16S rRNA Model Base Pair Collective Scoring Data for Helical Element 1118
| Base Pair (1118:1155)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
93 |
96 |
83 |
0.88 |
0.91 |
0.98 |
1.89 |
0.98 |
0.99 |
-0.18 |
-0.17 |
0.00 |
0.58 |
7041 |
| 3 |
84 |
84 |
75 |
0.89 |
0.95 |
0.99 |
1.94 |
0.99 |
0.99 |
0.14 |
0.15 |
0.00 |
0.65 |
5729 |
| B |
81 |
81 |
73 |
0.90 |
0.95 |
0.99 |
1.94 |
0.99 |
0.99 |
1.04 |
1.05 |
0.00 |
0.77 |
4503 |
| A |
3 |
3 |
2 |
0.67 |
0.75 |
0.98 |
1.73 |
0.98 |
0.98 |
1.65 |
1.58 |
0.00 |
0.73 |
193 |
| C |
1 |
3 |
1 |
0.50 |
0.20 |
0.00 |
0.20 |
0.97 |
0.99 |
1.77 |
1.48 |
0.02 |
0.87 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.02 |
0.00 |
0.00 |
1028 |
| M |
8 |
9 |
7 |
0.82 |
0.03 |
0.00 |
0.03 |
0.03 |
0.05 |
-0.35 |
-0.35 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1119:1154)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
173 |
137 |
68 |
0.44 |
0.40 |
0.79 |
1.19 |
0.79 |
0.98 |
-0.32 |
-0.06 |
0.00 |
0.58 |
7026 |
| 3 |
148 |
112 |
55 |
0.42 |
0.36 |
0.80 |
1.16 |
0.80 |
0.99 |
0.04 |
0.38 |
0.00 |
0.65 |
5714 |
| B |
140 |
104 |
50 |
0.41 |
0.35 |
0.79 |
1.14 |
0.79 |
0.99 |
0.85 |
1.28 |
0.00 |
0.76 |
4484 |
| A |
8 |
8 |
5 |
0.62 |
0.79 |
0.96 |
1.75 |
0.96 |
0.96 |
1.26 |
1.14 |
0.00 |
0.75 |
197 |
| C |
16 |
17 |
9 |
0.55 |
0.80 |
0.87 |
1.67 |
0.87 |
0.97 |
0.14 |
-0.00 |
0.01 |
0.87 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
9 |
8 |
4 |
0.47 |
0.01 |
0.00 |
0.01 |
0.04 |
0.05 |
-0.36 |
-0.34 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1120:1153)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
214 |
216 |
176 |
0.82 |
0.92 |
0.96 |
1.88 |
0.96 |
0.99 |
-0.69 |
-0.68 |
0.00 |
0.58 |
7055 |
| 3 |
199 |
199 |
163 |
0.82 |
0.93 |
0.97 |
1.90 |
0.97 |
0.99 |
-0.44 |
-0.44 |
0.00 |
0.66 |
5743 |
| B |
186 |
190 |
154 |
0.82 |
0.94 |
0.97 |
1.90 |
0.97 |
0.99 |
0.28 |
0.26 |
0.00 |
0.77 |
4521 |
| A |
13 |
9 |
9 |
0.82 |
0.68 |
0.91 |
1.58 |
0.91 |
0.96 |
0.78 |
0.86 |
0.00 |
0.72 |
189 |
| C |
8 |
11 |
7 |
0.74 |
0.43 |
0.93 |
1.35 |
0.93 |
0.97 |
1.36 |
1.10 |
0.01 |
0.87 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
7 |
6 |
6 |
0.92 |
0.02 |
0.00 |
0.02 |
0.05 |
0.07 |
-0.32 |
-0.36 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1121:1152)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
150 |
202 |
66 |
0.38 |
0.45 |
0.73 |
1.18 |
0.73 |
0.99 |
-0.16 |
-0.37 |
0.00 |
0.58 |
7073 |
| 3 |
139 |
182 |
59 |
0.37 |
0.45 |
0.72 |
1.18 |
0.72 |
0.99 |
0.15 |
-0.09 |
0.00 |
0.66 |
5761 |
| B |
127 |
172 |
50 |
0.33 |
0.42 |
0.71 |
1.14 |
0.71 |
0.99 |
1.07 |
0.74 |
0.00 |
0.77 |
4532 |
| A |
12 |
10 |
9 |
0.82 |
0.84 |
0.92 |
1.75 |
0.92 |
0.98 |
0.43 |
0.47 |
0.00 |
0.74 |
196 |
| C |
5 |
13 |
3 |
0.33 |
0.36 |
0.79 |
1.16 |
0.79 |
0.99 |
1.07 |
0.60 |
0.01 |
0.88 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
6 |
7 |
4 |
0.61 |
0.01 |
0.00 |
0.01 |
0.06 |
0.07 |
-0.29 |
-0.31 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1122:1151)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
89 |
100 |
77 |
0.81 |
0.91 |
0.97 |
1.88 |
0.97 |
0.99 |
-0.41 |
-0.43 |
0.00 |
0.58 |
7063 |
| 3 |
79 |
79 |
67 |
0.85 |
0.94 |
0.98 |
1.92 |
0.98 |
0.99 |
-0.12 |
-0.14 |
0.00 |
0.66 |
5751 |
| B |
74 |
74 |
62 |
0.84 |
0.94 |
0.98 |
1.91 |
0.98 |
0.99 |
0.68 |
0.65 |
0.00 |
0.77 |
4520 |
| A |
5 |
5 |
5 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.75 |
0.75 |
0.00 |
0.75 |
198 |
| C |
6 |
14 |
6 |
0.60 |
0.22 |
0.71 |
0.93 |
0.71 |
0.93 |
0.99 |
0.60 |
0.01 |
0.88 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
4 |
7 |
4 |
0.73 |
0.03 |
0.00 |
0.03 |
0.06 |
0.06 |
-0.31 |
-0.34 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1123:1150)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
55 |
55 |
35 |
0.64 |
0.70 |
0.90 |
1.61 |
0.90 |
0.97 |
-0.21 |
-0.34 |
0.00 |
0.58 |
7084 |
| 3 |
40 |
44 |
26 |
0.62 |
0.71 |
0.90 |
1.61 |
0.90 |
0.98 |
0.09 |
-0.06 |
0.00 |
0.66 |
5772 |
| B |
37 |
42 |
24 |
0.61 |
0.71 |
0.90 |
1.61 |
0.90 |
0.98 |
0.92 |
0.71 |
0.00 |
0.78 |
4541 |
| A |
3 |
2 |
2 |
0.80 |
0.49 |
0.90 |
1.39 |
0.90 |
0.90 |
1.28 |
1.54 |
0.00 |
0.75 |
198 |
| C |
8 |
9 |
8 |
0.94 |
0.88 |
0.99 |
1.87 |
0.99 |
1.00 |
1.20 |
1.45 |
0.04 |
0.84 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
7 |
2 |
1 |
0.22 |
0.02 |
0.00 |
0.02 |
0.06 |
0.06 |
-0.31 |
-0.29 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1124:1149)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
53 |
66 |
27 |
0.45 |
0.42 |
0.93 |
1.34 |
0.93 |
0.96 |
0.13 |
0.15 |
0.00 |
0.58 |
7096 |
| 3 |
37 |
51 |
19 |
0.43 |
0.38 |
0.93 |
1.31 |
0.93 |
0.96 |
0.54 |
0.59 |
0.00 |
0.66 |
5784 |
| B |
32 |
43 |
14 |
0.37 |
0.34 |
0.93 |
1.27 |
0.93 |
0.96 |
1.51 |
1.56 |
0.00 |
0.78 |
4553 |
| A |
5 |
8 |
5 |
0.77 |
0.74 |
0.93 |
1.68 |
0.93 |
0.99 |
1.07 |
1.01 |
0.00 |
0.75 |
198 |
| C |
8 |
10 |
5 |
0.56 |
0.47 |
0.89 |
1.36 |
0.89 |
0.99 |
0.90 |
0.74 |
0.03 |
0.83 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
8 |
5 |
3 |
0.46 |
0.03 |
0.00 |
0.03 |
0.06 |
0.06 |
-0.34 |
-0.33 |
0.00 |
0.00 |
1152 |
| |
|
| Base Pair (1128:1144)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
22 |
22 |
9 |
0.41 |
0.46 |
0.99 |
1.44 |
0.99 |
0.99 |
0.36 |
0.36 |
0.00 |
0.57 |
7056 |
| 3 |
12 |
11 |
4 |
0.35 |
0.50 |
0.99 |
1.49 |
0.99 |
0.99 |
0.84 |
0.83 |
0.00 |
0.65 |
5744 |
| B |
10 |
9 |
2 |
0.21 |
0.20 |
0.99 |
1.20 |
0.99 |
0.99 |
1.81 |
1.81 |
0.00 |
0.76 |
4514 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.40 |
1.18 |
0.02 |
0.73 |
197 |
| C |
7 |
9 |
3 |
0.38 |
0.45 |
0.92 |
1.37 |
0.92 |
0.94 |
0.55 |
0.64 |
0.01 |
0.78 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
3 |
2 |
2 |
0.80 |
0.01 |
0.00 |
0.01 |
0.02 |
0.02 |
-0.21 |
-0.19 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1129:1143)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
79 |
84 |
50 |
0.61 |
0.69 |
0.94 |
1.64 |
0.94 |
0.98 |
-0.03 |
0.01 |
0.00 |
0.57 |
7077 |
| 3 |
70 |
73 |
45 |
0.63 |
0.71 |
0.95 |
1.66 |
0.95 |
0.98 |
0.34 |
0.42 |
0.00 |
0.65 |
5765 |
| B |
60 |
66 |
41 |
0.65 |
0.75 |
0.96 |
1.71 |
0.96 |
0.99 |
1.20 |
1.28 |
0.00 |
0.76 |
4536 |
| A |
10 |
7 |
4 |
0.47 |
0.32 |
0.74 |
1.06 |
0.74 |
0.89 |
0.64 |
0.84 |
0.00 |
0.72 |
196 |
| C |
9 |
10 |
5 |
0.53 |
0.48 |
0.91 |
1.39 |
0.91 |
0.94 |
0.41 |
0.36 |
0.02 |
0.75 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.16 |
-0.13 |
0.00 |
0.00 |
1152 |
| |
|
| Base Pair (1132:1142)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
31 |
27 |
20 |
0.69 |
0.59 |
0.99 |
1.57 |
0.99 |
0.99 |
0.28 |
0.28 |
0.00 |
0.56 |
7091 |
| 3 |
26 |
22 |
17 |
0.71 |
0.63 |
0.99 |
1.62 |
0.99 |
0.99 |
0.78 |
0.80 |
0.00 |
0.65 |
5779 |
| B |
20 |
17 |
13 |
0.70 |
0.54 |
0.99 |
1.53 |
0.99 |
1.00 |
1.75 |
1.77 |
0.00 |
0.77 |
4549 |
| A |
6 |
5 |
4 |
0.73 |
0.83 |
0.97 |
1.80 |
0.97 |
0.98 |
1.03 |
1.03 |
0.00 |
0.72 |
197 |
| C |
5 |
4 |
3 |
0.67 |
0.09 |
0.00 |
0.09 |
0.24 |
0.25 |
-0.71 |
-0.77 |
0.00 |
0.00 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.04 |
-0.04 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1133:1141)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
130 |
125 |
104 |
0.82 |
0.92 |
0.98 |
1.90 |
0.98 |
0.99 |
-0.32 |
-0.32 |
0.00 |
0.54 |
7047 |
| 3 |
126 |
121 |
102 |
0.83 |
0.94 |
0.98 |
1.92 |
0.98 |
0.99 |
0.01 |
0.01 |
0.00 |
0.63 |
5735 |
| B |
110 |
110 |
92 |
0.84 |
0.94 |
0.98 |
1.93 |
0.98 |
0.99 |
0.77 |
0.76 |
0.00 |
0.74 |
4508 |
| A |
16 |
11 |
10 |
0.74 |
0.86 |
0.92 |
1.78 |
0.92 |
0.96 |
-0.07 |
0.00 |
0.00 |
0.72 |
194 |
| C |
3 |
3 |
2 |
0.67 |
0.23 |
0.63 |
0.86 |
0.63 |
0.85 |
-0.73 |
-0.63 |
0.01 |
0.30 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
1 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.04 |
-0.04 |
0.00 |
0.00 |
1152 |
| |
| Base Pair (1134:1140)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
162 |
163 |
115 |
0.71 |
0.90 |
0.94 |
1.84 |
0.94 |
0.98 |
-0.91 |
-0.88 |
0.00 |
0.36 |
7085 |
| 3 |
160 |
160 |
114 |
0.71 |
0.90 |
0.94 |
1.84 |
0.94 |
0.98 |
-0.90 |
-0.86 |
0.00 |
0.42 |
5774 |
| B |
143 |
144 |
104 |
0.72 |
0.91 |
0.94 |
1.85 |
0.94 |
0.98 |
-0.82 |
-0.77 |
0.00 |
0.48 |
4545 |
| A |
17 |
16 |
10 |
0.61 |
0.84 |
0.89 |
1.74 |
0.89 |
0.96 |
-0.11 |
-0.11 |
0.01 |
0.71 |
195 |
| C |
2 |
2 |
1 |
0.50 |
0.03 |
0.00 |
0.03 |
0.05 |
0.06 |
-0.36 |
-0.59 |
0.00 |
0.00 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.03 |
0.00 |
0.00 |
1028 |
| M |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.04 |
-0.05 |
0.00 |
0.00 |
1152 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)