGGauCCGGUGG|AGUGAU-CAGAAGCGAGAAUGU-UG R.capsulat 2400 AC|AUG-AGUA--GCGAUAAAGAGGG(UGAGAGA)CCCUCU|CGCC-GAA R.capsulat 2450 AGUCCAAGGGUUCCUG-CUUAAAG-(CUAAU)CU|G-AGCAGGGUAAGC| R.capsulat 2500 CGG|C-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAACC R.capsulat 2550 ACG-(UU-AAUAUU)C-GUGG|GC|ca-g-ga-gga-u------------ R.capsulat 2600 -------------------------------------------------- R.capsulat 2650 -------------------------------------------------- R.capsulat 2700 --------------------g--uga-cggau--gcucacuguu-g-|uu R.capsulat 2750 c-gac(cuuaucggau-ug---)gu-cggg-|------------------ R.capsulat 2800 ----------------------------------(--------)--|--- R.capsulat 2850 --------------------------------------|----|------ R.capsulat 2900 -----------(-------)-----------------------cagc-ug R.capsulat 2950 cggu-----|gucccaggaaa-ua---------------------gc--c R.capsulat 3000 cuccau--aug|A|CCGUACCCUAAACC(GACACA)GG|UGG-ACAGGU- R.capsulat 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACCACGUUU----------- R.capsulat 3100 ----AAGGAACUCGGCAAAAUGCCUCCGUAAG(-UUCG)CGAGAAGGAGG R.capsulat 3150 |CCCC------auu------------cgcac(-gcaa-)gugug------ R.capsulat 3200 ------ggu----ggGG-G|G(GCA)CAAACUAGGGG-GUGG|CGACU-- R.capsulat 3250 ---GU(UUACUUAAA)ACACAGGGCUCUG|CGAAGCC(GUAA------)G R.capsulat 3300 GCGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAAA R.capsulat 3350 GGAGGG----GU--------(G-CAA)-----------GC------UCCG R.capsulat 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.capsulat 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.capsulat 3500 AUGGCGUAACGA-UCUCCCCGCUGUCUCAAACGUGGACUCA|GCGAAAUU R.capsulat 3550 |GAACUGU-GUG(UCAAGAUG)CACACUACCCGCGGU-UAGACGGAAAGA R.capsulat 3600 CCCCAUGA|ACCU-UUACUCC|AGCUUUGCACU|GGCAUCAGGAUUGUGA R.capsulat 3650 UGUGCAGGAUAGGUGGUAGCCUUUGAAA--CCGUGAC(GCCA)GUUGCGG R.capsulat 3700 UGGAGGCUCC-C-UUGAGAUACCACC|CUUC-GCACUCUUGAU-GUCUAA R.capsulat 3750 -CCGCGG----UCCG(--UC-AUC)-CGGAUCCGG-GACCCUGCAUGGUG R.capsulat 3800 GG-GAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AUCGUAAC)GGAGG R.capsulat 3850 C|G|C|GCGAAGGUAGGC|UCAGACCGG(UCGGAAA)UCGGUCGUU-GA| R.capsulat 3900 GU(G|CAAUG)GCAAAAGCCUGCCUGACUGCAAGAC(UGACAA)GUCGAG R.capsulat 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCA(AGUGGG) R.capsulat 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.capsulat 4050 UGA--UGAUGCCCAAGA(G-UCC-AUA)UCGACGGCA-UCGU-UUGGCAC R.capsulat 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GGAGC---A)-GGU R.capsulat 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.capsulat 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG R.capsulat 4250 G-G|UG-UAGGAUACUU|GA-|GAGGAGU-UGC--------------CCC R.capsulat 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGUUCCACUGGUGGACCAGU|U R.capsulat 4350 AUCGU(GC-CA-)ACGGUA-GUGCUGGGUAGCU-AUGAACGGACAGGAUA R.capsulat 4400 AACGCU(GAAGGCAUCUA)AGCGUGAAGCCCCCCUC|AAAACCAGGUAUC R.capsulat 4450 C|CU|------(------)---------U-GAGG|-GC|CGUGG-(AAGA R.capsulat 4500 CC-A)CCACG-UCGAUAG|GCCGG|AGAUG-UAAGUGCA--(GCAA-)-- R.capsulat 4550 UGCAU|UC-AGUUG|A|CCGGUACUAAUU-GCCCGAuuG|GCUUGA-UUU R.capsulat 4600 G-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.capsulat 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.capsulat 4700 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.capsulat 4750 ~~~|||||| R.sphaer.A 0 -------------------------------------------------- R.sphaer.A 50 ----------------------------|----------AUCAAGCGCG- R.sphaer.A 100 A-AAAGGGCGUUUGGUGGAUG|CCUAGG|CAGCAAG|AG|GC-GAUGAAG R.sphaer.A 150 GA|CGUG(AUAC-CC-)U|-GCG-UUAAGCCAUGGG|-GAGCC(G-GG-A R.sphaer.A 200 AUG-)GGCUUUG-AUC-CAUGGAUG|UCCGAAUGGG(GAAA)CCC|ACCU R.sphaer.A 250 G---(acauucugcuauugu------------------------------ R.sphaer.A 300 -------------------uaucc(aac---------------------- R.sphaer.A 350 -------------------------------------------)ggaua- R.sphaer.A 400 -----------------------------------------ucgauagug R.sphaer.A 450 gggugaga)---CAGGU-AUCUUAACCCU(GA-AUACA--UA)GGG-GUU R.sphaer.A 500 -UUG--AAG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG R.sphaer.A 550 GAGGAAAGGAAAUC(-AACA--)GAGAC|UCC-GCUAGUAGU(GGCGA)G R.sphaer.A 600 CGA-ACG-CGGA-CCA-GCCG------------------------(---- R.sphaer.A 650 -)------------------------------------------------ R.sphaer.A 700 -----------------------------------aucuccgaagaguga R.sphaer.A 750 cugGAAu-ggc-c(u-ggaaa)g-gccagc|c(aca)gcGGG(UGACAGC R.sphaer.A 800 )CCCGU-Acag-gaagcuc-caggagacau-------------------- R.sphaer.A 850 ---------------aucAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.sphaer.A 900 UGAAGAU-CGG-GG(GACCAC)CC-CCG-AAGGCUAA----GUACUCCUU R.sphaer.A 950 GCUGACCGAUAGCG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.sphaer.A 1000 CACCCC(GACGA-)GGGGA--GUGAAA-CAGUACCUGAAACCGG-ACGCC R.sphaer.A 1050 UACAA-G-CAGUCGGAGGGU--C---------------(---cauga--) R.sphaer.A 1100 ---------------G-ACCUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.sphaer.A 1150 -GUCAACGACUUGG-UCUC-ACGAGC-AAGCUUAAGCC-(-G-GUA)-GG R.sphaer.A 1200 U-GGAGGCGCAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGU-------- R.sphaer.A 1250 --------------------------C-GAG-UUCGUGGGAUCA-GACCC R.sphaer.A 1300 GAAAC-CAG-GUGA-UCUAGCCAUGAG|CAGGAUGAAGUCAGGG(UAAC) R.sphaer.A 1350 AC-CUGAUGGAGGUCCGAACC-AACACCC(-GUUGAAAA)GGGUC|UGG- R.sphaer.A 1400 AUGAC-UUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACCUGGAGAUAGC R.sphaer.A 1450 UGGUUCUCCGCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGGACGA---A| R.sphaer.A 1500 -UAC|CUCGGG|GGGUAG|AGC-ACUGC-AUGGAUGA-UG|-GGGGC(cc R.sphaer.A 1550 aca)GCCUUACUGAGUCUAA-GCAAACUCCGAA-UA-|CCC-G-A-G--A R.sphaer.A 1600 GUAC----U|AUC-CGGGAGACACAC--GGC-GGGU(GCUAAC)GUCCGU R.sphaer.A 1650 -CGUG-AAGAGGG(-AAACAA-)CCCUGACCUGCAGCUAAG-GC|CCCC- R.sphaer.A 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGCAUGUG-GGACGGCCAA- R.sphaer.A 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAU R.sphaer.A 1800 AGC(GUAACA)GC|UCACUGGUcuagaUAAGC-UGU-CC--UGC|GGCGA R.sphaer.A 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|CAGG|augca R.sphaer.A 1900 ca-----(gcaa-------------------------------------- R.sphaer.A 1950 -------------------------------------------------- R.sphaer.A 2000 -------------------------------------------------- R.sphaer.A 2050 -------------------------------------------------- R.sphaer.A 2100 -------------------------------------------------- R.sphaer.A 2150 -----------------------------------)------ugugcgu- R.sphaer.A 2200 GG-UAGCGGAG|-----CGUU-CCG-UGAuauagcucauuguguguuuau R.sphaer.A 2250 cgaacgcaccaccgguccgaacgagggc(acugcccucaaguagcgaagc R.sphaer.A 2300 gguagggcgcgcgguagcgcacacaaagagcUU-UCUG-UGAAGCCG-G- R.sphaer.A 2350 G-CC(-GUAA-)GGCauCCGGUGG|AGAGAU-CGGAAGCGAGAAUGU-UG R.sphaer.A 2400 AC|AUG-AGUA--GCGACAAACAGGG(UGAGAGA)CCCUGU|CGCC-GAA R.sphaer.A 2450 AGUCCAAGGGUUCCUG-CUUAAAG-(CUAAU)CU|G-AGCAGGGUAAGC| R.sphaer.A 2500 CGG|C-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAACC R.sphaer.A 2550 AGG-(UU-AAUAUU)C-CUGG|GC|ca-g-ga-gga-u------------ R.sphaer.A 2600 -------------------------------------------------- R.sphaer.A 2650 -------------------------------------------------- R.sphaer.A 2700 --------------------g--uga-cggau--cgcaggugua-g-|uu R.sphaer.A 2750 c-ggu(cuuaucggau-ug---)ac-cggg-|------------------ R.sphaer.A 2800 ----------------------------------(--------)--|--- R.sphaer.A 2850 --------------------------------------|----|------ R.sphaer.A 2900 -----------(-------)-----------------------cugc-ug R.sphaer.A 2950 agcg-----|gucccuggaaa-ua---------------------gc--c R.sphaer.A 3000 cuccau--cag|a|CCGUACCCCAAACC(GACACA)GG|UGG-ACUGGU- R.sphaer.A 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACCACAUCA----------- R.sphaer.A 3100 ----AAGGAACUCGGCAAAAUGCCUCCGUAAG(-UUCG)CGAGAAGGAGG R.sphaer.A 3150 |CCCC------guc------------uguag(-gcaa-)cuaug------ R.sphaer.A 3200 ------ggc-----gGG-G|G(GCA)CAAACCAGGGG-GUGG|CGACU-- R.sphaer.A 3250 ---GU(UUACUUAAA)ACACAGGGCUGUG|CGAAGCC(GCAA------)G R.sphaer.A 3300 GCGACGU-AUACAGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAAA R.sphaer.A 3350 GGAGGA----GU--------(G-CAA)-----------GC------UCCG R.sphaer.A 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.sphaer.A 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.sphaer.A 3500 AUGGCGUAACGA-UCUCCCCGCUGUCUCUGAUGUGGACUCA|GCGAAAUU R.sphaer.A 3550 |GAACUGU-GUG(UCAAGAUG)CACACUUCCCGCGGU-UAGACGGAAAGA R.sphaer.A 3600 CCCCAUGA|ACCU-UUACUAU|AGCUUCGCACU|GGCAUCAGGAUUGUGA R.sphaer.A 3650 UGUGCAGGAUAGGUGGUAGGCAUCGAAG--CGGGGAC(GCCA)GUUCCCG R.sphaer.A 3700 UGGAGCCAAC-C-UUGAGAUACCACC|CUUC-GCCAUCUUGAU-GUCUAA R.sphaer.A 3750 -CCGCGG----CCCG(--UU-AUC)-CGGGUCCGG-GACCCUGCGUGGUG R.sphaer.A 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-ACAGUAAC)GGAGG R.sphaer.A 3850 C|G|C|GCGAUGGUGGGC|UCAGACCGG(UCGGAAA)UCGGUCGUC-GA| R.sphaer.A 3900 GU(G|CAAUG)GCAGAAGCCCGCCUGACUGCAAGAC(UGACAA)GUCGAG R.sphaer.A 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(AGUGGA) R.sphaer.A 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.sphaer.A 4050 UGA--UGAUGCCCAAGA(G-UCC-AUA)UCGACGGCA-UCGU-UUGGCAC R.sphaer.A 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GGAGC---A)-GGU R.sphaer.A 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.sphaer.A 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG R.sphaer.A 4250 G-G|UG-UAGGAGACUU|GA-|GAAGAGU-UGC--------------CCC R.sphaer.A 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGAUCCACUGGUGGACCAGU|U R.sphaer.A 4350 GUCGU(GC-CA-)ACGGCA-GUGCUGGGUAGCU-AUGAUCGGACAGGAUA R.sphaer.A 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAGCCCCCUUC|AAAACAAGGUCUC R.sphaer.A 4450 C|CU|------(------)---------U-GAGG|-GC|CGUGG-(AAGA R.sphaer.A 4500 CC-A)CCACG-UCGAUAG|GCCAG|AGGUG-UAAGCGCA--(GCAA-)-- R.sphaer.A 4550 UGCGU|UC-AGCUG|A|CUGGUACUAAUU-GCCCGAUAG|GCUUGA-UCU R.sphaer.A 4600 G-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.A 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.A 4700 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.A 4750 ~~~|||||| R.sphaer.B 0 -------------------------------------------------- R.sphaer.B 50 ----------------------------|----------AUCAAGCGCG- R.sphaer.B 100 A-AAAGGGCGUUUGGUGGAUG|CCUAGG|CAGCAAG|AG|GC-GAUGAAG R.sphaer.B 150 GA|CGUG(AUAC-CC-)U|-GCG-UUAAGCCAUGGG|-GAGCC(G-GG-A R.sphaer.B 200 AUG-)GGCUUUG-AUC-CAUGGAUG|UCCGAAUGGG(GAAA)CCC|ACCU R.sphaer.B 250 G---(acauucugcuauugu------------------------------ R.sphaer.B 300 -------------------uaucc(aac---------------------- R.sphaer.B 350 -------------------------------------------)ggaua- R.sphaer.B 400 -----------------------------------------ucgauagug R.sphaer.B 450 gggugaga)---CAGGU-AUCUUAACCCU(GA-AUACA--UA)GGG-GUU R.sphaer.B 500 -UUG--AAG-C-GAAC|CC-GGG-AACU|GA(AACA)UCUAAGUA-CCCG R.sphaer.B 550 GAGGAAAGGAAAUC(-AACA--)GAGAC|UCC-GCUAGUAGU(GGCGA)G R.sphaer.B 600 CGA-ACG-CGGA-CCA-GCCG------------------------(---- R.sphaer.B 650 -)------------------------------------------------ R.sphaer.B 700 -----------------------------------aucuccgaagaguga R.sphaer.B 750 cugGAAu-ggc-c(u-ggaaa)g-gccagc|c(aca)gcGGG(UGACAGC R.sphaer.B 800 )CCCGU-Acag-gaagcuc-caggagacau-------------------- R.sphaer.B 850 ---------------aucAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.sphaer.B 900 UGAAGAU-CGG-GG(GACCAC)CC-CCG-AAGGCUAA----GUACUCCUU R.sphaer.B 950 GCUGACCGAUAGCG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.sphaer.B 1000 CACCCC(GACGA-)GGGGA--GUGAAA-CAGUACCUGAAACCGG-ACGCC R.sphaer.B 1050 UACAA-G-CAGUCGGAGGGU--C---------------(---cauga--) R.sphaer.B 1100 ---------------G-ACCUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.sphaer.B 1150 -GUCAACGACUUGG-UCUC-ACGAGC-AAGCUUAAGCC-(-G-GUA)-GG R.sphaer.B 1200 U-GGAGGCGCAGC(GAAA-)GCGAGUCU(UAA-AA)GG-CGU-------- R.sphaer.B 1250 --------------------------C-GAG-UUCGUGGGAUCA-GACCC R.sphaer.B 1300 GAAAC-CAG-GUGA-UCUAGCCAUGAG|CAGGAUGAAGUCAGGG(UAAC) R.sphaer.B 1350 AC-CUGAUGGAGGUCCGAACC-AACACCC(-GUUGAAAA)GGGUC|UGG- R.sphaer.B 1400 AUGAC-UUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACCUGGAGAUAGC R.sphaer.B 1450 UGGUUCUCCGCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGGACGA---A| R.sphaer.B 1500 -UAC|CUCGGG|GGGUAG|AGC-ACUGC-AUGGAUGA-UG|-GGGGC(cc R.sphaer.B 1550 aca)GCCUUACUGAGUCUAA-GCAAACUCCGAA-UA-|CCC-G-A-G--A R.sphaer.B 1600 GUAC----U|AUC-CGGGAGACACAC--GGC-GGGU(GCUAAC)GUCCGU R.sphaer.B 1650 -CGUG-AAGAGGG(-AAACAA-)CCCUGACCUGCAGCUAAG-GC|CCCC- R.sphaer.B 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGCAUGUG-GGACGGCCAA- R.sphaer.B 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAU R.sphaer.B 1800 AGC(GUAACA)GC|UCACUGGUcuagaUAAGC-UGU-CC--UGC|GGCGA R.sphaer.B 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|CAGG|augca R.sphaer.B 1900 ca-----(gcaa-------------------------------------- R.sphaer.B 1950 -------------------------------------------------- R.sphaer.B 2000 -------------------------------------------------- R.sphaer.B 2050 -------------------------------------------------- R.sphaer.B 2100 -------------------------------------------------- R.sphaer.B 2150 -----------------------------------)------ugugcgu- R.sphaer.B 2200 GG-UAGCGGAG|-----CGUU-CCG-UGAuauagcucauuguguguuuau R.sphaer.B 2250 cgaacgcaccaccgguccgaacgagggc(acugcccucaaguagcgaagc R.sphaer.B 2300 gguagggcgcgcgguagcgcacacaaagagcuU-UCUG-UGAAGCCG-G- R.sphaer.B 2350 G-CC(-GUAA-)GGCauCCGGUGG|AGAGAU-CGGAAGCGAGAAUGU-UG R.sphaer.B 2400 AC|AUG-AGUA--GCGACAAACAGGG(UGAGAGA)CCCUGU|CGCC-GAA R.sphaer.B 2450 AGUCCAAGGGUUCCUG-CUUAAAG-(CUAAU)CU|G-AGCAGGGUAAGC| R.sphaer.B 2500 CGG|C-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAACC R.sphaer.B 2550 AGG-(UU-AAUAUU)C-CUGG|GC|ca-g-ga-gga-u------------ R.sphaer.B 2600 -------------------------------------------------- R.sphaer.B 2650 -------------------------------------------------- R.sphaer.B 2700 --------------------g--uga-cggau--cgcaggugua-g-|uu R.sphaer.B 2750 c-ggu(cuuaucggau-ug---)ac-cggg-|------------------ R.sphaer.B 2800 ----------------------------------(--------)--|--- R.sphaer.B 2850 --------------------------------------|----|------ R.sphaer.B 2900 -----------(-------)-----------------------cugc-ug R.sphaer.B 2950 agcg-----|gucccuggaaa-ua---------------------gc--c R.sphaer.B 3000 cuccau--cag|a|CCGUACCCCAAACC(GACACA)GG|UGG-ACUGGU- R.sphaer.B 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACCACAUCA----------- R.sphaer.B 3100 ----AAGGAACUCGGCAAAAUGCCUCCGUAAG(-UUCG)CGAGAAGGAGG R.sphaer.B 3150 |CCCC------guc------------uguag(-gcaa-)cuaug------ R.sphaer.B 3200 ------ggc-----gGG-G|G(GCA)CAAACCAGGGG-GUGG|CGACU-- R.sphaer.B 3250 ---GU(UUACUUAAA)ACACAGGGCUGUG|CGAAGCC(GCAA------)G R.sphaer.B 3300 GCGACGU-AUACAGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAAA R.sphaer.B 3350 GGAGGA----GU--------(G-CAA)-----------GC------UCCG R.sphaer.B 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.sphaer.B 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.sphaer.B 3500 AUGGCGUAACGA-UCUCCCCGCUGUCUCUGAUGUGGACUCA|GCGAAAUU R.sphaer.B 3550 |GAACUGU-GUG(UCAAGAUG)CACACUUCCCGCGGU-UAGACGGAAAGA R.sphaer.B 3600 CCCCAUGA|ACCU-UUACUAU|AGCUUCGCACU|GGCAUCAGGAUUGUGA R.sphaer.B 3650 UGUGCAGGAUAGGUGGUAGGCAUCGAAG--CGGGGAC(GCCA)GUUCCCG R.sphaer.B 3700 UGGAGCCAAC-C-UUGAGAUACCACC|CUUC-GCCAUCUUGAU-GUCUAA R.sphaer.B 3750 -CCGCGG----CCCG(--UU-AUC)-CGGGUCCGG-GACCCUGCGUGGUG R.sphaer.B 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-ACAGUAAC)GGAGG R.sphaer.B 3850 C|G|C|GCGAUGGUGGGC|UCAGACCGG(UCGGAAA)UCGGUCGUC-GA| R.sphaer.B 3900 GU(G|CAAUG)GCAGAAGCCCGCCUGACUGCAAGAC(UGACAA)GUCGAG R.sphaer.B 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(AGUGGA) R.sphaer.B 4000 AGG|GCCAUCGCUCAAC|GG-UAAAAGGUACUC|UGGG|GAUAACAG|GC R.sphaer.B 4050 UGA--UGAUGCCCAAGA(G-UCC-AUA)UCGACGGCA-UCGU-UUGGCAC R.sphaer.B 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GGAGC---A)-GGU R.sphaer.B 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.sphaer.B 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG R.sphaer.B 4250 G-G|UG-UAGGAGACUU|GA-|GAAGAGU-UGC--------------CCC R.sphaer.B 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGAUCCACUGGUGGACCAGU|U R.sphaer.B 4350 GUCGU(GC-CA-)ACGGCA-GUGCUGGGUAGCU-AUGAUCGGACAGGAUA R.sphaer.B 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAGCCCCCUUC|AAAACAAGGUCUC R.sphaer.B 4450 C|CU|------(------)---------U-GAGG|-GC|CGUGG-(AAGA R.sphaer.B 4500 CC-A)CCACG-UCGAUAG|GCCAG|AGGUG-UAAGCGCA--(GCAA-)-- R.sphaer.B 4550 UGCGU|UC-AGCUG|A|CUGGUACUAAUU-GCCCGAUAG|GCUUGA-UCU R.sphaer.B 4600 G-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.B 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.B 4700 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.B 4750 ~~~|||||| R.sphaer.C 0 -------------------------------------------------- R.sphaer.C 50 ----------------------------|----------AUCAAGCGCG- R.sphaer.C 100 A-AAAGGGCGUUUGGUGGAUG|CCUAGG|CAGCAAG|AG|GC-GAUGAAG R.sphaer.C 150 GA|CGUG(AUAC-CC-)U|-GCG-UUAAGCCAUGGG|-GAGCC(G-GG-A R.sphaer.C 200 AUG-)GGCUUUG-AUC-CAUGGAUG|UCCGAAUGGG(GAAA)CCC|ACCU R.sphaer.C 250 G---(acauucugcuauugu------------------------------ R.sphaer.C 300 -------------------uaucc(aac---------------------- R.sphaer.C 350 -------------------------------------------)ggaua- R.sphaer.C 400 -----------------------------------------ucgauagug R.sphaer.C 450 gggugaga)---CAGGU-AUCUUAACCCU(GA-AUACA--UA)GGG-GUU R.sphaer.C 500 -UUG--AAG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG R.sphaer.C 550 GAGGAAAGGAAAUC(-AACA--)GAGAC|UCC-GCUAGUAGU(GGCGA)G R.sphaer.C 600 CGA-ACG-CGCA-CCA-GCCG------------------------(---- R.sphaer.C 650 -)------------------------------------------------ R.sphaer.C 700 -----------------------------------aucuccgaagaguga R.sphaer.C 750 cugGAAu-ggc-c(u-ggaaa)g-gccagc|c(aca)gcGGG(UGACAGC R.sphaer.C 800 )CCCGU-Acag-gaagcuc-caggagacau-------------------- R.sphaer.C 850 ---------------aucAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.sphaer.C 900 UGAAGAU-CGG-GG(GACCAC)CC-CCG-AAGGCUAA----GUACUCCUU R.sphaer.C 950 GCUGACCGAUAGCG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.sphaer.C 1000 CACCCC(GACGA-)GGGGA--GUGAAA-CAGUACCUGAAACCGG-ACGCC R.sphaer.C 1050 UACAA-G-CAGUCGGAGGGU--C---------------(---cauga--) R.sphaer.C 1100 ---------------G-ACCUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.sphaer.C 1150 -GUCAACGACUUGG-UCUC-ACGAGC-AAGCUUAAGCC-(-G-GUA)-GG R.sphaer.C 1200 U-GGAGGCGCAGC(GAAA-)GCGAGUCU(UAA-AA)GGGCGU-------- R.sphaer.C 1250 --------------------------C-GAG-UUCGUGGGAUCA-GACCC R.sphaer.C 1300 GAAAC-CAG-GUGA-UCUAGCCAUGAG|CAGGAUGAAGUCAGGG(UAAC) R.sphaer.C 1350 AC-CUGAUGGAGGUCCGAACC-AACACCC(-GUUGAAAA)GGGUC|UGG- R.sphaer.C 1400 AUGAC-UUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACCUGGAGAUAGC R.sphaer.C 1450 UGGUUCUCCGCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGGACGA---A| R.sphaer.C 1500 -UAC|CUCGGG|GGGUAG|AGC-ACUGC-AUGGAUGA-UG|-GGGGC(cc R.sphaer.C 1550 aca)GCCUUACUGAGUCUAA-GCAAACUCCGAA-UA-|CCC-G-A-G--A R.sphaer.C 1600 GUAC----U|AUC-CGGGAGACACAC--GGC-GGGU(GCUAAC)GUCCGU R.sphaer.C 1650 -CGUG-AAGAGGG(-AAACAA-)CCCUGACCUGCAGCUAAG-GC|CCCC- R.sphaer.C 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGCAUGUG-GGACGGCCAA- R.sphaer.C 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAU R.sphaer.C 1800 AGC(GUAACA)GC|UCACUGGUcuagaUAAGC-UGU-CC--UGC|GGCGA R.sphaer.C 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|CAGG|augca R.sphaer.C 1900 ca-----(gcaa-------------------------------------- R.sphaer.C 1950 -------------------------------------------------- R.sphaer.C 2000 -------------------------------------------------- R.sphaer.C 2050 -------------------------------------------------- R.sphaer.C 2100 -------------------------------------------------- R.sphaer.C 2150 -----------------------------------)------ugugcgu- R.sphaer.C 2200 GG-UAGCGGAG|-----CGUU-CCG-UGAuauagcucauuguguguuuau R.sphaer.C 2250 cgaacgcaccaccgguccgaacgagggc(acugcccucaaguagcgaagc R.sphaer.C 2300 gguagggcgcgcgguagcgcacacaaagagcuU-UCUG-UGAAGCCG-G- R.sphaer.C 2350 G-CC(-GUAA-)GGCauCCGGUGG|AGAGAU-CGGAAGCGAGAAUGU-UG R.sphaer.C 2400 AC|AUG-AGUA--GCGACAAACAGGG(UGAGAGA)CCCUGU|CGCC-GAA R.sphaer.C 2450 AGUCCAAGGGUUCCUG-CUUAAAG-(CUAAU)CU|G-AGCAGGGUAAGC| R.sphaer.C 2500 CGG|C-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAACC R.sphaer.C 2550 AGG-(UU-AAUAUU)C-CUGG|GC|ca-g-ga-gga-u------------ R.sphaer.C 2600 -------------------------------------------------- R.sphaer.C 2650 -------------------------------------------------- R.sphaer.C 2700 --------------------g--uga-cggau--cgcaggugua-g-|uu R.sphaer.C 2750 c-ggu(cuuaucggau-ug---)ac-cggg-|------------------ R.sphaer.C 2800 ----------------------------------(--------)--|--- R.sphaer.C 2850 --------------------------------------|----|------ R.sphaer.C 2900 -----------(-------)-----------------------cugc-ug R.sphaer.C 2950 agcg-----|gucccuggaaa-ua---------------------gc--c R.sphaer.C 3000 cuccau--cag|a|CCGUACCCCAAACC(GACACA)GG|UGG-ACUGGU- R.sphaer.C 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACCACAUCA----------- R.sphaer.C 3100 ----AAGGAACUCGGCAAAAUGCCUCCGUAAG(-UUCG)CGAGAAGGAGG R.sphaer.C 3150 |CCCC------guc------------uguag(-gcaa-)cuaug------ R.sphaer.C 3200 ------ggc-----gGG-G|G(GCA)CAAACCAGGGG-GUGG|CGACU-- R.sphaer.C 3250 ---GU(UUACUUAAA)ACACAGGGCUGUG|CGAAGCC(GCAA------)G R.sphaer.C 3300 GCGACGU-AUACAGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAAA R.sphaer.C 3350 GGAGGA----GU--------(G-CAA)-----------GC------UCCG R.sphaer.C 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.sphaer.C 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.sphaer.C 3500 AUGGCGUAACGA-UCUCCCCGCUGUCUCUGAUGUGGACUCA|GCGAAAUU R.sphaer.C 3550 |GAACUGU-GUG(UCAAGAUG)CACACUUCCCGCGGU-UAGACGGAAAGA R.sphaer.C 3600 CCCCAUGA|ACCU-UUACUAU|AGCUUCGCACU|GGCAUCAGGAUUGUGA R.sphaer.C 3650 UGUGCAGGAUAGGUGGUAGGCAUCGAAG--CGGGGAC(GCCA)GUUCCCG R.sphaer.C 3700 UGGAGCCAAC-C-UUGAGAUACCACC|CUUC-GCCAUCUUGAU-GUCUAA R.sphaer.C 3750 -CCGCGG----CCCG(--UU-AUC)-CGGGUCCGG-GACCCUGCGUGGUG R.sphaer.C 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-ACAGUAAC)GGAGG R.sphaer.C 3850 C|G|C|GCGAUGGUGGGC|UCAGACCGG(UCGGAAA)UCGGUCGUC-GA| R.sphaer.C 3900 GU(G|CAAUG)GCAGAAGCCCGCCUGACUGCAAGAC(UGACAA)GUCGAG R.sphaer.C 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(AGUGGA) R.sphaer.C 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.sphaer.C 4050 UGA--UGAUGCCCAAGA(G-UCC-AUA)UCGACGGCA-UCGU-UUGGCAC R.sphaer.C 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GGAGC---A)-GGU R.sphaer.C 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.sphaer.C 4200 GUUUA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG R.sphaer.C 4250 G-G|UG-UAGGAGACUU|GA-|GAAGAGU-UGC--------------CCC R.sphaer.C 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGAUCCACUGGUGGACCAGU|U R.sphaer.C 4350 GUCGU(GC-CA-)ACGGCA-GUGCUGGGUAGCU-AUGAUCGGACAGGAUA R.sphaer.C 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAGCCCCCUUC|AAAACAAGGUCUC R.sphaer.C 4450 C|CU|------(------)---------U-GAGG|-GC|CGUGG-(AAGA R.sphaer.C 4500 CC-A)CCACG-UCGAUAG|GCCAG|AGGUG-UAAGCGCA--(GCAA-)-- R.sphaer.C 4550 UGCGU|UC-AGCUG|A|CUGGUACUAAUU-GCCCGAUAG|GCUUGA-UCU R.sphaer.C 4600 G-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.C 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.C 4700 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.sphaer.C 4750 ~~~|||||| Z.mobilis 0 -------------------------------------------------- Z.mobilis 50 -----------------------auggu|ggaaguucucAAGCGUGagg- Z.mobilis 100 --UAAGAGCAUUUGGUGGAUG|CCUAGG|CAUACAC|AG|GC-GAUGAAG Z.mobilis 150 GA|CGUG(GCAC-GC-)U|-GCG-AUAAGCUACGGC|-GAGAU(G-UG-A Z.mobilis 200 GCA-)AUCUUUG-ACC-CGUAGAUU|UCCGAAUGGG(GAAA)CCC|AUCC Z.mobilis 250 U---(caccauuuaauuucgauauugu----------------------- Z.mobilis 300 ------------------------(ucu)gcaguaucggagu-------- Z.mobilis 350 -------------------------------------------------- Z.mobilis 400 -------------------------------------------------u Z.mobilis 450 agguggga)---AGGAU-AUUAccaaagU(GA-AUACA--UA)Gcu-uug Z.mobilis 500 gu-g--AAG-C-GAAC|CC-GGcGAACU|GA(AACA)UCUAAGUA-CCCG Z.mobilis 550 GAGGAAAAGACAUC(-AACC--)GAGAU|UCC-GUUAGUAGU(GGCGA)G Z.mobilis 600 CGA-ACG-CGGA-GUA-GGCC------------------------(---- Z.mobilis 650 -)------------------------------------------------ Z.mobilis 700 ------------------------------a-guaccuuugauugcguua Z.mobilis 750 gcaGAAg-ucu-u(u-ggaaa)g-agacac|c(aua)guGGG(UGACAGU Z.mobilis 800 )CCCGU-Auguuaaaacaauauugaaggu--------------------- Z.mobilis 850 ---------------cuuGAGUAGGGCGGGG(CACGUG-AAA)CCUUGUC Z.mobilis 900 UGAACAU-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----AUACUCGUG Z.mobilis 950 UAUGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGCA-AAGGUGAAAA-G Z.mobilis 1000 AACCCC(GAUUA-)GGGGA--GUGAAA-CAGUUCCUGAAACCGA-AUGCU Z.mobilis 1050 UACAA-G-CAGUAGGAGggu--c---------------(----uuuaa-) Z.mobilis 1100 ---------------g-gccuGACUGCGUACCU(CUU-GCAU|A)AUGG| Z.mobilis 1150 -GUCUGUGACUUAA-UGUA-UCAAGC-AAGCUUAAGCC-(-G-AUA)-GG Z.mobilis 1200 U-GUAGGCGCAGC(GAAua)GCGAGUCU(GAA-UA)GGGCGa-------- Z.mobilis 1250 --------------------------uuuaG-UUUGAUGCAUUA-GACCC Z.mobilis 1300 GAAAC-CCG-GCGA-UCUAGGCAUGGU|CAGGAUGAAGGUAAGG(UAAC) Z.mobilis 1350 AC-UUACUGGAGGUCCGAACC-GAUUAAC(-GUUGAAAA)GUUAU|CGG- Z.mobilis 1400 AUGAA-CUGUGUUUAGGGGU(-GAAAG)GCCAAUCAAGCCGGGAAAUAGC Z.mobilis 1450 UGGUUCUCCGCGAAAACUAU(-UGAG)GUAGUGC|-CUCAUGUGA---U| Z.mobilis 1500 -GAC|CGUUGG|GGGUAG|AGC-ACUGG-AUGGAUGC-GG|-GGGUU(uc Z.mobilis 1550 gc-)GACCUACCAAAUCUAA-CCAAACUCCGAA-UA-|CCA-A-C-G--A Z.mobilis 1600 GUUU----A|ACA-UGGGAGACAGAC--GGC-GGGU(GCUAAG)GUCCGU Z.mobilis 1650 -CGUC-GAGAGGG(-AAACAG-)CCCUGACCUACAGCUAAG-GU|CCCC- Z.mobilis 1700 AAGUC-AUGU-C-UAA-GUG------GGAAAGCUUGUG-AAGACCCCAA- Z.mobilis 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA Z.mobilis 1800 AGC(GUAACA)GC|UCACUGGUcuaaaUAAGG-GUC-UU--UGC|GGCGA Z.mobilis 1850 AGAU-GUAA-CGGGGCUCAAGACAU-G|C|ACCGAAGCU|UAGG|auugu Z.mobilis 1900 uac----(auua-------------------------------------- Z.mobilis 1950 -------------------------------------------------- Z.mobilis 2000 -------------------------------------------------- Z.mobilis 2050 -------------------------------------------------- Z.mobilis 2100 -------------------------------------------------- Z.mobilis 2150 -----------------------------------)-----guaacagu- Z.mobilis 2200 GG-UAGCGGAG|-----CGUU-CCG-UAa--------------------- Z.mobilis 2250 -------------------------------------------------- Z.mobilis 2300 --------------------------------G-CCUG-UGAAGCAG-U- Z.mobilis 2350 C-UG(-GUAA-)UGG--ACUGUGG|AGGUAU-CGGAAGUGCGAAUGC-AG Z.mobilis 2400 AC|AUG-AGUA--GCGAUAAAUAGGG(UGAGAUG)CCCUAU|CGCC-GAA Z.mobilis 2450 AGUCCAAGGGUUCCUG-CGCAAGG-(CUAAU)CC|G-CGCAGGGUGAGU| Z.mobilis 2500 CGG|C-CCCUAAGACGAGCCC(GAAG)-G-GG-U-AGUCGAUGG-GAAAC Z.mobilis 2550 AGG-(UU-AAUAUU)C-CUGU|AC|cu-g-ga-gag-au----------- Z.mobilis 2600 -------------------------------------------------- Z.mobilis 2650 -------------------------------------------------- Z.mobilis 2700 --------------------g--uga-cggau--cguguaaauu-g-|ua Z.mobilis 2750 u-guc(cuuaucggau-ug---)ga-caug-|------------------ Z.mobilis 2800 ----------------------------------(--------)--|--- Z.mobilis 2850 --------------------------------------|----|------ Z.mobilis 2900 -----------(-------)-----------------------cuca-ua Z.mobilis 2950 agcg-----|guuccaggaaa-ua---------------------gcc-u Z.mobilis 3000 cuccau-auag|A|CCGUACCCUAAACC(GACACA)GG|UGG-ACAGGU- Z.mobilis 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAAGGGUGUUG----------- Z.mobilis 3100 ----AAGGAACUCGGCAAAUUGCCUCCGUACC(-UUCG)GAAGAAGGAGG Z.mobilis 3150 |CCCU------uau------------uauag(-gcaa-)cuau------- Z.mobilis 3200 ------ucu----aagg-G|G(GCA)CAGGCCAGGGG-GUAG|CGACU-- Z.mobilis 3250 ---GU(UUAGCAAAA)ACACAGGGCUCUG|CAAAGUC(GGCUUCAA--)G Z.mobilis 3300 ACGACGU-AUAGGGCCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAGU Z.mobilis 3350 GGAGGA----GU--------(G-CAA)-----------GC------UCUG Z.mobilis 3400 AAAUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( Z.mobilis 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Z.mobilis 3500 AUGGCGUAACGA-CUUCCCCACUGUCUCCAACACCUGCUCA|GCGAAAUU Z.mobilis 3550 |GAAUUCU-CCG(UGAAGAUG)CGGAGUACCCGCGGU-UAGACGGAAAGA Z.mobilis 3600 CCCCGUGC|ACCU-UUACUGC|AGCUUCAGAGU|GGCAUUAGGAAAGAAC Z.mobilis 3650 UGUGUAGCAUAGGUGGGAGGCUUUGAAA--CUUGAGC(GCCA)GCUUGAG Z.mobilis 3700 UGGAGCCAUA-G-GUGAAAUACCACC|CUGU-UGUUUUCUGAU-GUCUAA Z.mobilis 3750 -CCUAGA----ACCA(-UGA-AAC)-UGGUUCAGG-GACCCUCUGUGGCG Z.mobilis 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG Z.mobilis 3850 C|G|C|GCGAUGGUUGGC|UCAGGCCGG(UUGGAAA)CCGGCUGCAaGA| Z.mobilis 3900 GU(G|CAAUG)GCAUAAGCCAGCCUGACUGUGAGAC(UGACAA)GUCGAA Z.mobilis 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCU(CGUGGA) Z.mobilis 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC Z.mobilis 4050 UGA--UAACCCCCAAGA(G-CUC-AUA)UCGACGGGG-UUGU-UUGGCAC Z.mobilis 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGC---A)-GGU Z.mobilis 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGUGGUACG-UGAGCUGG Z.mobilis 4200 GUUCA-GAAC|GUC(GCGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG Z.mobilis 4250 G-G|CG-U-CGAUAUUU|GA-|GAGGAGU-UGC--------------CCU Z.mobilis 4300 (UAGUAC(GAAA)GGACC)GGGGUGA|ACAUGCCUCUGGUGGACCUGU|C Z.mobilis 4350 GUGGC(GC-CA-)GCCGCG-CAGCAGGGUAGCU-AUGCAUGGACGGGAUA Z.mobilis 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCCUCCCUC|AAGAUAAGAUAUC Z.mobilis 4450 -|uc|------(------)------------AGA|-GC|CGUCG-(AAGA Z.mobilis 4500 CU-A)CGACG-UUGAUAG|GCCAG|AUGUG-GAAGUGUG--(GUAA-)-- Z.mobilis 4550 CACAU|GU-AGCUA|A|CUGGUCCUAAUU-GCUCUAuu-|CACGCU-UUU Z.mobilis 4600 G-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Z.mobilis 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Z.mobilis 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Z.mobilis 4750 ~~~|||||| B.diminuta 0 -------------------------------------------------- B.diminuta 50 ----------------------------|---------GAUCAAGCGU-- B.diminuta 100 U-GAAGGGCUUCUGACGGAUG|CCUUGG|CGUAGAG|AG|GC-GAUGAAA B.diminuta 150 GA|CGUG(GCAA-GC-)U|-GCG-AUAAGAACCGGG|-GAGGC(G-CU-A B.diminuta 200 GCA-)CCCUUUG-AUC-CGGUUAUC|UCUGAAUGGG(GAAA)CCC|ACCU B.diminuta 250 U---(ugcggucuuccaa-------------------------------- B.diminuta 300 -----------------cucugcu(uuuc--------------------- B.diminuta 350 -------------------------------------------)ggagca B.diminuta 400 gcg------------------------------------auuggaugauc B.diminuta 450 gc--uua-)---AAGGU-ACAAUGA-CCU(GA-AUACA--UA)GGG-uuc B.diminuta 500 au-u--GAG-C-GAAC|CC-GGGGAACU|GA(AACA)UCUCAGUA-CCCG B.diminuta 550 GAGGAAAGGACAUC(-AACC--)GAGAC|UCC-CGUAGUAGU(GGCGA)G B.diminuta 600 CGA-ACC-GGGA-CCA-GGCC------------------------(---- B.diminuta 650 -)------------------------------------------------ B.diminuta 700 ------------------------------agugcucuugugaaauaa-a B.diminuta 750 gucGAAc-gga-a(u-ggaaa)g-uccggc|c(aua)gcGGG(UGACAGC B.diminuta 800 )CCCGU-Agac-gucaaaca-gcaagaga--------------------- B.diminuta 850 ---------------cucGAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC B.diminuta 900 UGAACAU-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----GUACUCCUC B.diminuta 950 UACGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.diminuta 1000 CACCCC(GACAA-)GGGGA--GUGAAA-CAGAUCCUGAAAUCGG-AAGCC B.diminuta 1050 UACAA-G-CAGUCGGAGccg-c----------------(---caagc--) B.diminuta 1100 ---------------g-cggUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.diminuta 1150 -GUCAGCGACUUCA-UGUG-UCGAGC-AAGCUUAAGCC-(-G-UUA)-GG B.diminuta 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCG--------- B.diminuta 1250 -------------------------cu-aaG-UUCGACGUAUGA-GACCC B.diminuta 1300 GAAAC-CAG-GUGA-UCUAUCCAUGAG|CAGGAUGAAGGUAAGG(UAAC) B.diminuta 1350 AC-UUACUGGAGGUCCGAACC-CGUGAAU(-GUUGAAAA)AUUCU|GGG- B.diminuta 1400 AUGAC-UUGUGGAUAGGGGU(-GAAAG)GCCAAUCAAACCUGGACAUAGC B.diminuta 1450 UGGUUCUCCGCGAAAUCUAU(-UUAG)GUAGAGC|-GUCCGAcga---A| B.diminuta 1500 -UAC|CCUGGG|GGGUAG|AGC-ACUGG-AUGGUUGC-GG|-GCUGC(gc B.diminuta 1550 ga-)GCGGUACCAAUACUAA-CCAAACUCCGAA-UA-|CCC-A-G-G--A B.diminuta 1600 GUAC----U|AUC-GGGCAGACACAC--GGC-GGGU(GCUAAC)GUCCGU B.diminuta 1650 -CGUG-AAAAGGG(-AAACAA-)CCCUAACCAUCAUCUAAG-GC|CCCC- B.diminuta 1700 AAGUC-AUGG-C-UAA-GUG------GGAAACGAUGUG-GGAUugcuuu- B.diminuta 1750 gacaAUCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA B.diminuta 1800 AGC(GUAACA)GC|UCACUGAUc-----AAGC-GAU-CC--UGC|GCGGA B.diminuta 1850 AAAU-GUAA-CGGGGCUAAAGCCAU-G|C|GCCGAAGAU|AUGG|guuug B.diminuta 1900 cag----(uuua-------------------------------------- B.diminuta 1950 -------------------------------------------------- B.diminuta 2000 -------------------------------------------------- B.diminuta 2050 -------------------------------------------------- B.diminuta 2100 -------------------------------------------------- B.diminuta 2150 -----------------------------------)-----cugcaagc- B.diminuta 2200 GG-UAGCGGAG|-----CGUU-CCG-UAA--------------------- B.diminuta 2250 -------------------------------------------------- B.diminuta 2300 --------------------------------G-CCUG-UGAAGGUC-A- B.diminuta 2350 A-CU(-GUGA-)GGU--UGGCUGG|AGGUAU-CGGAAGUGAGAAUGC-UG B.diminuta 2400 AC|AUG-AGUA--ACGAUAAACAGUG(UGAGAAA)CACUGU|CGCC-GAA B.diminuta 2450 AGACCAAGGGUUCCUG-CGUAAAG-(CUAAU)CU|G-CGCAGGGUUAGU| B.diminuta 2500 CGG|c-CCCUAAGGCGAGGCU(GAAA)-A-GCGU-AGUCGAUGG-GAAGC B.diminuta 2550 AGG-(UA-AAUAUU)C-CUGC|AC|ca-g-cu-gga-------------- B.diminuta 2600 -------------------------------------------------- B.diminuta 2650 -------------------------------------------------- B.diminuta 2700 -------------------ag--uga-cggau--ggcauaaguc-g-|uc B.diminuta 2750 g-ggg(cuuauuggau-ug--u)uc-ccgg-|------------------ B.diminuta 2800 ----------------------------------(--------)--|--- B.diminuta 2850 --------------------------------------|----|------ B.diminuta 2900 -----------(-------)-----------------------cggu-gg B.diminuta 2950 cguu-----|gucccuggaaa-ua---------------------acu-c B.diminuta 3000 cagc--ag-ag|a|CCGUACCCGAAACC(GACACA)GG|UGG-UCAGGU- B.diminuta 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACUGUGCUG----------- B.diminuta 3100 ----AAGGAACUCGGCAAAUUGCACGCGUAAC(-UUCG)GAAUAAGCGUG B.diminuta 3150 |ACuca-----ccc--------------ugg(-gcaa-)cca-------- B.diminuta 3200 ------gga---cugag-U|G(GCA)CAAGCCAGGGG-GUAG|CGACU-- B.diminuta 3250 ---GU(UUAGCAAAA)ACAUAGGGCUCUG|CGAAGCA(UCAA------)U B.diminuta 3300 GCGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCU-GAA-GGUUAAAG B.diminuta 3350 GGAGGA----GU--------(G-AAA------------GC------UCCG B.diminuta 3400 AACUGAAGCC|CAGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.diminuta 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.diminuta 3500 AUGGCGUAACGA-CUUCCCCACUGUCUCCAGCACAGGCUCA|GUGAAAUU B.diminuta 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUUCCCGCGGU-CAGACGGAAAGA B.diminuta 3600 CCCUAUGA|ACCU-UUACUAU|AGCUUCGCCUU|GGCGUUAGCGACCGUA B.diminuta 3650 UGUGUAGGAUAGGUGGGAGGCUAUGAAG--CCGGGGC(GCCA)GCUCUGG B.diminuta 3700 UGGAGCCAUC-C-UUGAAAUACCACC|CUUA-CUGUcGUUGAC-GUCUAA B.diminuta 3750 -CCGAGG----GCCG(--UU-AUC)-CGGUCCCGG-GACAUGGCGUGGUG B.diminuta 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGUGUAAC)GGAGG B.diminuta 3850 C|G|C|GCGAUGGUUAGC|UCAGACCGG(UCGGAAA)UCGGUCGUC-GA| B.diminuta 3900 GU(G|CAAUG)GCAUAAGCUAGCCUGACUGCGAGAC(UGACAA)GUCGAG B.diminuta 3950 CAGAGAC(GAAA)GU-CGGC|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) B.diminuta 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UAGG|GAUAACAG|GC B.diminuta 4050 UGA--UUUUGCCCAAGA(G-UCC-AUA)UCGACGGCA-AAGU-UUGGCAC B.diminuta 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGC---A)-GGU B.diminuta 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGUGGUACG-UGAGCUGG B.diminuta 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG B.diminuta 4250 G-G|UG-UUCGAAGCUU|GA-|GAGGAUC-UGU--------------CCC B.diminuta 4300 (UAGUAC(GAGA)GGACC)GGGAUGG|ACAUACCUCUGGUGGACCUGU|C B.diminuta 4350 AUGGC(GC-CA-)GCCGUG-CAGCAGGGUAGCU-AAGUAUGGAAUAGAUA B.diminuta 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACUAACCUC|AAAACAAGGCUUC B.diminuta 4450 G|C-|------(------)---------U-GAGG|-AU|CGUGG-(AAGA B.diminuta 4500 CU-A)CCACG-UUGAUAG|GCCAG|GUGUG-GAAGCGCG--(GUGA-)-- B.diminuta 4550 CGUGU|GA-AGCUU|A|CUGGUACUAAUA-AUCCGAUCG|GCUUGA-UCG B.diminuta 4600 U-------|----------------------------------------- B.diminuta 4650 -------------------------------------------------- B.diminuta 4700 -------------------------------------------------- B.diminuta 4750 ---|||||| R.palustri 0 -------------------------------------------------- R.palustri 50 ----------------------------|---------AAUCAAGUGCC- R.palustri 100 U-UAAGGGUGUUCGACGGAUG|CCUUGG|CGCUGAG|AG|GC-GAUGAAG R.palustri 150 GA|CGUG(CUAC-GC-)U|-GCG-AUAAGCCAUGGG|-GAGCU(G-CG-A R.palustri 200 AGA-)AGCUUUG-AUC-CGUGGAUU|UCCGAAUGGG(GAAA)CCC|ACCU R.palustri 250 U---(cgauagccggaacuccaagg------------------------- R.palustri 300 ------------ccuu-gcguuuc(gaga--------------------- R.palustri 350 -------------------------------------------)gagac- R.palustri 400 ----------------gugaggg-----------uuuggauuuccgguua R.palustri 450 ucaagag-)---AAGGU-AUGAGAUCUCU(GA-AUACA--UA)GGA-GGU R.palustri 500 -UUC--AAG-C-GAAC|CC-AGGGAACU|GA(AACA)UCUAAGUA-CCUG R.palustri 550 GAGGAAAGGACAUC(-AACC--)GAGAC|UCC-GCUAGUAGU(GGCGA)G R.palustri 600 CGA-ACG-CGUA-CCA-GGCC------------------------(---- R.palustri 650 -)------------------------------------------------ R.palustri 700 ------------------------------agucaucauuggaagac-aa R.palustri 750 uugGAAu-cuguc(a-ggaaa)g-cagagc|c(uua)gaGGG(UGAUAGC R.palustri 800 )CCCGU-Acaa-guaauucaaccauugaug-------------------- R.palustri 850 ---------------cUCGAGUAAGGCGGGA(CACGUG-AAA)UCCUGUC R.palustri 900 UGAACAU-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----GUACUCCUC R.palustri 950 AGCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G R.palustri 1000 CACCCC(GACGA-)GGGGA--GUGAAA-UAGUUCCUGAAAUCGG-ACACC R.palustri 1050 UACAA-A-CAGACGGAGCCC-aag-a------------(---uacgu--) R.palustri 1100 -------------ucu-GGGUGACGUCGUACCU(UUU-GUAU|U)AUGG| R.palustri 1150 -GCCAGCGACUUAA-UUUA-ACGAGC-AAGCUUAAGCC-(-G-GUA)-GG R.palustri 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- R.palustri 1250 --------------------------C-AAG-UUCGUUGGAUUA-GACCC R.palustri 1300 GAAAC-CUA-GUGA-UCUAGCCAUGAG|CAGGUUGAAGGUGAGG(UAAC) R.palustri 1350 AC-UCACUGGAGGACCGAACG-GGUGCCU(-GUUGAAAA)AGGCU|CCG- R.palustri 1400 AUGAC-UUGUGGUUAGGGGU(-GAAAG)GCCAAUCAAACUGGGAAAUAGC R.palustri 1450 UGGUUCUCCGCGAAAGAUAU(-UUAG)GUAUCGC|-CUCGGACGA---A| R.palustri 1500 -UAC|CUCAGG|GGGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGGAC(uu R.palustri 1550 acc)GUCUUACCAAACCCAA-CCAAACUCCGAA-UA-|CCU-G-A-G--A R.palustri 1600 GUAC----U|AUC-CGGGAGUCACAC--GGC-GGGU(GCUAAC)GUCCGU R.palustri 1650 -CGUG-GAGAGGG(-AAACAA-)CCCUGACCUACAGCUAAG-GC|CCCC- R.palustri 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGGAUGUG-GAAAUCCCAA- R.palustri 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA R.palustri 1800 AGC(GUAACA)GC|UCACUGGUcuaaaUAAGG-GUU-UC--UGC|GCCGA R.palustri 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|UAGG|gugug R.palustri 1900 c------(gcaa-------------------------------------- R.palustri 1950 -------------------------------------------------- R.palustri 2000 -------------------------------------------------- R.palustri 2050 -------------------------------------------------- R.palustri 2100 -------------------------------------------------- R.palustri 2150 -----------------------------------)-------gcacgc- R.palustri 2200 GG-UAGCGGAG|-----CGUU-CUG-UAAg-------------------- R.palustri 2250 -------------------------------------------------- R.palustri 2300 --------------------------------C-CUGC-GAAGGGCG-A- R.palustri 2350 C-CC(-GUGA-)GGG--CGCCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG R.palustri 2400 GC|AUG-AGUA--ACGACAAACACUG(UGAAAGA)CAGUGU|CGCC-GAA R.palustri 2450 AGUCCAAGGGUUCCUG-CGUAAAG-(UUAAU)CU|U-CGCAGGGUUAGC| R.palustri 2500 CGG|U-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAAUC R.palustri 2550 ACG-(UG-AAUAUU)C-GUGA|GC|ca-g-ug-gau-------------- R.palustri 2600 -------------------------------------------------- R.palustri 2650 -------------------------------------------------- R.palustri 2700 -------------------gg--uga-cgaau--cccuuauguu-g-|uu R.palustri 2750 c-gac(cuuacuggau-ug---)gu-cggg-|------------------ R.palustri 2800 ----------------------------------(--------)--|--- R.palustri 2850 --------------------------------------|----|------ R.palustri 2900 -----------(-------)-----------------------ccuc-ga R.palustri 2950 cggg-----|guuccaggaaa-ua---------------------gcc-u R.palustri 3000 ccacau--cag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACUGGU- R.palustri 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACUAUGUUG----------- R.palustri 3100 ----AAGGAACUCGGCAAUUUACCUCCGUAAC(-UUCG)GGAUAAGGAGG R.palustri 3150 |ccuucu----guu--------------ugc(-gcaa-)gcagg------ R.palustri 3200 -------ca----ggag-G|G(GCA)CAGACCAGGGG-GUGG|CAACU-- R.palustri 3250 ---GU(UUAACAAAA)ACACAGGGCUCUG|CGAAAUC(GCAA------)G R.palustri 3300 AUGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGA R.palustri 3350 GGAGGA----GU--------(G-CAA)-----------GC------UCUG R.palustri 3400 AAUUGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.palustri 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.palustri 3500 AUGGCGUAAUGA-CUUCCCCGCUGUCUCCAACAUAGACUCA|GUGAAAUU R.palustri 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUUCCUGCGGU-CAGACGGAAAGA R.palustri 3600 CCCCGUGC|ACCU-UUACUGU|AGCUUUGCGCU|GGUAUUCGUGACUGUU R.palustri 3650 UGUGUAGAAUAGGUGGUAGGCUUUGAAG--CUCGGGC(GCCA)GCUCGGG R.palustri 3700 UGGAGCCGCAAU-GUGAAAUACCACC|CUAA-UGGUUAUGGAU-AUCUAA R.palustri 3750 -CCGCGA----UCCC(--UU-AUC)-GGGUUCCGG-GACAGCGCAUGGUG R.palustri 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGAGUAAC)GGAGG R.palustri 3850 C|G|U|GCGACGGUAGGC|UCAGAACGG(UCGGAAA)UCGUUCGUC-GA| R.palustri 3900 GU(A|CAAUG)GCAUAAGCCUGCCUGACUGCGAGAC(CAACAA)GUCGAG R.palustri 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) R.palustri 4000 UGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC R.palustri 4050 UGA--UGACGCCCAAGA(G-UCC-AUA)UCGACGGCG-UCGU-UUGGCAC R.palustri 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU R.palustri 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG R.palustri 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG R.palustri 4250 G-G|UG-UUGGAAUGUU|GA-|GAGGAUU-UGC--------------CCC R.palustri 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGUACCUCUGGUGGAGCUGU|U R.palustri 4350 GUCGC(GC-CA-)GCGGCA-GUGCAGCAUAGCU-AUGUACGGACGGGAUA R.palustri 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACCCACCUC|AAAACGAGCAUUC R.palustri 4450 C|CU|------(------)---------U-GAGA|-AC|CGUGG-(AAGA R.palustri 4500 CC-A)CCACG-UUGAUAG|GCCGG|AUGUG-GAAGUGCG--(ACAA-)-- R.palustri 4550 UACAU|GUCAG-UU|A|CCGGUACUAAUC-GUUCGAUUG|GCUUGA-UUG R.palustri 4600 C-------|ucucauuau~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.palustri 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.palustri 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ R.palustri 4750 ~~~|||||| B.lupini 0 -------------------------------------------------- B.lupini 50 ----------------------------|---------AAUCAAGUGCC- B.lupini 100 U-UAAGGGUGUUCGGUGGAUG|CCUUGG|CGCUGAG|AG|GC-GAUGAAG B.lupini 150 GA|CGUG(CUAC-GC-)U|-GCG-AUAAGCCGUGGG|-GAGCU(G-CG-A B.lupini 200 AGA-)AGCUUUG-AUC-CAUGGAUU|UCCGAAUGGG(GAAA)CCC|ACCU B.lupini 250 U---(cgauagccggaacuccaagaccuuugucgaaagacaucggugugg B.lupini 300 gguu-----------cga---uca(gauga-------------------- B.lupini 350 -------------------------------------------)ugugag B.lupini 400 aagcc-aggccuuuagauuucgaucga-agagguuuuggauuuccgguua B.lupini 450 ucaagag-)---AAGGU-AUGAGACUUCU(GA-AUACA--UA)GGA-GGU B.lupini 500 -UUC--AAG-C-AAAC|CC-AGGGAACU|GA(AACA)UCUAAGUA-CCUG B.lupini 550 GAGGAAAGGACAUC(-AACA--)GAGAC|UCC-GUUAGUAGU(GGCGA)G B.lupini 600 CGA-ACG-CGGA-CCA-GGCC------------------------(---- B.lupini 650 -)------------------------------------------------ B.lupini 700 ------------------------------agugauacaucaaagac-aa B.lupini 750 ucgGAAc-cgguc(a-ggaaa)g-ccgggc|c(uca)gaGGG(UGAUAGC B.lupini 800 )CCCGU-Acga-guaaugcgaugauguauc-------------------- B.lupini 850 ---------------cACGAGUAAGGCGGGA(CACGUG-AAA)UCCUGUC B.lupini 900 UGAACGC-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----GUACUCCUC B.lupini 950 AGCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.lupini 1000 CACCCC(GACGA-)GGGGA--GUGAAA-UAG-ACCUGAAACCGG-ACACC B.lupini 1050 UACAA-A-CAGAUGGAGCCC-aag-a------------(---uacgu--) B.lupini 1100 -------------ucu-GGGUGACAUCGUACCU(UUU-GUAU|U)AUGG| B.lupini 1150 -GCCAGCGACUUAA-UUUA-ACGAGC-AAGCUUAAGCC-(-G-AUA)-GG B.lupini 1200 C-GAAGGCGCAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- B.lupini 1250 --------------------------C-AAG-UUCGUUGUAUUA-GACCC B.lupini 1300 GAAAC-CUA-GUGA-UCUAGCCAUGAG|CAGGUUGAAGGUGAGG(UAAC) B.lupini 1350 AC-UCACUGGAGGACCGAACG-GGUGCCU(-GUUGAAAA)AGGCU|CCG- B.lupini 1400 AUGAC-UUGUGGUUAGGGGU(-GAAAG)GCCAAUCAAACUGGGAAAUAGC B.lupini 1450 UGGUUCUCCGCGAAAGAUAU(-UUAG)GUAGCGC|-CUCGGAUGA---A| B.lupini 1500 -UAC|CUCAGG|GGGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGGAC(uu B.lupini 1550 acc)GUCUUACCAAACCCAA-CCAAACUCCGAA-UA-|CCU-G-A-G--A B.lupini 1600 GUAC----U|AUC-CGGGAGUCACAC--GGC-GGGU(GCUAAC)GUCCGU B.lupini 1650 -CGUG-GAGAGGG(-AAACAA-)CCCGGACCUACAGCUAAG-GC|CCCU- B.lupini 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGGAUGUG-GAAAUCCCAA- B.lupini 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA B.lupini 1800 AGC(GUAACA)GC|UCACUGGUcuaaaUAAGG-GUU-UC--UGC|GCCGA B.lupini 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|UAGG|gugug B.lupini 1900 aucc---(gcaa-------------------------------------- B.lupini 1950 -------------------------------------------------- B.lupini 2000 -------------------------------------------------- B.lupini 2050 -------------------------------------------------- B.lupini 2100 -------------------------------------------------- B.lupini 2150 -----------------------------------)----gggucacgc- B.lupini 2200 GG-UAGCGGAG|-----CGUU-CUG-UAAG-------------------- B.lupini 2250 -------------------------------------------------- B.lupini 2300 --------------------------------C-CUGC-GAA-GGGC-GA B.lupini 2350 C-UC(-GUGA-)GAG--CGCCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG B.lupini 2400 GC|AUG-AGUA--ACGACAAACACUG(UGAAAGA)CAGUGU|CGCC-GAA B.lupini 2450 AGUCCAAGGGUUCCUG-CGUAAAG-(UUAAU)CU|U-CGCAGGGUUAGC| B.lupini 2500 CGG|U-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAAUG B.lupini 2550 CAG-(UG-AAUAUU)C-UGCA|GC|ca-g-ug-gau-------------- B.lupini 2600 -------------------------------------------------- B.lupini 2650 -------------------------------------------------- B.lupini 2700 -------------------gg--uga-cgaau--cccguguguu-g-|uc B.lupini 2750 c-gac(cuuacuggau-ug---)gu-uggg-|------------------ B.lupini 2800 ----------------------------------(--------)--|--- B.lupini 2850 --------------------------------------|----|------ B.lupini 2900 -----------(-------)-----------------------cuuc-ga B.lupini 2950 aggg-----|guuccaggaaa-ua---------------------gcc-u B.lupini 3000 ccacau--cag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACUGGU- B.lupini 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACUAUGUUG----------- B.lupini 3100 ----AAGGAACUCGGCAAUUUACCUCCGUAAC(-UUCG)GGAUAAGGAGG B.lupini 3150 |cccauu----gcu--------------cgc(-gcaa-)gcg-------- B.lupini 3200 ------ggc---agugg-G|G(GCA)CAGACCAGGGG-GUGG|CAACU-- B.lupini 3250 ---GU(UUAACAAAA)ACACAGGGCUCUG|CGAAAUC(GCAA------)G B.lupini 3300 AUGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGA B.lupini 3350 GGAGAG----GU--------(G-CAA)-----------GC------CUUG B.lupini 3400 AAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.lupini 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.lupini 3500 AUGGCGUAAUGA-CUUCCCCGCUGUCUCCAACAUAGACUCA|GUGAAAUU B.lupini 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUUCCUGCGGU-CAGACGGAAAGA B.lupini 3600 CCCCGUGC|ACCU-UUACUGU|AGCUUUGCGCU|GGUAUUCGUGACUGUU B.lupini 3650 UGUGUAGAAUAGGUGGUAGGCUUUGAAG--CCGUGGC(GCCA)GCCAUGG B.lupini 3700 UGGAGCCGAAAU-GUGAAAUACCACC|CUAA-UGGUUAUGGAU-AUCUAA B.lupini 3750 -CCGCGU----CCCC(--UC-AGC)-GGGGACCGG-GACAGCGCAUGGUG B.lupini 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGAGUAAC)GGAGG B.lupini 3850 C|G|U|GCGAAGGUAGGC|UCAGAACGG(UCGGAAA)UCGUUCGUC-GA| B.lupini 3900 GU(A|UAAUG)GCAUAAGCCUGCCUGACUGCGAGAU(CUACGA)AUCGAG B.lupini 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) B.lupini 4000 UGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC B.lupini 4050 UGA--UGACGCCCAAGA(G-UCC-AUA)UCGACGGCG-UCGU-UUGGCAC B.lupini 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU B.lupini 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG B.lupini 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG B.lupini 4250 G-G|UG-UUGGAAUGUU|GA-|GAGGAUU-UGC--------------CCC B.lupini 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGUACCUCUGGUGGAGCUGU|U B.lupini 4350 GUCGC(GC-CA-)GCGGCA-GUGCAGCAUAGCU-AUGUACGGACGGGAUA B.lupini 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACCCACCUC|AAAACGAGCAUUC B.lupini 4450 C|CU|------(------)---------U-GAGA|-AC|CGUGG-(AAGA B.lupini 4500 CC-A)CCACG-UUGAUAG|GCCGG|GUGUG-GAAGUGCA--(GUAA-)-- B.lupini 4550 UGCAU|GC-AGCUU|A|CCGGUACUAAUC-GUUCGAUUG|GCUUGA-UUG B.lupini 4600 C-------|ucucauuuu-------------------------------- B.lupini 4650 -------------------------------------------------- B.lupini 4700 -------------------------------------------------- B.lupini 4750 ---|||||| B.japoni.1 0 -------------------------------------------------- B.japoni.1 50 ----------------------------|---------AAUCAAGUGCC- B.japoni.1 100 U-UAAGGGUGUUCGGUGGAUG|CCUUGG|CGCUGAG|AG|GC-GAUGAAG B.japoni.1 150 GA|CGUG(CUAC-GC-)U|-GCG-AUAAGCCGUGGG|-GAGCU(G-CG-A B.japoni.1 200 AGA-)AGCUUUG-AUC-CAUGGAUU|UCCGAAUGGG(GAAA)CCC|ACCU B.japoni.1 250 U---(cgauagccggaacuccaagaccuuugucgaaagacaucggugugg B.japoni.1 300 gguu-----------cga---uca(gauga-------------------- B.japoni.1 350 -------------------------------------------)ugugag B.japoni.1 400 aagcc-aggccuuuagauuucgaucga-agagguuuuggauuuccgguua B.japoni.1 450 ucaagag-)---AAGGU-AUGAGACUUCU(GA-AUACA--UA)GGA-GGU B.japoni.1 500 -UUC--AAG-C-AAAC|CC-AGGGAACU|GA(AACA)UCUAAGUA-CCUG B.japoni.1 550 GAGGAAAGGACAUC(-AACA--)GAGAC|UCC-GUUAGUAGU(GGCGA)G B.japoni.1 600 CGA-ACG-CGGA-CCA-GGCC------------------------(---- B.japoni.1 650 -)------------------------------------------------ B.japoni.1 700 ------------------------------agugauacaucaaagac-aa B.japoni.1 750 ucgGAAc-cgguc(a-ggaaa)g-ccgggc|c(uca)gaGGG(UGAUAGC B.japoni.1 800 )CCCGU-Acga-guaaugcgaugauguauc-------------------- B.japoni.1 850 ---------------cACGAGUAAGGCGGGA(CACGUG-AAA)UCCUGUC B.japoni.1 900 UGAACGC-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----GUACUCCUC B.japoni.1 950 AGCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.japoni.1 1000 CACCCC(GACGA-)GGGGA--GUGAAA-UAG-ACCUGAAACCGG-ACACC B.japoni.1 1050 UACAA-A-CAGAUGGAGCCC-aag-a------------(---uacgu--) B.japoni.1 1100 -------------ucu-GGGUGACAUCGUACCU(UUU-GUAU|U)AUGG| B.japoni.1 1150 -GCCAGCGACUUAA-UUUA-ACGAGC-AAGCUUAAGCC-(-G-AUA)-GG B.japoni.1 1200 U-GUAGGCGCACG(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- B.japoni.1 1250 --------------------------C-AAG-UUCGUUGUAUUA-GACCC B.japoni.1 1300 GAAAC-CUA-GUGA-UCUAGCCAUGAG|CAGGUUGAAGGUGAGG(UAAC) B.japoni.1 1350 AC-UCACUGGAGGACCGAACG-GGUGCCU(-GUUGAAAA)AGGCU|CCG- B.japoni.1 1400 AUGAC-UUGUGGUUAGGGGU(-GAAAG)GCCAAUCAAACUGGGAAAUAGC B.japoni.1 1450 UGGUUCUCCGCGAAAGAUAU(-UUAG)GUAGCGC|-CUCGGAUGA---A| B.japoni.1 1500 -UAC|CUCAGG|GGGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGGAC(uu B.japoni.1 1550 acc)GUCUUACCAAACCCAA-CCAAACUCCGAA-UA-|CCU-G-A-G--A B.japoni.1 1600 GUAC----U|AUC-CGGGAGUCACAC--GGC-GGGU(GCUAAC)GUCCGU B.japoni.1 1650 -CGUG-GAGAGGG(-AAACAA-)CCCGGACCUACAGCUAAG-GC|CCCU- B.japoni.1 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGGAUGUG-GAAAUCCCAA- B.japoni.1 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA B.japoni.1 1800 AGC(GUAACA)GC|UCACUGGUcuaaaUAAGG-GUU-UC--UGC|GCCGA B.japoni.1 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|UAGG|gugug B.japoni.1 1900 aucc---(gcaa-------------------------------------- B.japoni.1 1950 -------------------------------------------------- B.japoni.1 2000 -------------------------------------------------- B.japoni.1 2050 -------------------------------------------------- B.japoni.1 2100 -------------------------------------------------- B.japoni.1 2150 -----------------------------------)----gggucacgc- B.japoni.1 2200 GG-UAGCGGAG|-----CGUU-CUG-UAAg-------------------- B.japoni.1 2250 -------------------------------------------------- B.japoni.1 2300 --------------------------------C-CUGC-GAAGGGCG-A- B.japoni.1 2350 C-UC(-GUGA-)GAG--CGCCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG B.japoni.1 2400 GC|AUG-AGUA--ACGACAAACACUG(UGAAAGA)CAGUGU|CGCC-GAA B.japoni.1 2450 AGUCCAAGGGUUCCUG-CGUAAAG-(UUAAU)CU|U-CGCAGGGUUAGC| B.japoni.1 2500 CGG|U-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAAUG B.japoni.1 2550 CAG-(UG-AAUAUU)C-UGCA|GC|ca-g-ug-gau-------------- B.japoni.1 2600 -------------------------------------------------- B.japoni.1 2650 -------------------------------------------------- B.japoni.1 2700 -------------------gg--uga-cgaau--cccguguguu-g-|uc B.japoni.1 2750 c-gac(cuuacuggau-ug---)gu-uggg-|------------------ B.japoni.1 2800 ----------------------------------(--------)--|--- B.japoni.1 2850 --------------------------------------|----|------ B.japoni.1 2900 -----------(-------)-----------------------cuuc-ga B.japoni.1 2950 aggg-----|guuccaggaaa-ua---------------------gcc-u B.japoni.1 3000 ccacau--cag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACUGGU- B.japoni.1 3050 A-(GAGUA)UACCAAGGCGA||UUGAGAGAACUAUGUUG----------- B.japoni.1 3100 ----AAGGAACUCGGCAAUUUACCUCCGUAAC(-UUCG)GGAUAAGGAGG B.japoni.1 3150 |cccauu----gcu--------------cgc(-gcaa-)gcg-------- B.japoni.1 3200 ------ggc---agugg-G|G(GCA)CAGACCAGGGG-GUGG|CAACU-- B.japoni.1 3250 ---GU(UUAACAAAA)ACACAGGGCUCUG|CGAAAUC(GCAA------)G B.japoni.1 3300 AUGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGA B.japoni.1 3350 GGAGAG----GU--------(G-CAA)-----------GC------CUUG B.japoni.1 3400 AAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.japoni.1 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.japoni.1 3500 AUGGCGUAAUGA-CUUCCCCGCUGUCUCCAACAUAGACUCA|GUGAAAUU B.japoni.1 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUUCCUGCGGU-CAGACGGAAAGA B.japoni.1 3600 CCCCGUGC|ACCU-UUACUGU|AGCUUUGCGCU|GGUAUUCGUGACUGUU B.japoni.1 3650 UGUGUAGAAUAGGUGGUAGGCUUUGAAG--CCGUGGC(GCCA)GCCAUGG B.japoni.1 3700 UGGAGCCGAAAU-GUGAAAUACCACC|CUAA-UGGUUAUGGAU-AUCUAA B.japoni.1 3750 -CCGCGU----CCCC(--UC-AGC)-GGGGACCGG-GACAGCGCAUGGUG B.japoni.1 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGAGUAAC)GGAGG B.japoni.1 3850 C|G|U|GCGAAGGUAGGC|UCAGAACGG(UCGGAAA)UCGUUCGUC-GA| B.japoni.1 3900 GU(A|UAAUG)GCAUAAGCCUGCCUGACUGCGAGAU(CUACGA)AUCGAG B.japoni.1 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) B.japoni.1 4000 UGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC B.japoni.1 4050 UGA--UGACGCCCAAGA(G-UCC-AUA)UCGACGGCG-UCGU-UUGGCAC B.japoni.1 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU B.japoni.1 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG B.japoni.1 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG B.japoni.1 4250 G-G|UG-UUGGAAUGUU|GA-|GAGGAUU-UGC--------------CCC B.japoni.1 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGUACCUCUGGUGGAGCUGU|U B.japoni.1 4350 GUCGC(GC-CA-)GCGGCA-GUGCAGCAUAGCU-AUGUACGGACGGGAUA B.japoni.1 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACCCACCUC|AAAACGAGCAUUC B.japoni.1 4450 C|CU|------(------)---------U-GAGA|-AC|CGUGG-(AAGA B.japoni.1 4500 CC-A)CCACG-UUGAUAG|GCCGG|GUGUG-GAAGUGCA--(GUAA-)-- B.japoni.1 4550 UGCAU|GC-AGCUU|A|CCGGUACUAAUC-GUUCGAUUG|GCUUGA-UUG B.japoni.1 4600 C-------|ucucauuuu~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.japoni.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.japoni.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.japoni.1 4750 ~~~|||||| B.japoni.2 0 -------------------------------------------------- B.japoni.2 50 ----------------------------|---------AAUCAAGUGCC- B.japoni.2 100 U-UAAGGGUGUUCGGUGGAUG|CCUUGG|CGCUGAG|AG|GC-GAUGAAG B.japoni.2 150 GA|CGUG(CUAC-GC-)U|-GCG-AUAAGCCGUGGG|-GAGCU(G-CG-A B.japoni.2 200 AGA-)AGCUUUG-AUC-CGCGGAUU|UCCGAAUGGG(GAAA)CCC|ACCU B.japoni.2 250 U---(cgauagccggaacuccaagaccuuugucgaaagacaucggugugg B.japoni.2 300 gguu-----------cga---cca(gauaa-------------------- B.japoni.2 350 -------------------------------------------)uggaag B.japoni.2 400 augccuaggccuuuagauuucgaucga-agagguuuuggauuuccgguua B.japoni.2 450 ucaagag-)---AAGGU-AUGAGACUUCU(GA-AUACA--UA)GGA-GGU B.japoni.2 500 -UUC--AAG-C-AAAC|CC-AGGGAACU|GA(AACA)UCUAAGUA-CCUG B.japoni.2 550 GAGGAAAGGACAUC(-AACA--)GAGAC|UCC-GUUAGUAGU(GGCGA)G B.japoni.2 600 CGA-ACG-CGGA-CCA-GGCC------------------------(---- B.japoni.2 650 -)------------------------------------------------ B.japoni.2 700 ------------------------------agugauacaucaaagac-aa B.japoni.2 750 ucgGAAc-caguc(a-ggaaa)g-cugggc|c(uca)gaGGG(UGAUAGC B.japoni.2 800 )CCCGU-Acga-guaaugcgaugauguauc-------------------- B.japoni.2 850 ---------------cACGAGUAAGGCGGGA(CACGUG-CAA)UCCUGUC B.japoni.2 900 UGAACGC-GGG-GG(GACCAC)CC-UCC-AAGCCUAA----GUACUCCUC B.japoni.2 950 AGCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.japoni.2 1000 CACCCC(GACGA-)GGGGA--GUGAAA-UAG-ACCUGAAACCGG-ACACC B.japoni.2 1050 UACAA-A-CAGAUGGAGCCC-aag-a------------(---uucgu--) B.japoni.2 1100 -------------ucu-GGGUGACAUCGUACCU(UUU-GUAU|U)AUGG| B.japoni.2 1150 -GCCAGCGACUUAA-UUUA-ACGAGC-AAGCUUAAGCC-(-G-AUA)-GG B.japoni.2 1200 C-GAAGGCGUAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- B.japoni.2 1250 --------------------------C-AAG-UUCGUUGUAUUA-GACCC B.japoni.2 1300 GAAAC-CUA-GUGA-UCUAGCCAUGAG|CAGGUUGAAGGUGAGG(UAAC) B.japoni.2 1350 AC-UCACUGGAGGACCGAACG-GGUGCCU(-GUUGAAAA)AGGCU|CCG- B.japoni.2 1400 AUGAC-UUGUGGUUAGGGGU(-GAAAG)GCCAAUCAAACUGGGAAAUAGC B.japoni.2 1450 UGGUUCUCCGCGAAAGAUAU(-UUAG)GUAUCGC|-CUCGGAUGA---A| B.japoni.2 1500 -UAC|CUCAGG|GGGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGGAC(uu B.japoni.2 1550 acc)GUCUUACCAAACCCAA-CCAAACUCCGAA-UA-|CCU-G-A-G--A B.japoni.2 1600 GUAC----U|AUC-CGGGAGUCACAC--GGC-GGGU(GCUAAC)GUCCGU B.japoni.2 1650 -CGUG-GAGAGGG(-AAACAA-)CCCGGACCUACAGCUAAG-GC|CCCU- B.japoni.2 1700 AAUUC-GUGG-C-UAA-GUG------GGAAAGGAUGUG-GAAAUCCCAA- B.japoni.2 1750 AACAACCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA B.japoni.2 1800 AGC(GUAACA)GC|UCACUGGUcuaaaUAAGG-GUU-UC--UGC|GCCGA B.japoni.2 1850 AGAU-GUAA-CGGGGCUCAAGCCAC-G|A|GCCGAAGCU|UAGG|gugug B.japoni.2 1900 aucc---(gcaa-------------------------------------- B.japoni.2 1950 -------------------------------------------------- B.japoni.2 2000 -------------------------------------------------- B.japoni.2 2050 -------------------------------------------------- B.japoni.2 2100 -------------------------------------------------- B.japoni.2 2150 -----------------------------------)----gggucacgc- B.japoni.2 2200 GG-UAGCGGAG|-----CGUU-CUG-UAAG-------------------- B.japoni.2 2250 -------------------------------------------------- B.japoni.2 2300 --------------------------------C-CUGC-GAAGGGCG-A- B.japoni.2 2350 C-UC(-GUGA-)GAG--CGCCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG B.japoni.2 2400 GC|AUG-AGUA--ACGACAAACACUG(UGAAAGA)CAGUGU|CGCC-GAA B.japoni.2 2450 AGUCCAAGGGUUCCUG-CGUAAAG-(UUAAU)CU|U-CGCAGGGUUAGC| B.japoni.2 2500 CGG|U-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAAUG B.japoni.2 2550 CAG-(UG-AAUAUU)C-UGCA|GC|ca-g-ug-gau-------------- B.japoni.2 2600 -------------------------------------------------- B.japoni.2 2650 -------------------------------------------------- B.japoni.2 2700 -------------------gg--uga-cgaau--cccguguguu-g-|uc B.japoni.2 2750 c-gac(cuuaauggau-ug---)gu-uggg-|------------------ B.japoni.2 2800 ----------------------------------(--------)--|--- B.japoni.2 2850 --------------------------------------|----|------ B.japoni.2 2900 -----------(-------)-----------------------cuuc-ga B.japoni.2 2950 aggg-----|guuccaggaaa-ua---------------------gcc-u B.japoni.2 3000 ccacau--uag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACUGGU- B.japoni.2 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACUAUGUUG----------- B.japoni.2 3100 ----AAGGAACUCGGCAAUUUACCUCCGUAAC(-UUCG)GGAUAAGGAGG B.japoni.2 3150 |cccauu----gcu--------------cgc(-gcaa-)gcg-------- B.japoni.2 3200 ------ggc---agugg-G|G(GCA)CAGACCAGGGG-GUGG|CAACU-- B.japoni.2 3250 ---GU(UUAACAAAA)ACACAGGGCUCUG|CGAAAUC(GCAA------)G B.japoni.2 3300 AUGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGA B.japoni.2 3350 GGAGAG----GU--------(G-CAA)-----------GC------CUUG B.japoni.2 3400 AAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.japoni.2 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.japoni.2 3500 AUGGCGUAAUGA-CUUCCCCGCUGUCUCCAACAUAGACUCA|GUGAAAUU B.japoni.2 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUUCCUGCGGU-CAGACGGAAAGA B.japoni.2 3600 CCCCGUGC|ACCU-UUACUGU|AGCUUUGCGCU|GGUAUUCGUGACUGUU B.japoni.2 3650 UGUGUAGAAUAGGUGGUAGGCUUUGAAG--CCGUGGC(GCCA)GCCAUGG B.japoni.2 3700 UGGAGCCGAAAU-GUGAAAUACCACC|CUAA-UGGUUAUGGAU-AUCUAA B.japoni.2 3750 -CCGCGU----UCCC(--UC-AGC)-GGGAACCGG-GACAGCGCAUGGUG B.japoni.2 3800 GG-CAGUUUGACUG(GGG)CGGUC|GCCUCC(CAA-AGAGUAAC)GGAGG B.japoni.2 3850 C|G|U|GCGAAGGUAGGC|UCAGAACGG(UCGGAAA)UCGUUCGUC-GA| B.japoni.2 3900 GU(A|UAAUG)GCAUAAGCCUGCCUGACUGCGAGAU(CUACGA)AUCGAG B.japoni.2 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) B.japoni.2 4000 UGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC B.japoni.2 4050 UGA--UGACGCCCAAGA(G-UCC-AUA)UCGACGGCG-UCGU-UUGGCAC B.japoni.2 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GGAGA---A)-GGU B.japoni.2 4150 CCCAAGGGU|UCGGC(UGUUC)GC-CGAUUAAAGUGGUACG-UGAGCUGG B.japoni.2 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG B.japoni.2 4250 G-G|UG-UUGGAAUGUU|GA-|GAGGAUU-UGC--------------CCC B.japoni.2 4300 (UAGUAC(GAGA)GGACC)GGGGUGA|ACGUACCUCUGGUGGAGCUGU|U B.japoni.2 4350 GUCGC(GC-CA-)GCGGCA-GUGCAGCAUAGCU-AUGUACGGACGGGAUA B.japoni.2 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACCCACCUC|AAAACGAGCAUUC B.japoni.2 4450 C|CU|------(------)---------U-GAGA|-AC|CGUGG-(AAGA B.japoni.2 4500 CC-A)CCACG-UUGAUAG|GCCGG|AUGUG-GAAGUGCA--(GUAA-)-- B.japoni.2 4550 UGCAU|GC-AGCUU|A|CCGGUACUAAUC-GUUCGAUUG|GCUUGA-UUG B.japoni.2 4600 C-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.japoni.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.japoni.2 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.japoni.2 4750 ~~~|||||| A.vitis 0 -------------------------------------------------- A.vitis 50 ----------------------------|----------AUUAAGUGGA- A.vitis 100 A-UAAGGGCAUUUGGUGGAUG|CCUUGG|CAUGCAC|AG|GC-GAUGAAG A.vitis 150 GA|CGUG(AUAC-GC-)U|-GCG-AUAAGCCGUGGG|-GAGCU(G-CG-A A.vitis 200 AUA-)AGCUUUG-AUC-CAUGGAUU|UCCGAAUGGG(GAAA)CCC|ACCU A.vitis 250 U---(agauaucuagaaaaucuguuuugcuagaccaaucuguuuugaccg A.vitis 300 guugugugggacgucccauacagaccgguaggccgucgccaagcguuugg A.vitis 350 cgcaccgucuguagcgcaggcucgaagagccgacagcgugaagacaaaac A.vitis 400 aaaccccgaguguggggcgaua-ggguucggcaaaagagguuucuagaua A.vitis 450 ucgcaaau)---AAGGU-AUCU-UACCUU(GA-AUACA--UA)GGG-GUA A.vitis 500 -A-G--AAG-C-GAAC|UC-GGGGAACU|GA(AACA)UCUAAGUA-CCCG A.vitis 550 AAGGAAAGGACAUC(-AACC--)GAGAC|UCC-GCAAGUAGU(GGCGA)G A.vitis 600 CGA-ACG-CGGA-CCA-GGCC------------------------(---- A.vitis 650 -)------------------------------------------------ A.vitis 700 ------------------------------aguggcaaugaggaauaa-a A.vitis 750 gcgGAAc-aag-u(u-ggaaa)g-cuuggc|c(aua)guGGG(UGACAGC A.vitis 800 )CCCGU-Acgc-guagaacacucauuguc--------------------- A.vitis 850 ---------------cuaGAGUAGGGCGGGA(CACGUG-AAA)UCCUGUU A.vitis 900 CGAACAU-GGG-GA(GACCAC)UC-UCC-AAGCCUAA----GUACUCGUG A.vitis 950 CAUGACCGAUAGCG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G A.vitis 1000 CACCCC(GACAA-)GGGGA--GUGAAA-UAGAACCUGAAACCGG-AUGCC A.vitis 1050 UACAA-A-CAGUAGGAGGGC------------------(----gaaa--) A.vitis 1100 -----------------GCCUGACUGCGUACCU(UUU-GUAU|A)AUGG| A.vitis 1150 -GUCAACGACUUAG-UGUA-ACUAGC-AAGCUUAAGCC-(-G-GUA)-GG A.vitis 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUGU(UAA-UA)GCGCGa-------- A.vitis 1250 -------------------------uu-gaG-UUAGUUGCAUUA-GACCC A.vitis 1300 GAAAC-CGA-GUGA-UCUAGCCAUGAG|CAGGUUGAAGGUUGGG(UAAC) A.vitis 1350 AC-CAACUGGAGGACCGAACC-CGCAUCU(-GUUGCAAU)AGAUU|GGG- A.vitis 1400 AUGAC-UUGUGGUUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAAAUAGC A.vitis 1450 UGGUUCUCCGCGAAAACUAU(-UUAG)GUAGUGC|-GUCGAUcga---A| A.vitis 1500 -UAC|CUCAGG|GGGUAG|AGC-ACUGG-AUGGGCUA-UG|-GGGAC(uc A.vitis 1550 acc)GUCUUACUGAUCCUAA-CCAAACUCCGAA-UA-|CCU-G-A-G--A A.vitis 1600 GUAC----U|AAU-CGGCAGACACAC--GGC-GGGU(GCUAAC)GUCCGU A.vitis 1650 -CGUG-AAGAGGG(-CAACAA-)CCCUGACCUCCAGCUAAG-GU|CCCC- A.vitis 1700 AAGUC-AUGG-C-UAA-GUG------GGAAAGGAUGUG-AGGAUCCCAA- A.vitis 1750 AACAACCAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA A.vitis 1800 AGC(GUAACA)GC|UCACUGGUcuaaauAAGG-GUC-UU--UGC|GCCGA A.vitis 1850 AAAU-GUAA-CGGGGCUAAAGCCAU-G|C|ACCGAAGCU|GAGG|augug A.vitis 1900 cac----(guaa-------------------------------------- A.vitis 1950 -------------------------------------------------- A.vitis 2000 -------------------------------------------------- A.vitis 2050 -------------------------------------------------- A.vitis 2100 -------------------------------------------------- A.vitis 2150 -----------------------------------)-----guguacgu- A.vitis 2200 GG-UAGCGGAG|-----CGUU-CCG-UAA--------------------- A.vitis 2250 -------------------------------------------------- A.vitis 2300 --------------------------------G-CCUG-UGAAGGGACA- A.vitis 2350 G-UC(-GUGA-)GAC--AUCCUGG|AGGUAU-CGGAAGUGCGAAUGU-UG A.vitis 2400 AC|AUG-AGUA--ACGAUAAAGGGGG(UGAGAGA)CCCCCU|CGCC-GAA A.vitis 2450 AGACCAAGGGUUCCUG-CUUAAAG-(UUAAU)CU|G-AGCAGGGUUAGC| A.vitis 2500 CGG|c-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGUCGAUGG-GAACC A.vitis 2550 ACG-(UU-AAUAUU)C-GUGG|GC|cu-g-gu-ggu-------------- A.vitis 2600 -------------------------------------------------- A.vitis 2650 -------------------------------------------------- A.vitis 2700 -------------------ag--uga-cggau--cacacaaauu-g-|ua A.vitis 2750 c-agu(cuuacuggau-ug---)au-ugug-|------------------ A.vitis 2800 ----------------------------------(--------)--|--- A.vitis 2850 --------------------------------------|----|------ A.vitis 2900 -----------(-------)-----------------------cagu-gg A.vitis 2950 agug-----|guuccaggaaa-ua---------------------gcu-c A.vitis 3000 caccgu-auag|a|CCGUACCCGAAACC(GACACA)GG|UGG-UCAGGU- A.vitis 3050 A-(GAGUA)UACCAAGGCGC||UUGAGAGAACUAUGUUG----------- A.vitis 3100 ----AAGGAACUCGGCAAAUUGCACGCGUAAC(-UUCG)GAAGAAGCGUG A.vitis 3150 |ACCCCU----uuu--------------uac(-gcaa-)gug-------- A.vitis 3200 ------gag---AGGGG-U|G(GCA)CAGACCAGGGG-GUAG|CGACU-- A.vitis 3250 ---GU(UUAUCAAAA)ACACAGGGCUCUG|CGAAGUC(GCAA------)G A.vitis 3300 ACGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAAA A.vitis 3350 GGAGAG----GU--------(G-CAA)-----------GC------UUUG A.vitis 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( A.vitis 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA A.vitis 3500 AUGGCGUAACGA-CUUCCCCGCUGUCUCCAACAUAGACUCA|GUGAAAUU A.vitis 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUUCCUGCGGU-CAGACGGAAAGA A.vitis 3600 CCCCGUGC|ACCU-UUACUAU|AGCUUUACACU|GGCAUUCGUGUCGGCA A.vitis 3650 UGUGUAGGAUAGGUGGUAGGCUUUGAAG--CUUGGAC(GCCA)GUUCGAG A.vitis 3700 UGGAGCCAUC-C-UUGAAAUACCACC|CUUA-UCGUcAUGGAU-GUCUAA A.vitis 3750 -CCGCGG----UCCG(--UU-AUC)-CGGAUCCGG-GACAGUGUAUGGUG A.vitis 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(GAA-AGAGUAAC)GGAGG A.vitis 3850 C|G|C|GCGAUGGUGGGC|UCAGACCGG(UCGGAAA)UCGGUCGUC-GA| A.vitis 3900 GU(G|CAAUG)GCAUAAGCCCGCCUGACUGCGAGAC(UGACAA)GUCGAG A.vitis 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) A.vitis 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC A.vitis 4050 UGA--UGACCCCCAAGA(G-UCC-AUA)UCGACGGGG-UUGU-UUGGCAC A.vitis 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU A.vitis 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-UGAGCUGG A.vitis 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG A.vitis 4250 G-G|UG-UAGGAAUAUU|GA-|CAGGAUC-UGU--------------CCC A.vitis 4300 (UAGUAC(GAGA)GGACC)GGGAUGG|ACAUAUCUCUGGUGGACCUGU|U A.vitis 4350 GUCGU(GC-CA-)ACGGCA-UAGCAGGGUAGCU-AUAUAUGGAAUGGAUA A.vitis 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAACCAACCUG|AAAACGAGUAUUC A.vitis 4450 C|CU|------(------)--------AU-CAGA|-GC|CGUGG-(AAGA A.vitis 4500 CG-A)CCACG-UUGAUAG|GACGG|GUGUG-GAAGCAGG--(GUAA-)-- A.vitis 4550 CCUGC|GA-AGCUU|A|CCGUUACUAAUA-GCUCGAUUG|GCUUAA-UCG A.vitis 4600 U-------|----------------------------------------- A.vitis 4650 -------------------------------------------------- A.vitis 4700 -------------------------------------------------- A.vitis 4750 ---|||||| B.bacillif 0 -------------------------------------------------- B.bacillif 50 ----------------------------|----------AUCAAGUGUC- B.bacillif 100 U-UAAGGGCAUUUGGUGGAUG|CCUUGG|CAUGCAC|AG|GC-GAUGAAG B.bacillif 150 GA|CGUG(AUAC-GC-)U|-GCG-AUAAGCUACGGG|-GAGGU(G-CG-A B.bacillif 200 AUA-)CCCUUUG-AUC-CGUAGAUU|UCCGAAUGGG(GCAA)CCC|ACCU B.bacillif 250 U---(ugacugcuggaaacguuaagcuguuuu------------------ B.bacillif 300 ------------------------(gcaa)aagacaguuuagguuucuag B.bacillif 350 uugucu-------------------------------------------- B.bacillif 400 -------------------------------------------------- B.bacillif 450 ---uuaau)---AAGGU-AUCU-UCAUCU(GA-AUAaaa-UA)GGG-UGU B.bacillif 500 -aaG--AAG-C-GAAC|GC-AGGGAACU|GA(AACA)UCUAAGUA-CCUG B.bacillif 550 UAGGAAAGGACAUC(-AACC--)GAGAC|UCC-GUUAGUAGU(GGCGA)G B.bacillif 600 CGA-ACG-CGGA-CCA-GGCC------------------------(---- B.bacillif 650 -)------------------------------------------------ B.bacillif 700 ------------------------------aguggcuuaaauuuagaaaa B.bacillif 750 guaGAAu-cga-u(u-ggaaa)g-ucgaac|c(aaa)gaGGG(UGAUAGU B.bacillif 800 )CCCGU-Auac-guaaaucugauuuaaguc-------------------- B.bacillif 850 ---------------cuuGAGUAAGGCGGGA(CACGUG-AAA)UCCUGUC B.bacillif 900 UGAACAU-GGG-UC(GACCAC)GA-UCC-AAGCCUAA----GUACUCGUG B.bacillif 950 CAUGACCGAUAGCG-CAC-CAGUACC(GUGA)-GGGA-AAGGUGAAAA-G B.bacillif 1000 UACCCC(GACGA-)GGGGA--GUGAAA-UAGUACCUGAAACCGA-AUGCC B.bacillif 1050 UACAA-A-CAGUCGGAGCCC-aag-a------------(---uuugu--) B.bacillif 1100 -------------ucu-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.bacillif 1150 -GUCAGCGACUUAG-UCUA-ACGAGC-AAGCUUAAGCC-(-G-AUA)-GG B.bacillif 1200 U-GUAGGCGUAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- B.bacillif 1250 --------------------------u-caG-UUCGUUGGAUUA-GACCC B.bacillif 1300 GAAAC-CGA-GUGA-UCUAGCCAUGAG|CAGGCUGAAGGUAAGG(UAAC) B.bacillif 1350 AC-UUACUGGAGGGCCGAACC-CGUAUCU(-GUUGCAAU)AGAUU|GGG- B.bacillif 1400 AUGAC-UUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAAAUAGC B.bacillif 1450 UGGUUCUCCGCGAAAUCUAU(-UUAG)GUAGAGC|-GUUAGUUGA---A| B.bacillif 1500 -UUC|UCCAGG|GGGUAG|AGC-ACUGG-AUGGGCUA-GG|-GGUCC(uc B.bacillif 1550 acc)GGAUUACCAAACCUAA-CCAAACUCCGAA-UA-|CCU-G-G-A--A B.bacillif 1600 GAAC----U|GAC-UGGCAGACACAC--GGC-GGGU(GCUAAC)GUCCGU B.bacillif 1650 -CGUG-GAAAGGG(-CAACAA-)CCCUAACCACCAUCUAAG-GU|CCCC- B.bacillif 1700 AAGUU-AUGG-C-UAA-GUG------GGAAAGGAUGUG-AGGAUCCCAA- B.bacillif 1750 AACAACCAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA B.bacillif 1800 AGC(GUAACA)GC|UCACUGGUcuaaaUAAGG-GUC-UU--UGC|GCCGA B.bacillif 1850 AAAU-GUAA-CGGGGCUAAAGCCAU-A|C|ACCGAAGCU|GUGG|auuua B.bacillif 1900 cuc----(uuau-------------------------------------- B.bacillif 1950 -------------------------------------------------- B.bacillif 2000 -------------------------------------------------- B.bacillif 2050 -------------------------------------------------- B.bacillif 2100 -------------------------------------------------- B.bacillif 2150 -----------------------------------)-----gaguaagu- B.bacillif 2200 GG-UAGCGGAG|-----CGUU-CCG-UAAg-------------------- B.bacillif 2250 -------------------------------------------------- B.bacillif 2300 --------------------------------C-CUGU-GAAGGGAG-A- B.bacillif 2350 C-UC(-GCGA-)GAG--CUCCUGG|AGGUAU-CGGAAGUGAGAAUGC-UG B.bacillif 2400 AC|AUG-AGUA--ACGAUAAAGGGAG(UGAGAGA)CUCCCU|CGCC-GAA B.bacillif 2450 AGUCCAAGGGUUCCUG-CUUAAAG-(UUAAU)CU|G-AGCAGGGUGAGU| B.bacillif 2500 CGG|C-CCCUAAGGCGAGGCC(GAAA)-G-GCGU-AGUCGAUGG-GAACC B.bacillif 2550 ACG-(UU-AAUAUU)C-GUGG|AC|cu-g-ug-gga-------------- B.bacillif 2600 -------------------------------------------------- B.bacillif 2650 -------------------------------------------------- B.bacillif 2700 -------------------ag--uga-cggau-uaggaa-uauu-g-|ua B.bacillif 2750 a-ggu(cuuauuggau-ug---)au-cuug-|------------------ B.bacillif 2800 ----------------------------------(--------)--|--- B.bacillif 2850 --------------------------------------|----|------ B.bacillif 2900 -----------(-------)-----------------------cagu-ag B.bacillif 2950 aaua-----|aucccaggaaa-uagc-----------------------u B.bacillif 3000 cccacauauag|a|CCGUACCCGAAACC(GACACA)GG|UGG-ACAGGU- B.bacillif 3050 A-(GAGAA)UACCAAGGCGC||UUGAGAGAACUACGUUG----------- B.bacillif 3100 ----AAGGAACUCGGCAAAUUGCACGCGUAAC(-UUCG)GAAGAAGCGUG B.bacillif 3150 |accc------uuu------------agcgg(-gcaa-)ccguu------ B.bacillif 3200 ------aga-----ggg-U|G(GCA)CAGACCAGGGG-GUAG|CGACU-- B.bacillif 3250 ---GU(UUACCAAAA)ACACAGGGCUCUG|CGAAGUC(GCAA------)G B.bacillif 3300 ACGAUGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAGA B.bacillif 3350 GGAGAU----GU--------(G-CAA)-----------GC------AUUG B.bacillif 3400 AAUUGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.bacillif 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.bacillif 3500 AUGGCGUAACGA-CUUCCCCGCUGUCUCCAACGUAGACUCA|GUGAAAUU B.bacillif 3550 |GAAUUCCCCCG(UGAAGAUG)CGGGGUUCCUGCGGU-UAGACGGAAAGA B.bacillif 3600 CCCCGUGC|ACCU-UUACUAU|AGCUUUACACU|GGCAUUUGUGUCGGCA B.bacillif 3650 UGUGUAGGAUAGGUGGUAGACUUUGAAG--CAGGGGC(GCUA)GCCCUUG B.bacillif 3700 UGGAGUCAUC-C-UUGAAAUACCACC|CUUA-CCGACAUGGAU-GUCUAA B.bacillif 3750 -CUGCAG----UCCG(--UU-AUC)-CGGAUUCAA-GACAGUGUAUGGUG B.bacillif 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(UAA-AGAGUAAC)GGAGG B.bacillif 3850 C|G|C|GCGAAGGUAGGC|UCAGAACGG(UCGGAAA)UCGUUUGUU-GA| B.bacillif 3900 GU(G|CAAUG)GCAUAAGCCUGCCUGACUGUGAGAC(UGACAA)GUCGAG B.bacillif 3950 CAGAGUC(GAAA)GA-CGGU|CAUAGUGAUCCGGUGGUCCCG(UGUGGA) B.bacillif 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC B.bacillif 4050 UGA--UGACCCCCAAGA(G-UCC-AUA)UCGACGGGG-UUGU-UUGGCAC B.bacillif 4100 CUCGAUGUC|GACU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU B.bacillif 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-UGAGUUGG B.bacillif 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG B.bacillif 4250 G-G|UG-UAGGAAUAUU|GA-|CAGGAUC-UGU--------------CCC B.bacillif 4300 (UAGUAC(GAGA)GGACC)GGGAUGG|ACGUAUCUCUGGUGGACCUGU|U B.bacillif 4350 GUGGC(GC-CA-)GCCGCA-UAGCAGGGUAGCU-AUAUACGGACGGGAUA B.bacillif 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAACCCACCUG|AAAACGAGUAUUC B.bacillif 4450 C|CU|------(------)---------U-GAGA|-AC|CGUGG-(UAGA B.bacillif 4500 CC-A)CCACG-UUGAUAG|GUCAG|GCGUG-GAAGUGUG--(GUAA-)-- B.bacillif 4550 CACAU|GA-AGCUU|A|CUGAUACUAAUA-GUUCGAUUG|GCUUGA-UCG B.bacillif 4600 U-------|ucucauu]u~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.bacillif 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.bacillif 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.bacillif 4750 ~~~|||||| Z.ramigera 0 -------------------------------------------------- Z.ramigera 50 ----------------------------|--ugagaacGAUUAAGUgucg Z.ramigera 100 --UAAGGGCAAUUGGUGGAUG|CCUUGG|CAUGCAC|AG|GC-GAUGAAG Z.ramigera 150 GA|CGUG(AUAC-GC-)U|-GCG-AUAAGCCGUGGG|-GAGCU(G-CG-A Z.ramigera 200 AUG-)AGCUUUG-AUC-CAUGGAUU|UCCGAAUGGG(GAAA)CCC|ACCU Z.ramigera 250 UA--(aaugcuuggagaauuuaaguugcuc-------------------- Z.ramigera 300 ------------------------(guaa)gggcggcuuagguuuccaag Z.ramigera 350 cauu---------------------------------------------- Z.ramigera 400 -------------------------------------------------- Z.ramigera 450 ----gaaa)--UAAGGU-AUCUUACUUUC(GA-AUACA--UA)GGG-GUA Z.ramigera 500 -a-g--aaG-C-GAAC|GC-AGGGAACU|GA(AACA)UCUAAGUA-CCUG Z.ramigera 550 CAGGAAAGGACAUC(-AACC--)GAGAC|UCC-GCAAGUAGU(GGCGA)G Z.ramigera 600 CGA-ACG-CGGA-CCA-GGCC------------------------(---- Z.ramigera 650 -)------------------------------------------------ Z.ramigera 700 -------------------------------aguggcaaugcugaauaaa Z.ramigera 750 gugGAAc-gga-a(u-ggaaa)g-uccgGC|C(UUA)GCGGG(UGAUAGC Z.ramigera 800 )CCCGU-Acac-guagaacaggcauuguc--------------------- Z.ramigera 850 ---------------cuuGAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC Z.ramigera 900 UGAACAU-GGG-GA(GACCAC)UC-UCC-AAGCCUAA----GUACUCGUG Z.ramigera 950 CAUGACCGAUAGCG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G Z.ramigera 1000 CACCCC(GACAA-)GGGGA--GUGAAA-UAGAACCUGAAACCGG-UUGCC Z.ramigera 1050 UACAA-G-CAGUCGGAGGCC------------------(----gcaa--) Z.ramigera 1100 -----------------ggCUGACGGCGUACCU(UUU-GUAU|A)AUGG| Z.ramigera 1150 -GUCAACGACUUAG-UGUA-ACUAGC-AAGCUUAAGCC-(-G-GUA)-GG Z.ramigera 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-CA)GGGCGU-------- Z.ramigera 1250 --------------------------u-caG-UUAGUUGCAUUA-GACCC Z.ramigera 1300 GAAAC-CGA-GUGA-UCUAGCCAUGAG|CAGGUUGAAGGUUGGG(UAAC) Z.ramigera 1350 AC-CAACUGGAGGACCGAACC-CGCAUCU(-GUUGCAAU)AGAUU|GGG- Z.ramigera 1400 AUGAC-UUGUGGCUAGGGGU(-GAAAG)GCCAAUCAAACUCGGAGAUAGC Z.ramigera 1450 UGGUUCUCCGCGAAAUCUAU(-UUAG)GUAGAGC|-GUCGAccga---A| Z.ramigera 1500 -UAC|CCUCGG|GGGUAG|AGC-ACUGG-AUGGGCUA-UG|-GGGAC(uc Z.ramigera 1550 acc)GUCUUACUGAUCCUAA-CCAAACUCCGAA-UA-|CCG-A-G-G--a Z.ramigera 1600 guac----u|agu-CGGCAGACACAC--GGC-GGGU(GCUAAC)GUCCGU Z.ramigera 1650 -CGUG-AAAAGGG(-CAACAA-)CCCUGACCUCCAGCUAAG-GU|CCCC- Z.ramigera 1700 AAGUC-AUGG-C-UAA-GUG------GGAAAGGAUGUG-AGACUCCCAA- Z.ramigera 1750 AACAACCAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA Z.ramigera 1800 AGC(GUAACA)GC|UCACUGGUcuaauUAAGG-GGU-UU--UGC|GCCGA Z.ramigera 1850 AAAU-GUAA-CGGGGCUAAAGCCAU-G|C|ACCGAAGCU|GAGG|auugg Z.ramigera 1900 ac-----(gcaa-------------------------------------- Z.ramigera 1950 -------------------------------------------------- Z.ramigera 2000 -------------------------------------------------- Z.ramigera 2050 -------------------------------------------------- Z.ramigera 2100 -------------------------------------------------- Z.ramigera 2150 -----------------------------------)------guccagu- Z.ramigera 2200 GG-UAGCGGAG|-----CGUU-CCG-UAA--------------------- Z.ramigera 2250 -------------------------------------------------- Z.ramigera 2300 --------------------------------G-CCUG-CGAAGGAG-G- Z.ramigera 2350 ACCC(-GUGA-)GG---CCUCUGG|AGGUAU-CGGAAGUGCGAAUGU-UG Z.ramigera 2400 AC|AUG-AGUA--ACGAUAAAGGGAG(UGAGAGA)CUCCCU|CGCC-GAA Z.ramigera 2450 AGACCAAGGGUUCCUG-CUUAAAG-(UUAAU)CU|G-AGCAGGGUUAGC| Z.ramigera 2500 CGG|C-CCCUAAGACGAGGCG(GACA)-C-GCGU-AGUCGAUGG-GAACC Z.ramigera 2550 ACG-(UU-AAUAUU)C-GUGG|GC|cu-g-gu-ggu-a------------ Z.ramigera 2600 -------------------------------------------------- Z.ramigera 2650 -------------------------------------------------- Z.ramigera 2700 --------------------g--uga-cggau--ugcguaacuu-g-|uu Z.ramigera 2750 c-auc(cuuauuggau-ug---)gg-uggg-|------------------ Z.ramigera 2800 ----------------------------------(--------)--|--- Z.ramigera 2850 --------------------------------------|----|------ Z.ramigera 2900 -----------(-------)-----------------------cagg-ga Z.ramigera 2950 agcg-----|guuccaggaaa-uagc-----------------------u Z.ramigera 3000 ccaccguauag|a|CCGUACCCGAAACC(GACACA)GG|UGG-UCAGGU- Z.ramigera 3050 A-(GAGCA)UACCAAGGCGC||UUGAGAGAACUGCGUUG----------- Z.ramigera 3100 ----AAGGAACUCGGCAAAUUGCACGCGUAAC(-UUCG)GAAGAAGCGUG Z.ramigera 3150 |accc------caa------------ggcac(-gcaa-)guguu------ Z.ramigera 3200 ------uug-----ggg-U|G(GCA)CAGACCAGGGG-GUAG|CGACU-- Z.ramigera 3250 ---GU(UUAUCAAAA)ACACAGGGCUCUG|CGAAGUC(GCAA------)G Z.ramigera 3300 ACGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAGA Z.ramigera 3350 GGAGAG----GU--------(G-CAA)-----------GC------UUUG Z.ramigera 3400 AAUCGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( Z.ramigera 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA Z.ramigera 3500 AUGGCGUAACGA-CUUCCCCGCUGUCUCCAACGCAGACUCA|GUGAAAUU Z.ramigera 3550 |GAAUUCC-CCG(UGAAGAUG)CGGGGUUCCUGCGGU-UAGACGGAAAGA Z.ramigera 3600 CCCCGUGC|ACCU-UUACUAU|AGCUUUACACU|GGCAUUCGUGUCGGCA Z.ramigera 3650 UGUGUAGGAUAGGUGGUAGGCUUUGAAG--CAGGGAC(GCCA)GUUUCUG Z.ramigera 3700 UGGAGCCAUC-C-UUGAAAUACCACC|CUUA-UCGUCAUGGAU-GUCUAA Z.ramigera 3750 -CCGCGG----UCCG(--UU-AUC)-CGGAUCCGG-GACCGUGUAUGGUG Z.ramigera 3800 GG-UAGUUUGACUG(GGG)CGGUC|GCCUCC(GAA-AGAGUAAC)GGAGG Z.ramigera 3850 C|G|C|GCGAUGGUGGGC|UCAGACCGG(UCGGAAA)UCGGUCGUC-GA| Z.ramigera 3900 GU(G|CAAUG)GCAUAAGCCCGCCUGACUGCGAGAC(UGACAA)GUCGAG Z.ramigera 3950 CAGAGAC(GAAA)GU-CGGU|CAUAGUGAUCCGGUGGUCCCG(CGUGGA) Z.ramigera 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC Z.ramigera 4050 UGA--UGACCCCCAAGA(G-UCC-AUA)UCGACGGGG-UUGU-UUGGCAC Z.ramigera 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GGAGC---A)-GGU Z.ramigera 4150 CCCAAGGGU|UUGGC(UGUUC)GC-CAAUUAAAGCGGUACG-UGAGCUGG Z.ramigera 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG Z.ramigera 4250 G-G|UG-UAGGAAUAUU|GA-|CAGGAUC-UGU--------------CCC Z.ramigera 4300 (UAGUAC(GAGA)GGACC)GGGAUGG|ACAUAUCUCUGGUGGACCUGU|U Z.ramigera 4350 GUCCU(GC-CA-)AGGGCA-UAGCAGGGUAGCU-AUAUAUGGAAUGGAUA Z.ramigera 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAACCAACCUG|AAAACGAGUAUUC Z.ramigera 4450 C|CU|------(------)---------U-GAGA|-GC|CGUGG-(AAGA Z.ramigera 4500 CG-A)CCACG-UUGAUAG|GCCGG|GUGUG-GAAGCGCA--(GCAA-)-- Z.ramigera 4550 UGUGU|GA-AGCUU|A|CCGGUACUAAUA-GCUCGAUUG|GCUUGA-UCG Z.ramigera 4600 U-------|ucucauugu-------------------------------- Z.ramigera 4650 -------------------------------------------------- Z.ramigera 4700 -------------------------------------------------- Z.ramigera 4750 ---|||||| PURPLE.BET 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ PURPLE.BET 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ PURPLE.BET 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ PURPLE.BET 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~----------------------- PURPLE.BET 300 -----~~~~~~~~~~~~~~~~~~~~~------------------------ PURPLE.BET 350 -------------------------------------------------- PURPLE.BET 400 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~~)~~~~~~ PURPLE.BET 500 ~~~~~~~~~-~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ PURPLE.BET 550 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~ PURPLE.BET 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ PURPLE.BET 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 700 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ PURPLE.BET 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ PURPLE.BET 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ PURPLE.BET 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PURPLE.BET 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| PURPLE.BET 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PURPLE.BET 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-~~~~~ PURPLE.BET 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ PURPLE.BET 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| PURPLE.BET 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ PURPLE.BET 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ PURPLE.BET 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ PURPLE.BET 1700 ~~~~~~~~~~~~-~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- PURPLE.BET 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ PURPLE.BET 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~-|~~~~~ PURPLE.BET 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ PURPLE.BET 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2200 -~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- PURPLE.BET 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ PURPLE.BET 2400 ~~|~~~~-~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ PURPLE.BET 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| PURPLE.BET 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ PURPLE.BET 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ PURPLE.BET 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 2700 ~~~~~~~~~~~------~~~~~--~~-~~~~~~~~~~~~-~~~~-~~~~~ PURPLE.BET 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- PURPLE.BET 2800 --~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ PURPLE.BET 2850 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ PURPLE.BET 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ PURPLE.BET 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3000 ~~~~~~~-~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- PURPLE.BET 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PURPLE.BET 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~- PURPLE.BET 3250 ---~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ PURPLE.BET 3300 ~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~-~~~~~ PURPLE.BET 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3400 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~|~( PURPLE.BET 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ PURPLE.BET 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ PURPLE.BET 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PURPLE.BET 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ PURPLE.BET 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ PURPLE.BET 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ PURPLE.BET 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) PURPLE.BET 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ PURPLE.BET 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~ PURPLE.BET 4250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4300 ~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ PURPLE.BET 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4550 ~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.BET 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|| PURPLE.BET 4750 ||~|||||| N.meningit 0 -------------------------------------------------- N.meningit 50 ----------------------------|---------AGUCAAGUGAA- N.meningit 100 --UAAGUGCAUCAGGUGGAUG|CCUUGG|CGAUGAU|AG|GC-GACGAAG N.meningit 150 GA|CGUG(UAAG-CC-)U|-GCG-AAAAGCGCGGGG|-GAGCU(G-GCAA N.meningit 200 UAA-)AGCAAUG-AUC-CCGCGAUG|UCCGAAUGGG(GAAA)CCC|acug N.meningit 250 ca--(--------------------------------------------- N.meningit 300 -------------------------------------------------- N.meningit 350 -------------------------------------------------- N.meningit 400 -------------------------------------------------- N.meningit 450 ---uucug)--ugcagu-AUCC-UAAGUU(GA-AUACA--UA)GAC-UUA N.meningit 500 -GAG--AAG-C-GAAC|CC-GGAGAACU|GA(ACCA)UCUAAGUA-CCCG N.meningit 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GCAAGUAGU(GGCGA)G N.meningit 600 CGA-ACG-CGGA-GGA-GCCU------------------------(---- N.meningit 650 -)------------------------------------------------ N.meningit 700 --------------------------guacgu-aauaacugucgagau-a N.meningit 750 gaaGAAc-aag-c(u-gggaa)g-cuugAC|c(aua)guGGG(UGACAGU N.meningit 800 )CCCGU-Auuc-gaaaucucaac-agcgguacuaagcguac--------- N.meningit 850 ---------------GAAAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC N.meningit 900 UGAAUAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCAUC N.meningit 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G N.meningit 1000 AACCCC(GG-GA-)GGGAA--GUGAAA-CAGAACCUGAAACCUG-AUGCA N.meningit 1050 UACAA-A-CAGUGGGAGCGC--C---------------(----cuaga-) N.meningit 1100 ---------------G-GUGUGACUGCGUACCU(UUU-GUAU|A)AUGG| N.meningit 1150 -GUCAACGACUUAC-AUUC-AGUAGC-GAGCUUAACC--(-GAAUA)--G N.meningit 1200 G-GGAGGCGUAGG(GAAA-)CCGAGUCU(UAA-UA)GGGCGA-------- N.meningit 1250 --------------------------u-gaG-UUGCUGGGUGUA-GACCC N.meningit 1300 GAAAC-CGA-GUGA-UCUAUCCAUGGC|CAGGUUGAAGGUGCCG(UAAC) N.meningit 1350 AG-GUACUGGAGGACCGAACC-CACGCAU(-GUUGCAAA)AUGCG|GGG- N.meningit 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUCGGAGAUAGC N.meningit 1450 UGGUUCUCCCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGAgcaag--A| N.meningit 1500 -CAC|UGAUGG|GGGUAA|AGC-ACUGU-UAUGGCUA-GG|-GGGUU(au N.meningit 1550 ugc)AACUUACCAACCCAUG-GCAAACUCAGAA-UA-|CCA-U-C-A--A N.meningit 1600 GUGG---UU|CCU-CGGGAGACAGAC--AGC-GGGU(GCUAAC)GUCCGU N.meningit 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCC- N.meningit 1700 AAUGA-UAGA-U-UAA-GUG------GUAAACGAAGUG-GGAAGGCCCA- N.meningit 1750 GACAGCCAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA N.meningit 1800 AGC(GUAAUA)GC|UCACUGGU-----CGAGU-CGU-CC--UGC|GCGGA N.meningit 1850 AGAU-GUAA-CGGGGCUCAAAUCUA-U|A|ACCGAAGCU|GCGG|augcc N.meningit 1900 ag-----(uuua-------------------------------------- N.meningit 1950 -------------------------------------------------- N.meningit 2000 -------------------------------------------------- N.meningit 2050 -------------------------------------------------- N.meningit 2100 -------------------------------------------------- N.meningit 2150 -----------------------------------)------cuggcau- N.meningit 2200 GG-UAGGGGAG|-----CGUU-CUG-UAG--------------------- N.meningit 2250 -------------------------------------------------- N.meningit 2300 --------------------------------G-CCGA-UGAAGGUG-C- N.meningit 2350 A-UU(-GUAA-)AGU--GUGCUGG|AGGUAU-CAGAAGUGCGAAUGU-UG N.meningit 2400 AC|AUG-AGUA--GCGAUAAAGCGGG(UGAAAAG)CCCGCU|CGCC-GAA N.meningit 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| N.meningit 2500 CGG|C-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGUCGAUGG-GAAAC N.meningit 2550 AGG-(UU-AAUAUU)C-CUGU|AC|uu-g-au-uca-aau---------- N.meningit 2600 -------------------------------------------------- N.meningit 2650 -------------------------------------------------- N.meningit 2700 ------gcgau------gugg--gga-cggagaagguua-gguu-g-|gc N.meningit 2750 a-agc(ug--uuggaa-ua---)gc-uugu-|uuaa-------------- N.meningit 2800 ---gccg-guaggu-------ggaaga-cuuagg(ca-aa-u-)cc|g-- N.meningit 2850 ggucuucuu---------aacacc-gagaagug-auga|cga-|------ N.meningit 2900 ------guguc(-uacg--)gacau-----------gaag--uaacc-ga N.meningit 2950 uacc-acg-|cuuccaggaaa-agccac-uaagcuuca--------gu-u N.meningit 3000 -ugaau--uga|A|CCGUACCCCAAACC(GACACA)GG|UGG-GCAGGA- N.meningit 3050 U-(GAGAA)UUCUAAGGCGC||UUGAGAGAACUCAGGAG----------- N.meningit 3100 ----AAGGAACUCGGCAAAUUGAUACCGUAAC(-UUCG)GGAGAAGGUAU N.meningit 3150 |GCCCUcuaa-gguuaa-----------gga(-cuugc)ucc-------- N.meningit 3200 -guaagccc-uggaggg-U|C(GCA)GAGAAUAGGUG-GCUG|CGACU-- N.meningit 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CUAACAC(GAAA------)G N.meningit 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCUG-GAA-GGUUAAUU N.meningit 3350 GAAGAU----GU--------(G-AGA)-----------GC------AUCG N.meningit 3400 GAUCGAAGCC|CCAGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( N.meningit 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA N.meningit 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCUGAGACUCA|GCGAAGUU N.meningit 3550 |GAAGUGG-UUG(UGAAGAUG)CAAUCUACCCGCUGC-UAGACGGAAAGA N.meningit 3600 CCCCGUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAAGUCACU N.meningit 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAG--CAGAGAC(GCCA)GUCUCUG N.meningit 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UGUCUUUGAGG-UUCUAA N.meningit 3750 -CCCAGA----CCCG(--UC-AUC)-CGGGUCGGG-GACCGUGCAUGGUA N.meningit 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGCGUAAC)GGAGG N.meningit 3850 A|G|U|UCGAAGGUUACC|UAGGUCCGG(UCGGAAA)UCGGACUGA-UA| N.meningit 3900 GU(G|CAAUG)GCAAAAGGUAGCUUAACUGCGAGAC(CGACAA)GUCGAG N.meningit 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) N.meningit 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC N.meningit 4050 UGA--UUCCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GAGU-UUGGCAC N.meningit 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GUAGU---C)-GGU N.meningit 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGUGGUACG-UGAGCUGG N.meningit 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCAGUG N.meningit 4250 G--|CG-UUGGAAGUUU|GA-|CGGGG-C-UGC--------------UCC N.meningit 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGAACCUCUGGUGUACCGGU|U N.meningit 4350 GUAAC(GC-CA-)GUUGCA-UAGCCGGGUAGCU-AAGUUCGGAAGAGAUA N.meningit 4400 AGCGCU(GAAAGCAUCUA)AGCGCGAAACUCGCCUG|AAGAUGAGACUUC N.meningit 4450 C|CU|UGCGGU(-UUA--)ACCGCA-CUA-AAGA|-GU|CGUUC-(GAGA N.meningit 4500 CC-A)GGACG-UUGAUAG|GUGGG|GUGUG-GAAGCGCG--(GUAA-)-- N.meningit 4550 CGCGU|GA-AGCUA|A|CCCAUACUAAUU-GCUCGUGAG|GCUUGA-CUC N.meningit 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ N.meningit 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ N.meningit 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ N.meningit 4750 ~~~|||||| N.gonorrho 0 -------------------------------------------------- N.gonorrho 50 ----------------------------|---------GGUCAAGUGAA- N.gonorrho 100 --UAAGUGCAUCAGGCGGAUG|CCUUGG|CGAUGAU|AG|GC-GACGAAG N.gonorrho 150 GA|CGUG(UAAG-CC-)U|-GCG-AAAAGCGCGGGG|-GAGCU(G-GCAA N.gonorrho 200 UAA-)AGCUAUG-AUU-CCGCGAUG|UCCGAAUGGG(GAAA)CCC|acug N.gonorrho 250 ca--(--------------------------------------------- N.gonorrho 300 -------------------------------------------------- N.gonorrho 350 -------------------------------------------------- N.gonorrho 400 -------------------------------------------------- N.gonorrho 450 ---uucug)--ugcagu-AUCC-UAAGUU(GA-AUACA--UA)GGC-UUA N.gonorrho 500 -GAG--AAG-C-GAAC|CC-GGAGAACU|GA(ACCA)UCUAAGUA-CCCG N.gonorrho 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GCAAGUAGU(GGCGA)G N.gonorrho 600 CGA-ACG-CGGA-GGA-GCCU------------------------(---- N.gonorrho 650 -)------------------------------------------------ N.gonorrho 700 --------------------------guacgu-aauaacugucgagau-a N.gonorrho 750 gaaGAAc-aag-c(u-gggaa)g-cuugAC|c(aua)gcGGG(UGACAGU N.gonorrho 800 )CCCGU-Auuc-gaaaucucaac-agcgguacuaagcguac--------- N.gonorrho 850 ---------------GAAAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC N.gonorrho 900 UGAAUAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCAUC N.gonorrho 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G N.gonorrho 1000 AACCCC(GG-GA-)GGGAA--GUGAAA-CAGAACCUGAAACCUG-AUGCA N.gonorrho 1050 UACAA-A-CAGUGGGAGCGC--C---------------(----cuagu-) N.gonorrho 1100 ---------------G-GUGUGACUGCGUACCU(UUU-GUAU|A)AUGG| N.gonorrho 1150 -GUCAACGACUUAC-AUUC-AGUAGC-GAGCUUAACC--(-GGAUA)--G N.gonorrho 1200 G-GGAGGCGUAGG(GAAA-)CCGAGUCU(UAA-UA)GGGCGA-------- N.gonorrho 1250 --------------------------u-gaG-UUGCUGGGUGUA-GACCC N.gonorrho 1300 GAAAC-CGA-GUGA-UCUAUCCAUGGU|CAGGUUGAAGGUGCCG(UAAC) N.gonorrho 1350 AG-GUACUGGAGGACCGAACC-CACGCAU(-GUUGCAAA)AUGCG|GGG- N.gonorrho 1400 AUGAG-CUGUGGGUAGGGGU(-GAAAG)GCUAAACAAACUCGGAGAUAGC N.gonorrho 1450 UGGUUCUCCCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGAgcaag--A| N.gonorrho 1500 -CAC|UGAUGG|GGGUAA|AGC-ACUGU-UAUGGCUA-GG|-GGGUU(au N.gonorrho 1550 ugc)AACUUACCAACCCAUG-GCAAACUCAGAA-UA-|CCA-U-C-A--A N.gonorrho 1600 GUGG---UU|CCU-CGGGAGACAGAC--AGC-GGGU(GCUAAC)GUCCGU N.gonorrho 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCGGCUAAG-GU|CCCA- N.gonorrho 1700 AAUGA-UAGA-U-UAA-GUG------GUAAACGAAGUG-GGAAGGCACA- N.gonorrho 1750 GACAGCCAGGAUGUUGGC(UUAGAAGCA)GCCAU-CAU|U(UAA)A|GAA N.gonorrho 1800 AGC(GUAAUA)GC|UCACUGGU-----CGAGU-CGU-CC--UGC|GCGGA N.gonorrho 1850 AGAU-GUAA-CGGGGCUCAAAUCUA-U|A|ACCGAAGCU|GCGG|augcc N.gonorrho 1900 gg-----(uuua-------------------------------------- N.gonorrho 1950 -------------------------------------------------- N.gonorrho 2000 -------------------------------------------------- N.gonorrho 2050 -------------------------------------------------- N.gonorrho 2100 -------------------------------------------------- N.gonorrho 2150 -----------------------------------)------ccggcau- N.gonorrho 2200 GG-UAGGGGAG|-----CGUU-CUG-UAG--------------------- N.gonorrho 2250 -------------------------------------------------- N.gonorrho 2300 --------------------------------G-CUGA-UGAAGGUG-C- N.gonorrho 2350 A-UU(-GUAA-)AGU--GUGCUGG|AGGUAU-CAGAAGUGCGAAUGU-UG N.gonorrho 2400 AC|AUG-AGUA--GCGAUAAAGCGGG(UGAAAAG)CCCGCU|CGCC-GAA N.gonorrho 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUAAGU| N.gonorrho 2500 CGG|c-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGUCGAUGG-GAAAC N.gonorrho 2550 AGG-(UU-AAUAUU)C-CUGU|AC|uu-g-au-uca-aau---------- N.gonorrho 2600 -------------------------------------------------- N.gonorrho 2650 -------------------------------------------------- N.gonorrho 2700 ------gcgau------gugg--gga-cggagaagguua-gguu-g-|gc N.gonorrho 2750 a-agc(ug--uuggaa-ua---)gc-uugu-|uuaa-------------- N.gonorrho 2800 ---gccg-guaggu-------ggaaga-cuuagg(ca-aa-u-)cc|g-- N.gonorrho 2850 gguuuucuu---------aacacc-gagaagug-auga|cga-|------ N.gonorrho 2900 ------guguc(-uacg--)gacac-----------gaag--caacc-ga N.gonorrho 2950 uacc-acg-|cuuccaggaaa-agccac-uaagcuuca--------gu-u N.gonorrho 3000 -ugaau--cga|A|CCGUACCCCAAACC(GACACA)GG|UGG-GUAGGA- N.gonorrho 3050 U-(GAGAA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- N.gonorrho 3100 ----AAGGAACUCGGCAAAUUGAUACCGUAAC(-UUCG)GGAGAAGGUAU N.gonorrho 3150 |GCCCUCuaa-gguuaa-----------gga(-cuugc)ucc-------- N.gonorrho 3200 -guaagccc-cggaggg-U|C(GCA)GAGAAUAGGUG-GCUG|CGACU-- N.gonorrho 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CCAACAC(GAAA------)G N.gonorrho 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAUU N.gonorrho 3350 GAAGAU----GU--------(G-CAA)-----------GC------AUCG N.gonorrho 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( N.gonorrho 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CCGCACGA N.gonorrho 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU N.gonorrho 3550 |GAAGUGG-UUG(UGAAGAUG)CAAUCUACCCGCUGC-UAGACGGAAAGA N.gonorrho 3600 CCCCGUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAAGUCACU N.gonorrho 3650 UGUGUAGGAUAGGUGGGAGGCUUGGAAG--CAGAGAC(GCCA)GUCUCUG N.gonorrho 3700 UGGAGUCGUC-C-UUGAAAUACCACC|CUGG-UGUCUUUGAGG-UUCUAA N.gonorrho 3750 -CCCAGA----CCCG(--UC-AUC)-CGGGUCGGG-GACCGUGCAUGGUA N.gonorrho 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGCGUAAC)GGAGG N.gonorrho 3850 A|G|U|UCGAAGGUUACC|UAGGUCCGG(UCGGAAA)UCGGACUGA-UA| N.gonorrho 3900 GU(G|CAAUG)GCAAAAGGUAGCUUAACUGCGAGAC(CGACAA)GUCGGG N.gonorrho 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) N.gonorrho 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|CGGG|GAUAACAG|GC N.gonorrho 4050 UGA--UUCCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GAGU-UUGGCAC N.gonorrho 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GUAGU---C)-GGU N.gonorrho 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGUGGUACG-UGAGCUGG N.gonorrho 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCAGUG N.gonorrho 4250 G--|CG-UUGGAAGUUU|GA-|CGGGG-C-UGC--------------UCC N.gonorrho 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGAACCUCUGGUGUACCGGU|U N.gonorrho 4350 GUAAC(GC-CA-)GUUGCA-UAGCCGGGUAGCU-AAGUUCGGAAGAGAUA N.gonorrho 4400 AGCGCU(GAAAGCAUCUA)AGCGCGAAACUCGCCUG|AAGAUGAGACUUC N.gonorrho 4450 C|CU|UGCGGU(-UUA--)ACCGCA-CUA-AAGG|-GU|CGUUC-(GAGA N.gonorrho 4500 CC-A)GGACG-UUGAUAG|GUGGG|GUGUG-GAAGCGCG--(GUAA-)-- N.gonorrho 4550 CGCGU|GA-AGCUA|A|CCCAUACUAAUU-GCCCGUGAG|GCUUGA-CUC N.gonorrho 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ N.gonorrho 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ N.gonorrho 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ N.gonorrho 4750 ~~~|||||| R.picketti 0 -------------------------------------------------- R.picketti 50 ----------------------------|---------GGUCAAGCGAA- R.picketti 100 --UAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG R.picketti 150 GA|CGUA(GUAG-CC-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA R.picketti 200 ACA-)AGCUUUG-AUC-CGCAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc R.picketti 250 c---(--------------------------------------------- R.picketti 300 -------------------------------------------------- R.picketti 350 -------------------------------------------------- R.picketti 400 -------------------------------------------------- R.picketti 450 ----guau)---ggguc-AUCU-GUUACU(GA-AUACA--UA)GGU-AAC R.picketti 500 -A-G--AAG-C-GAAC|GC-AGUGAACU|GA(AACA)UCUAAGUA-GCUG R.picketti 550 CAGGAACAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G R.picketti 600 CGA-AAU-GGGa-ucA-GCCU------------------------(---- R.picketti 650 -)------------------------------------------------ R.picketti 700 --------------------------uguacucuuuagcaguauuguu-a R.picketti 750 gcaGAAc-gga-a(u-ggaaa)g-uccggc|c(aua)guGGG(UGAUAGC R.picketti 800 )CCCgu-augc-gaaaacaguau-uguggaacuagguguac--------- R.picketti 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.picketti 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG R.picketti 950 AUCGACC-GAUAGU-GAAccAGUACC(GUGA)-GGGA-AAGGCGAAAA-G R.picketti 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA R.picketti 1050 UACAA-A-CAGUCGGAGCCU--G---------------(----gaaa--) R.picketti 1100 ---------------C-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.picketti 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAUUA)--G R.picketti 1200 G-GAAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGU-------- R.picketti 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC R.picketti 1300 GAAAC-CAA-GUGA-UCUAUCCAUGGC|CAGGUUGAAGGUGCGG(UAAC) R.picketti 1350 AC-GUACUGGAGGACCGAANC-CACUAAC(-GUUGAAAA)GUUAG|GGG- R.picketti 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUUGGAAAUAGC R.picketti 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUC----U| R.picketti 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGUcaUGGUUGG-GG|-GGUCU(AU R.picketti 1550 UGC)UGAUUACC-CCGCCAUaGCAAACUCCGAA-UA-|CCG-A-A-G--A R.picketti 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG R.picketti 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- R.picketti 1700 AAA-U-AUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- R.picketti 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA R.picketti 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA R.picketti 1850 AGAU-GUAA-CGGGGCU-AAGCCAU-A|U|ACCGAAGCU|GCGG|augca R.picketti 1900 c------(guaa-------------------------------------- R.picketti 1950 -------------------------------------------------- R.picketti 2000 -------------------------------------------------- R.picketti 2050 -------------------------------------------------- R.picketti 2100 -------------------------------------------------- R.picketti 2150 -----------------------------------)-------gugcau- R.picketti 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- R.picketti 2250 -------------------------------------------------- R.picketti 2300 --------------------------------G-CCUG-UGAAGGUG-U- R.picketti 2350 C-UU(-GUAA-)AGG--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG R.picketti 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA R.picketti 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| R.picketti 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC R.picketti 2550 AGG-(UU-AAUAUU)C-CUGC|AC|cg-u-cg-uau-gau---------- R.picketti 2600 -------------------------------------------------- R.picketti 2650 -------------------------------------------------- R.picketti 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc R.picketti 2750 c-ggg(ug--uuggau-gu---)cc-cggu-|cccu-------------- R.picketti 2800 ---gcau-uggaga--------uggca-cuuagg(ca-aa-u-)cc|g-- R.picketti 2850 ggugcguga-----------uuca-agggugug--ggg|cga-|------ R.picketti 2900 ------gcgac(-uuuag-)gucgc-----------gaag--caauu--g R.picketti 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c R.picketti 3000 -auacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- R.picketti 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- R.picketti 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC R.picketti 3150 |GCCCUUgua-guuuga---------cuggc(-ucgc-)gccag------ R.picketti 3200 ---gaggau-gaagggg-U|U(GCA)AUAAAAUGGUG-GCUG|CGACU-- R.picketti 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G R.picketti 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU R.picketti 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU R.picketti 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.picketti 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.picketti 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU R.picketti 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAANGA R.picketti 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC R.picketti 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGAC(GCUA)GUUUCGG R.picketti 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA R.picketti 3750 -CCUUGG----CCCG(--ugaauc)-CGGGUCGGG-GACAGUGCAUGGUA R.picketti 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGUGUAAC)GGAGG R.picketti 3850 A|G|U|UCGAAGGUACGC|UUGGUACGG(UCGGACA)UCGUACCUA-AA| R.picketti 3900 GU(G|CAAUG)GCAAAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG R.picketti 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) R.picketti 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.picketti 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC R.picketti 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU R.picketti 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.picketti 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG R.picketti 4250 G-G|CG-UUGGAAUCUU|GA-|CGGGGGC-UGC--------------UCC R.picketti 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCGCUGGUGUACCUGU|U R.picketti 4350 GUCUC(GC-CA-)GAG-CA-UCGCAGGGUAGCU-AUGUACGGAAGAGAUA R.picketti 4400 ACCGCU(GAAA-CAUCUA)AGCGGGAAACUUGCCUG|AAGAUGAGGAUUC R.picketti 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUG-AAGG|-GU|CGUUC-(GAGA R.picketti 4500 CC-A)GGACG-UUGAUAG|GCU-G|G~~~~~~~~~~~~~~~(~~~~~)~~ R.picketti 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ R.picketti 4600 ~~~~~~~~|----------------------------------------- R.picketti 4650 -------------------------------------------------- R.picketti 4700 -------------------------------------------------- R.picketti 4750 ---|||||| R.solana.1 0 -------------------------------------------------- R.solana.1 50 ----------------------------|---------GGUCAAGCGAA- R.solana.1 100 --UAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG R.solana.1 150 GA|CGUA(GUAG-CU-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA R.solana.1 200 ACG-)AGCUUUG-AUC-CGCAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc R.solana.1 250 c---(--------------------------------------------- R.solana.1 300 -------------------------------------------------- R.solana.1 350 -------------------------------------------------- R.solana.1 400 -------------------------------------------------- R.solana.1 450 ----guau)---ggguc-AUCC-CUUGCU(GA-AUACA--UA)GGC-AAG R.solana.1 500 -G-G--AGG-C-GAAC|GC-AGUGAACU|GA(AACA)UCUAAGUA-GCUG R.solana.1 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G R.solana.1 600 CGA-AAU-GGGA-ACA-GCCU------------------------(---- R.solana.1 650 -)------------------------------------------------ R.solana.1 700 --------------------------uguacucuuuagcaguauuguu-a R.solana.1 750 gcgGAAc-gga-a(u-ggaaa)g-uccggc|c(aua)guGGG(UGAUAGC R.solana.1 800 )CCCGU-ACGC-gaaaacaguau-uguggaacuagguguac--------- R.solana.1 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.solana.1 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG R.solana.1 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G R.solana.1 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA R.solana.1 1050 UACAA-A-CAGUCGGAGCCU--G---------------(----gaaa--) R.solana.1 1100 ---------------C-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.solana.1 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAUUA)--G R.solana.1 1200 G-GAAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGU-------- R.solana.1 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC R.solana.1 1300 GAAAC-CAA-GUGA-UCUAUCCAUGGC|CAGGUUGAAGGUGCGG(UAAC) R.solana.1 1350 AC-GUACUGGAGGACCGAACN-CACUAAC(-GUUGAAAA)GUUAG|GGG- R.solana.1 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUUGGAAAUAGC R.solana.1 1450 UGGUNCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUC----U| R.solana.1 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGUcaUGGUUGG-GG|-GGUCU(AU R.solana.1 1550 UGC)UGAUUACC-CCGCCAUaGCAAACUCCGAA-UA-|CCG-A-A-G--A R.solana.1 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG R.solana.1 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- R.solana.1 1700 AAG-A-UUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- R.solana.1 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA R.solana.1 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA R.solana.1 1850 AGAU-GUAA-CGGGGCU-AAGCCAG-U|C|ACCGAAGCU|GCGG|augca R.solana.1 1900 c------(guaa-------------------------------------- R.solana.1 1950 -------------------------------------------------- R.solana.1 2000 -------------------------------------------------- R.solana.1 2050 -------------------------------------------------- R.solana.1 2100 -------------------------------------------------- R.solana.1 2150 -----------------------------------)-------gugcau- R.solana.1 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- R.solana.1 2250 -------------------------------------------------- R.solana.1 2300 --------------------------------G-CCUG-UGAAGGUG-U- R.solana.1 2350 C-UU(-GUAA-)AGG--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG R.solana.1 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA R.solana.1 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| R.solana.1 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC R.solana.1 2550 AGG-(UU-AAUAUU)C-CUGC|AC|cg-u-cg-uau-gau---------- R.solana.1 2600 -------------------------------------------------- R.solana.1 2650 -------------------------------------------------- R.solana.1 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc R.solana.1 2750 c-ggg(ug--uuggaa-gu---)cc-cggu-|cccu-------------- R.solana.1 2800 ---acau-uggaga--------uggca-cuuagg(ca-aa-u-)cc|g-- R.solana.1 2850 ggugcguga-----------uuca-agggugug--ggg|cga-|------ R.solana.1 2900 ------gcgac(-guuag-)gucgc-----------gaag--caauu--g R.solana.1 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c R.solana.1 3000 -auacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- R.solana.1 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- R.solana.1 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC R.solana.1 3150 |GCCCUugua-guuuga---------cuggc(-ucgc-)gccag------ R.solana.1 3200 ---aaggau-gaagggg-U|U(GCA)AUAAAAUGGUG-GCUG|CGACU-- R.solana.1 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G R.solana.1 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU R.solana.1 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU R.solana.1 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.solana.1 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.solana.1 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU R.solana.1 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAANGA R.solana.1 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC R.solana.1 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGAC(GCUA)GUUUCGG R.solana.1 3700 UGGAGCCGAC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA R.solana.1 3750 -CCUUGG----CCCG(--UGaAUC)-CGGGUCGGG-GACAGUGCAUGGUA R.solana.1 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGUGUAAC)GGAGG R.solana.1 3850 A|G|U|UCGAAGGUACGC|UUGGUACGG(UCGGACA)UCGUACCUA-AA| R.solana.1 3900 GU(G|CAAUG)GCAAAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG R.solana.1 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) R.solana.1 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.solana.1 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC R.solana.1 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU R.solana.1 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.solana.1 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG R.solana.1 4250 G-G|CG-UUGGAAUCUU|GA-|CGGGGGC-UGC--------------UCC R.solana.1 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCGCUGGUGUACCUGU|U R.solana.1 4350 GUCUC(GC-CA-)GAG-CA-UCGCAGGGUAUCU-AUGUACGGAAGAGAUA R.solana.1 4400 ACCGCU(GAAA-CAUCUA)AGCGGGAAACUCGCCUG|AAGAUGAGGAUUC R.solana.1 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUG-AAGG|-GU|CGUUC-(GAGA R.solana.1 4500 CC-A)GGACG-UUGAUAU|GCU-G|G~~~~~~~~~~~~~~~(~~~~~)~~ R.solana.1 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ R.solana.1 4600 ~~~~~~~~|----------------------------------------- R.solana.1 4650 -------------------------------------------------- R.solana.1 4700 -------------------------------------------------- R.solana.1 4750 ---|||||| R.solana.2 0 -------------------------------------------------- R.solana.2 50 ----------------------------|---------GGUCAAGCGAA- R.solana.2 100 --UAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG R.solana.2 150 GA|CGUA(GUAG-CU-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA R.solana.2 200 ACG-)AGCUUUG-AUC-CGCAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc R.solana.2 250 c---(--------------------------------------------- R.solana.2 300 -------------------------------------------------- R.solana.2 350 -------------------------------------------------- R.solana.2 400 -------------------------------------------------- R.solana.2 450 ----gaau)---ggguc-AUCU-GUUACU(GA-AUUCA--UA)GGU-AAC R.solana.2 500 -A-G--AGG-C-GAAC|GC-AGUGAACU|GA(AACA)UCUAAGUA-GCUG R.solana.2 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G R.solana.2 600 CGA-AAU-GGGA-UCA-GCCU------------------------(---- R.solana.2 650 -)------------------------------------------------ R.solana.2 700 --------------------------uguacucuuuagcaguauuguu-a R.solana.2 750 gcaAAAc-gga-a(u-ggaaa)g-uccggc|c(aua)guGGG(UGAUAGC R.solana.2 800 )CCCGU-AUGC-gaaaacaguau-uguggaacuagguguac--------- R.solana.2 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.solana.2 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG R.solana.2 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G R.solana.2 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA R.solana.2 1050 UACAA-A-CAGUCGGAGCCU--G---------------(----gaaa--) R.solana.2 1100 ---------------C-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.solana.2 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAUUA)--G R.solana.2 1200 G-GAAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGU-------- R.solana.2 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC R.solana.2 1300 GAAAC-CAA-GUGA-UCUAUCCAUGGC|CAGGUUGAAGGUGCGG(UAAC) R.solana.2 1350 AC-GUACUGGAGGACCGAACN-CACUAAC(-GUUGAAAA)GUUAG|GGG- R.solana.2 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUUGGAAAUAGC R.solana.2 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUC----U| R.solana.2 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGUcaUGGUUGG-GG|-GGUCU(AU R.solana.2 1550 UGC)UGAUUACC-CCGCCAUaGCAAACUCCGAA-UA-|CCG-A-A-G--A R.solana.2 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG R.solana.2 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- R.solana.2 1700 AAG-A-UUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- R.solana.2 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA R.solana.2 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA R.solana.2 1850 AGAU-GUAA-CGGGGCU-AAGCCAG-U|C|ACCGAAGCU|GCGG|augca R.solana.2 1900 c------(guaa-------------------------------------- R.solana.2 1950 -------------------------------------------------- R.solana.2 2000 -------------------------------------------------- R.solana.2 2050 -------------------------------------------------- R.solana.2 2100 -------------------------------------------------- R.solana.2 2150 -----------------------------------)-------gugcau- R.solana.2 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- R.solana.2 2250 -------------------------------------------------- R.solana.2 2300 --------------------------------G-CCUG-UGAAGGUG-U- R.solana.2 2350 C-UU(-GUGA-)AGG--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG R.solana.2 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA R.solana.2 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| R.solana.2 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC R.solana.2 2550 AGG-(UU-AAUAUU)C-CUGC|AC|cg-u-cg-uau-gau---------- R.solana.2 2600 -------------------------------------------------- R.solana.2 2650 -------------------------------------------------- R.solana.2 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc R.solana.2 2750 c-ggg(ug--uuggau-gu---)cc-cggu-|cccu-------------- R.solana.2 2800 ---acau-uggaga--------uggca-cuuagg(ca-aa-u-)cc|g-- R.solana.2 2850 ggugcguga-----------uuca-agggugug--ggg|cga-|------ R.solana.2 2900 ------gcgac(-uuuag-)gucgc-----------gaag--caauu--g R.solana.2 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c R.solana.2 3000 -auacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- R.solana.2 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- R.solana.2 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC R.solana.2 3150 |GCCCUugua-guuuga---------cuggc(-ucgc-)gccag------ R.solana.2 3200 ---aaggac-gaagggg-U|U(GCA)AUAAAAUgGUG-GCUG|CGACU-- R.solana.2 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G R.solana.2 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU R.solana.2 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU R.solana.2 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.solana.2 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.solana.2 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU R.solana.2 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAANGA R.solana.2 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC R.solana.2 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGAC(GCUA)GUUUCGG R.solana.2 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA R.solana.2 3750 -CCUUGG----CCCG(--UGaAUC)-CGGGUCGGG-GACAGUGCAUGGUA R.solana.2 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGUGUAAC)GGAGG R.solana.2 3850 A|G|U|UCGAAGGUACGC|UUGGUACGG(UCGGACA)UCGUACCUA-AA| R.solana.2 3900 GU(G|CAAUG)GCAAAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG R.solana.2 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) R.solana.2 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.solana.2 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC R.solana.2 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU R.solana.2 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.solana.2 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG R.solana.2 4250 G-G|CG-UUGGAAUCUU|GA-|CGGGGGC-UGC--------------UCC R.solana.2 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCGCUGGUGUACCUGU|U R.solana.2 4350 GUCUC(GC-CA-)GAG-CA-UCGCAGGGUAGCU-AUGUACGGAAGAGAUA R.solana.2 4400 ACCGCU(GAAA-CAUCUA)AGCGGGAAACUCGCCUG|AAGAUGAGGAUUC R.solana.2 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUG-AAGG|-GU|CGUUC-(GAGA R.solana.2 4500 CC-A)GGACG-UUGAUAG|GCU-G|G~~~~~~~~~~~~~~~(~~~~~)~~ R.solana.2 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ R.solana.2 4600 ~~~~~~~~|----------------------------------------- R.solana.2 4650 -------------------------------------------------- R.solana.2 4700 -------------------------------------------------- R.solana.2 4750 ---|||||| R.solana.3 0 -------------------------------------------------- R.solana.3 50 ----------------------------|---------GGUCAAGCGAA- R.solana.3 100 --UAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG R.solana.3 150 GA|CGUA(GUAG-CU-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA R.solana.3 200 ACG-)AGCUUUG-AUC-CGCAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc R.solana.3 250 c---(--------------------------------------------- R.solana.3 300 -------------------------------------------------- R.solana.3 350 -------------------------------------------------- R.solana.3 400 -------------------------------------------------- R.solana.3 450 ----guau)---ggguc-AUCU-GUUACU(GA-AUUCA--UA)GGU-AAC R.solana.3 500 -A-G--AGG-C-GAAC|GC-AGUGAACU|GA(AACA)UCUAAGUA-GCUG R.solana.3 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G R.solana.3 600 CGA-AAU-GGGA-ACA-GCCU------------------------(---- R.solana.3 650 -)------------------------------------------------ R.solana.3 700 --------------------------uguacucuuuagcaguauuguu-a R.solana.3 750 gcaAAGc-gga-a(u-ggaaa)g-uccggc|c(aua)guGGG(UGAUAGC R.solana.3 800 )CCCGU-AUGC-gaaaacaguau-uguggaacuagguguac--------- R.solana.3 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.solana.3 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG R.solana.3 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G R.solana.3 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA R.solana.3 1050 UACAA-A-CAGUCGGAGCCU--G---------------(----gaaa--) R.solana.3 1100 ---------------C-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.solana.3 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAUUA)--G R.solana.3 1200 G-GAAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGU-------- R.solana.3 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC R.solana.3 1300 GAAAC-CAA-GUGA-UCUAUCCAUGGC|CAGGUUGAAGGUGCGG(UAAC) R.solana.3 1350 AC-GUACUGGAGGACCGAACN-CACUAAC(-GUUGAAAA)GUUAG|GGG- R.solana.3 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUUGGAAAUAGC R.solana.3 1450 UGGUNCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUC----U| R.solana.3 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGUcaUGGUUGG-GG|-GGUCU(AU R.solana.3 1550 UGC)UGAUUACC-CCGCCAUaGCAAACUCCGAA-UA-|CCG-A-A-G--A R.solana.3 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG R.solana.3 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- R.solana.3 1700 AAG-A-UUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- R.solana.3 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA R.solana.3 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA R.solana.3 1850 AGAU-GUAA-CGGGGCU-AAGCCAG-U|C|ACCGAAGCU|GCGG|augca R.solana.3 1900 c------(guaa-------------------------------------- R.solana.3 1950 -------------------------------------------------- R.solana.3 2000 -------------------------------------------------- R.solana.3 2050 -------------------------------------------------- R.solana.3 2100 -------------------------------------------------- R.solana.3 2150 -----------------------------------)-------gugcau- R.solana.3 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- R.solana.3 2250 -------------------------------------------------- R.solana.3 2300 --------------------------------G-CCUG-UGAAGGUG-U- R.solana.3 2350 C-UU(-GUGA-)AGG--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG R.solana.3 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA R.solana.3 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| R.solana.3 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC R.solana.3 2550 AGG-(UU-AAUAUU)C-CUGC|AC|cg-u-cg-uau-gau---------- R.solana.3 2600 -------------------------------------------------- R.solana.3 2650 -------------------------------------------------- R.solana.3 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc R.solana.3 2750 c-ggg(ug--uuggau-gu---)cc-cggu-|cccu-------------- R.solana.3 2800 ---gcau-uggaga--------uggca-cuuagg(ca-aa-u-)cc|g-- R.solana.3 2850 ggugcguga-----------uuca-agggugug--ggg|cga-|------ R.solana.3 2900 ------gcgac(-uuuag-)gucgc-----------gaag--caauu--g R.solana.3 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c R.solana.3 3000 -auacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- R.solana.3 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- R.solana.3 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC R.solana.3 3150 |GCCCUugua-guuuga---------cuggc(-ucgc-)gccag------ R.solana.3 3200 ---aaggac-gaagggg-U|U(GCA)AUAAAAUGGUG-GCUG|CGACU-- R.solana.3 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G R.solana.3 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU R.solana.3 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU R.solana.3 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.solana.3 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.solana.3 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU R.solana.3 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAANGA R.solana.3 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC R.solana.3 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGAC(GCUA)GUUUCGG R.solana.3 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA R.solana.3 3750 -CCUUGG----CCCG(--UGaAUC)-CGGGUCGGG-GACAGUGCAUGGUA R.solana.3 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGUGUAAC)GGAGG R.solana.3 3850 A|G|U|UCGAAGGUACGC|UUGGUACGG(UCGGACA)UCGUACCUA-AA| R.solana.3 3900 GU(G|CAAUG)GCAAAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG R.solana.3 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) R.solana.3 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.solana.3 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC R.solana.3 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU R.solana.3 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.solana.3 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG R.solana.3 4250 G-G|CG-UUGGAAUCUU|GA-|CGGGGGC-UGC--------------UCC R.solana.3 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCGCUGGUGUACCUGU|U R.solana.3 4350 GUCUC(GC-CA-)GAG-CA-UCGCAGGGUAGCU-AUGUACGGAAGAGAUA R.solana.3 4400 ACCGCU(GAAA-CAUCUA)AGCGGGAAACUCGCCUG|AAGAUGAGGAUUC R.solana.3 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUG-AAGG|-GU|CGUUC-(GAGA R.solana.3 4500 CC-A)GGACG-UUGAUAG|GCU-G|G~~~~~~~~~~~~~~~(~~~~~)~~ R.solana.3 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ R.solana.3 4600 ~~~~~~~~|----------------------------------------- R.solana.3 4650 -------------------------------------------------- R.solana.3 4700 -------------------------------------------------- R.solana.3 4750 ---|||||| R.solana.4 0 -------------------------------------------------- R.solana.4 50 ----------------------------|---------GGUCAAGCGAA- R.solana.4 100 --UAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG R.solana.4 150 GA|CGUA(GUAG-CU-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA R.solana.4 200 ACG-)AGCUUUG-AUC-CGCAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc R.solana.4 250 c---(--------------------------------------------- R.solana.4 300 -------------------------------------------------- R.solana.4 350 -------------------------------------------------- R.solana.4 400 -------------------------------------------------- R.solana.4 450 ----guau)---ggguc-AUCC-CUUGCU(GA-AUACA--UA)GGC-AAG R.solana.4 500 -G-G--AGG-C-GAAC|GC-AGUGAACU|GA(AACA)UCUAAGUA-GCUG R.solana.4 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G R.solana.4 600 CGA-AAU-GGGA-ACA-GCCU------------------------(---- R.solana.4 650 -)------------------------------------------------ R.solana.4 700 --------------------------uguacucuuuagcaguauuguu-a R.solana.4 750 gcgGAAc-gga-a(u-ggaaa)g-uccggc|c(aua)guGGG(UGAUAGC R.solana.4 800 )CCCGU-ACGC-gaaaacaguau-uguggaacuagguguac--------- R.solana.4 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.solana.4 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG R.solana.4 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G R.solana.4 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA R.solana.4 1050 UACAA-A-CAGUCGGAGCCU--G---------------(----gaaa--) R.solana.4 1100 ---------------C-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.solana.4 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAUUA)--G R.solana.4 1200 G-GAAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGU-------- R.solana.4 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC R.solana.4 1300 GAAAC-CAA-GUGA-UCUAUCCAUGGC|CAGGUUGAAGGUGCGG(UAAC) R.solana.4 1350 AC-GUACUGGAGGACCGAACN-CACUAAC(-GUUGAAAA)GUUAG|GGG- R.solana.4 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUUGGAAAUAGC R.solana.4 1450 UGGUNCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUC----U| R.solana.4 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGUcaUGGUUGG-GG|-GGUCU(AU R.solana.4 1550 UGC)UGAUUACC-CCGCCAUaGCAAACUCCGAA-UA-|CCG-A-A-G--A R.solana.4 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG R.solana.4 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- R.solana.4 1700 AAG-A-UUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- R.solana.4 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA R.solana.4 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA R.solana.4 1850 AGAU-GUAA-CGGGGCU-AAGCCAG-U|C|ACCGAAGCU|GCGG|augca R.solana.4 1900 c------(guaa-------------------------------------- R.solana.4 1950 -------------------------------------------------- R.solana.4 2000 -------------------------------------------------- R.solana.4 2050 -------------------------------------------------- R.solana.4 2100 -------------------------------------------------- R.solana.4 2150 -----------------------------------)-------gugcau- R.solana.4 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- R.solana.4 2250 -------------------------------------------------- R.solana.4 2300 --------------------------------G-CCUG-UGAAGGUG-U- R.solana.4 2350 C-UU(-GUAA-)AGG--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG R.solana.4 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA R.solana.4 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| R.solana.4 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC R.solana.4 2550 AGG-(UU-AAUAUU)C-CUGC|AC|cg-u-cg-uau-gau---------- R.solana.4 2600 -------------------------------------------------- R.solana.4 2650 -------------------------------------------------- R.solana.4 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc R.solana.4 2750 c-ggg(ug--uuggaa-gu---)cc-cggu-|cccu-------------- R.solana.4 2800 ---acau-uggaga--------uggca-cuuagg(ca-aa-u-)cc|g-- R.solana.4 2850 ggugcguga-----------uuca-agggugug--ggg|cga-|------ R.solana.4 2900 ------gcgac(-guuag-)gucgc-----------gaag--caauu--g R.solana.4 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c R.solana.4 3000 -auacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- R.solana.4 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- R.solana.4 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC R.solana.4 3150 |GCCCUugua-guuuga---------cuggc(-ucgc-)gccag------ R.solana.4 3200 ---aaggau-gaagggg-U|U(GCA)AUAAAAUGGUG-GCUG|CGACU-- R.solana.4 3250 ---GU(UUAAUAAAA)ACHCAGCACUCUG|CAAACAC(GAAA------)G R.solana.4 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU R.solana.4 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU R.solana.4 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.solana.4 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.solana.4 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU R.solana.4 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAANGA R.solana.4 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC R.solana.4 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGAC(GCUA)GUUUCGG R.solana.4 3700 UGGAGCCGAC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA R.solana.4 3750 -CCUUGG----CCCG(--UGaAUC)-CGGGUCGGG-GACAGUGCAUGGUA R.solana.4 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUUC(CAA-AGUGUAAC)GGAGG R.solana.4 3850 A|G|U|UCGAAGGUACGC|UUGGUACGG(UCGGACA)UCGUACCUA-AA| R.solana.4 3900 GU(G|CAAUG)GCAAAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG R.solana.4 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) R.solana.4 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.solana.4 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC R.solana.4 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU R.solana.4 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.solana.4 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG R.solana.4 4250 G-G|CG-UUGGAAUCUU|GA-|CGGGGGC-UGC--------------UCC R.solana.4 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCGCUGGUGUACCUGU|U R.solana.4 4350 GUCUC(GC-CA-)GAG-CA-UCGCAGGGUAGCU-AUGUACGGAAGAGAUA R.solana.4 4400 ACCGCU(GAAA-CAUCUA)AGCGGGAAACUCGCCUG|AAGAUGAGGAUUC R.solana.4 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUG-AAGG|-GU|CGUUC-(GAGA R.solana.4 4500 CC-A)GGACG-UUGAUAG|GCU-G|G~~~~~~~~~~~~~~~(~~~~~)~~ R.solana.4 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ R.solana.4 4600 ~~~~~~~~|----------------------------------------- R.solana.4 4650 -------------------------------------------------- R.solana.4 4700 -------------------------------------------------- R.solana.4 4750 ---|||||| R.solana.5 0 -------------------------------------------------- R.solana.5 50 ----------------------------|---------GGUCAAGCGAA- R.solana.5 100 --UAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG R.solana.5 150 GA|CGCA(GUAG-CU-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA R.solana.5 200 ACG-)AGCUUUG-AUC-CGCAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc R.solana.5 250 c---(--------------------------------------------- R.solana.5 300 -------------------------------------------------- R.solana.5 350 -------------------------------------------------- R.solana.5 400 -------------------------------------------------- R.solana.5 450 ----gaau)---ggguc-AUCU-GUUACU(GA-AUUCA--UA)GGU-AAC R.solana.5 500 -A-G--AGG-C-GAAC|GC-AGUGAACU|GA(AACA)UCUAAGUA-GCUG R.solana.5 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G R.solana.5 600 CGA-AAU-GGGA-UCA-GCCU------------------------(---- R.solana.5 650 -)------------------------------------------------ R.solana.5 700 --------------------------uguacucuuuagcaguauuguu-a R.solana.5 750 gcaAAAc-gga-a(u-ggaaa)g-uccggc|c(aua)guGGG(UGAUAGC R.solana.5 800 )CCCGU-AUGC-gaaaacaguau-uguggaacuagguguac--------- R.solana.5 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC R.solana.5 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG R.solana.5 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G R.solana.5 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA R.solana.5 1050 UACAA-A-CAGUCGGAGCCU--G---------------(----gaaa--) R.solana.5 1100 ---------------C-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| R.solana.5 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAUUA)--G R.solana.5 1200 G-GAAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGU-------- R.solana.5 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC R.solana.5 1300 GAAAC-CAA-GUGA-UCUAUCCAUGGC|CAGGUUGAAGGUGCGG(UAAC) R.solana.5 1350 AC-GUACUGGAGGACCGAACN-CACUAAC(-GUUGAAAA)GUUAG|GGG- R.solana.5 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUUGGAAAUAGC R.solana.5 1450 UGGUNCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUC----U| R.solana.5 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGUcaUGGUUGG-GG|-GGUCU(AU R.solana.5 1550 UGC)UGAUUACC-CCGCCAUaGCAAACUCCGAA-UA-|CCG-A-A-G--A R.solana.5 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG R.solana.5 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- R.solana.5 1700 AAG-A-UUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- R.solana.5 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA R.solana.5 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA R.solana.5 1850 AGAU-GUAA-CGGGGCU-AAGCCAG-U|C|ACCGAAGCU|GCGG|augca R.solana.5 1900 c------(guaa-------------------------------------- R.solana.5 1950 -------------------------------------------------- R.solana.5 2000 -------------------------------------------------- R.solana.5 2050 -------------------------------------------------- R.solana.5 2100 -------------------------------------------------- R.solana.5 2150 -----------------------------------)-------gugcau- R.solana.5 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- R.solana.5 2250 -------------------------------------------------- R.solana.5 2300 --------------------------------G-CCUG-UGAAGGUG-U- R.solana.5 2350 C-UU(-GUGA-)AGG--AUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG R.solana.5 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA R.solana.5 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| R.solana.5 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC R.solana.5 2550 AGG-(UU-AAUAUU)C-CUGC|AC|cg-u-cg-uau-gau---------- R.solana.5 2600 -------------------------------------------------- R.solana.5 2650 -------------------------------------------------- R.solana.5 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc R.solana.5 2750 c-ggg(ug--uuggau-gu---)cc-cggu-|cccu-------------- R.solana.5 2800 ---acau-uggaga--------uggca-cuuagg(ca-aa-u-)cc|g-- R.solana.5 2850 ggugcguga-----------uuca-agggugug--ggg|cga-|------ R.solana.5 2900 ------gcgac(-uuuag-)gucgc-----------gaag--caauu--g R.solana.5 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c R.solana.5 3000 -auacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- R.solana.5 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- R.solana.5 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC R.solana.5 3150 |GCCCUugua-guuuga---------cuggc(-ucgc-)gccag------ R.solana.5 3200 ---aaggac-gaagggg-U|U(GCA)AUAAAAUGGUG-GCUG|CGACU-- R.solana.5 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G R.solana.5 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU R.solana.5 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU R.solana.5 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( R.solana.5 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA R.solana.5 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU R.solana.5 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAANGA R.solana.5 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC R.solana.5 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAA--CCGGGAC(GCUA)GUUUCGG R.solana.5 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA R.solana.5 3750 -CCUUGG----CCCG(--UGaAUC)-CGGGUCGGG-GACAGUGCAUGGUA R.solana.5 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGUGUAAC)GGAGG R.solana.5 3850 A|G|U|UCGAAGGUACGC|UUGGUACGG(UCGGACA)UCGUACCUA-AA| R.solana.5 3900 GU(G|CAAUG)GCAAAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG R.solana.5 3950 CAGGUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) R.solana.5 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC R.solana.5 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC R.solana.5 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU R.solana.5 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG R.solana.5 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG R.solana.5 4250 G-G|CG-UUGGAAUCUU|GA-|CGGGGGC-UGC--------------UCC R.solana.5 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCGCUGGUGUACCUGU|U R.solana.5 4350 GUCUC(GC-CA-)GAG-CA-UCGCAGGGUAGCU-AUGUACGGAAGAGAUA R.solana.5 4400 ACCGCU(GAAA-CAUCUA)AGCGGGAAACUCGCCUG|AAGAUGAGGAUUC R.solana.5 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUG-AAGG|-GU|CGUUC-(GAGA R.solana.5 4500 CC-A)GGACG-UUGAUAG|GCU-G|G~~~~~~~~~~~~~~~(~~~~~)~~ R.solana.5 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ R.solana.5 4600 ~~~~~~~~|----------------------------------------- R.solana.5 4650 -------------------------------------------------- R.solana.5 4700 -------------------------------------------------- R.solana.5 4750 ---|||||| B.mallei 0 -------------------------------------------------- B.mallei 50 ----------------------------|---------GGUCAAGCGAA- B.mallei 100 --CAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG B.mallei 150 GA|CGCG(GUAG-CC-)U|-GCG-AAAAGCUACGGG|-GAGCU(G-GCAA B.mallei 200 ACG-)AGCUUUG-AUC-CGUAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc B.mallei 250 c---(--------------------------------------------- B.mallei 300 -------------------------------------------------- B.mallei 350 -------------------------------------------------- B.mallei 400 -------------------------------------------------- B.mallei 450 ----uuuu)---ggguc-AUCC-UAGACU(GA-AUACA--UA)GGU-CUA B.mallei 500 -GUG--AGG-C-GAAC|GC-GGUGAACU|GA(AACA)UCUAAGUA-ACCG B.mallei 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G B.mallei 600 CGA-AAU-GGGA-AGA-GCCU------------------------(---- B.mallei 650 -)------------------------------------------------ B.mallei 700 ---------------------------guacucuuuauuuguauuguu-a B.mallei 750 gccGAAc-gcu-c(u-ggaaa)g-ugcggc|c(aua)gcAGG(UGAUAGC B.mallei 800 )CCUGU-AGGC-gaaaacaguau-gaaagaacuagguguac--------- B.mallei 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC B.mallei 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG B.mallei 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G B.mallei 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA B.mallei 1050 UACAA-A-CAGUCGGAGCCU--C---------------(----uucg--) B.mallei 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.mallei 1150 -GUCAGCGACUUAC-GUUC-AGUAGC-AAGCUUAACC--(-GAAUA)--G B.mallei 1200 G-GCAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGu-------- B.mallei 1250 --------------------------u-CAG-UUGCUGGGCGUA-GACCC B.mallei 1300 GAAAC-CAG-GUGA-UCUAUCCAUGGC|CAGGAUGAAGGUGCGG(UAAC) B.mallei 1350 AC-GUACUGGAGGUCCGAACC-CACUAAC(-GUUGAAAA)GUUAG|GGG- B.mallei 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACCUGGAAAUAGC B.mallei 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUc----U| B.mallei 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGU-CAUGGUUG-GG|GGGUCU(AU B.mallei 1550 UGC)AGAUUACCCCGCCAUA-GCAAACUCCGAA-UA-|CCG-A-A-G--A B.mallei 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG B.mallei 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCC- B.mallei 1700 AAA-U-AUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- B.mallei 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA B.mallei 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA B.mallei 1850 AGAU-GUAA-CGGGGCU-AAGCCAU-A|U|ACCGAAGCU|GCGG|augcg B.mallei 1900 ag-----(cuagu------------------------------------- B.mallei 1950 -------------------------------------------------- B.mallei 2000 -------------------------------------------------- B.mallei 2050 -------------------------------------------------- B.mallei 2100 -------------------------------------------------- B.mallei 2150 -----------------------------------)------cucgcau- B.mallei 2200 GG-UAGGAGAG|-----CGUU-CCG-UAA--------------------- B.mallei 2250 -------------------------------------------------- B.mallei 2300 --------------------------------G-CCUG-CGAAGGUG-C- B.mallei 2350 G-UU(-GAAA-)AGC--GUGCUGG|AGGUAU-CGGAAGUGCGAAUGC-UG B.mallei 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA B.mallei 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| B.mallei 2500 CGG|C-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGCUGAUGG-GAAGC B.mallei 2550 AGG-(UC-AAUAUU)C-CUGC|AC|cg-u-cg-uua-gau---------- B.mallei 2600 -------------------------------------------------- B.mallei 2650 -------------------------------------------------- B.mallei 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc B.mallei 2750 c-ggg(ug--uuggaa-gu---)cc-cggu-|cgcu-------------- B.mallei 2800 ---gcauuggagaa---------ggcg-cuuagg(ca-aa-u-)cc|g-- B.mallei 2850 ggcgcagga------------uucaagggugug--gcg|cga-|------ B.mallei 2900 ------gcucc(-uucg--)ggagc-----------gaag--caauu--g B.mallei 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c B.mallei 3000 -uaacg--aug|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- B.mallei 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- B.mallei 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC B.mallei 3150 |GCCCUggua-gcuuga---------cuggc(-cugc-)gccag------ B.mallei 3200 ---aagggu-gaagggg-U|U(GCA)AUAAACUGGUG-GCUG|CGACU-- B.mallei 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G B.mallei 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU B.mallei 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU B.mallei 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.mallei 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.mallei 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU B.mallei 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUACCCGCGGC-UAGACGGAAAGA B.mallei 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC B.mallei 3650 UGUGUAGGAUAGGUGGGAGGCUAUGAAA--CCGGAAU(GCUA)GUUUCGG B.mallei 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA B.mallei 3750 -CCUUGG----CCCG(--ug-auc)-CGGGUCGGG-GACAGUGCAUGGUA B.mallei 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGCGUAAC)GGAGG B.mallei 3850 A|G|U|ACGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| B.mallei 3900 GU(G|CAAUG)GCAUAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG B.mallei 3950 CAGGUGC(GAAA)GC-AGGU|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) B.mallei 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC B.mallei 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC B.mallei 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU B.mallei 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG B.mallei 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG B.mallei 4250 G-G|CG-UUGGAAGUUU|GA-|AGGGGGC-UGC--------------UCC B.mallei 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGAACCUCUGGUGUACCGGU|U B.mallei 4350 GUGAC(GC-CA-)GUCGCA-UCGCCGGGUAGCU-AUGUUCGGAAGAGAUA B.mallei 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACUCGCCUU|AAGAUGAGACUUC B.mallei 4450 C|CC|GGGGA-(cuuga-)-UCCCC-UUG-AAGG|-GU|CGUUC-(GAGA B.mallei 4500 CC-A)GGACG-UUGAUAG|GUCGG|GUGUG-UAAGCGCA--(GUAA-)-- B.mallei 4550 UGCGU|UC-AGCUA|A|CCGAUACUAAUU-GCCCGUACG|GCUUGA-UCC B.mallei 4600 Ua------|----------------------------------------- B.mallei 4650 -------------------------------------------------- B.mallei 4700 -------------------------------------------------- B.mallei 4750 ---|||||| B.pseudoma 0 -------------------------------------------------- B.pseudoma 50 ----------------------------|---------GGUCAAGCGAA- B.pseudoma 100 --CAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG B.pseudoma 150 GA|CGCG(GUAG-CC-)U|-GCG-AAAAGCUACGGG|-GAGCU(G-GCAA B.pseudoma 200 ACG-)AGCUUUG-AUC-CGUAGAUG|UCCGAAUGGG(GAAA)CCC|ggcc B.pseudoma 250 c---(--------------------------------------------- B.pseudoma 300 -------------------------------------------------- B.pseudoma 350 -------------------------------------------------- B.pseudoma 400 -------------------------------------------------- B.pseudoma 450 ----uuuu)---ggguc-AUCC-UAGACU(GA-AUACA--UA)GGU-CUA B.pseudoma 500 -GUG--AGG-C-GAAC|GC-GGUGAACU|GA(AACA)UCUAAGUA-ACCG B.pseudoma 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G B.pseudoma 600 CGA-AAU-GGGA-AGA-GCCU------------------------(---- B.pseudoma 650 -)------------------------------------------------ B.pseudoma 700 ---------------------------guacucuuuauuuguauuguu-a B.pseudoma 750 gccGAAc-gcu-c(u-ggaaa)g-ugcggc|c(aua)gcAGG(UGAUAGC B.pseudoma 800 )CCUGU-AGGC-gaaaacaguau-gaaagaacuagguguac--------- B.pseudoma 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC B.pseudoma 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG B.pseudoma 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G B.pseudoma 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA B.pseudoma 1050 UACAA-A-CAGUCGGAGCCU--C---------------(----uucg--) B.pseudoma 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.pseudoma 1150 -GUCAGCGACUUAC-GUUC-AGUAGC-AAGCUUAACC--(-GAAUA)--G B.pseudoma 1200 G-GCAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGu-------- B.pseudoma 1250 --------------------------u-CAG-UUGCUGGGCGUA-GACCC B.pseudoma 1300 GAAAC-CAG-GUGA-UCUAUCCAUGGC|CAGGAUGAAGGUGCGG(UAAC) B.pseudoma 1350 AC-GUACUGGAGGUCCGAACC-CACUAAC(-GUUGAAAA)GUUAG|GGG- B.pseudoma 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACCUGGAAAUAGC B.pseudoma 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUc----U| B.pseudoma 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGU-CAUGGUUG-GG|GGGUCU(AU B.pseudoma 1550 UGC)AGAUUACCCCGCCAUA-GCAAACUCCGAA-UA-|CCG-A-A-G--A B.pseudoma 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG B.pseudoma 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCC- B.pseudoma 1700 AAA-U-AUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- B.pseudoma 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA B.pseudoma 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA B.pseudoma 1850 AGAU-GUAA-CGGGGCU-AAGCCAU-A|U|ACCGAAGCU|GCGG|augcg B.pseudoma 1900 ag-----(cuagu------------------------------------- B.pseudoma 1950 -------------------------------------------------- B.pseudoma 2000 -------------------------------------------------- B.pseudoma 2050 -------------------------------------------------- B.pseudoma 2100 -------------------------------------------------- B.pseudoma 2150 -----------------------------------)------cucgcau- B.pseudoma 2200 GG-UAGGAGAG|-----CGUU-CCG-UAA--------------------- B.pseudoma 2250 -------------------------------------------------- B.pseudoma 2300 --------------------------------G-CCUG-CGAAGGUG-C- B.pseudoma 2350 G-UU(-GAAA-)AGC--GUGCUGG|AGGUAU-CGGAAGUGCGAAUGC-UG B.pseudoma 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA B.pseudoma 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| B.pseudoma 2500 CGG|C-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGCUGAUGG-GAAGC B.pseudoma 2550 AGG-(UC-AAUAUU)C-CUGC|AC|cg-u-cg-uua-gau---------- B.pseudoma 2600 -------------------------------------------------- B.pseudoma 2650 -------------------------------------------------- B.pseudoma 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc B.pseudoma 2750 c-ggg(ug--uuggaa-gu---)cc-cggu-|cgcu-------------- B.pseudoma 2800 ---gcauuggagaa---------ggcg-cuuagg(ca-aa-u-)cc|g-- B.pseudoma 2850 ggcgcagga------------uucaagggugug--gcg|cga-|------ B.pseudoma 2900 ------gcgcu(-cuag--)ggcgc-----------gaag--caauu--g B.pseudoma 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-c B.pseudoma 3000 -uaacg--aug|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- B.pseudoma 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- B.pseudoma 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC B.pseudoma 3150 |GCCCUggua-gcuuga---------cuggc(-cugc-)gccag------ B.pseudoma 3200 ---aagggu-gaagggg-U|U(GCA)AUAAACUGGUG-GCUG|CGACU-- B.pseudoma 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G B.pseudoma 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU B.pseudoma 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU B.pseudoma 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.pseudoma 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.pseudoma 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU B.pseudoma 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUACCCGCGGC-UAGACGGAAAGA B.pseudoma 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC B.pseudoma 3650 UGUGUAGGAUAGGUGGGAGGCUAUGAAA--CCGGAAC(GCUA)GUUUCGG B.pseudoma 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA B.pseudoma 3750 -CCUUGG----CCCG(--ug-auc)-CGGGUCGGG-GACAGUGCAUGGUA B.pseudoma 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGCGUAAC)GGAGG B.pseudoma 3850 A|G|U|ACGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| B.pseudoma 3900 GU(G|CAAUG)GCAUAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG B.pseudoma 3950 CAGGUGC(GAAA)GC-AGGU|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) B.pseudoma 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC B.pseudoma 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC B.pseudoma 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU B.pseudoma 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG B.pseudoma 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG B.pseudoma 4250 G-G|CG-UUGGAAGUUU|GA-|AGGGGGC-UGC--------------UCC B.pseudoma 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGAACCUCUGGUGUACCGGU|U B.pseudoma 4350 GUGAC(GC-CA-)GUCGCA-UCGCCGGGUAGCU-AUGUUCGGAAGAGAUA B.pseudoma 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACUCGCCUU|AAGAUGAGACUUC B.pseudoma 4450 C|CC|GGGGA-(cuuga-)-UCCCC-UUG-AAGG|-GU|CGUUC-(GAGA B.pseudoma 4500 CC-A)GGACG-UUGAUAG|GUCGG|GUGUG-UAAGCGCA--(GUAA-)-- B.pseudoma 4550 UGCGU|UC-AGCUA|A|CCGAUACUAAUU-GCCCGUACG|GCUUGA-UCC B.pseudoma 4600 Ua------|----------------------------------------- B.pseudoma 4650 -------------------------------------------------- B.pseudoma 4700 -------------------------------------------------- B.pseudoma 4750 ---|||||| B.gladioli 0 -------------------------------------------------- B.gladioli 50 ----------------------------|---------GGUCAAGCGAA- B.gladioli 100 --CAAGUGCAUGUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG B.gladioli 150 GA|CGCG(GUAG-CC-)U|-GCG-AAACGCUACGGG|-GAGCU(G-GCAA B.gladioli 200 ACG-)AGCUUUG-AUC-CGUAGAUG|UCCGAAUGGG(GAAA)CCC|acuc B.gladioli 250 c---(--------------------------------------------- B.gladioli 300 -------------------------------------------------- B.gladioli 350 -------------------------------------------------- B.gladioli 400 -------------------------------------------------- B.gladioli 450 ----uuuu)---ggagu-AUCC-AUAGCU(GA-AUACA--UA)GGC-UAU B.gladioli 500 -GUG--AGG-C-GAAC|GC-GGUGAACU|GA(AACA)UCUAAGUA-ACCG B.gladioli 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CAAAGUAGU(GGCGA)G B.gladioli 600 CGA-AAU-GGGA-AGA-GCCU------------------------(---- B.gladioli 650 -)------------------------------------------------ B.gladioli 700 ---------------------------guacucuuuauuuguauuguu-a B.gladioli 750 gucGAAc-gcu-c(u-ggaaa)g-ugcggc|c(aua)gcAGG(UGAUAGC B.gladioli 800 )CCUGU-AGAC-gaaaacaguau-gaaagaacuagguguac--------- B.gladioli 850 ---------------GACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC B.gladioli 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG B.gladioli 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G B.gladioli 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGC-AUGCA B.gladioli 1050 UACAA-A-CAGUCGGAGCCU--C---------------(----guaa--) B.gladioli 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.gladioli 1150 -GUCAGCGACUUAC-GUUC-AGUAGC-AAGCUUAACC--(-GAAUA)--G B.gladioli 1200 G-GCAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGu-------- B.gladioli 1250 --------------------------u-CAG-UUGCUGGGCGUA-GACCC B.gladioli 1300 GAAAC-CAA-GUGA-UCUAUCCAUGGC|CAGGAUGAAGGUGCGG(UAAC) B.gladioli 1350 AC-GUACUGGAGGUCCGAACC-CACUAAC(-GUUGAAAA)GUUAG|GGG- B.gladioli 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAACUUGGAAAUAGC B.gladioli 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUc----U| B.gladioli 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGU-CAUGGUUG-GG|GGGUCC(AU B.gladioli 1550 UGC)GGAUUACCCCGCCAUA-GCAAACUCCGAA-UA-|CCG-A-A-G--A B.gladioli 1600 GUGC---AA|UCA-CGGGAGACAGAC--AUC-GGGU(GCUAAC)GUCCGG B.gladioli 1650 -UGUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCC- B.gladioli 1700 AAA-U-AUAG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUAA- B.gladioli 1750 AACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA B.gladioli 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA B.gladioli 1850 AGAU-GUAA-CGGGGCU-AAGCUAU-A|U|ACCGAAGCU|GCGG|augca B.gladioli 1900 ua-----(uuua-------------------------------------- B.gladioli 1950 -------------------------------------------------- B.gladioli 2000 -------------------------------------------------- B.gladioli 2050 -------------------------------------------------- B.gladioli 2100 -------------------------------------------------- B.gladioli 2150 -----------------------------------)------uaugcau- B.gladioli 2200 GG-UAGGAGAG|-----CGUU-CCG-UAA--------------------- B.gladioli 2250 -------------------------------------------------- B.gladioli 2300 --------------------------------G-CCUG-CGAAGGUG-C- B.gladioli 2350 A-UU(-GUAA-)AGU--GUGCUGG|AGGUAU-CGGAAGUGCGAAUGC-UG B.gladioli 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAGG)CCCCCU|CGCC-GUA B.gladioli 2450 AGCCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| B.gladioli 2500 CGG|C-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGCUGAUGG-GAAGC B.gladioli 2550 AGG-(UC-AAUAUU)C-CUGC|AC|ca-u-ug-uua-aau---------- B.gladioli 2600 -------------------------------------------------- B.gladioli 2650 -------------------------------------------------- B.gladioli 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguu-g-|uc B.gladioli 2750 c-ggg(ug--uuggaa-gu---)cc-cggu-|cgcu-------------- B.gladioli 2800 ---gcguuggagaa---------ggca-cuuagg(ca-aa-u-)cc|g-- B.gladioli 2850 ggugcagaa------------uucaagggcgug--gcg|cga-|------ B.gladioli 2900 ------gcuuc(-uuag--)gaagc-----------gaag--caauu--g B.gladioli 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gu-u B.gladioli 3000 -uaaca--gug|A|CCGUACCGCAAACC(GACACA)GG|UGG-GCGAGA- B.gladioli 3050 U-(GAGUA)UUCUAAGGCGC||UUGAGAGAACUCGGGAG----------- B.gladioli 3100 ----AAGGAACUCGGCAAAUUGGUACCGUAAC(-UUCG)GGAUAAGGUAC B.gladioli 3150 |GCCCCugua-gcuuga---------cuggc(-cugc-)gccag------ B.gladioli 3200 ---aagggu-gaagggg-U|U(GCA)AUAAACUGGUG-GCUG|CGACU-- B.gladioli 3250 ---GU(UUAAUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G B.gladioli 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GAUUAAAU B.gladioli 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU B.gladioli 3400 GAUUGAAGUC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.gladioli 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.gladioli 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU B.gladioli 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAAAGA B.gladioli 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACCGAUC B.gladioli 3650 UGUGUAGGAUAGGUGGGAGGCUAUGAAA--CCGGAAC(GCUA)GUUUCGG B.gladioli 3700 UGGAGCCGUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGAGG-UUCUAA B.gladioli 3750 -CCUUGG----CCCG(--ug-auc)-CGGGUCGGG-GACAGUGCAUGGUA B.gladioli 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGUGUAAC)GGAGG B.gladioli 3850 A|G|U|ACGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| B.gladioli 3900 GU(G|CAAUG)GCAUAAGCGUGCUUAACUGCGAGAC(CGACAA)GUCGAG B.gladioli 3950 CAGGUGC(GAAA)GC-AGGU|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) B.gladioli 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC B.gladioli 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC B.gladioli 4100 CUCCAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU B.gladioli 4150 CCCAAGGGU|AUGGC(UGUGC)GC-CAUUUAAAGAGGUACG-UGAGCUGG B.gladioli 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG B.gladioli 4250 G-G|CG-UUGGAUAUUU|GA-|AGGGGGC-UGC--------------UCC B.gladioli 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGAACCUCUGGUGUACCGGU|U B.gladioli 4350 GUCAC(GC-CA-)GUGGCA-UCGCCGGGUAGCU-AUGUUCGGAAGAGAUA B.gladioli 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACUCGCCUU|AAGAUGAGAUAUC B.gladioli 4450 C|CU|GGAGG-(cuuga-)-CCUCC-UUG-AAGG|-GU|CGUUC-(GAGA B.gladioli 4500 CC-A)GGACG-UUGAUAG|GUCAG|GUGUG-UAAGCGCA--(GUAA-)-- B.gladioli 4550 UGCGU|UC-AGCUA|A|CUGAUACUAAUU-GCCCGUAAG|GCUUGA-UCC B.gladioli 4600 U-------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.gladioli 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.gladioli 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.gladioli 4750 ~~~|||||| A.faecalis 0 -------------------------------------------------- A.faecalis 50 ---------------------guuauag|---------GAUCAAGCGAA- A.faecalis 100 --UAAGUGCAUAUGAUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG A.faecalis 150 GA|CGCG(GUAG-CC-)U|-GCG-AAAAGCUACGGG|-GAGCU(G-GCAA A.faecalis 200 ACA-)AGCUUUG-AUC-UGUAGAUG|UCCGAAUGGG(GAAA)CCC|accg A.faecalis 250 ua--(--------------------------------------------- A.faecalis 300 -------------------------------------------------- A.faecalis 350 -------------------------------------------------- A.faecalis 400 -------------------------------------------------- A.faecalis 450 ----guaa)--uacggu-AUCC-CAUGCU(CA-AUACA--UA)GGC-AUG A.faecalis 500 -U-G--GAG-C-GAAC|CG-AGUGAACU|GA(ACCA)UCUCAGUA-ACUC A.faecalis 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GGAAGUAGU(GGCGA)G A.faecalis 600 CGA-AAC-CGGA-CCA-GCCU------------------------(---- A.faecalis 650 -)------------------------------------------------ A.faecalis 700 ---------------------------ggauguuuuagcguagugaau-a A.faecalis 750 gucGAAu-gga-a(u-ggaaa)g-uccagc|c(gua)gcAGG(UGAUAGC A.faecalis 800 )CCUGU-aGGC-gaaauucagua-cguggaacuaagcaucg--------- A.faecalis 850 ---------------AACAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC A.faecalis 900 UGAAUAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG A.faecalis 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G A.faecalis 1000 AACCCC(GG-AA-)GGGGA--GUGAAA-UAGAUCCUGAAAUCGU-AUGCA A.faecalis 1050 UACAA-A-CAGUAGGAGCAC--C---------------(----uucgu-) A.faecalis 1100 ---------------G-GUGUGACUGCGUACCU(UUU-GUAU|A)AUGG| A.faecalis 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAAUA)--G A.faecalis 1200 G-GGAGGCGUAGC(GAAA-)GCGAGUCC(GAA-UA)GGGCGau------- A.faecalis 1250 --------------------------u-CAG-UCGCUGGGUGUA-GACCC A.faecalis 1300 GAAAC-CAG-GCGA-UCUAUCCAUGGC|CAGGUUGAAGGCACGG(UAAC) A.faecalis 1350 AC-GUGCUGGAGGACCGAACC-CACUAAU(-GUUGAAAA)AUUAG|GGG- A.faecalis 1400 AUGAG-CUGUGGAUCGGAGU(-GAAAG)GCUAAACAAGCCUGGAGAUAGC A.faecalis 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUAUa----U| A.faecalis 1500 -UAC|UGCCGG|GGGUAG|AGC-ACUGU-UAUGGCUA-GG|-GGGUC(ac A.faecalis 1550 agc)GACUUACCAACCCAUG-GCAAACUCCGAA-UA-|CCG-G-C-A--A A.faecalis 1600 GUAC----A|GUA-CGGGAGACAGAG-CACC-GGGU(GCUAAC)GUCCGG A.faecalis 1650 -ACUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- A.faecalis 1700 AAC-U-AUGG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCAUA- A.faecalis 1750 GACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA A.faecalis 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA A.faecalis 1850 AGAU-GUAA-CGGGGCU-AAGCCAU-A|G|ACCGAAGCU|GCGG|augug A.faecalis 1900 uac----(uau--------------------------------------- A.faecalis 1950 -------------------------------------------------- A.faecalis 2000 -------------------------------------------------- A.faecalis 2050 -------------------------------------------------- A.faecalis 2100 -------------------------------------------------- A.faecalis 2150 -----------------------------------)-----guacacau- A.faecalis 2200 GG-UAGGAGAG|-----CGUU-CCG-UAA--------------------- A.faecalis 2250 -------------------------------------------------- A.faecalis 2300 --------------------------------G-CCUG-UGAAGGUG-U- A.faecalis 2350 U-CC(-GUGA-)GGA--AUGCUGG|AGGUAU-CGGAAGUGAGAAUGC-UG A.faecalis 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAAG)CCCCCU|CGCC-GUA A.faecalis 2450 AGUCCAAGGUUUCCUG-CGCAACG-(UUCAU)CG|G-CGCAGGGUGAGU| A.faecalis 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC A.faecalis 2550 GGG-(UU-AAUAUU)C-CCGC|AC|cg-u-cg-uag-agu---------- A.faecalis 2600 -------------------------------------------------- A.faecalis 2650 -------------------------------------------------- A.faecalis 2700 ------gcgau------gggg--gga-cggauugcagaa-uguu-a-|uc A.faecalis 2750 g-ggg(ug--uuggau-gu---)cc-ccgu-|uggc-------------- A.faecalis 2800 ---gcaucauagaa---------ggca-cuuagg(ca-aa-u-)cc|g-- A.faecalis 2850 ggugcguaa------------uucaagggugug-acug|-ga-|------ A.faecalis 2900 -----uagagc(-uucg--)gcucua-----------aac--uaacu--g A.faecalis 2950 gaag--ca-|guuccaagaaa-agccuc-uaagcuuca--------gc-u A.faecalis 3000 -cuacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGG-ACGGGA- A.faecalis 3050 U-(GAAUA)UUCCAAGGCGC||UUGAGAGAACUCAGGAG----------- A.faecalis 3100 ----AAGGAACUCGGCAAAUUAAUACCGUAAC(-UUCG)GGAGAAGGUAU A.faecalis 3150 |GCCUCauua-guguga---------ugugc(-cugc-)gcaca------ A.faecalis 3200 ---aagcau-gaagagg-C|C(GCA)GUGAAUCGGUG-GCUG|CGACU-- A.faecalis 3250 ---GU(UUACUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G A.faecalis 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU A.faecalis 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU A.faecalis 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( A.faecalis 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA A.faecalis 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCUGAGACUCA|GCGAAGUU A.faecalis 3550 |GACAUGG-UUG(UGAUGAUG)CAAUCUCCCCGCGGC-UAGACGGAAAGA A.faecalis 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGAUUGUGAACCGGCC A.faecalis 3650 UGUGUAGGAUAGGUGGGAGACGUUGAAG--CGUGGUC(GCCA)GAUCGCG A.faecalis 3700 UGGAGUCAUC-C-UUGAAAUACCACC|CUGG-UCUGUUUGCGG-UUCUAA A.faecalis 3750 -CCUAGG----UCCC(--UU-AUC)-GGGAUCGGG-GACCGUGCAUGGUG A.faecalis 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(UAA-AGUGUAAC)GGAGG A.faecalis 3850 A|G|U|UCGAAGGUACGC|UAGAGACGG(UCGGAAA)UCGUCUUGA-UA| A.faecalis 3900 GU(G|CAAUG)GCAUAAGCGUGCUUGACUGUGAGAC(UGACAA)GUCGAA A.faecalis 3950 CAGGUAC(GAAA)GU-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) A.faecalis 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC A.faecalis 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC A.faecalis 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU A.faecalis 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG A.faecalis 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG A.faecalis 4250 G-G|CG-UUGGAUAUUU|GA-|CGGA-GCCUGC--------------UCC A.faecalis 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCACUGGUGUAUCGGU|U A.faecalis 4350 GUCAU(GC-CA-)AUGGCA-UUGCCGAGUAGCU-ACGUACGGAAGAGAUA A.faecalis 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAACUCGUCUG|AAGAUUAGAUAUC A.faecalis 4450 C|C-|GGAGG-(cuuga-)-CCUCC-CUG-UAGG|-GU|CGUCC-(GAGA A.faecalis 4500 CC-A)GGACG-UUGAUAG|GCUGG|GUGUG-GAAGUGCA--(GUAA-)-- A.faecalis 4550 UGCAU|GU-AGCUA|A|CCAGUACUAAUU-GCCCGUGUG|GCUUGA-UCC A.faecalis 4600 U-------|auaaccc---------------------------------- A.faecalis 4650 -------------------------------------------------- A.faecalis 4700 -------------------------------------------------- A.faecalis 4750 ---|||||| B.avium 0 -------------------------------------------------- B.avium 50 ----------------------------|---------GAUCAAGCGAC- B.avium 100 --UAAGUGCACAUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG B.avium 150 GA|CGUG(GUAG-CC-)U|-GCG-AAAAGCUACGGG|-GAGCU(G-GCAA B.avium 200 ACA-)AGCUUUG-AUC-CGUAGAUG|UCCGAAUGGG(GAAA)CCC|acgc B.avium 250 ----(--------------------------------------------- B.avium 300 -------------------------------------------------- B.avium 350 -------------------------------------------------- B.avium 400 -------------------------------------------------- B.avium 450 ----gcaa)---gcagu-AUCC-CUGGCU(GA-AUACA--UA)GGU-CAG B.avium 500 ug-G--AAG-C-GAAC|CG-GGUGAACU|GA(AACA)UCUCAGUA-GCUC B.avium 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GAUAGUAGU(GGCGA)G B.avium 600 CGA-AAU-CGGA-AGA-GCCU------------------------(---- B.avium 650 -)------------------------------------------------ B.avium 700 ---------------------------uuacgauuuagccauccguau-a B.avium 750 a-cGAAc-agu-c(u-ggaac)g-ucuggc|c(gua)gcAGG(UGAUAGC B.avium 800 )CCUGU-Agau-ga-augcgg-u-gguggaacua-gcguaa--------- B.avium 850 ---------------GAGAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUU B.avium 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG B.avium 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GG-A-AAGGCGAAAA-G B.avium 1000 AACCCC(GG-AA-)--GGA--GUGAAA-UAGAUCCUGAAACCGU-GUGCA B.avium 1050 UACA--A-CAGUCGGAGCCU--C---------------(----cuugu-) B.avium 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.avium 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAAUA)--G B.avium 1200 G-GAAGGCGUCA-(GAANA)GC-AGUCC(GAA-UA)GGGCGU-------- B.avium 1250 --------------------------u-gAG-UCGCUGGGUGUA-GACCC B.avium 1300 GAAAC-CAG-AUGA-UCUACCCAUGGC|CAGGUUGAAGGCACGU(GAAC) B.avium 1350 AC-GUGUUGGAGGACCGAACC-CACUAGU(-GUUGAAAA)ACUAG|GGG- B.avium 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAAUCUGGAAAUAGC B.avium 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCAAGua----U| B.avium 1500 -UAC|UGCAGG|GGGUAG|AGC-ACUGU-UAUGGCUA-GG|-GGGUA(cu B.avium 1550 ggc)GACUUACCAAACCAUG-GCAAACUCCGAA-UA-|CCU-G-C-A--A B.avium 1600 GUAC----A|GCU-UGGGAGACAGAC-GACC-GGGU(GCUAAC)GUCCGG B.avium 1650 -ACUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCA- B.avium 1700 AAU-U-AUCA-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCAUA- B.avium 1750 GACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA B.avium 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA B.avium 1850 AGAU-GUAA-C-GG-CU-AAGUGAU-A|A|ACCGAAGCU|GCGG|gugug B.avium 1900 uacu---(uuu--------------------------------------- B.avium 1950 -------------------------------------------------- B.avium 2000 -------------------------------------------------- B.avium 2050 -------------------------------------------------- B.avium 2100 -------------------------------------------------- B.avium 2150 -----------------------------------)-----aguacagc- B.avium 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- B.avium 2250 -------------------------------------------------- B.avium 2300 --------------------------------G-CCUG-CGAAGGUG-G- B.avium 2350 C-UU(-GUGA-)AGG--CUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG B.avium 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAAG)CCCCCU|CGCC-GUA B.avium 2450 AGUCCAAGGUUUCCUG-CGCAACG-(UUCAU)CG|G-CGCAGGGUGAGU| B.avium 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC B.avium 2550 UGG-(UU-AAUAUU)C-CAGC|AC|cg-u-cg-uac-agu---------- B.avium 2600 -------------------------------------------------- B.avium 2650 -------------------------------------------------- B.avium 2700 ------gcgau------gggg--gga-cggaucgcggaa-gauc-a-|uc B.avium 2750 a-ggg(ug--uuggau-gu---)cc-cugu-|ugcu-------------- B.avium 2800 ---gcauugaagau---------ggcg-cuuagg(ca-aa-u-)cc|g-- B.avium 2850 ggcgcguaa------------aucaagggugug--gcu|cga-|------ B.avium 2900 ------gcgag(-caugu-)cucgc-----------gaag--ugauu-g- B.avium 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gc-u B.avium 3000 -guacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGGGACGGGA- B.avium 3050 U-(GAAUA)UUCCAAGGCGC||UUGAGAGAACUC-GGAG----------- B.avium 3100 ----AAGGAACUCGGCAAAUUAAUACCGUAAC(-UUCG)GGAGAAGGUAU B.avium 3150 |GCCCCggua-guguga----------agcc(-ugcg-)cgcu------- B.avium 3200 ---gagcau-gaugggg-U|C(GCA)GAGAAUCGGUG-GCUG|CGACU-- B.avium 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CAAAGAC(GAAA------)G B.avium 3300 UCGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU B.avium 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU B.avium 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.avium 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.avium 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU B.avium 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUACCCGCGGC-UAGACGGAAAGA B.avium 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GAACUGUGAACCGGCC B.avium 3650 UGUGUAGGAUAGGUGGGAGGCGCAGAAC--UCGAGUC(GCCA)GAUUCGA B.avium 3700 GGGAGCCG-C-C-UUGAAAUACCACC|CUGG-UUUGUUUGCGG-UUCUAA B.avium 3750 -CCUUGG----UCCG(--UU-AUC)-CGGAUCGGG-GACAGUGCAUGGUG B.avium 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGUGUAAC)GGAGG B.avium 3850 A|G|C|UCGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| B.avium 3900 GU(G|CAAUG)GCAUAAGCGUGCUUGACUGUGAGAC(UGACA-)GUCGCA B.avium 3950 CAGGAGC(GAA-)-C-GGGA|CAUAGUGAUCCGGUGGUUCUG(AAUGGA) B.avium 4000 AGG|GCCAUCGCUCAAC|GGAUAAA-GGUACUC|UGGG|-AUAACAG|GC B.avium 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC B.avium 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|U-GGGCU(GUAGC---C)-GGU B.avium 4150 CC-AAGGGU|AUG-C(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG B.avium 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UGGU-CCCUAU-CU|GCCGUG B.avium 4250 G-G|CG-UUGGAUACUU|GAA|CAGGAGCCUGC--------------UCC B.avium 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCUCUGGUGUACCGGU|U B.avium 4350 GUCAU(GC-CA-)AU-GCA-UUGCCGGGUAGCU-AAGUACG-AAGAGAUA B.avium 4400 ACCGCU(GAAGGCAUCUA)AGCGG-AAACUCGUCUG|AAGAUUAGGUAUC B.avium 4450 C|C-|AGAGA-(cuaga-)-ucucu-CUA-AAGG|-GU|CGUUC-(AAGA B.avium 4500 CC-A)GGACG-UUGAUAG|GUCGG|GUGUG-GA-AGGCA--(GUAA-)-- B.avium 4550 UGCGU|UA-AGCUA|A|CCGAUACUAAUU-GCC-GUGCG|GCUUGA-UCC B.avium 4600 U-------|auaacucuuuag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.avium 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.avium 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.avium 4750 ~~~|||||| B.bronchis 0 -------------------------------------------------- B.bronchis 50 ----------------------------|---------GAUCAAGCGAC- B.bronchis 100 --UAAGUGCAUAUGGUGGAUG|CCUUGG|CGAUCAC|AG|GCGGAUGAAG B.bronchis 150 GA|CGUA(GUAG-CC-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA B.bronchis 200 ACA-)AGCAUUG-AUC-CGCAGAUA|UCCGAAUGGG(GAAA)CCC|acg- B.bronchis 250 ----(--------------------------------------------- B.bronchis 300 -------------------------------------------------- B.bronchis 350 -------------------------------------------------- B.bronchis 400 -------------------------------------------------- B.bronchis 450 ----gcaa)---gcggu-AUCC-CUGGCU(GA-AUACA--UA)GGC-CAG B.bronchis 500 ug-G--AGG-C-GAAC|CG-GGUGAACU|GA(AACA)UCUCAGUA-GCUC B.bronchis 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GAAAGUAGU(GGCGA)G B.bronchis 600 CGA-AAU-CGGA-AGA-GCCU------------------------(---- B.bronchis 650 -)------------------------------------------------ B.bronchis 700 ---------------------------uuacgauuuagcauuuugcau-a B.bronchis 750 gucGAAc-gga-a(u-ggaaa)g-uccggc|c(gua)gcAGG(UGAUAGC B.bronchis 800 )CCUGU-Agac-ga-augcagag-uguggaacuaggcguaa--------- B.bronchis 850 ---------------GAGAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC B.bronchis 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG B.bronchis 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GG-A-AAGGCGAAAA-G B.bronchis 1000 AACCCC(GG-AA-)--GGA--GUGAAA-UAGAUCCUGAAACCGU-AUGCA B.bronchis 1050 UACA--A-CAGUCGGAGCCU--C---------------(----uuuau-) B.bronchis 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.bronchis 1150 -GUCAGCGACUUAC-AUUC-AGUGGC--AGCUUAACC--(-GAAUA)--G B.bronchis 1200 G-GAAGGCGUCA-(GAANA)GC-AGUCC(GAA-UA)GGGCGU-------- B.bronchis 1250 -------------------------uc-cAG-UCGCUGGGUGUA-GACCC B.bronchis 1300 GAAAC-CAG-AUGA-UCUACCCAUGGC|CAGGUUGAAGGCACGG(UAAC) B.bronchis 1350 AC-GUGCUGGAGGACCGAACC-CACUAGU(-GUUGAAAA)ACUAG|GGG- B.bronchis 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAAUCUGGAAAUAGC B.bronchis 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCAAGua----U| B.bronchis 1500 -UAC|UGCAGG|GGGUAG|AGC-ACUGU-UAUGGCUA-GG|-GGGUC(au B.bronchis 1550 ggc)GACUUACCAAACCAUG-GCAAACUCCGAA-UA-|CCU-G-C-A--A B.bronchis 1600 GUAC----A|GCU-UGGGAGACAGAC-GACC-GGGU(GCUAAC)GUCCGG B.bronchis 1650 -ACUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCG- B.bronchis 1700 AAU-U-AUCG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCAUA- B.bronchis 1750 GACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA B.bronchis 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA B.bronchis 1850 AGAU-GUAA-C-GG-CU-AAGCGAU-A|A|ACCGAAGCU|GCGG|gugug B.bronchis 1900 cacu---(uuu--------------------------------------- B.bronchis 1950 -------------------------------------------------- B.bronchis 2000 -------------------------------------------------- B.bronchis 2050 -------------------------------------------------- B.bronchis 2100 -------------------------------------------------- B.bronchis 2150 -----------------------------------)-----agugcagc- B.bronchis 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- B.bronchis 2250 -------------------------------------------------- B.bronchis 2300 --------------------------------G-CCUG-CGAAGGUG-G- B.bronchis 2350 C-UU(-GUAA-)AGG--CUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG B.bronchis 2400 AC|AUG-AGUA--GCCAUAAAGGGGG(UGAAAAG)CCCCCU|CGCC-GUA B.bronchis 2450 AGUCCAAGGUUUCCUG-CGCAACG-(UUCAU)CG|G-CGCAGGGUGAGU| B.bronchis 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC B.bronchis 2550 UGG-(UU-AAUAUU)C-CAGC|AC|cg-u-cg-uac-agu---------- B.bronchis 2600 -------------------------------------------------- B.bronchis 2650 -------------------------------------------------- B.bronchis 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguc-a-|uc B.bronchis 2750 a-ggg(ug--uuggac-gu---)cc-cugu-|ugcu-------------- B.bronchis 2800 ---gcauugaagau---------ggcg-cuuagg(ca-aa-u-)cc|g-- B.bronchis 2850 ggcgcgaga------------aucaagggugug--gca|cga-|------ B.bronchis 2900 ------gcgag(-caagu-)cucgc-----------gaag--ugauu-g- B.bronchis 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gc-u B.bronchis 3000 -guacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGGGACGGGA- B.bronchis 3050 U-(GAAUA)UUCCAAGGCGC||UUGAGAGAACUCAGGAG----------- B.bronchis 3100 ----AAGGAACUCGGCAAAUUGAUACCGUAAC(-UUCG)GGAGAAGGUAU B.bronchis 3150 |ACCCUggua-guguga----------agcc(-ugcg-)cgcu------- B.bronchis 3200 ---gagcau-gaagggg-U|C(GCA)GAGAAUCGGUG-GCUG|CGACU-- B.bronchis 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CAAAGAC(GAAA------)G B.bronchis 3300 UCGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU B.bronchis 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU B.bronchis 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.bronchis 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.bronchis 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCUGAGACUCA|GCGAAGUU B.bronchis 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUACCCGCGGC-UAGACGGAAAGA B.bronchis 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUGUGAACCGGCC B.bronchis 3650 UGUGUAGGAUAGGUGGGAGGCGCAGAAC--UCGAGUC(GCCA)GAUUCGA B.bronchis 3700 GGGAGCCAUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGCGG-UUCUAA B.bronchis 3750 -CCUUGG----UCCG(--UU-AUC)-CGGAUCGGG-GACAGUGCAUGGUA B.bronchis 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGCGUAAC)GGAGG B.bronchis 3850 A|G|U|UCGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| B.bronchis 3900 GU(G|CAAUG)GCAUAAGCGUGCUUGACUGUGAGAC(UGACA-)GUGA-A B.bronchis 3950 CAGGUGC(GAA-)-C-GGGA|CAUAGUGAUCCGGUGGUUCUG(-AUGGA) B.bronchis 4000 AGG|GCCAUCGCUCAAC|GGAUAAA-GGUACUC|UGGG|-AUAACAG|GC B.bronchis 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC B.bronchis 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GAAGC---A)-GGU B.bronchis 4150 CC-AAGGGU|AUG-C(UGUUC)GC-CAUUUAAAGAGGUACGcUGAGCUGG B.bronchis 4200 GUUUAGAAAC|GUC(GUGA)-GACAGUUCUGGU-CCCUAU-CU|GCCGUG B.bronchis 4250 G-G|CGcUUGGAAACUU|GAG|CAGGAACCUGC--------------UCC B.bronchis 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCUCUGGUGUACCGGU|U B.bronchis 4350 GUCAU(GC-CA-)AUGGCA-UUGCCGGGUAGCU-AAGUACGGAAGAGAUA B.bronchis 4400 ACCGCU(GAAGGCAUCUA)AGCGGGAAACUCGUCUG|AAGAUUAGGUAUC B.bronchis 4450 C|C-|GGGGA-(cuaga-)-ucccc-CUG-AAGG|-GU|CGUUC-(GAGA B.bronchis 4500 CC-A)GGACG-UUGAUAG|GUCGG|GUGUG-GAAGCGCA--(GUAA-)-- B.bronchis 4550 UGCGU|UA-AGCUA|A|CCGAUACUAAUU-GCCCGUGAG|GCUUAA-UCC B.bronchis 4600 U-------|auaacucucaag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.bronchis 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.bronchis 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ B.bronchis 4750 ~~~|||||| B.parapert 0 -------------------------------------------------- B.parapert 50 ----------------------------|---------GAUCAAGCGAC- B.parapert 100 --UAAGUGCAUAUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG B.parapert 150 GA|CGUA(GUAG-CC-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA B.parapert 200 ACA-)AGCAUUG-AUC-CGCAGAUA|UCCGAAUGGG(GAAA)CCC|acg- B.parapert 250 ----(--------------------------------------------- B.parapert 300 -------------------------------------------------- B.parapert 350 -------------------------------------------------- B.parapert 400 -------------------------------------------------- B.parapert 450 ----gcaa)---gcggu-AUCC-CUGGCU(GA-AUACA--UA)GGC-CAG B.parapert 500 ug-G--AGG-C-GAAC|CG-GGUGAACU|GA(AACA)UCUCAGUA-GCUC B.parapert 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GAAAGUAGU(GGCGA)G B.parapert 600 CGA-AAU-CGGA-AGA-GCCU------------------------(---- B.parapert 650 -)------------------------------------------------ B.parapert 700 ---------------------------uuacgauuuagcauuuugcau-a B.parapert 750 gucGAAc-gga-a(u-ggaaa)g-uccggc|c(gua)gcAGG(UGAUAGC B.parapert 800 )CCUGU-Agac-gaaaugcagag-uguggaacuaggcguaa--------- B.parapert 850 ---------------GAGAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC B.parapert 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG B.parapert 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GG-A-AAGGCGAAAA-G B.parapert 1000 AACCCC(GG-AA-)--GGA--GUGAAA-UAGAUCCUGAAACCGU-AUGCA B.parapert 1050 UACAA-A-CAGUCGGAGCCU--C---------------(----uuuau-) B.parapert 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.parapert 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-GAGCUUAACC--(-GAAUA)--G B.parapert 1200 G-GAAGGCGUCA-(gaana)GCAgnUCC(GAA-UA)GGGCGU-------- B.parapert 1250 --------------------------c-CAG-UCGCUGGGUGUA-GACCC B.parapert 1300 GAAAC-CAG-AUGA-UCUACCCAUGGC|CAGGUUGAAGGCACGG(UAAC) B.parapert 1350 AC-GUCGUGGAGGACCGAACC-CACUAGU(-GUUGAAAA)ACUAG|GGG- B.parapert 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAAUCUGGAAAUAGC B.parapert 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCAAGua----U| B.parapert 1500 -UAC|UGCAGG|GGGUAG|AGC-ACUGU-UAUGGCUA-GG|-GGGUC(au B.parapert 1550 ggc)GACUUACCAAACCAUG-GCAAACUCCGAA-UA-|CCU-G-C-A--A B.parapert 1600 GUAC----A|GCU-UGGGAGACAGAC-GACC-GGGU(GCUAAC)GUCCGG B.parapert 1650 -ACUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCG- B.parapert 1700 AAU-U-AUCG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCAUA- B.parapert 1750 GACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA B.parapert 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA B.parapert 1850 AGAU-GUAA-CGGGGCU-AAGCGAU-A|A|ACCGAAGCU|GCGG|gugug B.parapert 1900 cacu---(uuu--------------------------------------- B.parapert 1950 -------------------------------------------------- B.parapert 2000 -------------------------------------------------- B.parapert 2050 -------------------------------------------------- B.parapert 2100 -------------------------------------------------- B.parapert 2150 -----------------------------------)----agu-caggcg B.parapert 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- B.parapert 2250 -------------------------------------------------- B.parapert 2300 --------------------------------G-CCUG-CAAAGGUG-G- B.parapert 2350 C-UU(-GUAA-)AGG--CUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG B.parapert 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAAG)CCCCCU|CGCC-GUA B.parapert 2450 AGUCCAAGGUUUCCUG-CGCAACG-(UUCAU)CG|G-CGCAGGGUGAGU| B.parapert 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGCUGAUGG-GAAGC B.parapert 2550 UGG-(UU-AAUAUU)C-CAGC|AC|cg-u-cg-uac-agu---------- B.parapert 2600 -------------------------------------------------- B.parapert 2650 -------------------------------------------------- B.parapert 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguc-a-|uc B.parapert 2750 a-ggg(ug--uuggac-gu---)cc-cugu-|ugcu-------------- B.parapert 2800 ---gcauugaagau---------ggcg-cuuagg(ca-aa-u-)cc|g-- B.parapert 2850 ggcgcgaga------------aucaagggugug--gca|cga-|------ B.parapert 2900 ------gcgag(-caagu-)cucgc-----------gaag--ugauu-g- B.parapert 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gc-u B.parapert 3000 -guacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGGGACGGGA- B.parapert 3050 U-(GAAUA)UUCCAAGGCGC||UUGAGAGAACUCAGGAG----------- B.parapert 3100 ----AAGGAACUCGGCAAAUUGAUACCGUAAC(-UUCG)GGAGAAGGUAU B.parapert 3150 |ACCCUggua-guguga----------agcc(-ugcg-)cgcu------- B.parapert 3200 ---gagcau-gaagggg-U|C(GCA)GAGAAUCGGUG-GCUG|CGACU-- B.parapert 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CAAAGAC(GAAA------)G B.parapert 3300 UCGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU B.parapert 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU B.parapert 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.parapert 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.parapert 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCUGAGACUCA|GCGAAGUU B.parapert 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUACCCGCGGC-UAGACGGAAAGA B.parapert 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUGUGAACCGGCC B.parapert 3650 UGUGUAGGAUAGGUGGGAGGCGCAGAAC--UCGAGUC(GCCA)GAUUCGA B.parapert 3700 GGGAGCCAUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGCGG-UUCUAA B.parapert 3750 -CCUUGG----UCCG(--UU-AUC)-CGGAUCGGG-GACAGUGCAUGGUA B.parapert 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGCGUAAC)GGAGG B.parapert 3850 A|G|U|UCGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| B.parapert 3900 GU(G|CAAUG)GCAUAAGCGUGCUUGACUGUGAGAC(UGACA-)GUCGAA B.parapert 3950 CAGGUGC(GAA-)-C-GGGA|CAUAGUGAUCCGGUGGUUCUG(-AUGGA) B.parapert 4000 AGG|GCCAUCGCUCAAC|GGAUAAA-GGUACUC|UGGG|-AUAACAG|GC B.parapert 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC B.parapert 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GAAGC---A)-GGU B.parapert 4150 CC-AAGGGU|AUG-C(UGUUC)GC-CAUUUAAAGAGGUACGCUGAGCUGG B.parapert 4200 GUUUAGAAAC|GUC(GUGA)AGACAGUUGUGGU-CCCUAU-CU|GCCGUG B.parapert 4250 G-G|CGCUUGGAAACUU|GAg|CAGGAACCUGC--------------UCC B.parapert 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCUCUGGUGUACCGGU|U B.parapert 4350 GUCAU(GC-CA-)AUGGCA-UUGCCGGGUAGCU-AAGUACGGAAGAGAUA B.parapert 4400 ACCGCU(GAAGGCAUCUA)AGCGG-AAACUCGUCUG|AAGAUUAGGUAUC B.parapert 4450 C|C-|GGGA--(cuaga-)--UCCCCCUG-AAGG|-GU|CGUUC-(GAGA B.parapert 4500 CC-A)GGACG-UUGAUAG|GUCGG|GUGUG-GAAGCGCA--(GUAA-)-- B.parapert 4550 UGCGU|UA-AGCUA|A|CCGAUACUAAUU-GCCCGUGAG|GCUUGA-UCC B.parapert 4600 U-------|auaacucucaagucuuaauuauuaccgcuggacaguaacgc B.parapert 4650 cagcgccguucauaccaacacaacauacacagcaacccgucgcugccagu B.parapert 4700 cccaaccgacugccaggcgacgcugugcuucuuccagauucaagccguu~ B.parapert 4750 ~~~|||||| B.pertussi 0 -------------------------------------------------- B.pertussi 50 ----------------------------|---------GAUCAAGCGAC- B.pertussi 100 --UAAGUGCAUAUGGUGGAUG|CCUUGG|CGAUCAC|AG|GC-GAUGAAG B.pertussi 150 GA|CGUA(GUAG-CC-)U|-GCG-AAAAGCUGCGGG|-GAGCU(G-GCAA B.pertussi 200 ACA-)AGCAUUG-AUC-CGCAGAUA|UCCGAAUGGG(GAAA)CCC|acg- B.pertussi 250 ----(--------------------------------------------- B.pertussi 300 -------------------------------------------------- B.pertussi 350 -------------------------------------------------- B.pertussi 400 -------------------------------------------------- B.pertussi 450 ----gcaa)---gcggu-AUCC-CUGGCU(GA-AUACA--UA)GGC-CAG B.pertussi 500 ug-G--AGG-C-GAAC|CG-GGUGAACU|GA(AACA)UCUCAGUA-GCUC B.pertussi 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GAAAGUAGU(GGCGA)G B.pertussi 600 CGA-AAU-CGGA-AGA-GCCU------------------------(---- B.pertussi 650 -)------------------------------------------------ B.pertussi 700 ---------------------------uuacgauuuagcauuuugcau-a B.pertussi 750 gucGAAc-gga-a(u-ggaaa)g-uccgGC|c(gua)gcAGG(UGAUAGC B.pertussi 800 )CCUGU-Agac-gaaaugcagag-uguggaacuaggcguaa--------- B.pertussi 850 ---------------GAGAAGUAGGGCGGGA(CACGUG-AAA)UCCUGUC B.pertussi 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUG B.pertussi 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GG-A-AAGGCGAAAA-G B.pertussi 1000 AACCCC(GG-AA-)--GGA--GUGAAA-UAGAUCCUGAAACCGU-AUGCA B.pertussi 1050 UACAA-A-CAGUCGGAGCCU--C---------------(----uuuau-) B.pertussi 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| B.pertussi 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-GAGCUUAACC--(-GAAUA)--G B.pertussi 1200 G-GAAGGCGUCA-(gaana)GCAgnUCC(GAA-UA)GGGCGU-------- B.pertussi 1250 --------------------------c-CAG-UCGCUGGGUGUA-GACCC B.pertussi 1300 GAAAC-CAG-AUGA-UCUACCCAUGGC|CAGGUUGAAGGCACGG(UAAC) B.pertussi 1350 AC-GUCGUGGAGGACCGAACC-CACUAGU(-GUUGAAAA)ACUAG|GGG- B.pertussi 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAAUCUGGAAAUAGC B.pertussi 1450 UGGUUCUCUCCGAAAACUAU(-UUAG)GUAGUGC|-CUCAAGua----U| B.pertussi 1500 -UAC|UGCAGG|GGGUAG|AGC-ACUGU-UAUGGCUA-GG|-GGGUC(au B.pertussi 1550 ggc)GACUUACCAAACCAUG-GCAAACUCCGAA-UA-|CCU-G-C-A--A B.pertussi 1600 GUAC----A|GCU-UGGGAGACAGAC-GACC-GGGU(GCUAAC)GUCCGG B.pertussi 1650 -ACUC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCG- B.pertussi 1700 AAU-U-AUCG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCAUA- B.pertussi 1750 GACAGUCAGGAGGUUGGC(UUAGAAGCA)GCCAC-CCU|U(UAA)A|GAA B.pertussi 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA B.pertussi 1850 AGAU-GUAA-CGGGGCU-AAGCGAU-A|A|ACCGAAGCU|GCGG|gugug B.pertussi 1900 cacu---(uuu--------------------------------------- B.pertussi 1950 -------------------------------------------------- B.pertussi 2000 -------------------------------------------------- B.pertussi 2050 -------------------------------------------------- B.pertussi 2100 -------------------------------------------------- B.pertussi 2150 -----------------------------------)----agu-caggcg B.pertussi 2200 GG-UAGGAGAG|-----CGUU-CUG-UAA--------------------- B.pertussi 2250 -------------------------------------------------- B.pertussi 2300 --------------------------------G-CCUG-CAAAGGUG-G- B.pertussi 2350 C-UU(-GUAA-)AGG--CUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG B.pertussi 2400 AC|AUG-AGUA--GCGAUAAAGGGGG(UGAAAAG)CCCCCU|CGCC-GUA B.pertussi 2450 AGUCCAAGGUUUCCUG-CGCAACG-(UUCAU)CG|G-CGCAGGGUGAGU| B.pertussi 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-u-GCGU-AGCUGAUGG-GAAGC B.pertussi 2550 UGG-(UU-AAUAUU)C-CAGC|AC|cg-u-cg-uac-agu---------- B.pertussi 2600 -------------------------------------------------- B.pertussi 2650 -------------------------------------------------- B.pertussi 2700 ------gcgau------gggg--gga-cggaucgcggaa-gguc-a-|uc B.pertussi 2750 a-ggg(ug--uuggac-gu---)cc-cugu-|ugcu-------------- B.pertussi 2800 ---gcauugaagau---------ggcg-cuuagg(ca-aa-u-)cc|g-- B.pertussi 2850 ggcgcgaga------------aucaagggugug--gca|cga-|------ B.pertussi 2900 ------gcgag(-caagu-)cucgc-----------gaag--ugauu-g- B.pertussi 2950 gaag--ug-|guuccaagaaa-agccuc-uaagcuuca--------gc-u B.pertussi 3000 -guacg--a-g|A|CCGUACCGCAAACC(GACACA)GG|UGGGACGGGA- B.pertussi 3050 U-(GAAUA)UUCCAAGGCGC||UUGAGAGAACUCAGGAG----------- B.pertussi 3100 ----AAGGAACUCGGCAAAUUGAUACCGUAAC(-UUCG)GGAGAAGGUAU B.pertussi 3150 |ACCCUggua-guguga----------agcc(-ugcg-)cgcu------- B.pertussi 3200 ---gagcau-gaagggg-U|C(GCA)GAGAAUCGGUG-GCUG|CGACU-- B.pertussi 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CAAAGAC(GAAA------)G B.pertussi 3300 UCGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU B.pertussi 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU B.pertussi 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( B.pertussi 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA B.pertussi 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCUGAGACUCA|GCGAAGUU B.pertussi 3550 |GAAGUGU-UUG(UGAUGAUG)CAAUCUACCCGCGGC-UAGACGGAAAGA B.pertussi 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUGUGAACCGGCC B.pertussi 3650 UGUGUAGGAUAGGUGGGAGGCGCAGAAC--UCGAGUC(GCCA)GAUUCGA B.pertussi 3700 GGGAGCCAUC-C-UUGAAAUACCACC|CUGG-UUUGUUUGCGG-UUCUAA B.pertussi 3750 -CCUUGG----UCCG(--UU-AUC)-CGGAUCGGG-GACAGUGCAUGGUA B.pertussi 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGCGUAAC)GGAGG B.pertussi 3850 A|G|U|UCGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| B.pertussi 3900 GU(G|CAAUG)GCAUAAGCGUGCUUGACUGUGAGAC(UGACAG)UGCGAA B.pertussi 3950 CAGGUGC(GAA-)-C-GGGA|CAUAGUGAUCCGGUGGUUCUG(-AUGGA) B.pertussi 4000 AGG|GCCAUCGCUCAAC|GGAUAAA-GGUACUC|UGGG|-AUAACAG|GC B.pertussi 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC B.pertussi 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|U-GGGCU(GUAGC---C)-GGU B.pertussi 4150 CC-AAGGGU|AUG-C(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG B.pertussi 4200 GUUUA-AAAC|GUC(GUGA)AGACAGUU-UGGU-CCCUAU-CU|GCCGUG B.pertussi 4250 G-G|CG-UUGGAUACUU|GAA|CAGGAGCCUGC--------------UCC B.pertussi 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACCUCUGGUGUACCGGU|U B.pertussi 4350 GUCAU(GC-CA-)AUGGCA-UUGCCGGGUAGCU-AAGUACGGAAGAGAUA B.pertussi 4400 ACCGCU(GAAGGCAUCUA)AGCGG-AAACUCGUCUG|AAGAUUAGGUAUC B.pertussi 4450 C|C-|GGGA--(cuaga-)--UCCCCCUG-AAGG|-GU|CGUUC-(GAGA B.pertussi 4500 CC-A)GGACG-UUGAUAG|GUCGG|GUGUG-GAAGCGCA--(GUAA-)-- B.pertussi 4550 UGCGU|UA-AGCUA|A|CCGAUACUAAUU-GCCCGUGAG|GCUUGA-UCC B.pertussi 4600 U-------|auaacucucaagucuuaauuauuaccgcuggacaguaacgc B.pertussi 4650 cagcgccguucauaccaacacaacauacacagcaacgggucgcugccagu B.pertussi 4700 cccaaccgacugccaggcgacgcugugcuucuuccagauucaagccguu~ B.pertussi 4750 ~~~|||||| T.ferrooxi 0 -------------------------------------------------- T.ferrooxi 50 ----------------------------|---------GGUCAAGUGAA- T.ferrooxi 100 --UAAGGGCAUACGGUGGAUG|CCUUGG|CAGAGAC|AG|GC-GAUGAAG T.ferrooxi 150 GA|CGUG(GAUA-CC-)U|-GCG-AAAAGCCUCGGG|-GAGCU(G-GUAA T.ferrooxi 200 GCA-)AGCUUUG-AUC-CGGGGAUA|UCCGAAUGGG(GCAA)CCC|agcc T.ferrooxi 250 aga-(--------------------------------------------- T.ferrooxi 300 -------------------------------------------------- T.ferrooxi 350 -------------------------------------------------- T.ferrooxi 400 -------------------------------------------------- T.ferrooxi 450 ----guga)-ucugguu-AUUG-CACACU(GA-AUACA--ua)GGU-GUG T.ferrooxi 500 -U-A--AAG-C-caAC|GC-GGUGAACU|GA(AACA)UCUCAGUA-GCUG T.ferrooxi 550 CAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-CGUAGUAGC(GGCGA)G T.ferrooxi 600 CGA-ACC-GGGA-GCA-GCCuuca---------------------(---- T.ferrooxi 650 -)------------------------------------------------ T.ferrooxi 700 ---------------------------ugaug---uagcguaagacuu-a T.ferrooxi 750 ggaGAAc-gac-c(u-gggaa)g-guuggc|c(gua)guGG-(UGAUAGC T.ferrooxi 800 )CCCGU-AUC--gaaaagacuuu-cguggaacuaggcauga--------- T.ferrooxi 850 ---------------GCAAAGUAGGGCGGGA(CACGUG-GAA)UCCUGUC T.ferrooxi 900 UGAAGAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUC T.ferrooxi 950 UCUGACCGAUAGUG-AAC-CAGUACC(GUGA)aGGCA-AAGGCGAAAA-G T.ferrooxi 1000 AACCGC(GGAGA-)G-GCA--GUGAAA-UAGAUCCUGAAACCGU-AUGCC T.ferrooxi 1050 UACAA-G-CAGUGGGAGCCC--G---------------(---uuuu-a-) T.ferrooxi 1100 ---------------C-GGGUGACUGCGUACCU(UUU-GUAU|C)AUGG| T.ferrooxi 1150 -GUCAGCGACUUAC-UUUUCUGUGGC-gAGCUUAACC--(gAAGUA)--G T.ferrooxi 1200 GuGAAGCCGUAGG(GAAA-)CCGAGUCU(GAA-UA)GGGCAC-------- T.ferrooxi 1250 --------------------------a--uG-UCGCAGGGAGUA-GACCC T.ferrooxi 1300 -AAAC-C-G-ACGA-UCUAUCCAUGGU|CAG-AUGAAGGUGGG-(UAAA) T.ferrooxi 1350 AC-CUACUGGAGGUCCGAACCcCAcgccc(cGUUGAAAA)gguc-|GGG- T.ferrooxi 1400 AU-AA-CUGUG-AUAGGAGU(-GAAAG)GCUAAACAAGUCC-GAGAUAGC T.ferrooxi 1450 UGGUUCUCCCCGAAAGCUAU(-UGAG)GUAG-GC|CGUCGCGua----U| T.ferrooxi 1500 -uac|CUGCCG|GGGUAG|AGC-ACUGU-UACGGCUA--G|-GGGCU(gu T.ferrooxi 1550 cac)GGCUUAGGAACCCGUU-GCAAACUCCGAA-UAc|CGG-C-A-G--- T.ferrooxi 1600 uag----AG|-CG-CGGCAGACAGUCUCGGC-GGGU(GCUAAG)CUCCGU T.ferrooxi 1650 -CGUC-AAGAGGG(AUGAAAAC)CCCAGACCGCCAGCUAAG-GU|CCCC- T.ferrooxi 1700 AAA-U-AUGG-C-UCA-GU-------GGAAACGAUGUG-G-AAGGCCCA- T.ferrooxi 1750 GACAGCUAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA T.ferrooxi 1800 AGC(GUAAUA)GC|UCACUAGU-----CGAGU-CGG-CC--CGC|GCGGA T.ferrooxi 1850 AGAU-UUAA-CGGGGCUCAAGCCAU-A|U|ACCGAAGCU|GCGG|gugug T.ferrooxi 1900 ucc----(uuag-------------------------------------- T.ferrooxi 1950 -------------------------------------------------- T.ferrooxi 2000 -------------------------------------------------- T.ferrooxi 2050 -------------------------------------------------- T.ferrooxi 2100 -------------------------------------------------- T.ferrooxi 2150 -----------------------------------)-----ggacacgc- T.ferrooxi 2200 GG-UAGGGGAG|-----CGUU-CGG-UAA--------------------- T.ferrooxi 2250 -------------------------------------------------- T.ferrooxi 2300 --------------------------------G-CCGA-U-AAGGUG-U- T.ferrooxi 2350 G-UU(-GUGA-)GGC--AUGCUGG|AGGUAU-CCGAAGUGCGAAUG--UG T.ferrooxi 2400 AC|AUG-AGUA--GCGAUAAAGGGUG(UGAAAAC)CACCCU|CGCC-GUA T.ferrooxi 2450 AGCCCAAGGUU-CCUG-CGCA-AG-(UCAAU)CU|G-CGCAGGGUGAGU| T.ferrooxi 2500 CGG|C-CCCUAAGGCGAGGCC(GAGA)-G-GCGU-AGCUGAUGG-GAAAU T.ferrooxi 2550 CGG-(UU-AAUAUU)C-CGAU|AC|ug-u-ua-caa-gau---------- T.ferrooxi 2600 -------------------------------------------------- T.ferrooxi 2650 -------------------------------------------------- T.ferrooxi 2700 ------gcgau------ggag--uga-cggagaaaggua-gcuc-a-|gc T.ferrooxi 2750 c-ggg(ug--uuggau-gu---)cu-gggu-|uuag-------------- T.ferrooxi 2800 ---gcgu-uaggga---------gucu-cucagg(ca-aa-u-)cg|g-- T.ferrooxi 2850 gaaggcca-------------uuc-gaggcgug-auga|cga-|------ T.ferrooxi 2900 ------uccuc(-uacg--)gagga-----------gaag--ugagu--g T.ferrooxi 2950 aacu-acg-|cuuccaggaaa-agcuuc-uaagcucua--------gu-c T.ferrooxi 3000 -uugug--aug|A|CCGUACCCCAAACC(GACACA)GG|UGG-GCAGGA- T.ferrooxi 3050 A-(GAAUA)UUCCAAGGCGC||UUGAGAGACCUCGGGUG----------- T.ferrooxi 3100 ----AAGGAACUCGGCAAAUUGACACCGUAAC(-UUCG)GAAGAAGGUGU T.ferrooxi 3150 |GCCCUgaua-gguug---------uacucc(-cuugc)ggag------- T.ferrooxi 3200 ---aaggcc-gaagggg-U|C(GCA)GAGAU-CGGUG-GCUG|CAACU-- T.ferrooxi 3250 ---GU(UUAACAAAA)ACACAGG-CUCUG|CAAAGAC(GAAA------)G T.ferrooxi 3300 UCGACGU-AUAGGGUCUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU T.ferrooxi 3350 GAGGGG----GU--------(G-CAA)-----------GC------UCUU T.ferrooxi 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( T.ferrooxi 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA T.ferrooxi 3500 AUGGCGUAAUGA-UGGCCACACUGUCUCCACCCGAGACUCA|GCGAAGUU T.ferrooxi 3550 |GAAGUCG-CUG(UGAAGAUA)CAGCGUUCCCGUGGC-AAGACGGAAAGA T.ferrooxi 3600 CCCCGUGC|ACCU-UUACUAC|AACUUAGCAUG|GGACCUUGAGAUGAUU T.ferrooxi 3650 UGUGUAGGAUAGGUGGGAGGCUGUGAAA--CCGGGAC(GCUA)GUUCUGG T.ferrooxi 3700 UGGAGCCAGUCC-UUGAAAUACCACC|CUGG-UGAUCUUGGGG-UUCUAA T.ferrooxi 3750 -CCUCGG----UCCG(--ug-auc)-CGGAUCAGG-GACAGUGUUUGGUG T.ferrooxi 3800 GG-UAGUUUGACUG(GGG)CGGUC|UCCUCC(CAA-AGAGUAAC)GGAGG T.ferrooxi 3850 A|G|C|ACGAAGGUACCC|UCAGCGCGG(UCGGAAA)UCGCGCAGU-GA| T.ferrooxi 3900 GU(G|CAAAG)GCACAAGGGUGCUUGACUGCGAGAC(AGACAA)GUCGAG T.ferrooxi 3950 CAGGUGC(GAAA)GC-AGGU|CUUAGUGAUCCGGUGGUUCUG(UAUGGA) T.ferrooxi 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC T.ferrooxi 4050 UGA--UUCCCCCCAAGA(G-UUC-ACA)UCGACGGGG-GAGU-UUGGCAC T.ferrooxi 4100 CUCGAUGUC|GGCU|C|AUCGC|AUCC|UGGGGCU(GUAGC---C)uGGU T.ferrooxi 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGCGGUACG-CGACCUGG T.ferrooxi 4200 GUUCA-GAAC|GU-(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCAUG T.ferrooxi 4250 G-G|CG-UUGGAGAUUU|GA-|AGGAAGC-UGC--------------UCC T.ferrooxi 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGUACU-CUGGUGUUCCGGU|U T.ferrooxi 4350 GUUCU(GC-CA-)AGGGCA-UUGCCGGGUAGCU-AUGUACGGUCGGGAUA T.ferrooxi 4400 ACCGCU(GAAAGCAUCUA)AGCGGAAG-CCA-UCCU|AAGAUGAGAUCUC T.ferrooxi 4450 C|C-|-GGGC-(-auaa-)-GCCCC-CUG-AAGG|-GA|CGUGG-(AAGA T.ferrooxi 4500 CU-A)CCACG-UUGAU-G|GCUCC|-UGUG-GAAGCGCA--(GCAA-)-- T.ferrooxi 4550 UGCGU|GC-AGCUA|A|GGAGUACUAAUC-GGCCGUGCG|GCUUGA-CCA T.ferrooxi 4600 U-------|-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.ferrooxi 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.ferrooxi 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.ferrooxi 4750 ~~~|||||| X.fragaria 0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~ X.fragaria 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ X.fragaria 150 ~~|~~~~(~~~~~~~~)~|~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~~ X.fragaria 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ X.fragaria 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 450 ~~~~~~~~)~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ X.fragaria 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~|~~(~~~~)~~~~~~~~~~~~~ X.fragaria 550 ~~~~~~~~~~~~~~(~~~~~~~)~~~~~|~~~~~~~~~~~~~(~~~~~)~ X.fragaria 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~ X.fragaria 650 ~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~(~~~~~~~ X.fragaria 800 )~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~)~~~~~~~ X.fragaria 900 ~~~~~~~~UGG-GG(GACCAC)CC-UCC-AAGCCUAA----GUACUCCUC X.fragaria 950 UACGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G X.fragaria 1000 CACCCG(GACAA-)GGGGA--GUGAAA-CAGAUCCUGAAAUCGG-AAGCC X.fragaria 1050 UACAA-G-CAGUCGGAGCCG--C---------------(----caag--) X.fragaria 1100 -------------cGC-G-GUGACGGCGUACCU(UUU-GUAU|A)AUGG| X.fragaria 1150 -GUCAGCGACUUCA-UGUG-UCGAGC-AAGCUUAAGCC-(-G-UUA)-GG X.fragaria 1200 U-GUAGGCGCAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGc-------- X.fragaria 1250 --------------------------U-AAG-UUCGACGUAUGAcGACCC X.fragaria 1300 GAAAC-CAG-GUGA-UCUAUCCAUGAG|CAGGAUGAAGGUUGGG(UAAC) X.fragaria 1350 AC-CAACUGGAGGUCCGAACC-GGUGACU(-GUUGAAAA)AGCCU|CGG- X.fragaria 1400 AUGAC-UUGUGGAUAGGGGU(-GAAAG)GCCAAUCAAACCUGGACAUAGC X.fragaria 1450 UGGUUCUCCGCGAAAUCUAU(-UUAG)GUAGAGC|-guccgacga---A- X.fragaria 1500 -UUC|CUUGGG|GGGUAG|AGC-ACUGG-AUGGUUGC-GG|-GCUGC(gc X.fragaria 1550 ga-)GCGGUACCAAUACUAA-CCAAACUCCGAA-UA-|CCC-A-A-G--A X.fragaria 1600 GAAC----U|AUC-GGGCAGACACAC--GGC-GGGU(GCUAAC)GUCCGU X.fragaria 1650 -CGUG-AAAAGGG(-AAACAA-)CCCUAACCAUCAUCUAAG-GC|CCCC- X.fragaria 1700 AAGUC-ACGG-C-UAA-GUG------GGAAACGAUGUG-GGAUUGCUUU- X.fragaria 1750 GACAAUCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA X.fragaria 1800 AGC(GUAACA)GC|UCACUGAU-----CAAGC-GAU-CC--UGC|GCGGA X.fragaria 1850 AAAU-GUWA-CGGGGCUCAAGCCGU-G|C|GCCGAAGAU|AUGG|guuug X.fragaria 1900 cag----(uuua-------------------------------------- X.fragaria 1950 -------------------------------------------------- X.fragaria 2000 -------------------------------------------------- X.fragaria 2050 -------------------------------------------------- X.fragaria 2100 -------------------------------------------------- X.fragaria 2150 -----------------------------------)-----cugcaagc- X.fragaria 2200 GG-UAGCGGAR|-----CGU~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2350 ~~~~(~~~~~~)~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2400 ~~|~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~)~~~~~~|~~~~~~~~ X.fragaria 2450 ~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~|~~~~~~~~~~~~~~| X.fragaria 2500 ~~~|~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2550 ~~~~(~~~~~~~~~)~~~~~~|~~|~~~~~~~~~~~-~~~~~~~~~~~~~ X.fragaria 2600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~ X.fragaria 2750 ~~~~~(~~~~~~~~~~~~~~~~)~~~~~~~~|~~~~~~~~~~~~~~~~~~ X.fragaria 2800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~)~~|~~~ X.fragaria 2850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~|~~~~~~ X.fragaria 2900 ~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 2950 ~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 3000 ~~~~~~~~~~~|~|~~~~~~~~~~~~~~(~~~~~~)~~|~~~~~~~~~~~ X.fragaria 3050 ~~(~~~~~)~~~~~~~~~~~||~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~ X.fragaria 3150 |~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~~~~~~ X.fragaria 3200 ~~~~~~~~~~~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~~~ X.fragaria 3250 ~~~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~(~~~~~~~~~~)~ X.fragaria 3300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~ X.fragaria 3350 ~~~~~~~~~~~~~~~~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 3400 ~~~~~~~~~~|~~~~~~~~~|~~~~|~~~~~~(~~~~~~~)~~~~~~|~( X.fragaria 3450 ~~~)~~~~~~~~~~~~~~~~~|~~~~~~(~~~~~)~~~~~~|~~~~~~~~ X.fragaria 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ X.fragaria 3550 |~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 3600 ~~~~~~~~|~~~~~~~~~~~~|~~~~~~~~~~~|~~~~~~~~~~~~~~~~ X.fragaria 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~)~~~~~~~ X.fragaria 3700 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 3750 ~~~~~~~~~~~~~~~(~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 3800 ~~~~~~~~~~~~~~(~~~)~~~~~|~~~~~~(~~~~~~~~~~~~)~~~~~ X.fragaria 3850 ~|~|~|~~~~~~~~~~~~|~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~| X.fragaria 3900 ~~(~|~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~)~~~~~~ X.fragaria 3950 ~~~~~~~(~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~(~~~~~~) X.fragaria 4000 ~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~~~|~~ X.fragaria 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 4100 ~~~~~~~~~|~~~~|~|~~~~~|~~~~|~~~~~~~(~~~~~~~~~)~~~~ X.fragaria 4150 ~~~~~~~~~|~~~~~(~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 4200 ~~~~~~~~~~|~~~(~~~~)~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ X.fragaria 4250 ~~~|~~~~~~~~~~~~~|~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 4300 (~~~~~~(~~~~)~~~~~)~~~~~~~|~~~~~~~~~~~~~~~~~~~~~|~ X.fragaria 4350 ~~~~~(~~~~~~)~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 4400 ~~~~~~(~~~~~~~~~~~)~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ X.fragaria 4450 ~|~~|~~~~~~(~~~~~~)~~~~~~~~~~~~~~~|~~~|~~~~~~(~~~~ X.fragaria 4500 ~~~~)~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~(~~~~~)~~ X.fragaria 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ X.fragaria 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ X.fragaria 4750 ~~~|||||| T.cuprin.1 0 -------------------------------------------------- T.cuprin.1 50 ----------------------------|---------GAUCAAGCGAC- T.cuprin.1 100 --UAAGUGCAUACGGUGGAUG|CCUUGG|CGAGUAC|AG|GC-GAC-AAG T.cuprin.1 150 GA|CGUG(GAAG-CC-)U|-GCG-UUAAGCUGCGGG|-GAGCU(GUGCAA T.cuprin.1 200 UCA-)AGCUUUG-AUC-CGUAAAUG|UCCGAAUGGG(GAAA)CCC|accc T.cuprin.1 250 ----(--------------------------------------------- T.cuprin.1 300 -------------------------------------------------- T.cuprin.1 350 -------------------------------------------------- T.cuprin.1 400 -------------------------------------------------- T.cuprin.1 450 ----guaa)-----ggu-AUCU---UGCU(GA-AUACA--UA)GGC-A-- T.cuprin.1 500 aa-g--aAG-G-cgAC|CG-AGUGAACU|GA(AACA)UCUAAGUA-ACUC T.cuprin.1 550 GAGGAAAAGAAAUC(cAACC--)GAGAU|UCC-GAAAGUAGU(GGCGA)G T.cuprin.1 600 CGA-AAU-CG-A-cCA-GCCugg----------------------(---- T.cuprin.1 650 -)------------------------------------------------ T.cuprin.1 700 ----------------------------uacguuuuagcguagauauc-a T.cuprin.1 750 gggGAAu-cuc-u(u-ggaaa)a-gagagc|c(aca)guGGG(UGAUAGC T.cuprin.1 800 )CCCGU-ACCU-aaaaauauuug-cguggaacuaggcguac--------- T.cuprin.1 850 ---------------GACAAGUAGGGCGGGA(CACGUG-UAA)UCCUGUC T.cuprin.1 900 UGAACAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUA T.cuprin.1 950 GUCGACC-AUAGUG-AAC-AAGUACC(GUGA)-GGGAAAAGGUGAAAA-G T.cuprin.1 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGU-AUGCA T.cuprin.1 1050 UACAAAA-AAGUCGGAGCCU--C---------------(----gcaa--) T.cuprin.1 1100 ---------------G-GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| T.cuprin.1 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAAUA)--G T.cuprin.1 1200 G-GAAGGCGUAGG(GAAA-)CCGAGUCC(GAA-CA)GGGCGU-------- T.cuprin.1 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC T.cuprin.1 1300 GAAAC-CGG-AUGA-UCUAUCCAUGGC|CAGGAUGAAGGCUGGG(UAAC) T.cuprin.1 1350 AC-CAGCUGGAGGUCCGGAUC-CACUAGU(-GUUGCAAA)AUUAG|CGG- T.cuprin.1 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAAUCCGGAAAUAGC T.cuprin.1 1450 UGGUUCUCCUCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUa----U| T.cuprin.1 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGU-UUUGGCUA-GG|-GGGUC(au T.cuprin.1 1550 ggc)GAGUUACCAAACCAAG-GCAAACUCCGAA-UA-|CCG-A-A-G--A T.cuprin.1 1600 GUGU---CA|GCA-CGGGAGACAGAC--ACC-GGGU(CGUAAC)GCUCGG T.cuprin.1 1650 -ACAC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- T.cuprin.1 1700 AAA-U-AUAG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUUU- T.cuprin.1 1750 GACAGUCAGGAAGUUGGC(UUAGAAGCA)GCCAU-CC-|U(UAA)A|GAA T.cuprin.1 1800 AGC(GUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA T.cuprin.1 1850 AGAU-GUAA-CGGGGCU-AAGCUAU-A|U|ACCGAAGCU|GCGG|augug T.cuprin.1 1900 c------(guaa-------------------------------------- T.cuprin.1 1950 -------------------------------------------------- T.cuprin.1 2000 -------------------------------------------------- T.cuprin.1 2050 -------------------------------------------------- T.cuprin.1 2100 -------------------------------------------------- T.cuprin.1 2150 -----------------------------------)----------cgu- T.cuprin.1 2200 GG-UAGAGGAG|cguucCGUU-CCG-UAA--------------------- T.cuprin.1 2250 -------------------------------------------------- T.cuprin.1 2300 --------------------------------G-CCUG-CGAGGGUG-U- T.cuprin.1 2350 U-CU(-GUAA-)GGA--AUGCUGG|AGGUAU-CGGAAGUUCGAAUCG-UG T.cuprin.1 2400 AC|AUG-AGUA--GCGUUAAAGGGGG(UGAAAGC)UCCCCU|CGCC-GUA T.cuprin.1 2450 AGUCCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGU-AGU| T.cuprin.1 2500 CGG|C-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGCUGAUGG-GAAAC T.cuprin.1 2550 AGG-(UU-AAUAUU)CACUGU|AC|ca-caug-ucu-agu---------- T.cuprin.1 2600 -------------------------------------------------- T.cuprin.1 2650 -------------------------------------------------- T.cuprin.1 2700 ------gcgau------gugg--gga-cggagaaaguua-gguu-a-|uc T.cuprin.1 2750 c-agg(ug--uuggau-gu---)cc-uggu-|ucaa-------------- T.cuprin.1 2800 ---gcag-guaggc-------gugccc-cuuagg(ca-aa-u-)cc|g-- T.cuprin.1 2850 gggggcua------------agcu-gagaugug-auga|cg--|------ T.cuprin.1 2900 ------agcgg(ggcuug-)ccgcu-----------gaag--uaacu-ga T.cuprin.1 2950 uacu-cug-|cuuccaagaaa-agccac-uaagcuuc---------ac-u T.cuprin.1 3000 -agac---gug|A|CCGUACCGCAAACC(GACACU)GG|UGC-GCGAGA- T.cuprin.1 3050 U-(GAGUA)UUCUCAGGCGC||UUGAGAGAACUCGGGAG----------- T.cuprin.1 3100 ----AAGGAACUCGGCAAAUUUGUACCGUAAC(-UUCG)GGAUAAGGUAC T.cuprin.1 3150 |GCCCCuagu-auguga----------cgcc(-guaca)ggcu------- T.cuprin.1 3200 ---gagcag-aaugggg-C|C(GAC)GUGAAAAGGUG-GCUG|CGACU-- T.cuprin.1 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G T.cuprin.1 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU T.cuprin.1 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU T.cuprin.1 3400 GAUCGAAGC-|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( T.cuprin.1 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA T.cuprin.1 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU T.cuprin.1 3550 |GAAAUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGA-AAGACGGAAAGA T.cuprin.1 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACAGAUC T.cuprin.1 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAG--CCGGGAU(GCUA)GUUCCGG T.cuprin.1 3700 UGGAGCCAAC-C-UUGAAAUACCACC|CUGG-UGUGUUUGAGG-UUCUAA T.cuprin.1 3750 -CCUUGG----UCCU(--ugaauc)-AGGACUGGG-GACAGUGCAUGGUG T.cuprin.1 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(UAA-AGCGUAAC)GGAGG T.cuprin.1 3850 A|G|U|UCGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| T.cuprin.1 3900 GU(G|C-AU-)GCAUA-GCGUGCUU-ACUGCGAGAC(UGACAC)GUGACG T.cuprin.1 3950 AAU--GC(GAAA)-C--GGA|CAUAGUGAUCCGa-gaa-caG(UAU-GA) T.cuprin.1 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|-AUAACAG|GC T.cuprin.1 4050 UGAagUACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGUuUUGGCAC T.cuprin.1 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU T.cuprin.1 4150 CCCAAGGGU|AUC-C(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG T.cuprin.1 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UUGU-CCCUAU-CU|UCCGUG T.cuprin.1 4250 G-G|CG-CUGGAAGCUU|GA-|GAGGGGC-UGC--------------UCC T.cuprin.1 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGCACCCCUGGUGUACCGGU|U T.cuprin.1 4350 GUCAC(GC-CA-)GUG-CA-UCGCCGGGUAGCU-AUGUGCGGAAGAGAUA T.cuprin.1 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACUCGCCUC|AAGAUUAGGCUUC T.cuprin.1 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUAAAAGG|-GU|CGUUG-(AAGA T.cuprin.1 4500 CG-A)CAACG-UUGAUAG|GCU-G|GUGUG-GAAGCGCA--(GUAA-)-- T.cuprin.1 4550 UGCGU|UG-AGCUA|A|C-AGUACUAAUU-GCCC-U-A-|GCUUGA-UC- T.cuprin.1 4600 --------|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.cuprin.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.cuprin.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ T.cuprin.1 4750 ~~~|||||| T.cuprin.2 0 -------------------------------------------------- T.cuprin.2 50 ----------------------------|---------GGUCAAGCGAC- T.cuprin.2 100 --UAAGUGCAUACGGUGGAUG|CCUUGG|CGACUAC|AG|GC-GACGAAG T.cuprin.2 150 GA|CGUG(GAAG-CC-)U|-GCG-UUAAGCUGCGGG|-GAGCU(G-GCAA T.cuprin.2 200 UCA-)AGCUUUG-AUC-CGUAGAUG|UCCGAAUGGG(GAAA)CCC|accc T.cuprin.2 250 ----(--------------------------------------------- T.cuprin.2 300 -------------------------------------------------- T.cuprin.2 350 -------------------------------------------------- T.cuprin.2 400 -------------------------------------------------- T.cuprin.2 450 ----gcaa)----gggu-AUUC-UUUGCU(GA-AUACA--UA)GGC-AAA T.cuprin.2 500 -g-a--agg-c-gaAC|CG-AGUGAACU|GA(AACA)UCUAAGUA-ACUC T.cuprin.2 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GAAAGUAGU(GGCGA)G T.cuprin.2 600 CGA-AAU-CGGa-CCA-GCCug-----------------------(---- T.cuprin.2 650 -)------------------------------------------------ T.cuprin.2 700 ----------------------------uacguuuuagcguagauauc-a T.cuprin.2 750 gggGAAu-cuc-u(u-ggaaa)a-gagagc|c(aca)guGGG(UGAUAGC T.cuprin.2 800 )CCCGU-ACCU-aaaaauauuug-cguggaacuaggcguac--------- T.cuprin.2 850 ---------------GACAAGUAGGGCGGGA(CACGUG-UAA)UCCUGUC T.cuprin.2 900 UGAACAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCGUA T.cuprin.2 950 GUCGACCGAUAGUG-AAC-AAGUACC(GUGA)-GGGA-AAGGUGAAAA-G T.cuprin.2 1000 AACCCC(GG-GA-)GGGGA--GUGAAA-UAGAUCCUGAAACCGU-AUGCA T.cuprin.2 1050 UACAA-A-AAGUCGGAGCCC------------------(----gcaa--) T.cuprin.2 1100 -----------------GGGUGACGGCGUACCU(UUU-GUAU|A)AUGG| T.cuprin.2 1150 -GUCAGCGACUUAC-AUUC-AGUGGC-AAGCUUAACC--(-GAAUA)--G T.cuprin.2 1200 G-GAAGGCGUAGG(GAAA-)CCGAGUCC(GAA-CA)GGGCGU-------- T.cuprin.2 1250 --------------------------u-caG-UCGCUGGGUGUA-GACCC T.cuprin.2 1300 GAAAC-CGG-AUGA-UCUAUCCAUGGC|CAGGAUGAAGGCUGGG(UAAC) T.cuprin.2 1350 AC-CAGCUGGAGGUCCGAACC-GACUAGU(-GUUGCAAA)AUUAG|CGG- T.cuprin.2 1400 AUGAG-CUGUGGAUAGGGGU(-GAAAG)GCUAAACAAAUCCGGAAAUAGC T.cuprin.2 1450 UGGUUCUCCUCGAAAACUAU(-UUAG)GUAGUGC|-CUCGUGUa----U| T.cuprin.2 1500 -CAC|CUUCGG|GGGUAG|AGC-ACUGU-UUUGGCUA-GG|-GGGUC(au T.cuprin.2 1550 ggc)GACUUACCAAACCAAG-GCAAACUCCGAA-UA-|CCG-A-A-G--A T.cuprin.2 1600 GUGU---CA|GCA-CGGGAGACAGUG-CACC-GGGU(GCUAAC)GUCCGG T.cuprin.2 1650 -ACAC-AAGAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCU- T.cuprin.2 1700 AAA-U-AUAG-C-UAA-GUG------GGAAACGAAGUG-GGAAGGCUUU- T.cuprin.2 1750 GACAGUCAGGAAGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA T.cuprin.2 1800 AG(CGUAAUA)GC|UCACUGAU-----CGAGU-CGU-CC--UGC|GCGGA T.cuprin.2 1850 AGAU-GUAA-CGGGGCU-AAGCUAU-A|U|ACCGAAGCU|GCGG|augug T.cuprin.2 1900 c------(guaa-------------------------------------- T.cuprin.2 1950 -------------------------------------------------- T.cuprin.2 2000 -------------------------------------------------- T.cuprin.2 2050 -------------------------------------------------- T.cuprin.2 2100 -------------------------------------------------- T.cuprin.2 2150 -----------------------------------)-------gcacau- T.cuprin.2 2200 GG-UAGAGGAG|-----CGUU-CCG-UAA--------------------- T.cuprin.2 2250 -------------------------------------------------- T.cuprin.2 2300 --------------------------------G-CCUG-CGAAGGUG-U- T.cuprin.2 2350 U-CU(-GUAA-)GGA--AUGCUGG|AGGUAU-CGGAAGUGCGAAUGC-UG T.cuprin.2 2400 AC|AUG-AGUA--GCGUUAAAGGGGG(UGAAAAG)CCCCCU|CGCC-GUA T.cuprin.2 2450 AGCGCAAGGUUUCCUA-CGCAACG-(UUCAU)CG|G-CGUAGGGUGAGU| T.cuprin.2 2500 CGG|C-CCCUAAGGCGAGGCA(GAAA)-U-GCGU-AGCUGAUGG-GAAAC T.cuprin.2 2550 AGG-(UU-AAUAUU)C-CUGU|AC|ca-c-ug-ucu-agu---------- T.cuprin.2 2600 -------------------------------------------------- T.cuprin.2 2650 -------------------------------------------------- T.cuprin.2 2700 ------gcgau------gugg--gga-cggagaaaguua-gguu-a-|uc T.cuprin.2 2750 c-agg(ug--uuggau-gu---)cc-uggu-|ucaa-------------- T.cuprin.2 2800 ---gcag-guaggc-------gugccc-cuuagg(ca-aa-u-)cc|g-- T.cuprin.2 2850 gggggcua------------agcu-gagaugug-auga|cga-|------ T.cuprin.2 2900 ------ggcgg(--cuug-)ccgcu-----------gaag--uaacu-ga T.cuprin.2 2950 uacu-cug-|cuuccaagaaa-agccac-uaagcuuca--------gc-u T.cuprin.2 3000 -agac---gug|A|CCGUACCGCAAACC(GACACU)GG|UGC-GCGAGA- T.cuprin.2 3050 U-(GAGUA)UUCUCAGGCGC||UUGAGAGAACUCGGGAG----------- T.cuprin.2 3100 ----AAGGAACUCGGCAAAUUUGUACCGUAAC(-UUCG)GGAUAAGGUAC T.cuprin.2 3150 |GCCCCuagu-auguga----------cgcc(-guaca)ggcu------- T.cuprin.2 3200 ---gagcag-aaugggg-C|C(GCA)GUGAAAAGGUG-GCUG|CGACU-- T.cuprin.2 3250 ---GU(UUAUUAAAA)ACACAGCACUCUG|CAAACAC(GAAA------)G T.cuprin.2 3300 UGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAGU T.cuprin.2 3350 GAUGGG----GU--------(G-CAA)-----------GC------UCUU T.cuprin.2 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( T.cuprin.2 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA T.cuprin.2 3500 AUGGCGUAACGA-UGGCCACACUGUCUCCUCCCGAGACUCA|GCGAAGUU T.cuprin.2 3550 |GAAAUGU-UUG(UGAUGAUG)CAAUCUCCCCGCGGA-AAGACGGAAAGA T.cuprin.2 3600 CCCCAUGA|ACCU-UUACUGU|AGCUUUGCAUU|GGACUUUGAACACAUC T.cuprin.2 3650 UGUGUAGGAUAGGUGGGAGGCUUUGAAG--CCGGGAU(GCUA)GUUCCGG T.cuprin.2 3700 UGGAGCCAAC-C-UUGAAAUACCACC|CUGG-UGUGUUUGAGG-UUCUAA T.cuprin.2 3750 -CCUUGG----UCCU(--ug-auc)-AGGACUGGG-GACAGUGCAUGGUG T.cuprin.2 3800 GG-CAGUUUGACUG(GGG)CGGUC|UCCUCC(UAA-AGCGUAAC)GGAGG T.cuprin.2 3850 A|G|U|UCGAAGGUACGC|UAGGUACGG(UCGGAAA)UCGUGCUGA-UA| T.cuprin.2 3900 GU(G|CAAUG)GCAUAAGCGUGCUUAACUGCGAGAC(UGACAA)GUCGAG T.cuprin.2 3950 CAGAUGC(GAAA)GC-AGGA|CAUAGUGAUCCGGUGGUUCUG(UAUGGA) T.cuprin.2 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACUC|UGGG|GAUAACAG|GC T.cuprin.2 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC T.cuprin.2 4100 CUCGAUGUC|GGCU|C|AUCUC|AUCC|UGGGGCU(GUAGC---C)-GGU T.cuprin.2 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGAGGUACG-UGAGCUGG T.cuprin.2 4200 GUUUA-AAAC|GUC(GUGA)-GACAGUU-UUGU-CCCUAU-CU|GCCGUG T.cuprin.2 4250 G-G|CG-CUGGAAGCUU|GA-|GAGGGGC-UGC--------------UCC T.cuprin.2 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGCACCCCUGGUGUACCGGU|U T.cuprin.2 4350 GUCAC(GC-CA-)GUGGCA-UCGCCGGGUAGCU-AUGUGCGGAAGAGAUA T.cuprin.2 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAACUCGCCUC|AAGAUUAGGCUUC T.cuprin.2 4450 C|CU|GGAGA-(cuuga-)-UCUCC-CUA-AAGG|-GU|CGUUG-(AAGA T.cuprin.2 4500 CG-A)CAACG-UUGAUAG|GCUGG|GUGUG-GAAGCGCA--(GUAA-)-- T.cuprin.2 4550 UGCGU|UG-AGCUA|A|cCAGUACUAAUU-GCCCGUGAG|GCUUGA-UCC T.cuprin.2 4600 U-------|aua-------------------------------------- T.cuprin.2 4650 -------------------------------------------------- T.cuprin.2 4700 -------------------------------------------------- T.cuprin.2 4750 ---|||||| M.bispor.1 0 -------------------------------------------------- M.bispor.1 50 ----------------------------|---------AGUCAAGUUAC- M.bispor.1 100 --UAAGGGCACACGGUGGAUG|CCUUGG|CACCAGG|AG|CC-GAUGAAG M.bispor.1 150 GA|CGUG(GGAG-CC-)U|-GCG-AUAAGCCUCGGG|-GAGCC(G-GCUA M.bispor.1 200 CCA-)GGCGUUG-AUC-CGGGGAUU|UCCGAAUGGG(GGAA)CCU|GGCC M.bispor.1 250 CGA-(--------------------------------------------- M.bispor.1 300 -------------------------------------------------- M.bispor.1 350 -------------------------------------------------- M.bispor.1 400 -------------------------------------------------- M.bispor.1 450 --guugug)-UCGGGUC-GCCG-CCGUCU(GA-ACGCA--UA)GGA-CGG M.bispor.1 500 -UUG--GUG-G-GAAC|GC-GGGGAAGU|GA(AACA)UCUCAGUA-CCCG M.bispor.1 550 CAGGAAGAGAAAGC(-AAUC--)GCGAU|UCC-CUGAGUAGU(GGUGA)G M.bispor.1 600 CGA-AAG-GGGA-AGA-GGCUAAACCGGUG-GCGUGUUAAAGCC-(GGCA M.bispor.1 650 -)---GGGC-UUGCGUUACCGGGGUUGUGGGACGCUCCUU-----UGCA- M.bispor.1 700 GUCUC(-UGCC-)GGGGCUGC---gggcagugagaaaucggug-ggau-a M.bispor.1 750 gccGAAc-gcu-c(u-ggaau)g-ggcggc|c(gua)gaCCG(UGAGAGC M.bispor.1 800 )CGGGU-Aggc-gaaaucuugcc-ga-cugccu----------------- M.bispor.1 850 ---ggggguguuccc---gaguaGCACGGGG(CCCGAG-GAA)UCCUGUG M.bispor.1 900 CGAAUCU-GCC-AG(GACCAC)CU-GGU-AAGCCUAA----AUACUCCCU M.bispor.1 950 GGUGACCGAUAGUG-GAC-GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G M.bispor.1 1000 CGCCCC(GGUGA-)GGGGUU-GUGAAA-UAGUACCUGAAACCGU-GUGCC M.bispor.1 1050 UACAA-G-CCGUGGGAGCUUggca-gcgccc-------(----uuug--) M.bispor.1 1100 ---gguguugucg-UG-AUGUGACCGCGUGCCU(UUU-GAAG|A)AUGA| M.bispor.1 1150 -GCCUGCGAGUUGA-CGUG-CGUGGC-GAGGUUAACCC-(--GUGU)-GG M.bispor.1 1200 G-GGAGCCGUAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- M.bispor.1 1250 --------------------------u-gaG-UCGCGUGCGUCAAGACCC M.bispor.1 1300 GAAGC-CGG-GUGA-UCUACCCGUGGG|CAGGGUGAAGCUCAGG(UAAG) M.bispor.1 1350 AC-UGGGUGGAGGCCCGAACC-CACCAGG(-GUUGCAAA)CCUGG|GGG- M.bispor.1 1400 AUGAC-CUGCGGGUAGCGGU(-GAAAA)GCCAAUCGAACUCGGUGAUAGC M.bispor.1 1450 UGGUUCUCCCCGAAAUGCAU(-UUAG)GUGCAGC|-GUCACGUGG---U| M.bispor.1 1500 -CCU|UGCC-G|AGGUAG|AGC-ACUGG-UUGGCCGA-UG|-GGCCC(Uc M.bispor.1 1550 ac-)agGUUACUGAGGUCAG-CCAAACUCCGAA-UG-|CCG-G-U-A--- M.bispor.1 1600 AGUG--UGA|GCG-UGGCAGUGAGAC--CGC-GGGG(GAUAAG)CUUCGU M.bispor.1 1650 -GGUC-GAGAGGG(-AAACAG-)CCCAGAUCACCGGCUAAG-GC|CCCG- M.bispor.1 1700 AAGCG-UGUG-C-UGA-GUG------GGAAAGGAUGUG-AAGCCGCUGU- M.bispor.1 1750 GACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|C(UAA)G|GAG M.bispor.1 1800 UGC(GUAAUA)GC|UCACUGGU-----CUAGU-GGU-UU--UGC|GCCGA M.bispor.1 1850 CAAU-GUAG-CGGGGCUCAAGCACA-C|C|GCCGAAGCC|GUGG|cgucu M.bispor.1 1900 uccg---(cgugug------------------------------------ M.bispor.1 1950 -------------------------------------------------- M.bispor.1 2000 -------------------------------------------------- M.bispor.1 2050 -------------------------------------------------- M.bispor.1 2100 -------------------------------------------------- M.bispor.1 2150 -----------------------------------)----cgggggacg- M.bispor.1 2200 GG-UAGGGGAG|-----CGUC-GUG-CG---------------------- M.bispor.1 2250 -------------------------------------------------- M.bispor.1 2300 --------------------------------G-CGGG-UGAAGCGG-C- M.bispor.1 2350 G-GG(-GUGA-)CCC-AGCCGUGG|ACGCCG-UGCGAGUGAGAAUGC-AG M.bispor.1 2400 GC|AUG-AGUA--GCGUU-UCAGAAG(UGAGAAA)CUUCUG|CGCC-GGA M.bispor.1 2450 UGACCAAGGGUUCCUG-GGGCAGG-(UUGAU)CC|G-CCCAGGGUAAGU| M.bispor.1 2500 CGG|G-ACCUAAGGCGAGGCC(GAUA)-G-GCGU-AGUCGAUGG-GCAAC M.bispor.1 2550 GGG-(UU-GAUAUU)C-CCGU|AC|cc-g-cc-gug-gcgc--------- M.bispor.1 2600 ----------------------------gu-----ucug------ccgc( M.bispor.1 2650 uuc-g)gugg-----------------cagg------------------- M.bispor.1 2700 ---uaagcgau------gggg--gga-cgcaggaaggua-gccc-au|cc M.bispor.1 2750 c-agg(cg--gugguu-gu---)cc-uggg-|guaa-------------- M.bispor.1 2800 ---gcau-guaggg-------ug-cgg-gguagg(ca-aa-u-)cc|g-- M.bispor.1 2850 ccccg-uguua--------agccc-gagaugcg-augc|cga-|------ M.bispor.1 2900 -------gccg(-auug--)uggc------------gaag--ugggu-ga M.bispor.1 2950 uccu-cua-|cugccgagaaa-agccuc-ua-gcga----------gc-g M.bispor.1 3000 cuaugg--cgg|C|CCGUACCCUAAACC(GACUCU)GG|UGG-UCAGGU- M.bispor.1 3050 A-(GAGAA)UACCGAGGCGU||UCGGGCGAACCGCGGUU----------- M.bispor.1 3100 ----AAGGAACUAGGCAAAUUGCCCCCGUAAC(-UUCG)GGAGAAGGGGG M.bispor.1 3150 |GCCUCUGCU-GGUGUA----------ggca(-cgugc)ugccga----- M.bispor.1 3200 ---agcugg--uggggg-C|C(GCA)GAGAAUAGGCC-CAGG|CGACU-- M.bispor.1 3250 ---GU(UUACUAAAA)ACACAGGUCCGUG|CGAAGUC(GUAA------)G M.bispor.1 3300 ACGAAGU-AUACGGACUGA-CGCCUGCCCGGU|GCCG-GAA-CGUUAAGG M.bispor.1 3350 GGACGGGUUAGCGGC-CU--(U-UCG)-GGGUU-----GCGA-AGCUCGG M.bispor.1 3400 AACCUAAGCG|CCGGUAAAC|-GGC|GGUGGU(AACUAUA)ACCAUC|C( M.bispor.1 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA M.bispor.1 3500 AUGGCGUAACGG-UCUGGGCACUGUCUCAACCGCGGACCCG|GCGAAAUU M.bispor.1 3550 |GCACUAC-GAG(UAAAGAUG)CUCGUUACGCGCAGC-AGGACGGAAAGA M.bispor.1 3600 CCCCG-GG|ACCU-UCACUGC|AGCUUGGCAUU|GGCGUUUGGAAUGGCU M.bispor.1 3650 UGUGUAGGAUAGGCGGGAGACUGUGAAG--CGGGCAC(GCCA)GUGUCCG M.bispor.1 3700 UGGAGUCGCC-G-UUGAAAUACCACU|CUGG-CUGUUUCGGAC-GUCUAA M.bispor.1 3750 -CCCGGG----UCCC(--UU-AUC)-GGGAUCGGG-GACAGUGCCUGGUG M.bispor.1 3800 GG-UAGUUUGACUG(GGG)CGGUU|GCCUCC(UAA-AGGGUAAC)GGAGG M.bispor.1 3850 C|G|C|CCAAAGGUCCCC|UCAGCCUGG(UUGGAAA)UCAGGCGUU-GA| M.bispor.1 3900 GU(G|UAAGG)GCACAAGGGGGCUUAACUGUGAGAC(CGACGG)GUCGAG M.bispor.1 3950 CAGAUGC(GAAA)GC-AGGG|CCUAGUGAUCCGGCGGUGGCG(AGUGGA) M.bispor.1 4000 AGC|GCCGUCGCUCAAC|GGCUAAAAGGUACCC|CGGG|GAUAACAG|GC M.bispor.1 4050 UGA--UCAUCCCCAAGA(G-UCC-AUA)UCGACGGGA-UGGU-UUGGCAC M.bispor.1 4100 CUCGAUGUC|GGCU|C|GUCGC|AUCC|UGGGGCU(GGAGU---A)-GGU M.bispor.1 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGCGGUACG-CGAGCUGG M.bispor.1 4200 GUUUA-GAAC|GUC(GCGA)-GACAGUU-CGGU-CCCUAU-CC|GCUGCG M.bispor.1 4250 C-G|CG-UAGGAGACUU|GA-|GGGGGGC-UGU--------------UCC M.bispor.1 4300 (UAGUAC(GAGA)GGACC)GGAACGG|ACGAACCUCUGGUGUGCCAGU|U M.bispor.1 4350 GUGCC(GC-CA-)GGUGCA-CGGCUGGUUGGCU-ACGUUCGGUUGGGAUA M.bispor.1 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCCCGCCCC|GAGAUGAGGUCUC M.bispor.1 4450 C|CU|CCGG--(GUUAA-)--CCGG--GU-AAGG|-CU|CCCAG-(UAGA M.bispor.1 4500 UG-A)CUGGG-UUGAUAG|GCCGG|UGGUG-GAAGCGCG--(GUAA-)-- M.bispor.1 4550 CGUGU|GG-AGCCG|A|CCGGUACUAAUA-AGCCGAGAG|GCUUGA-CUU M.bispor.1 4600 CA~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.bispor.1 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.bispor.1 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.bispor.1 4750 ~~~|||||| M.bispor.2 0 -------------------------------------------------- M.bispor.2 50 ----------------------------|---------AGUCAAGUUAC- M.bispor.2 100 --UAAGGGCACACGGUGGAUG|CCUUGG|CACCAGG|AG|CC-GAUGAAG M.bispor.2 150 GA|CGUG(GGAG-CC-)U|-GCG-AUAAGCCUCGGG|-GAGCC(G-GCUA M.bispor.2 200 CCA-)GGCGUUG-AUC-CGGGGAUU|UCCGAAUGGG(GGAA)CCU|GGCC M.bispor.2 250 CGA-(--------------------------------------------- M.bispor.2 300 -------------------------------------------------- M.bispor.2 350 -------------------------------------------------- M.bispor.2 400 -------------------------------------------------- M.bispor.2 450 --guugug)-UCGGGUC-GCCG-CCGUCU(GA-ACGCA--UA)GGA-CGG M.bispor.2 500 -UUG--GUG-G-GAAC|GC-GGGGAAGU|GA(AACA)UCUCAGUA-CCCG M.bispor.2 550 CAGGAAGAGAAAGC(-AAUC--)GCGAU|UCC-CUGAGUAGU(GGUGA)G M.bispor.2 600 CGA-AAG-GGGA-AGA-GGCUAAACCGGUG-GCGUGUUAAAGCC-(GGCA M.bispor.2 650 -)---GGGC-UUGCGUUACCGGGGUUGUGGGACGCUCCUU-----UGCA- M.bispor.2 700 GUCUC(-UGCC-)GGGGCUGC---gggcagugagaaaucggug-ggau-a M.bispor.2 750 gccGAAc-gcu-c(u-ggaau)g-ggcggc|c(gua)gaCCG(UGAGAGC M.bispor.2 800 )CGGGU-Aggc-gaaaucuugcc-ga-cugccu----------------- M.bispor.2 850 ---ggggguguuccc---gaguaGCACGGGG(CCCGAG-GAA)UCCUGUG M.bispor.2 900 CGAAUCU-GCC-AG(GACCAC)CU-GGU-AAGCCUAA----AUACUCCCU M.bispor.2 950 GGUGACCGAUAGUG-GAC-GAGUACC(GUGA)-GGGA-AAGGUGAAAA-G M.bispor.2 1000 CGCCCC(GGUGA-)GGGGUU-GUGAAA-UAGUACCUGAAACCGU-GUGCC M.bispor.2 1050 UACAA-G-CCGUGGGAGCUUggca-gcgccc-------(----uuug--) M.bispor.2 1100 ---gguguugucg-UG-AUGUGACCGCGUGCCU(UUU-GAAG|A)AUGA| M.bispor.2 1150 -GCCUGCGAGUUGA-CGUG-CGUGGC-GAGGUUAACCC-(--GUGU)-GG M.bispor.2 1200 G-GGAGCCGUAGC(GAAA-)GCGAGUCU(GAA-UA)GGGCGU-------- M.bispor.2 1250 --------------------------u-gaG-UCGCGUGCGUCAAGACCC M.bispor.2 1300 GAAGC-CGG-GUGA-UCUACCCGUGGG|CAGGGUGAAGCUCAGG(UAAG) M.bispor.2 1350 AC-UGGGUGGAGGCCCGAACC-CACCAGG(-GUUGCAAA)CCUGG|GGG- M.bispor.2 1400 AUGAC-CUGCGGGUAGCGGU(-GAAAA)GCCAAUCGAACUCGGUGAUAGC M.bispor.2 1450 UGGUUCUCCCCGAAAUGCAU(-UUAG)GUGCAGC|-GUCACGUGG---U| M.bispor.2 1500 -CCU|UGCC-G|AGGUAG|AGC-ACUGG-UUGGCCGA-UG|-GGCCC(Uc M.bispor.2 1550 ac-)agGUUACUGAGGUCAG-CCAAACUCCGAA-UG-|CCG-G-U-A--- M.bispor.2 1600 AGUG--UGA|GCG-UGGCAGUGAGAC--CGC-GGGG(GAUAAG)CUUCGU M.bispor.2 1650 -GGUC-GAGAGGG(-AAACAG-)CCCAGAUCACCGGCUAAG-GC|CCCG- M.bispor.2 1700 AAGCG-UGUG-C-UGA-GUG------GGAAAGGAUGUG-AAGCCGCUGU- M.bispor.2 1750 GACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|C(UAA)G|GAG M.bispor.2 1800 UGC(GUAAUA)GC|UCACUGGU-----CUAGU-GGU-UU--UGC|GCCGA M.bispor.2 1850 CAAU-GUAG-CGGGGCUCAAGCACA-C|C|GCCGAAGCC|GUGG|cgucu M.bispor.2 1900 uccg---(cgugug------------------------------------ M.bispor.2 1950 -------------------------------------------------- M.bispor.2 2000 -------------------------------------------------- M.bispor.2 2050 -------------------------------------------------- M.bispor.2 2100 -------------------------------------------------- M.bispor.2 2150 -----------------------------------)----cgggggacg- M.bispor.2 2200 GG-UAGGGGAG|-----CGUC-GUG-CG---------------------- M.bispor.2 2250 -------------------------------------------------- M.bispor.2 2300 --------------------------------G-CGGG-UGAAGCGG-C- M.bispor.2 2350 G-GG(-GUGA-)CCC-AGCCGUGG|ACGCCG-UGCGAGUGAGAAUGC-AG M.bispor.2 2400 GC|AUG-AGUA--GCGUU-UCAGAAG(UGAGAAA)CUUCUG|CGCC-GGA M.bispor.2 2450 UGACCAAGGGUUCCUG-GGGCAGG-(UUGAU)CC|G-CCCAGGGUAAGU| M.bispor.2 2500 CGG|G-ACCUAAGGCGAGGCC(GAUA)-G-GCGU-AGUCGAUGG-GCAAC M.bispor.2 2550 GGG-(UU-GAUAUU)C-CCGU|AC|cc-g-cc-gug-gcgc--------- M.bispor.2 2600 ----------------------------gu-----ucug------ccgc( M.bispor.2 2650 uuc-g)gugg-----------------cagg------------------- M.bispor.2 2700 ---uaagcgau------gggg--gga-cgcaggaaggua-gccc-au|cc M.bispor.2 2750 c-agg(cg--gugguu-gu---)cc-uggg-|guaa-------------- M.bispor.2 2800 ---gcau-guaggg-------ug-cgg-gguagg(ca-aa-u-)cc|g-- M.bispor.2 2850 ccccg-uguua--------agccc-gagaugcg-augc|cga-|------ M.bispor.2 2900 -------gccg(-auug--)uggc------------gaag--ugggu-ga M.bispor.2 2950 uccu-cua-|cugccgagaaa-agccuc-ua-gcga----------gc-g M.bispor.2 3000 cuaugg--cgg|C|CCGUACCCUAAACC(GACUCU)GG|UGG-UCAGGU- M.bispor.2 3050 A-(GAGAA)UACCGAGGCGU||UCGGGCGAACCGCGGUU----------- M.bispor.2 3100 ----AAGGAACUAGGCAAAUUGCCCCCGUAAC(-UUCG)GGAGAAGGGGG M.bispor.2 3150 |GCCUCUGCU-GGUGUA----------ggca(-cgugc)ugccga----- M.bispor.2 3200 ---agcugg--uggggg-C|C(GCA)GAGAAUAGGCC-CAGG|CGACU-- M.bispor.2 3250 ---GU(UUACUAAAA)ACACAGGUCCGUG|CGAAGUC(GUAA------)G M.bispor.2 3300 ACGAAGU-AUACGGACUGA-CGCCUGCCCGGU|GCCG-GAA-CGUUAAGG M.bispor.2 3350 GGACGGGUUAGCGGC-CU--(U-UCG)-GGGUU-----GCGA-AGCUCGG M.bispor.2 3400 AACCUAAGCG|CCGGUAAAC|-GGC|GGUGGU(AACUAUA)ACCAUC|C( M.bispor.2 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA M.bispor.2 3500 AUGGCGUAACGG-UCUGGGCACUGUCUCAACCGCGGACCCG|GCGAAAUU M.bispor.2 3550 |GCACUAC-GAG(UAAAGAUG)CUCGUUACGCGCAGC-AGGACGGAAAGA M.bispor.2 3600 CCCCG-GG|ACCU-UCACUGC|AGCUUGGCAUU|GGCGUUUGGAAUGGCU M.bispor.2 3650 UGUGUAGGAUAGGCGGGAGACUGUGAAG--CGGGCAC(GCCA)GUGUCCG M.bispor.2 3700 UGGAGUCGCC-G-UUGAAAUACCACU|CUGG-CUGUUUCGGAC-GUCUAA M.bispor.2 3750 -CCCGGG----UCCC(--UU-AUC)-GGGAUCGGG-GACAGUGCCUGGUG M.bispor.2 3800 GG-UAGUUUGACUG(GGG)CGGUU|GCCUCC(UAA-AGGGUAAC)GGAGG M.bispor.2 3850 C|G|C|CCAAAGGUCCCC|UCAGCCUGG(UUGGAAA)UCAGGCGUU-GA| M.bispor.2 3900 GU(G|UAAGG)GCACAAGGGGGCUUAACUGUGAGAC(CGACGG)GUCGAG M.bispor.2 3950 CAGAUGC(GAAA)GC-AGGG|CCUAGUGAUCCGGCGGUGGCG(AGUGGA) M.bispor.2 4000 AGC|GCCGUCGCUCAAC|GGCUAAAAGGUACCC|CGGG|GAUAACAG|GC M.bispor.2 4050 UGA--UCAUCCCCAAGA(G-UCC-AUA)UCGACGGGA-UGGU-UUGGCAC M.bispor.2 4100 CUCGAUGUC|GGCU|C|GUCGC|AUCC|UGGGGCU(GGAGU---A)-GGU M.bispor.2 4150 CCCAAGGGU|UGGGC(UGUUC)GC-CCAUUAAAGCGGUACG-CGAGCUGG M.bispor.2 4200 GUUUA-GAAC|GUC(GCGA)-GACAGUU-CGGU-CCCUAU-CC|GCUGCG M.bispor.2 4250 C-G|CG-UAGGAGACUU|GA-|GGGGGGC-UGU--------------UCC M.bispor.2 4300 (UAGUAC(GAGA)GGACC)GGAACGG|ACGAACCUCUGGUGUGCCAGU|U M.bispor.2 4350 GUGCC(GC-CA-)GGUGCA-CGGCUGGUUGGCU-ACGUUCGGUUGGGAUA M.bispor.2 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCCCGCCCC|GAGAUGAGGUCUC M.bispor.2 4450 C|CU|CCGG--(GUUAA-)--CCGG--GU-AAGG|-CU|CCCAG-(UAGA M.bispor.2 4500 UG-A)CUGGG-UUGAUAG|GCCGG|UGGUG-GAAGCGCG--(GUAA-)-- M.bispor.2 4550 CGUGU|GG-AGCCG|A|CCGGUACUAAUA-AGCCGAGAG|GCUU~~~~~~ M.bispor.2 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.bispor.2 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.bispor.2 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ M.bispor.2 4750 ~~~|||||| PURPLE.GAM 0 -x~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 50 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 100 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~|~~~~~~~|~~|~~~~~~~~~~ PURPLE.GAM 150 ~~|~~~~(~~~~~~~-)~|-~~~~~~~~~~~~~~~~|-~~~~~(~-~~~~ PURPLE.GAM 200 ~~~~)~~~~~~~~~~~-~~~~~~~~|~~~~~~~~~~(~~~~)~~~|~~~~ PURPLE.GAM 250 ~~~~(~~~~~~~~~~~~~~~~~~~~~------------------------ PURPLE.GAM 300 ----~~~~~~~~~~~~~~~~~~~~~~------------------------ PURPLE.GAM 350 -------------------------------------------------- PURPLE.GAM 400 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~~~~~~~)~~~~~~~ PURPLE.GAM 500 ~~~~~~~~~-~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ PURPLE.GAM 550 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~|~~~-~~~~~~~~~~~~~~~~~ PURPLE.GAM 600 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 650 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 700 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 750 ~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~|~(~~~)~~~~~~~~~~~~~ PURPLE.GAM 800 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~(~~~~~~-~~~)~~~~~~~ PURPLE.GAM 900 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~ PURPLE.GAM 950 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PURPLE.GAM 1000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 1050 ~~~~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 1100 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~(~~~-~~~~|~)~~~~| PURPLE.GAM 1150 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 1200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PURPLE.GAM 1250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~-~~~~~ PURPLE.GAM 1300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 1350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~|~~~~ PURPLE.GAM 1400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 1450 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~|-~~~~~~~~~~~~~| PURPLE.GAM 1500 -~~~~~~~~~~~~~~~~~|~~~~~~~~~-~~~~~~~~~~~|-~~~~~~~~ PURPLE.GAM 1550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ PURPLE.GAM 1600 ~~~~-~~~~|~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 1650 ~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~|~~~~~ PURPLE.GAM 1700 ~~~~~~~~~~~~-~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~- PURPLE.GAM 1750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~(~~~)~|~~~ PURPLE.GAM 1800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~--~~~|~~~~~ PURPLE.GAM 1850 ~~~~-~~~~~~~~~~~~~~~~~~~~-~|~~~~~~~~~~~|~~~~~~~~~~ PURPLE.GAM 1900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 1950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2000 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- PURPLE.GAM 2200 ~~~~~~~~~~~|-----~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- PURPLE.GAM 2350 ~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ PURPLE.GAM 2400 ~~|~~~-~~~~-~~~~~~~~~~~~~~(~~~~~~~)~~~~~~~~~~~~~~~ PURPLE.GAM 2450 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~| PURPLE.GAM 2500 ~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ PURPLE.GAM 2550 ~~~~~~~-~~~~~~~~-~~~~~~~|~~~~-~~-~~~-~~~~~~~~~~~~~ PURPLE.GAM 2600 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 2700 ~~~~~~~~~~~------~~~~--~~~-~~~~~~~~~~~~-~~~~-~~~~~ PURPLE.GAM 2750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- PURPLE.GAM 2800 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~ PURPLE.GAM 2850 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~ PURPLE.GAM 2900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ PURPLE.GAM 2950 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3000 ~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- PURPLE.GAM 3050 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ PURPLE.GAM 3200 ~~~~~~~~~-~~~~~~~~~|~(~~~)~~~~~~~~~~~~~~~~|~~~~~-- PURPLE.GAM 3250 --~~~(~~~~~~~~~)~~~~~~~~~~~~~|~~~~~~~~~~~~---~~~~~ PURPLE.GAM 3300 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~ PURPLE.GAM 3350 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~|~( PURPLE.GAM 3450 ~~~)~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~ PURPLE.GAM 3500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~ PURPLE.GAM 3550 ~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ PURPLE.GAM 3600 ~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3700 ~~~~~~~~~~~~~~-~~~~~~~~~~~|~~~~~~-~~~~~~~~~~~-~~~~ PURPLE.GAM 3750 ~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~ PURPLE.GAM 3800 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3850 ~~~|~|~|~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~-~~~ PURPLE.GAM 3900 ~|~~(~|~~~~~)~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 3950 ~~~~~~~~~~~~~~~~~-~~~~|~~~~~~~~~~~~~~~~~~~(~~~~~~) PURPLE.GAM 4000 ~~~~~|~~~~~~~~~~~~~|~~~~~~~~~~~~~~~|~~~~|~~~~~~|~~ PURPLE.GAM 4050 ~~~~~~~~~~~~~~~~~(~~~~~~~~~)~~~~~~~~~~~~~~-~~~~~~~ PURPLE.GAM 4100 ~~~~~~~~~|~~~~|~~~~~~~~~~~~|~~~~~(~~~~~~~~~--)-~-~ PURPLE.GAM 4150 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 4200 ~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~|~~~~~~ PURPLE.GAM 4250 ~~~|~~~~~~~~~~~~~|~~-|~~~~~~~~~~~--------------~~~ PURPLE.GAM 4300 ~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 4350 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ PURPLE.GAM 4400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~~~~ PURPLE.GAM 4450 ~|~~|~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~|~~~~~-~~~~~ PURPLE.GAM 4500 ~~-~~~~~~~~~~~~~~~|~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 4550 ~~~~~|~~~~~~~~|~|~~~~~~~~~~~~~~~~~~~~~~|~~~~~~~~~~ PURPLE.GAM 4600 ~~~~~~~~|~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 4650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 4700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ PURPLE.GAM 4750 ~~~|||||| L.mucor 0 -------------------------------------------------- L.mucor 50 ----------------------------|---------AAUCAAGUGAC- L.mucor 100 --UAAGCGUAUGUGGUGGAUG|CCUAGG|CGAUAAG|AG|GC-GAUGAAG L.mucor 150 GA|CGUA(GUAA-UC-)U|-GCG-AAAAGCCCCGGU|-GAGCU(G-AUAA L.mucor 200 ACA-)AGCUGUG-ACC-CGAGGAUG|UCCGAAUGGG(GAAA)CCC|ggca L.mucor 250 c-u-(--------------------------------------------- L.mucor 300 -------------------------------------------------- L.mucor 350 -------------------------------------------------- L.mucor 400 -------------------------------------------------- L.mucor 450 ----auaa)-g-guguc-AUCG-UAAUCU(GA-AUACA--UA)GGA-UUA L.mucor 500 -C-G--AAG-C-UAAC|CC-GGAGAACU|GA(AACA)UCUAAGUA-CCCG L.mucor 550 GAGGAACAGAAAUC(-AACC--)GAGAU|UCC-CUUAGUAGC(GGCGA)G L.mucor 600 CGA-ACG-GGGA-CCA-GCCC------------------------(---- L.mucor 650 -)------------------------------------------------ L.mucor 700 ---------------------------uuaa---gcggcuuuaaugau-a L.mucor 750 agaGAAc-acg-u(u-gggaa)g-cgugac|c(aga)guGGG(UGAUAGU L.mucor 800 )CCCGU-Aucu-gaaaucauuuu-agucgu-----gaa------------ L.mucor 850 ---------------AACGAGUAGGUCGGGA(CACGUG-AUA)UCCUGAU L.mucor 900 UGAACAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCCUU L.mucor 950 AUCGACCGAUAGUG-AAC-CAGUACC(GUGA)-GGGA-AAGGCGAAAA-G L.mucor 1000 AACCCC(GGAGA-)GGGGA--GUGAAA-UAGAACCUGAAACCGC-AUACG L.mucor 1050 UACAA-G-CAGUGGGAGCCU--GA-A------------(----uuua--) L.mucor 1100 -------------UUC-GGGUGACUGCGUACCU(UUU-GUAU|A)AUGG| L.mucor 1150 -GUCAGCGACUUAC-UCAU-CGUGGC-AAGCUUAAGC--(-GUAUA)--G L.mucor 1200 C-GUAGGCGUAGG(GAAA-)CCGAGUCU(UAA-UA)GGGCGA-------- L.mucor 1250 --------------------------c-aaG-UCGCGGUCAGUA-GACCC L.mucor 1300 GAAAC-CGA-GCGA-UCUAUCCAUGGC|CAGGUUGAAGGUGGGG(UAAC) L.mucor 1350 AC-CUACUGGAGGACCGAACC-CACGUAU(-GUUGAAAA)AUGCG|GGG- L.mucor 1400 AUGAG-CUGUGGAUCGGAGU(-GAAAG)GCUAAUCAAGCUCGGAGAUAGC L.mucor 1450 UGGUUCUCCUCGAAAUCUAU(-UUAG)GUAGAGC|-CUCAUGUA----U| L.mucor 1500 -UAC|UCACGG|GGGUAG|AGC-ACUGU-UAUGGCUAGGG|-GGGCc(ug L.mucor 1550 aCC)GCCUUACCAACCCAUU-GCAAACUCCGAA-UA-|CCG-U-G-A--A L.mucor 1600 GUA---GCA|GCA-UGGGAGUCACAC--GGC-GGGU(GCUAAC)GUCCGU L.mucor 1650 -CGUG-GAAAGGG(-AAACAA-)CCCAGACCGCCAGCUAAG-GU|CCCA- L.mucor 1700 AAAUU-ACAG-C-UCA-GUG------GGAAACGAUGUG-GGAAGGCACA- L.mucor 1750 GACAGCCAGGAGGUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA L.mucor 1800 AGC(GUAAUA)GC|UCACUGGU-----CGAGU-CGG-CC--UGC|GCGGA L.mucor 1850 AGAU-UUAA-CGGGGCUCAAGCUGU-A|U|ACCGAAGCU|GCGG|aaucg L.mucor 1900 ga-----(uuua-------------------------------------- L.mucor 1950 -------------------------------------------------- L.mucor 2000 -------------------------------------------------- L.mucor 2050 -------------------------------------------------- L.mucor 2100 -------------------------------------------------- L.mucor 2150 -----------------------------------)------uccgauu- L.mucor 2200 GG-UAGAGGAG|-----CGUU-CUG-UAA--------------------- L.mucor 2250 -------------------------------------------------- L.mucor 2300 --------------------------------G-CCAA-UGAAGGUG-A- L.mucor 2350 A-uc(-GUAA-)GGU--UUGCUGG|AGGUAU-CAGAAGUGCGAAUGC-UG L.mucor 2400 AC|AUA-AGUA--ACGAUAAGACGGG(UGAAAAA)CCCGUC|CGCC-GAA L.mucor 2450 AAUCCAAGGUUUCCUG-CGCAACG-(UUAAU)CG|G-CGCAGGGUUAGU| L.mucor 2500 CGG|C-CCCUAAGGCGAGGCA(GAGA)-U-GCGU-AGUCGAUGG-GAAAC L.mucor 2550 AGG-(UU-AAUAUU)C-CUGU|AC|cg-c-ua-aua-agu---------- L.mucor 2600 -------------------------------------------------- L.mucor 2650 -------------------------------------------------- L.mucor 2700 ------gcgau------gggg--uga-cggagaaggcua-ggcu---|ag L.mucor 2750 a-aca(ca--guug-g-ug---)ug-uauc-|-uaa-------------- L.mucor 2800 ---gcgu-uuaggc-------agagaa-cuuagg(ca-aa-u-)cc|g-- L.mucor 2850 gguucuuaa-----------ugcu-gaggcgug-augg|cga-|------ L.mucor 2900 -----cgguuc(-uacg--)gaacugga--------guag-----uc-ga L.mucor 2950 ugcc-aug-|cuuccaggaaa-aaccuc-uaagcuuca--------gc-u L.mucor 3000 -uauua--gug|A|CCGUACUCUAAACG(GACACA)CG|UGG-AUAGGA- L.mucor 3050 U-(GAGAA)UUCCAAGGCGC||UUGAGAGAACUCUGGUG----------- L.mucor 3100 ----AAGGAACUAGGCAAAAUAGCACCGUAAC(-UUCG)GGAGAAGGUGC L.mucor 3150 |GCCCCU----gacgguu-----------ca(-uagc-)ug--------- L.mucor 3200 -----uu-----ggggg-C|C(GCA)GAGACCAGGUG-GCUG|CGACU-- L.mucor 3250 ---GU(UUAUCAAAA)ACACAGCACUCUG|CUAACGC(GAAA------)G L.mucor 3300 CGGACGU-AUAGGGUGUGA-CGCCUGCCCGGU|GCCG-GAA-GGUUAAUU L.mucor 3350 GAUGGGGUUAGC--------(U-UCG)-----------GCGA-AGCUCUU L.mucor 3400 GAUCGAAGCC|CCGGUAAAC|-GGC|GGCCGU(AACUAUA)ACGGUC|C( L.mucor 3450 UAA)GGUAGCG-AAAUUCCUU|GUCGGG(UAAGU)UCCGAC|CUGCACGA L.mucor 3500 AUGGCGUAACGA-CGGCCACACUGUCUCCACCAGAGGCUCA|GUGAAAUU L.mucor 3550 |GAAAUCG-CAG(UUAAGAUG)CUGCGUACCCGCGGC-UAGACGGAAAGA L.mucor 3600 CCCCGUGC|ACCU-UUACUAC|AGCUUUGCACU|GAACAUCGGGCCUACU L.mucor 3650 UGUGUAGGAUAGCUGGGAGGCUUUGAAA--CCGGGAC(GCUA)GUUCCGG L.mucor 3700 UGGAGCCAAU-C-UUGAAAUACCAGC|CUGG-UAGUUCUGAUG-UUCUAA L.mucor 3750 -CCACGG----CCCC(--UG-AUC)-GGGGUUUGG-GACAGUGUAUGGUG L.mucor 3800 GG-UAGUUUGACUG(GGG)CGGUC|UCCUCC(UAA-AGCGUAAC)GGAGG L.mucor 3850 A|G|C|GCGAAGGUUCAC|UAAUCAUGG(UCGGAAA)UCAUGAGGU-UU| L.mucor 3900 GU(G|CAAAG)GCAUAAGUGAGCUUGACUGCGAGAC(AGACAC)GUCGAG L.mucor 3950 CAGGUAC(GAAA)GU-AGGU|CUUAGUGAUCCGGUGGUUCUG(UAUGGA) L.mucor 4000 AGG|GCCAUCGCUCAAC|GGAUAAAAGGUACGC|CGGG|GAUAACAG|GC L.mucor 4050 UGA--UACCGCCCAAGA(G-UUC-AUA)UCGACGGCG-GUGU-UUGGCAC L.mucor 4100 CUCGAUGUC|GGCU|C|AUCAC|AUCC|UGGGGCU(GAAGC---G)-GGU L.mucor 4150 CCCAAGGGU|AUGGC(UGUUC)GC-CAUUUAAAGUGGUACG-CGAGCUGG L.mucor 4200 GUUCA-GAAC|GUC(GUGA)-GACAGUU-CGGU-CCCUAU-CU|GCCGUG L.mucor 4250 G-G|CG-UUAGAAUAUU|GA-|GGAAAGC-UGC--------------UCC L.mucor 4300 (UAGUAC(GAGA)GGACC)GGAGUGG|ACGAACCUCUGGUGUACCGGU|U L.mucor 4350 GUCAC(GC-CA-)GUGGCA-UAGCCGGGUAGCU-AAGUUCGGACAGGAUA L.mucor 4400 ACCGCU(GAAAGCAUCUA)AGCGGGAAGCCCCUUCC|AAGAUGAGUAUGC L.mucor 4450 U|CU|-GGAGA(cuaga-)UCUCC--CUA-AAGG|-GC|CGUUG-(AAGA L.mucor 4500 CU-A)CGACG-UUGAUAG|GCACC|AUGUG-GAAGCGCA--(GUAA-)-- L.mucor 4550 UGUGU|GU-AGCUA|A|GGUGUACUAAUU-GCCCGUGAG|GCUUGA-UUC L.mucor 4600 Uauaaccc|ug--------------------------------------- L.mucor 4650 -------------------------------------------------- L.mucor 4700 -------------------------------------------------- L.mucor 4750 ----||||| C.burnetii 0 -------------------------------------------------- C.burnetii 50 -------uggaaucauuuaggguugcau|---------GGUCAAGUGAA- C.burnetii 100 --UAAGCGCAUAUGGUGGAUG|CCUUGG|CAGUAAG|AG|GC-GAUGAAG C.burnetii 150 GA|CGUA(GUAG-CC-)U|-GCG-AUAACUUCGGGG|-A-GCU(G-GCAA C.burnetii 200 ACA-)AGCGAUG-AUC-CGgaCAUU|UCCGAAUGGG(GAAA)CCC|aacc C.burnetii 250 u---(--------------------------------------------- C.burnetii 300 -------------------------------------------------- C.burnetii 350 -------------------------------------------------- C.burnetii 400 -------------------------------------------------- C.burnetii 450 ----uucg)---agguu-au-g-uauacu(ga-AUUCA--ua)ggu-aua C.burnetii 500 -c-g--aGG-C-gaAC|CU-GGGGAACU|GA(AACA)UCUAAGUA-CCCA C.burnetii 550 GAGGAAAAGAAAUC(-AACC--)GAGAU|UCC-GUCAGUAGC(GGCGA)G C.burnetii 600 CGA-AAG----A-ACA-GCCCAGUU--------------------(---- C.burnetii 650 -)------------------------------------------------ C.burnetii 700 ----------------------------acuaaaucauuauuuguucu-a C.burnetii 750 gcaGAAu-guu-c(u-ggaaa)g-uucagc|c(aua)gcGGG(UGAUAGC C.burnetii 800 )CCGGU-Accc-gaaagaguaaa-uaauguggg----uaac--------- C.burnetii 850 ---------------gauGAGUAGGUCGGGA(CACGUG-GUA)UCUUGAC C.burnetii 900 UGAACAU-GGG-GG(GACCAU)CC-UCC-AAGGCUAA----AUACUCCUU C.burnetii 950 ACUGACCGAUAGCG-AAC-CAGUACC(GUGA)-GGAA-AGGUGAAAAA-G C.burnetii 1000 AACCCC(GGCGA-)GGG-A--GUGAAA-UAGAACCUGAAACCGU-AUGCG C.burnetii 1050 UACAA-G-CUGUAGGAGCAU--uu-c------------(----uucg--) C.burnetii 1100 -------------gaa-auGUGACUGCGUACCU(UUU-GUAU|A)AUGG| C.burnetii 1150 -GUCAGCGACUUAC-UUGU-UGUAGC-GAGCUUAACC--(-GUCUA)--G C.burnetii 1200 G-GGAGGCGUAGG(GAAA-)CCGAGUCC(GAA-AU)GGGCGU-------- C.burnetii 1250 --------------------------u-uaG-UUGCAACGAGUA-GACCG C.burnetii 1300 AACCC-GAA-GCGA-UCUAUCUAUGGC|CAGGGUGAAGGUCAGG(UAAC) C.burnetii 1350 AC-UGACUGGAGG-CCGAACC--ACUAAU(-GUGAAAAA)GUUAG|GGG- C.burnetii 1400 AUGAG-CUGUGGAUAGGAGU(-GAAAG)GCUAAUCAAGCUCGGAGAUAGC C.burnetii 1450 UGGUUCUCCUCGAAAGCUAU(-UUAG)GUAGCGC|-CUCGUGUA----U| C.burnetii 1500 -gac|ucuugg|GGGUAG|AGC-ACUGU-UUCGGCUA-GG|-GGGCC(AU C.burnetii 1550 CCC)GGCCUACCAAACCGAG-GCAAACUCCGAA-UA-|CCA-a-g-a--a C.burnetii 1600 guuu---uA|gca-CGGGAGACACAC--ugcuGGGU(GAUAAG)GUCCGU C.burnetii 1650 -GGUG-GAAAGG-(--AACG--)-CCAGAUCGCCAGAUCGC-AG|CU-A- C.burnetii 1700 AGGUCcaaau-a-cac-guagu----GGAAACGAUGUG-GGAAGGCUCA- C.burnetii 1750 GACAGCCAGGACCUUGGC(UUAGAAGCA)GCCAU-CCU|U(UAA)A|GAA C.burnetii 1800 AGC(CUAAUA)GC|UCACUGGU-----CGAGU-CGU-CC--UGC|GCGGA C.burnetii 1850 AGAU-UUAA-CGGGGCUCAAACUGU-G|U|ACCGAAGCU|GCGG|cauca C.burnetii 1900 gaagaca(gaugacagaugacagaaauaugaaaaaagaaauaucuagcuu C.burnetii 1950 ugaagauuuagugguuuuucagaaagcguauaagcuuucuuuaaagcuuc C.burnetii 2000 auaaacuaacuuuaaguaugccuaaagaagagcaauaugga>.