16S rRNA Model Base Pair Collective Scoring Data for Helical Element 1399
| Base Pair (1399:1504) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
13 |
9 |
3 |
0.27 |
0.76 |
0.99 |
1.75 |
0.99 |
1.00 |
1.87 |
1.81 |
0.00 |
0.42 |
3570 |
| 3 |
4 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.98 |
1.94 |
0.00 |
0.37 |
2677 |
| B |
2 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.98 |
1.95 |
0.00 |
0.29 |
1733 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.39 |
104 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.92 |
0.01 |
0.74 |
135 |
| E |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.95 |
1.95 |
0.00 |
0.79 |
837 |
| M |
9 |
7 |
3 |
0.38 |
0.89 |
0.99 |
1.88 |
0.99 |
1.00 |
1.50 |
1.51 |
0.00 |
0.66 |
762 |
| |
|
| Base Pair (1401:1501)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
11 |
5 |
1 |
0.12 |
0.75 |
1.00 |
1.75 |
1.00 |
1.00 |
1.89 |
1.86 |
0.00 |
0.43 |
3713 |
| 3 |
7 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.95 |
1.96 |
0.00 |
0.39 |
2784 |
| B |
6 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.94 |
1.96 |
0.00 |
0.31 |
1817 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.39 |
104 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.78 |
142 |
| E |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.98 |
2.00 |
0.00 |
0.81 |
860 |
| M |
4 |
3 |
1 |
0.29 |
0.90 |
0.99 |
1.90 |
0.99 |
0.99 |
1.65 |
1.65 |
0.00 |
0.68 |
791 |
| |
| Base Pair (1402:1500) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
14 |
6 |
3 |
0.30 |
0.40 |
1.00 |
1.40 |
0.00 |
0.01 |
1.94 |
1.94 |
0.00 |
0.44 |
3767 |
| 3 |
9 |
3 |
1 |
0.17 |
0.08 |
0.00 |
0.08 |
0.00 |
0.00 |
1.95 |
1.95 |
0.00 |
0.40 |
2839 |
| B |
7 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.95 |
1.95 |
0.00 |
0.32 |
1871 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
2.00 |
2.00 |
0.00 |
0.39 |
104 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
2.00 |
2.00 |
0.00 |
0.78 |
142 |
| E |
2 |
2 |
1 |
0.50 |
0.25 |
1.00 |
1.25 |
0.00 |
0.00 |
1.96 |
1.96 |
0.00 |
0.82 |
861 |
| M |
5 |
3 |
2 |
0.50 |
0.88 |
1.00 |
1.87 |
0.00 |
0.01 |
1.88 |
1.91 |
0.00 |
0.68 |
790 |
| |
|
| Base Pair (1404:1497)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
11 |
9 |
4 |
0.40 |
0.37 |
1.00 |
1.36 |
1.00 |
1.00 |
1.95 |
1.95 |
0.00 |
0.45 |
3817 |
| 3 |
5 |
4 |
1 |
0.22 |
0.14 |
0.00 |
0.14 |
1.00 |
1.00 |
1.97 |
1.97 |
0.00 |
0.40 |
2875 |
| B |
4 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.98 |
1.99 |
0.00 |
0.32 |
1901 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.95 |
1.92 |
0.00 |
0.39 |
104 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
2.00 |
1.90 |
0.00 |
0.81 |
148 |
| E |
0 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
1.97 |
0.00 |
0.82 |
867 |
| M |
6 |
4 |
3 |
0.60 |
0.60 |
0.99 |
1.59 |
0.99 |
1.00 |
1.86 |
1.94 |
0.00 |
0.69 |
798 |
| |
| Base Pair (1405:1496)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
9 |
10 |
3 |
0.32 |
0.46 |
0.99 |
1.45 |
0.99 |
1.00 |
1.94 |
1.88 |
0.00 |
0.43 |
3705 |
| 3 |
4 |
5 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.97 |
1.91 |
0.00 |
0.38 |
2762 |
| B |
4 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.97 |
1.89 |
0.00 |
0.31 |
1801 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.34 |
90 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.94 |
1.87 |
0.01 |
0.81 |
148 |
| E |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
1.97 |
0.00 |
0.82 |
868 |
| M |
4 |
4 |
2 |
0.50 |
0.80 |
0.99 |
1.79 |
0.99 |
1.00 |
1.84 |
1.82 |
0.00 |
0.69 |
799 |
| |
|
| Base Pair (1407:1494) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
12 |
5 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.94 |
1.94 |
0.00 |
0.44 |
3780 |
| 3 |
10 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.94 |
1.93 |
0.00 |
0.39 |
2836 |
| B |
9 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.94 |
1.92 |
0.00 |
0.32 |
1855 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
1.00 |
1.87 |
2.00 |
0.00 |
0.36 |
95 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.81 |
148 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.96 |
1.96 |
0.00 |
0.84 |
883 |
| M |
2 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
1.99 |
0.00 |
0.69 |
800 |
| |
|
| Base Pair (1409:1491)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
59 |
99 |
25 |
0.32 |
0.24 |
0.73 |
0.97 |
0.73 |
0.74 |
1.35 |
0.52 |
0.00 |
0.49 |
4169 |
| 3 |
43 |
35 |
22 |
0.56 |
0.49 |
0.88 |
1.37 |
0.88 |
0.89 |
1.34 |
0.98 |
0.00 |
0.44 |
3193 |
| B |
37 |
23 |
16 |
0.53 |
0.84 |
0.97 |
1.81 |
0.97 |
0.98 |
1.30 |
1.33 |
0.00 |
0.37 |
2173 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.90 |
0.86 |
0.00 |
0.46 |
120 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.94 |
2.00 |
0.00 |
0.82 |
149 |
| E |
3 |
9 |
3 |
0.50 |
0.05 |
0.00 |
0.05 |
0.65 |
0.65 |
1.84 |
0.79 |
0.00 |
0.85 |
899 |
| M |
16 |
64 |
4 |
0.10 |
0.03 |
0.00 |
0.03 |
0.07 |
0.11 |
1.49 |
0.34 |
0.00 |
0.71 |
830 |
| |
| Base Pair (1410:1490)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
61 |
38 |
20 |
0.40 |
0.79 |
0.88 |
1.66 |
0.88 |
0.94 |
0.24 |
0.20 |
0.00 |
0.51 |
4303 |
| 3 |
38 |
26 |
15 |
0.47 |
0.91 |
0.95 |
1.87 |
0.95 |
0.99 |
0.57 |
0.49 |
0.00 |
0.46 |
3312 |
| B |
26 |
13 |
7 |
0.36 |
0.82 |
0.94 |
1.76 |
0.94 |
0.99 |
1.09 |
1.08 |
0.00 |
0.39 |
2285 |
| A |
7 |
6 |
5 |
0.77 |
0.98 |
0.99 |
1.98 |
0.99 |
0.99 |
0.60 |
0.47 |
0.00 |
0.48 |
128 |
| C |
4 |
1 |
1 |
0.40 |
0.20 |
0.00 |
0.20 |
0.97 |
1.00 |
1.76 |
1.94 |
0.00 |
0.82 |
149 |
| E |
5 |
7 |
4 |
0.67 |
0.89 |
0.99 |
1.88 |
0.99 |
1.00 |
1.67 |
1.58 |
0.00 |
0.85 |
898 |
| M |
19 |
11 |
4 |
0.27 |
0.24 |
0.54 |
0.78 |
0.55 |
0.70 |
0.70 |
0.57 |
0.00 |
0.73 |
845 |
| |
| Base Pair (1411:1489)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
46 |
38 |
23 |
0.55 |
0.93 |
0.98 |
1.91 |
0.98 |
0.99 |
1.02 |
0.99 |
0.00 |
0.54 |
4638 |
| 3 |
25 |
20 |
11 |
0.49 |
0.94 |
0.98 |
1.92 |
0.98 |
0.99 |
0.93 |
0.86 |
0.00 |
0.51 |
3647 |
| B |
16 |
13 |
4 |
0.28 |
0.92 |
0.98 |
1.90 |
0.98 |
0.98 |
1.27 |
1.24 |
0.00 |
0.44 |
2600 |
| A |
3 |
1 |
1 |
0.50 |
0.91 |
0.97 |
1.88 |
0.97 |
0.99 |
1.00 |
0.94 |
0.00 |
0.55 |
145 |
| C |
4 |
3 |
2 |
0.57 |
0.89 |
0.99 |
1.88 |
0.99 |
1.00 |
1.56 |
1.60 |
0.00 |
0.81 |
149 |
| E |
6 |
6 |
6 |
1.00 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.78 |
0.75 |
0.00 |
0.85 |
901 |
| M |
17 |
15 |
10 |
0.62 |
0.68 |
0.99 |
1.67 |
0.99 |
0.99 |
1.67 |
1.71 |
0.00 |
0.73 |
845 |
| |
| Base Pair (1412:1488)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
34 |
38 |
22 |
0.61 |
0.89 |
0.97 |
1.86 |
0.97 |
0.99 |
1.25 |
1.14 |
0.00 |
0.56 |
4741 |
| 3 |
12 |
12 |
4 |
0.33 |
0.70 |
0.99 |
1.69 |
0.99 |
0.99 |
1.77 |
1.75 |
0.00 |
0.52 |
3750 |
| B |
7 |
8 |
2 |
0.27 |
0.63 |
0.99 |
1.62 |
0.99 |
0.99 |
1.90 |
1.86 |
0.00 |
0.46 |
2692 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.58 |
152 |
| C |
3 |
3 |
3 |
1.00 |
0.98 |
0.99 |
1.98 |
0.99 |
0.99 |
0.93 |
0.98 |
0.01 |
0.81 |
149 |
| E |
5 |
4 |
2 |
0.44 |
0.74 |
0.97 |
1.71 |
0.97 |
1.00 |
1.42 |
1.49 |
0.00 |
0.86 |
905 |
| M |
19 |
23 |
15 |
0.71 |
0.67 |
0.95 |
1.62 |
0.90 |
0.98 |
1.30 |
1.23 |
0.00 |
0.73 |
845 |
| |
| Base Pair (1413:1487) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
38 |
44 |
20 |
0.49 |
0.50 |
0.81 |
1.31 |
0.36 |
0.36 |
0.78 |
1.20 |
0.00 |
0.56 |
4800 |
| 3 |
9 |
10 |
5 |
0.53 |
0.91 |
0.98 |
1.88 |
0.24 |
0.24 |
1.20 |
1.17 |
0.00 |
0.53 |
3809 |
| B |
3 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.01 |
1.97 |
1.95 |
0.00 |
0.47 |
2752 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.03 |
0.03 |
1.84 |
1.94 |
0.00 |
0.56 |
148 |
| C |
9 |
10 |
4 |
0.42 |
0.25 |
0.88 |
1.13 |
0.12 |
0.12 |
1.41 |
1.41 |
0.00 |
0.82 |
149 |
| E |
6 |
6 |
5 |
0.83 |
0.83 |
0.99 |
1.82 |
0.99 |
0.99 |
1.67 |
1.55 |
0.00 |
0.86 |
908 |
| M |
20 |
24 |
11 |
0.50 |
0.48 |
0.95 |
1.43 |
0.95 |
0.96 |
1.57 |
1.50 |
0.00 |
0.73 |
845 |
| |
| Base Pair (1414:1486)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
117 |
133 |
39 |
0.31 |
0.33 |
0.59 |
0.92 |
0.38 |
0.77 |
0.49 |
0.82 |
0.00 |
0.56 |
4802 |
| 3 |
52 |
53 |
16 |
0.30 |
0.40 |
0.67 |
1.07 |
0.31 |
0.76 |
0.55 |
1.01 |
0.00 |
0.53 |
3810 |
| B |
41 |
40 |
8 |
0.20 |
0.01 |
0.00 |
0.01 |
0.36 |
0.99 |
1.10 |
1.53 |
0.00 |
0.46 |
2725 |
| A |
6 |
6 |
5 |
0.83 |
0.39 |
0.88 |
1.27 |
0.88 |
0.88 |
1.59 |
1.28 |
0.00 |
0.62 |
164 |
| C |
14 |
15 |
1 |
0.07 |
0.15 |
0.00 |
0.15 |
0.26 |
0.91 |
0.89 |
0.99 |
0.01 |
0.82 |
150 |
| E |
5 |
7 |
3 |
0.50 |
0.33 |
0.94 |
1.26 |
0.06 |
0.06 |
1.54 |
1.67 |
0.00 |
0.87 |
920 |
| M |
51 |
65 |
22 |
0.38 |
0.48 |
0.69 |
1.17 |
0.69 |
0.80 |
0.53 |
0.35 |
0.00 |
0.73 |
845 |
| |
| Base Pair (1415:1485)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
52 |
64 |
27 |
0.47 |
0.92 |
0.96 |
1.88 |
0.41 |
0.98 |
0.67 |
0.51 |
0.00 |
0.56 |
4800 |
| 3 |
22 |
36 |
15 |
0.52 |
0.93 |
0.97 |
1.90 |
0.32 |
0.98 |
1.08 |
0.90 |
0.00 |
0.53 |
3808 |
| B |
11 |
26 |
5 |
0.27 |
0.74 |
0.98 |
1.73 |
0.07 |
0.99 |
1.68 |
1.56 |
0.00 |
0.46 |
2717 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.87 |
1.87 |
0.00 |
0.63 |
167 |
| C |
8 |
4 |
1 |
0.17 |
0.10 |
0.00 |
0.10 |
0.11 |
0.99 |
1.53 |
1.57 |
0.00 |
0.82 |
150 |
| E |
9 |
8 |
8 |
0.94 |
0.36 |
0.95 |
1.31 |
0.95 |
0.95 |
1.60 |
1.50 |
0.00 |
0.87 |
923 |
| M |
22 |
24 |
11 |
0.48 |
0.76 |
0.94 |
1.69 |
0.87 |
0.97 |
0.88 |
0.81 |
0.00 |
0.72 |
845 |
| |
| Base Pair (1416:1484)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
81 |
86 |
54 |
0.65 |
0.96 |
0.98 |
1.94 |
0.98 |
0.99 |
0.30 |
0.30 |
0.00 |
0.58 |
4972 |
| 3 |
52 |
50 |
34 |
0.67 |
0.97 |
0.98 |
1.95 |
0.98 |
0.99 |
0.38 |
0.34 |
0.00 |
0.55 |
3982 |
| B |
46 |
45 |
30 |
0.66 |
0.95 |
0.98 |
1.93 |
0.98 |
0.99 |
0.77 |
0.75 |
0.00 |
0.49 |
2885 |
| A |
3 |
1 |
1 |
0.50 |
0.60 |
0.99 |
1.59 |
0.99 |
0.99 |
1.82 |
1.61 |
0.01 |
0.62 |
168 |
| C |
7 |
8 |
4 |
0.53 |
0.79 |
0.97 |
1.76 |
0.97 |
0.99 |
1.50 |
1.43 |
0.00 |
0.82 |
150 |
| E |
3 |
4 |
3 |
0.86 |
0.97 |
1.00 |
1.97 |
1.00 |
1.00 |
1.55 |
1.52 |
0.00 |
0.88 |
928 |
| M |
22 |
28 |
16 |
0.64 |
0.74 |
0.95 |
1.69 |
0.95 |
0.98 |
0.89 |
1.01 |
0.00 |
0.72 |
843 |
| |
|
| Base Pair (1419:1481)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
37 |
81 |
14 |
0.24 |
0.41 |
0.69 |
1.10 |
0.52 |
0.99 |
0.37 |
-0.24 |
0.00 |
0.52 |
5156 |
| 3 |
20 |
63 |
8 |
0.19 |
0.41 |
0.68 |
1.09 |
0.54 |
0.99 |
1.09 |
0.38 |
0.00 |
0.58 |
4160 |
| B |
14 |
51 |
3 |
0.09 |
0.01 |
0.00 |
0.01 |
0.38 |
0.99 |
1.82 |
0.96 |
0.00 |
0.52 |
3055 |
| A |
1 |
5 |
0 |
0.00 |
0.55 |
0.90 |
1.45 |
0.90 |
1.00 |
1.45 |
0.99 |
0.02 |
0.62 |
169 |
| C |
7 |
4 |
1 |
0.18 |
0.03 |
0.00 |
0.03 |
0.19 |
0.99 |
1.36 |
1.73 |
0.00 |
0.83 |
151 |
| E |
5 |
7 |
5 |
0.83 |
0.77 |
0.99 |
1.75 |
0.99 |
1.00 |
1.74 |
1.70 |
0.00 |
0.88 |
935 |
| M |
10 |
14 |
5 |
0.42 |
0.04 |
0.00 |
0.04 |
0.03 |
0.08 |
-0.47 |
-0.50 |
0.00 |
0.00 |
848 |
| |
| Base Pair (1420:1480)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
81 |
74 |
24 |
0.31 |
0.33 |
0.58 |
0.91 |
0.41 |
0.99 |
0.12 |
-0.22 |
0.00 |
0.53 |
5255 |
| 3 |
58 |
52 |
15 |
0.27 |
0.35 |
0.60 |
0.94 |
0.40 |
1.00 |
0.82 |
0.41 |
0.00 |
0.59 |
4258 |
| B |
51 |
48 |
12 |
0.24 |
0.01 |
0.00 |
0.01 |
0.52 |
0.99 |
1.49 |
0.96 |
0.00 |
0.54 |
3146 |
| A |
5 |
2 |
2 |
0.57 |
0.61 |
0.87 |
1.48 |
0.34 |
1.00 |
0.39 |
0.89 |
0.00 |
0.63 |
171 |
| C |
13 |
9 |
4 |
0.36 |
0.39 |
0.78 |
1.17 |
0.78 |
0.99 |
0.80 |
1.24 |
0.00 |
0.83 |
151 |
| E |
2 |
2 |
2 |
1.00 |
0.00 |
0.00 |
0.00 |
0.02 |
1.00 |
1.87 |
1.94 |
0.00 |
0.89 |
940 |
| M |
10 |
13 |
5 |
0.43 |
0.02 |
0.00 |
0.02 |
0.05 |
0.09 |
-0.47 |
-0.49 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1421:1479)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
141 |
122 |
57 |
0.43 |
0.76 |
0.82 |
1.59 |
0.82 |
0.99 |
-0.47 |
-0.55 |
0.00 |
0.53 |
5252 |
| 3 |
116 |
97 |
44 |
0.41 |
0.77 |
0.82 |
1.59 |
0.82 |
0.99 |
0.07 |
0.03 |
0.00 |
0.59 |
4255 |
| B |
91 |
70 |
23 |
0.29 |
0.67 |
0.77 |
1.44 |
0.77 |
0.99 |
0.48 |
0.43 |
0.00 |
0.54 |
3142 |
| A |
6 |
8 |
5 |
0.71 |
0.81 |
0.93 |
1.73 |
0.93 |
1.00 |
0.56 |
0.49 |
0.00 |
0.63 |
171 |
| C |
12 |
14 |
6 |
0.46 |
0.55 |
0.87 |
1.42 |
0.87 |
0.96 |
1.11 |
0.76 |
0.01 |
0.82 |
151 |
| E |
19 |
19 |
16 |
0.84 |
0.86 |
0.98 |
1.84 |
0.98 |
0.99 |
1.23 |
1.23 |
0.00 |
0.89 |
941 |
| M |
13 |
11 |
8 |
0.67 |
0.04 |
0.00 |
0.04 |
0.09 |
0.09 |
-0.45 |
-0.44 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1422:1478)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
108 |
165 |
38 |
0.28 |
0.15 |
0.00 |
0.15 |
0.59 |
0.96 |
0.16 |
-0.08 |
0.00 |
0.53 |
5268 |
| 3 |
86 |
144 |
26 |
0.23 |
0.15 |
0.00 |
0.15 |
0.60 |
0.96 |
0.81 |
0.57 |
0.00 |
0.59 |
4271 |
| B |
60 |
119 |
11 |
0.12 |
0.21 |
0.59 |
0.80 |
0.48 |
0.96 |
1.17 |
0.56 |
0.00 |
0.54 |
3155 |
| A |
13 |
12 |
9 |
0.72 |
0.80 |
0.90 |
1.70 |
0.90 |
0.95 |
0.59 |
0.58 |
0.00 |
0.63 |
170 |
| C |
11 |
7 |
3 |
0.33 |
0.12 |
0.00 |
0.12 |
0.14 |
0.93 |
1.21 |
1.32 |
0.01 |
0.82 |
151 |
| E |
13 |
13 |
6 |
0.46 |
0.82 |
0.93 |
1.75 |
0.93 |
0.97 |
0.79 |
0.73 |
0.00 |
0.90 |
945 |
| M |
11 |
14 |
9 |
0.72 |
0.04 |
0.00 |
0.04 |
0.10 |
0.10 |
-0.43 |
-0.47 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1423:1477)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
86 |
125 |
33 |
0.31 |
0.34 |
0.59 |
0.93 |
0.58 |
0.99 |
0.17 |
-0.29 |
0.00 |
0.54 |
5354 |
| 3 |
63 |
105 |
24 |
0.29 |
0.34 |
0.60 |
0.95 |
0.58 |
0.99 |
0.83 |
0.33 |
0.00 |
0.60 |
4357 |
| B |
45 |
84 |
13 |
0.20 |
0.03 |
0.00 |
0.03 |
0.48 |
0.99 |
1.40 |
0.80 |
0.00 |
0.55 |
3229 |
| A |
7 |
8 |
4 |
0.53 |
0.02 |
0.00 |
0.02 |
0.28 |
1.00 |
1.25 |
1.07 |
0.00 |
0.63 |
172 |
| C |
11 |
11 |
5 |
0.46 |
0.42 |
0.80 |
1.22 |
0.80 |
0.96 |
1.10 |
1.00 |
0.01 |
0.82 |
151 |
| E |
11 |
13 |
7 |
0.58 |
0.68 |
0.95 |
1.63 |
0.95 |
0.99 |
1.24 |
1.09 |
0.00 |
0.91 |
955 |
| M |
12 |
9 |
4 |
0.38 |
0.03 |
0.00 |
0.03 |
0.07 |
0.10 |
-0.45 |
-0.44 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1424:1476)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
153 |
160 |
66 |
0.42 |
0.66 |
0.77 |
1.43 |
0.77 |
0.93 |
-0.29 |
-0.43 |
0.00 |
0.55 |
5417 |
| 3 |
129 |
134 |
53 |
0.40 |
0.67 |
0.78 |
1.45 |
0.78 |
0.93 |
0.32 |
0.16 |
0.00 |
0.61 |
4421 |
| B |
112 |
110 |
45 |
0.41 |
0.54 |
0.75 |
1.29 |
0.75 |
0.92 |
0.49 |
0.51 |
0.00 |
0.56 |
3286 |
| A |
7 |
10 |
3 |
0.35 |
0.32 |
0.67 |
0.99 |
0.67 |
0.99 |
0.87 |
0.38 |
0.00 |
0.64 |
172 |
| C |
13 |
12 |
5 |
0.40 |
0.40 |
0.73 |
1.13 |
0.73 |
0.95 |
0.57 |
0.88 |
0.00 |
0.80 |
150 |
| E |
10 |
14 |
5 |
0.42 |
0.29 |
0.90 |
1.19 |
0.91 |
0.98 |
1.40 |
1.23 |
0.00 |
0.91 |
962 |
| M |
11 |
14 |
8 |
0.64 |
0.03 |
0.00 |
0.03 |
0.04 |
0.07 |
-0.42 |
-0.43 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1425:1475)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
119 |
92 |
24 |
0.23 |
0.24 |
0.47 |
0.72 |
0.20 |
0.59 |
-0.30 |
-0.09 |
0.00 |
0.54 |
5415 |
| 3 |
98 |
66 |
15 |
0.18 |
0.24 |
0.49 |
0.73 |
0.17 |
0.57 |
0.33 |
0.54 |
0.00 |
0.61 |
4419 |
| B |
59 |
42 |
5 |
0.10 |
0.10 |
0.00 |
0.10 |
0.09 |
0.45 |
0.51 |
1.29 |
0.00 |
0.56 |
3285 |
| A |
11 |
7 |
4 |
0.44 |
0.36 |
0.65 |
1.01 |
0.53 |
1.00 |
0.30 |
-0.07 |
0.07 |
0.56 |
171 |
| C |
13 |
16 |
4 |
0.28 |
0.57 |
0.79 |
1.37 |
0.79 |
0.95 |
0.69 |
0.91 |
0.01 |
0.82 |
150 |
| E |
28 |
17 |
6 |
0.27 |
0.14 |
0.00 |
0.14 |
0.39 |
0.91 |
0.61 |
0.95 |
0.00 |
0.91 |
962 |
| M |
8 |
10 |
6 |
0.67 |
0.01 |
0.00 |
0.01 |
0.04 |
0.07 |
-0.40 |
-0.44 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1426:1474)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
125 |
104 |
51 |
0.45 |
0.48 |
0.66 |
1.14 |
0.30 |
0.57 |
-0.39 |
-0.23 |
0.00 |
0.55 |
5456 |
| 3 |
100 |
81 |
44 |
0.49 |
0.49 |
0.66 |
1.15 |
0.30 |
0.58 |
0.17 |
0.38 |
0.00 |
0.62 |
4460 |
| B |
69 |
58 |
29 |
0.46 |
0.40 |
0.67 |
1.07 |
0.10 |
0.45 |
0.34 |
0.60 |
0.00 |
0.57 |
3321 |
| A |
13 |
7 |
2 |
0.20 |
0.33 |
0.57 |
0.90 |
0.57 |
0.92 |
0.03 |
0.49 |
0.00 |
0.63 |
171 |
| C |
13 |
11 |
4 |
0.33 |
0.26 |
0.77 |
1.02 |
0.13 |
0.23 |
0.92 |
0.97 |
0.00 |
0.82 |
150 |
| E |
18 |
16 |
13 |
0.77 |
0.79 |
0.94 |
1.73 |
0.94 |
0.97 |
0.83 |
0.76 |
0.00 |
0.92 |
967 |
| M |
12 |
12 |
4 |
0.33 |
0.04 |
0.00 |
0.04 |
0.03 |
0.06 |
-0.43 |
-0.43 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1427:1473)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
116 |
111 |
52 |
0.46 |
0.57 |
0.76 |
1.32 |
0.76 |
0.84 |
0.08 |
-0.25 |
0.00 |
0.54 |
5404 |
| 3 |
91 |
86 |
45 |
0.51 |
0.56 |
0.76 |
1.32 |
0.76 |
0.85 |
0.69 |
0.35 |
0.00 |
0.61 |
4408 |
| B |
72 |
65 |
41 |
0.60 |
0.89 |
0.95 |
1.84 |
0.95 |
0.98 |
0.88 |
0.86 |
0.00 |
0.56 |
3277 |
| A |
10 |
11 |
3 |
0.29 |
0.54 |
0.68 |
1.22 |
0.68 |
0.92 |
0.27 |
0.40 |
0.00 |
0.59 |
162 |
| C |
16 |
14 |
3 |
0.20 |
0.24 |
0.77 |
1.01 |
0.75 |
0.84 |
1.10 |
0.84 |
0.00 |
0.82 |
150 |
| E |
9 |
10 |
2 |
0.21 |
0.73 |
0.89 |
1.61 |
0.08 |
0.37 |
0.35 |
0.42 |
0.00 |
0.87 |
968 |
| M |
9 |
11 |
4 |
0.40 |
0.03 |
0.00 |
0.03 |
0.06 |
0.06 |
-0.42 |
-0.47 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1428:1472)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
110 |
113 |
57 |
0.51 |
0.31 |
0.75 |
1.05 |
0.75 |
0.80 |
-0.14 |
0.44 |
0.01 |
0.54 |
5453 |
| 3 |
83 |
88 |
43 |
0.50 |
0.26 |
0.75 |
1.01 |
0.75 |
0.79 |
0.47 |
1.27 |
0.01 |
0.61 |
4457 |
| B |
65 |
64 |
38 |
0.59 |
0.73 |
0.96 |
1.69 |
0.96 |
0.99 |
1.33 |
1.35 |
0.00 |
0.57 |
3327 |
| A |
7 |
8 |
2 |
0.27 |
0.11 |
0.00 |
0.11 |
0.37 |
0.97 |
0.66 |
0.96 |
0.00 |
0.60 |
163 |
| C |
14 |
16 |
7 |
0.47 |
0.63 |
0.83 |
1.46 |
0.83 |
0.93 |
0.67 |
0.63 |
0.00 |
0.82 |
150 |
| E |
11 |
16 |
3 |
0.22 |
0.25 |
0.66 |
0.91 |
0.02 |
0.04 |
0.45 |
1.10 |
0.07 |
0.85 |
966 |
| M |
13 |
9 |
7 |
0.64 |
0.03 |
0.00 |
0.03 |
0.05 |
0.08 |
-0.41 |
-0.40 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1429:1471)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
61 |
60 |
33 |
0.55 |
0.90 |
0.97 |
1.87 |
0.97 |
0.98 |
0.10 |
0.05 |
0.00 |
0.55 |
5506 |
| 3 |
40 |
39 |
21 |
0.53 |
0.91 |
0.97 |
1.89 |
0.97 |
0.99 |
0.77 |
0.69 |
0.01 |
0.62 |
4510 |
| B |
22 |
21 |
11 |
0.51 |
0.79 |
0.99 |
1.78 |
0.99 |
1.00 |
1.57 |
1.53 |
0.01 |
0.57 |
3362 |
| A |
6 |
5 |
4 |
0.73 |
0.75 |
0.92 |
1.67 |
0.92 |
0.99 |
0.80 |
0.75 |
0.00 |
0.64 |
173 |
| C |
12 |
10 |
5 |
0.46 |
0.41 |
0.87 |
1.28 |
0.87 |
0.94 |
1.00 |
1.03 |
0.01 |
0.82 |
150 |
| E |
12 |
13 |
6 |
0.48 |
0.83 |
0.94 |
1.76 |
0.94 |
0.96 |
0.90 |
0.84 |
0.00 |
0.92 |
974 |
| M |
9 |
11 |
7 |
0.70 |
0.05 |
0.00 |
0.05 |
0.08 |
0.08 |
-0.40 |
-0.40 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1430:1470)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
59 |
56 |
31 |
0.54 |
0.92 |
0.97 |
1.90 |
0.97 |
0.99 |
0.04 |
-0.01 |
0.00 |
0.55 |
5521 |
| 3 |
42 |
41 |
27 |
0.65 |
0.94 |
0.98 |
1.92 |
0.98 |
0.99 |
0.70 |
0.68 |
0.00 |
0.63 |
4526 |
| B |
26 |
26 |
17 |
0.65 |
0.83 |
0.98 |
1.81 |
0.98 |
1.00 |
1.46 |
1.50 |
0.00 |
0.57 |
3373 |
| A |
5 |
4 |
4 |
0.89 |
0.99 |
0.99 |
1.98 |
0.99 |
0.99 |
0.78 |
0.82 |
0.00 |
0.64 |
173 |
| C |
9 |
8 |
3 |
0.35 |
0.66 |
0.93 |
1.58 |
0.93 |
0.97 |
1.15 |
0.95 |
0.02 |
0.80 |
149 |
| E |
11 |
11 |
6 |
0.55 |
0.82 |
0.96 |
1.78 |
0.96 |
0.98 |
1.17 |
1.03 |
0.00 |
0.93 |
979 |
| M |
8 |
7 |
3 |
0.40 |
0.01 |
0.00 |
0.01 |
0.03 |
0.03 |
-0.39 |
-0.29 |
0.00 |
0.00 |
849 |
| |
|
| Base Pair (1435:1466)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
65 |
81 |
21 |
0.29 |
0.34 |
0.84 |
1.18 |
0.84 |
0.96 |
0.53 |
0.29 |
0.01 |
0.55 |
5555 |
| 3 |
45 |
63 |
15 |
0.28 |
0.35 |
0.85 |
1.20 |
0.84 |
0.96 |
1.26 |
1.04 |
0.00 |
0.63 |
4557 |
| B |
29 |
44 |
10 |
0.27 |
0.12 |
0.00 |
0.12 |
0.92 |
0.97 |
1.62 |
1.60 |
0.00 |
0.58 |
3404 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
0.99 |
1.75 |
1.71 |
0.00 |
0.64 |
173 |
| C |
9 |
9 |
2 |
0.22 |
0.40 |
0.85 |
1.24 |
0.85 |
0.85 |
0.97 |
1.10 |
0.01 |
0.83 |
152 |
| E |
15 |
19 |
5 |
0.29 |
0.13 |
0.00 |
0.13 |
0.55 |
0.96 |
0.46 |
0.43 |
0.00 |
0.92 |
979 |
| M |
11 |
9 |
4 |
0.40 |
0.01 |
0.00 |
0.01 |
0.01 |
0.02 |
-0.27 |
-0.28 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1436:1465)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
166 |
160 |
82 |
0.50 |
0.42 |
0.57 |
1.00 |
0.30 |
0.34 |
-0.28 |
-0.48 |
0.01 |
0.55 |
5541 |
| 3 |
147 |
135 |
73 |
0.52 |
0.41 |
0.57 |
0.98 |
0.30 |
0.35 |
0.28 |
0.11 |
0.01 |
0.62 |
4543 |
| B |
121 |
112 |
66 |
0.57 |
0.56 |
0.71 |
1.27 |
0.26 |
0.27 |
0.41 |
0.20 |
0.00 |
0.58 |
3392 |
| A |
3 |
3 |
1 |
0.33 |
0.06 |
0.00 |
0.06 |
0.03 |
0.92 |
1.43 |
1.45 |
0.00 |
0.64 |
172 |
| C |
9 |
15 |
4 |
0.33 |
0.34 |
0.82 |
1.16 |
0.09 |
0.13 |
1.07 |
0.76 |
0.01 |
0.83 |
152 |
| E |
23 |
20 |
6 |
0.28 |
0.38 |
0.52 |
0.90 |
0.52 |
0.56 |
0.23 |
0.09 |
0.04 |
0.88 |
978 |
| M |
10 |
10 |
8 |
0.80 |
0.01 |
0.00 |
0.01 |
0.01 |
0.02 |
-0.29 |
-0.28 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1437:1464)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
164 |
148 |
100 |
0.64 |
0.75 |
0.89 |
1.64 |
0.89 |
0.96 |
-0.30 |
-0.22 |
0.00 |
0.56 |
5570 |
| 3 |
143 |
128 |
88 |
0.65 |
0.76 |
0.89 |
1.65 |
0.89 |
0.96 |
0.29 |
0.40 |
0.00 |
0.63 |
4572 |
| B |
99 |
93 |
64 |
0.67 |
0.90 |
0.96 |
1.87 |
0.96 |
0.99 |
0.51 |
0.58 |
0.00 |
0.58 |
3420 |
| A |
12 |
12 |
8 |
0.67 |
0.77 |
0.93 |
1.70 |
0.83 |
0.98 |
0.56 |
0.60 |
0.00 |
0.64 |
173 |
| C |
12 |
11 |
7 |
0.61 |
0.78 |
0.95 |
1.74 |
0.95 |
0.97 |
1.08 |
1.03 |
0.00 |
0.82 |
152 |
| E |
32 |
23 |
16 |
0.58 |
0.54 |
0.65 |
1.19 |
0.65 |
0.86 |
0.13 |
0.12 |
0.01 |
0.92 |
978 |
| M |
9 |
9 |
5 |
0.56 |
0.01 |
0.00 |
0.01 |
0.01 |
0.02 |
-0.28 |
-0.29 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1438:1463)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
146 |
186 |
70 |
0.42 |
0.42 |
0.64 |
1.05 |
0.64 |
0.90 |
-0.42 |
-0.23 |
0.07 |
0.48 |
5566 |
| 3 |
121 |
163 |
65 |
0.46 |
0.42 |
0.64 |
1.06 |
0.64 |
0.90 |
-0.09 |
0.36 |
0.08 |
0.55 |
4567 |
| B |
98 |
130 |
57 |
0.50 |
0.45 |
0.69 |
1.14 |
0.69 |
0.99 |
0.85 |
0.50 |
0.00 |
0.58 |
3414 |
| A |
10 |
11 |
6 |
0.57 |
0.72 |
0.92 |
1.65 |
0.92 |
0.98 |
0.68 |
0.76 |
0.01 |
0.63 |
172 |
| C |
15 |
16 |
3 |
0.19 |
0.14 |
0.00 |
0.14 |
0.60 |
0.95 |
0.62 |
0.43 |
0.01 |
0.83 |
153 |
| E |
13 |
22 |
2 |
0.11 |
0.02 |
0.00 |
0.02 |
0.02 |
0.03 |
-0.64 |
0.61 |
0.00 |
0.00 |
980 |
| M |
10 |
7 |
2 |
0.23 |
0.01 |
0.00 |
0.01 |
0.02 |
0.02 |
-0.28 |
-0.29 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1439:1462)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
171 |
198 |
98 |
0.53 |
0.50 |
0.74 |
1.24 |
0.74 |
0.81 |
-0.39 |
-0.37 |
0.00 |
0.56 |
5597 |
| 3 |
157 |
173 |
92 |
0.56 |
0.49 |
0.74 |
1.23 |
0.74 |
0.81 |
0.21 |
0.29 |
0.00 |
0.64 |
4598 |
| B |
113 |
131 |
78 |
0.64 |
0.78 |
0.92 |
1.70 |
0.92 |
0.99 |
0.52 |
0.56 |
0.00 |
0.58 |
3445 |
| A |
17 |
16 |
12 |
0.73 |
0.79 |
0.85 |
1.65 |
0.85 |
0.98 |
-0.16 |
-0.02 |
0.00 |
0.63 |
171 |
| C |
6 |
19 |
5 |
0.40 |
0.12 |
0.00 |
0.12 |
0.65 |
0.96 |
1.50 |
0.56 |
0.01 |
0.81 |
153 |
| E |
27 |
26 |
3 |
0.11 |
0.26 |
0.54 |
0.81 |
0.10 |
0.13 |
0.59 |
0.46 |
0.00 |
0.93 |
981 |
| M |
8 |
6 |
1 |
0.14 |
0.01 |
0.00 |
0.01 |
0.03 |
0.04 |
-0.29 |
-0.27 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1440:1461)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
111 |
110 |
41 |
0.37 |
0.21 |
0.72 |
0.92 |
0.24 |
0.89 |
0.03 |
0.29 |
0.00 |
0.56 |
5600 |
| 3 |
97 |
90 |
33 |
0.35 |
0.21 |
0.72 |
0.92 |
0.24 |
0.89 |
0.66 |
1.01 |
0.00 |
0.63 |
4600 |
| B |
60 |
58 |
11 |
0.19 |
0.20 |
0.87 |
1.07 |
0.10 |
0.94 |
1.30 |
1.28 |
0.00 |
0.58 |
3453 |
| A |
14 |
14 |
11 |
0.79 |
0.84 |
0.92 |
1.76 |
0.92 |
0.99 |
0.28 |
0.35 |
0.00 |
0.64 |
172 |
| C |
5 |
10 |
3 |
0.40 |
0.07 |
0.00 |
0.07 |
0.14 |
0.94 |
1.45 |
0.74 |
0.03 |
0.79 |
154 |
| E |
23 |
18 |
11 |
0.54 |
0.44 |
0.63 |
1.07 |
0.63 |
0.69 |
0.44 |
0.59 |
0.02 |
0.90 |
974 |
| M |
9 |
10 |
6 |
0.63 |
0.01 |
0.00 |
0.01 |
0.02 |
0.02 |
-0.27 |
-0.26 |
0.00 |
0.00 |
849 |
| |
|
| Base Pair (1442:1460)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
113 |
96 |
18 |
0.17 |
0.08 |
0.00 |
0.08 |
0.29 |
0.32 |
-0.38 |
-0.17 |
0.02 |
0.52 |
5635 |
| 3 |
104 |
76 |
14 |
0.16 |
0.08 |
0.00 |
0.08 |
0.29 |
0.31 |
0.15 |
0.40 |
0.00 |
0.61 |
4635 |
| B |
87 |
59 |
10 |
0.14 |
0.08 |
0.00 |
0.08 |
0.35 |
0.36 |
0.10 |
0.34 |
0.00 |
0.56 |
3464 |
| A |
11 |
11 |
4 |
0.36 |
0.51 |
0.63 |
1.14 |
0.65 |
0.98 |
-0.17 |
0.11 |
0.01 |
0.61 |
169 |
| C |
0 |
14 |
0 |
0.00 |
0.69 |
0.89 |
1.57 |
0.89 |
0.92 |
0.32 |
0.23 |
0.01 |
0.78 |
154 |
| E |
6 |
6 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.71 |
1.42 |
0.00 |
0.88 |
1001 |
| M |
9 |
6 |
5 |
0.67 |
0.01 |
0.00 |
0.01 |
0.03 |
0.04 |
-0.25 |
-0.24 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1443:1459)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
125 |
132 |
63 |
0.49 |
0.83 |
0.90 |
1.73 |
0.90 |
0.94 |
-0.67 |
-0.51 |
0.09 |
0.45 |
5676 |
| 3 |
118 |
115 |
58 |
0.50 |
0.59 |
0.73 |
1.32 |
0.73 |
0.76 |
-0.42 |
-0.09 |
0.00 |
0.00 |
4676 |
| B |
100 |
102 |
53 |
0.53 |
0.92 |
0.96 |
1.87 |
0.96 |
0.98 |
0.07 |
0.06 |
0.00 |
0.56 |
3502 |
| A |
11 |
7 |
7 |
0.78 |
0.70 |
0.82 |
1.52 |
0.62 |
1.00 |
-0.53 |
-0.53 |
0.00 |
0.50 |
173 |
| C |
0 |
11 |
0 |
0.00 |
0.65 |
0.90 |
1.55 |
0.90 |
0.98 |
0.41 |
0.49 |
0.02 |
0.73 |
153 |
| E |
7 |
6 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.18 |
0.18 |
-0.67 |
1.48 |
0.00 |
0.00 |
1000 |
| M |
7 |
6 |
5 |
0.77 |
0.01 |
0.00 |
0.01 |
0.01 |
0.02 |
-0.26 |
-0.24 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1444:1458)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
135 |
108 |
46 |
0.38 |
0.37 |
0.72 |
1.09 |
0.72 |
0.94 |
-0.29 |
-0.01 |
0.00 |
0.53 |
5708 |
| 3 |
116 |
91 |
41 |
0.40 |
0.38 |
0.74 |
1.12 |
0.74 |
0.94 |
0.13 |
0.46 |
0.00 |
0.60 |
4708 |
| B |
76 |
50 |
36 |
0.57 |
0.51 |
0.84 |
1.35 |
0.84 |
0.99 |
0.29 |
0.67 |
0.00 |
0.55 |
3533 |
| A |
9 |
4 |
2 |
0.31 |
0.42 |
0.66 |
1.08 |
0.57 |
0.99 |
-0.72 |
-0.08 |
0.00 |
0.49 |
172 |
| C |
13 |
8 |
2 |
0.19 |
0.19 |
0.00 |
0.19 |
0.59 |
0.98 |
0.39 |
0.69 |
0.03 |
0.72 |
154 |
| E |
31 |
37 |
4 |
0.12 |
0.16 |
0.00 |
0.16 |
0.40 |
0.74 |
0.17 |
0.53 |
0.01 |
0.88 |
1002 |
| M |
6 |
9 |
3 |
0.40 |
0.01 |
0.00 |
0.01 |
0.01 |
0.01 |
-0.25 |
-0.25 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1445:1457)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
137 |
130 |
25 |
0.19 |
0.14 |
0.00 |
0.14 |
0.30 |
0.86 |
-0.28 |
-0.00 |
0.02 |
0.51 |
5673 |
| 3 |
129 |
108 |
20 |
0.17 |
0.13 |
0.00 |
0.13 |
0.30 |
0.87 |
0.20 |
0.47 |
0.00 |
0.59 |
4673 |
| B |
85 |
76 |
10 |
0.12 |
0.09 |
0.00 |
0.09 |
0.26 |
0.97 |
0.66 |
0.85 |
0.00 |
0.55 |
3500 |
| A |
4 |
4 |
3 |
0.75 |
0.92 |
0.98 |
1.90 |
0.98 |
0.99 |
-0.36 |
-0.36 |
0.00 |
0.39 |
171 |
| C |
0 |
12 |
0 |
0.00 |
0.17 |
0.00 |
0.17 |
0.19 |
0.97 |
0.56 |
0.74 |
0.00 |
0.74 |
154 |
| E |
40 |
28 |
7 |
0.21 |
0.20 |
0.00 |
0.20 |
0.35 |
0.49 |
-0.12 |
0.05 |
0.00 |
0.89 |
1001 |
| M |
8 |
10 |
5 |
0.56 |
0.01 |
0.00 |
0.01 |
0.03 |
0.03 |
-0.25 |
-0.26 |
0.00 |
0.00 |
849 |
| |
|
| Base Pair (1448:1455)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
71 |
72 |
28 |
0.39 |
0.31 |
0.83 |
1.14 |
0.83 |
0.88 |
0.03 |
0.01 |
0.00 |
0.54 |
5713 |
| 3 |
57 |
65 |
24 |
0.39 |
0.30 |
0.82 |
1.13 |
0.82 |
0.88 |
0.53 |
0.51 |
0.00 |
0.61 |
4713 |
| B |
13 |
26 |
11 |
0.56 |
0.77 |
0.99 |
1.76 |
0.99 |
0.99 |
1.46 |
1.41 |
0.00 |
0.58 |
3536 |
| A |
2 |
0 |
0 |
0.00 |
0.20 |
0.00 |
0.20 |
0.88 |
1.00 |
-0.44 |
-0.36 |
0.00 |
0.12 |
172 |
| C |
5 |
2 |
0 |
0.00 |
0.33 |
0.99 |
1.32 |
0.99 |
0.99 |
1.20 |
1.20 |
0.00 |
0.76 |
154 |
| E |
42 |
39 |
13 |
0.32 |
0.21 |
0.37 |
0.58 |
0.22 |
0.46 |
-0.26 |
0.08 |
0.01 |
0.88 |
1004 |
| M |
9 |
5 |
4 |
0.57 |
0.02 |
0.00 |
0.02 |
0.03 |
0.03 |
-0.26 |
-0.26 |
0.00 |
0.00 |
849 |
| |
| Base Pair (1449:1454)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
103 |
95 |
44 |
0.44 |
0.26 |
0.80 |
1.06 |
0.80 |
0.82 |
-0.18 |
-0.03 |
0.02 |
0.48 |
5707 |
| 3 |
97 |
86 |
42 |
0.46 |
0.25 |
0.81 |
1.06 |
0.81 |
0.83 |
0.25 |
0.36 |
0.00 |
0.56 |
4707 |
| B |
48 |
42 |
29 |
0.64 |
0.71 |
0.98 |
1.70 |
0.98 |
0.99 |
0.93 |
0.99 |
0.01 |
0.52 |
3534 |
| A |
0 |
0 |
0 |
0.00 |
0.03 |
0.00 |
0.03 |
0.10 |
0.10 |
-0.37 |
-0.37 |
0.00 |
0.00 |
172 |
| C |
2 |
4 |
0 |
0.00 |
0.80 |
0.98 |
1.78 |
0.98 |
1.00 |
0.94 |
0.87 |
0.02 |
0.74 |
154 |
| E |
49 |
44 |
13 |
0.28 |
0.28 |
0.43 |
0.72 |
0.20 |
0.27 |
-0.26 |
-0.21 |
0.00 |
0.87 |
1000 |
| M |
4 |
5 |
2 |
0.44 |
0.01 |
0.00 |
0.01 |
0.02 |
0.03 |
-0.26 |
-0.23 |
0.00 |
0.00 |
849 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)