16S rRNA Model Base Pair Collective Scoring Data for Helical Element 1350
| Base Pair (1350:1372)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
17 |
23 |
11 |
0.55 |
0.78 |
0.99 |
1.77 |
0.99 |
0.99 |
1.76 |
1.72 |
0.00 |
0.81 |
6939 |
| 3 |
14 |
16 |
9 |
0.60 |
0.81 |
0.99 |
1.80 |
0.99 |
0.99 |
1.74 |
1.70 |
0.00 |
0.80 |
5748 |
| B |
2 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.99 |
1.96 |
0.00 |
0.77 |
4519 |
| A |
1 |
1 |
0 |
0.00 |
0.86 |
0.99 |
1.85 |
0.97 |
0.97 |
1.79 |
1.79 |
0.00 |
0.78 |
205 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
2.00 |
1.91 |
0.00 |
0.93 |
169 |
| E |
11 |
11 |
9 |
0.82 |
0.89 |
0.97 |
1.86 |
0.97 |
0.98 |
1.14 |
1.01 |
0.00 |
0.97 |
1022 |
| M |
3 |
6 |
2 |
0.44 |
0.14 |
0.00 |
0.14 |
0.99 |
0.99 |
1.90 |
1.86 |
0.00 |
0.88 |
1025 |
| |
| Base Pair (1351:1371)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
66 |
70 |
36 |
0.53 |
0.69 |
0.91 |
1.61 |
0.22 |
0.99 |
0.75 |
0.85 |
0.00 |
0.82 |
6968 |
| 3 |
25 |
21 |
7 |
0.30 |
0.49 |
0.90 |
1.39 |
0.11 |
0.99 |
1.13 |
1.11 |
0.00 |
0.80 |
5768 |
| B |
8 |
4 |
1 |
0.17 |
0.33 |
0.99 |
1.33 |
0.01 |
1.00 |
1.92 |
1.94 |
0.00 |
0.78 |
4543 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.34 |
1.00 |
1.07 |
2.00 |
0.00 |
0.77 |
204 |
| C |
2 |
1 |
1 |
0.67 |
0.67 |
0.99 |
1.66 |
0.02 |
1.00 |
1.79 |
1.91 |
0.01 |
0.92 |
169 |
| E |
16 |
17 |
6 |
0.36 |
0.17 |
0.00 |
0.17 |
0.54 |
0.98 |
1.30 |
0.80 |
0.00 |
0.96 |
1019 |
| M |
39 |
48 |
28 |
0.64 |
0.80 |
0.95 |
1.75 |
0.87 |
0.98 |
0.99 |
0.88 |
0.00 |
0.89 |
1034 |
| |
| Base Pair (1352:1370)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
103 |
95 |
46 |
0.47 |
0.71 |
0.95 |
1.66 |
0.95 |
0.97 |
1.14 |
1.16 |
0.00 |
0.82 |
6984 |
| 3 |
24 |
17 |
10 |
0.49 |
0.32 |
0.96 |
1.28 |
0.96 |
0.98 |
1.72 |
1.73 |
0.00 |
0.80 |
5771 |
| B |
8 |
6 |
7 |
1.00 |
0.73 |
1.00 |
1.73 |
1.00 |
1.00 |
1.88 |
1.89 |
0.00 |
0.78 |
4545 |
| A |
1 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.96 |
0.97 |
1.82 |
1.86 |
0.00 |
0.77 |
203 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.93 |
169 |
| E |
15 |
9 |
3 |
0.25 |
0.20 |
0.00 |
0.20 |
0.82 |
0.90 |
1.25 |
1.26 |
0.00 |
0.96 |
1021 |
| M |
79 |
78 |
36 |
0.46 |
0.82 |
0.87 |
1.70 |
0.87 |
0.91 |
0.06 |
0.04 |
0.00 |
0.90 |
1047 |
| |
| Base Pair (1353:1369)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
112 |
120 |
55 |
0.47 |
0.70 |
0.95 |
1.65 |
0.95 |
0.96 |
1.10 |
1.12 |
0.00 |
0.82 |
6987 |
| 3 |
27 |
31 |
16 |
0.55 |
0.56 |
0.98 |
1.54 |
0.98 |
0.99 |
1.73 |
1.64 |
0.00 |
0.80 |
5776 |
| B |
8 |
9 |
5 |
0.59 |
0.59 |
0.99 |
1.58 |
0.99 |
1.00 |
1.89 |
1.88 |
0.00 |
0.78 |
4550 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.77 |
203 |
| C |
2 |
1 |
1 |
0.67 |
0.50 |
0.99 |
1.49 |
0.99 |
0.99 |
1.91 |
1.95 |
0.00 |
0.92 |
168 |
| E |
19 |
22 |
11 |
0.54 |
0.56 |
0.89 |
1.45 |
0.89 |
0.99 |
1.27 |
1.04 |
0.00 |
0.97 |
1021 |
| M |
83 |
88 |
38 |
0.44 |
0.63 |
0.78 |
1.40 |
0.78 |
0.79 |
0.20 |
0.30 |
0.00 |
0.91 |
1051 |
| |
| Base Pair (1354:1368)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
183 |
160 |
115 |
0.67 |
0.87 |
0.96 |
1.82 |
0.96 |
0.99 |
0.62 |
0.69 |
0.00 |
0.82 |
6996 |
| 3 |
113 |
90 |
73 |
0.72 |
0.81 |
0.96 |
1.77 |
0.96 |
0.99 |
1.16 |
1.22 |
0.00 |
0.80 |
5781 |
| B |
79 |
81 |
67 |
0.84 |
0.95 |
0.99 |
1.94 |
0.99 |
0.99 |
1.15 |
1.13 |
0.00 |
0.78 |
4553 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.86 |
1.81 |
0.00 |
0.76 |
201 |
| C |
6 |
6 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.75 |
1.75 |
0.00 |
0.93 |
169 |
| E |
31 |
6 |
3 |
0.16 |
0.19 |
0.00 |
0.19 |
0.82 |
0.99 |
1.17 |
1.70 |
0.00 |
0.97 |
1025 |
| M |
64 |
64 |
36 |
0.56 |
0.88 |
0.93 |
1.81 |
0.93 |
0.96 |
0.36 |
0.39 |
0.00 |
0.91 |
1054 |
| |
| Base Pair (1355:1367)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
229 |
215 |
175 |
0.79 |
0.94 |
0.97 |
1.92 |
0.97 |
0.99 |
0.74 |
0.76 |
0.00 |
0.82 |
7007 |
| 3 |
140 |
141 |
128 |
0.91 |
0.96 |
0.98 |
1.94 |
0.98 |
0.99 |
0.90 |
0.90 |
0.00 |
0.81 |
5795 |
| B |
113 |
113 |
104 |
0.92 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.93 |
0.93 |
0.00 |
0.78 |
4564 |
| A |
8 |
8 |
8 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.23 |
1.23 |
0.00 |
0.78 |
205 |
| C |
12 |
12 |
12 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.67 |
0.67 |
0.00 |
0.93 |
169 |
| E |
19 |
20 |
16 |
0.82 |
0.86 |
0.94 |
1.80 |
0.94 |
0.98 |
0.75 |
0.79 |
0.00 |
0.97 |
1024 |
| M |
77 |
62 |
35 |
0.50 |
0.84 |
0.92 |
1.76 |
0.92 |
0.96 |
0.62 |
0.76 |
0.00 |
0.90 |
1051 |
| |
| Base Pair (1356:1366)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
170 |
160 |
117 |
0.71 |
0.87 |
0.95 |
1.82 |
0.95 |
0.99 |
0.64 |
0.62 |
0.00 |
0.82 |
7015 |
| 3 |
111 |
113 |
84 |
0.75 |
0.88 |
0.95 |
1.84 |
0.95 |
1.00 |
0.62 |
0.59 |
0.00 |
0.81 |
5802 |
| B |
80 |
89 |
70 |
0.83 |
0.92 |
0.97 |
1.89 |
0.97 |
1.00 |
0.79 |
0.75 |
0.00 |
0.78 |
4575 |
| A |
14 |
9 |
5 |
0.43 |
0.43 |
0.73 |
1.16 |
0.47 |
1.00 |
0.61 |
0.93 |
0.00 |
0.77 |
202 |
| C |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.51 |
1.51 |
0.00 |
0.93 |
169 |
| E |
17 |
15 |
11 |
0.69 |
0.90 |
0.96 |
1.86 |
0.96 |
0.99 |
0.74 |
0.77 |
0.00 |
0.97 |
1023 |
| M |
55 |
43 |
29 |
0.59 |
0.81 |
0.92 |
1.72 |
0.92 |
0.93 |
0.70 |
0.79 |
0.00 |
0.90 |
1052 |
| |
| Base Pair (1357:1365) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
86 |
84 |
54 |
0.64 |
0.60 |
0.89 |
1.49 |
0.17 |
0.18 |
1.01 |
0.88 |
0.00 |
0.82 |
7030 |
| 3 |
49 |
48 |
39 |
0.80 |
0.72 |
0.93 |
1.64 |
0.20 |
0.21 |
1.00 |
0.91 |
0.00 |
0.81 |
5803 |
| B |
30 |
29 |
26 |
0.88 |
0.92 |
0.99 |
1.92 |
0.00 |
0.00 |
1.63 |
1.62 |
0.00 |
0.78 |
4572 |
| A |
8 |
8 |
8 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.66 |
0.66 |
0.00 |
0.78 |
206 |
| C |
6 |
3 |
3 |
0.67 |
0.50 |
0.97 |
1.47 |
0.01 |
0.01 |
1.58 |
1.74 |
0.00 |
0.92 |
169 |
| E |
11 |
11 |
7 |
0.64 |
0.60 |
0.94 |
1.53 |
0.94 |
0.97 |
1.19 |
1.12 |
0.00 |
0.97 |
1023 |
| M |
31 |
33 |
12 |
0.38 |
0.11 |
0.00 |
0.11 |
0.03 |
0.04 |
1.41 |
1.35 |
0.00 |
0.92 |
1066 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)