Last modified in August 1995 (PDFs added in April 2008).


Konings D.A.M. & Gutell R.R. (1995)
A comparison of thermodynamic foldings with comparatively derived structures of 16S and 16S-like rRNAs.
RNA 1:559-574.

%bp: % base pairs predicted in optimal folding.
Base pairs that are predicted by thermodynamic folding (optimal folding) are indicated by thick tick marks.
Organism Diagram Length %bp
Archaea      
H.marismortui PS | PDF 1471 67
H.volcanii PS | PDF 1474 81
M.formicicum PS | PDF 1476 68
M.vannielli PS | PDF 1466 55
T.celer PS | PDF 1486 72
T.acidophilum PS | PDF 1471 65
S.solfataricus PS | PDF 1493 64
T.tenax PS | PDF 1503 68
(eu)Bacteria      
T.maritima PS | PDF 1562 68
T.thermophilus PS | PDF 1522 57
B.burgdorferi PS | PDF 1532 50
C.psittaci PS | PDF 1552 59
B.fragilis PS | PDF 1537 61
A.tumefaciens PS | PDF 1489 52
P.testosteroni PS | PDF 1536 64
E.coli PS | PDF 1542 54
D.desulfuricans PS | PDF 1551 49
Syn.sp.6301 PS | PDF 1488 57
A.globiformis PS | PDF 1531 61
Frankia sp. PS | PDF 1512 39
B.subtilis PS | PDF 1552 51
M.hyopneumoniae PS | PDF 1537 69
M.gallisepticum PS | PDF 1519 43
Chloroplasts      
C.reinhardtii PS | PDF 1474 32
C.vulgaris PS | PDF 1494 71
Cryptomonas sp. PS | PDF 1493 50
O.luteus PS | PDF 1537 64
A.longa PS | PDF 1520 41
E.gracilis PS | PDF 1491 41
C.caldarium PS | PDF 1492 55
P.palmata PS | PDF 1486 50
N.tabacum PS | PDF 1486 39
Z.mays PS | PDF 1490 33
M.polymorpha PS | PDF 1496 49
Mitochondria      
P.tetraulia PS | PDF 1677 33
S.cerevisiae PS | PDF 1686 40
A.nidulans PS | PDF 1437 34
Z.mays PS | PDF 1962 17
B.taurus PS | PDF 955 56
A.suum PS | PDF 701 17
C.elegans PS | PDF 697 23
Eucarya      
Hexamita PS | PDF 1550 27
G.muris PS | PDF 1432 22
G.ardeae PS | PDF 1435 30
G.intestinalis PS | PDF 1452 10
E.cuniculi PS | PDF 1299 18
V.necatrix PS | PDF 1250 28
B.bigemina PS | PDF 1701 20
Gracilariopsis sp. PS | PDF 1782 34
T.foetus PS | PDF 1571 41
S.cerevisiae PS | PDF 1801 32
C.neoformans PS | PDF 1802 47
P.magellanicus PS | PDF 1815 38
X.laevis PS | PDF 1826 42
M.musculus PS | PDF 1869 32
H.sapiens PS | PDF 1870 34

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