16S rRNA Model Base Pair Collective Scoring Data for Helical Element 1506
| Base Pair (1506:1529)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
7 |
19 |
0 |
0.00 |
0.01 |
0.00 |
0.01 |
0.05 |
0.99 |
1.90 |
1.58 |
0.00 |
0.26 |
2260 |
| 3 |
6 |
8 |
0 |
0.00 |
0.03 |
0.00 |
0.03 |
0.01 |
0.99 |
1.88 |
1.80 |
0.00 |
0.20 |
1484 |
| B |
3 |
5 |
0 |
0.00 |
0.08 |
0.00 |
0.08 |
0.00 |
0.98 |
1.92 |
1.86 |
0.00 |
0.12 |
718 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.95 |
2.00 |
1.71 |
0.00 |
0.30 |
80 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.59 |
108 |
| E |
3 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.03 |
1.00 |
1.83 |
1.80 |
0.01 |
0.64 |
684 |
| M |
1 |
10 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.16 |
0.99 |
1.99 |
1.27 |
0.00 |
0.58 |
672 |
| |
| Base Pair (1507:1528)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
24 |
25 |
9 |
0.37 |
0.86 |
0.96 |
1.82 |
0.96 |
0.97 |
1.10 |
0.91 |
0.00 |
0.27 |
2287 |
| 3 |
16 |
18 |
6 |
0.35 |
0.90 |
0.96 |
1.85 |
0.96 |
0.96 |
0.97 |
0.80 |
0.00 |
0.21 |
1510 |
| B |
4 |
9 |
1 |
0.15 |
0.06 |
0.00 |
0.06 |
0.98 |
0.98 |
1.94 |
1.83 |
0.00 |
0.13 |
747 |
| A |
2 |
2 |
2 |
1.00 |
0.80 |
0.99 |
1.79 |
0.99 |
0.99 |
1.64 |
1.66 |
0.00 |
0.30 |
80 |
| C |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.94 |
2.00 |
0.00 |
0.59 |
108 |
| E |
10 |
7 |
3 |
0.35 |
0.47 |
0.93 |
1.40 |
0.93 |
0.93 |
1.31 |
1.39 |
0.01 |
0.64 |
681 |
| M |
6 |
7 |
3 |
0.46 |
0.69 |
0.98 |
1.67 |
0.96 |
0.99 |
1.74 |
1.70 |
0.00 |
0.58 |
673 |
| |
| Base Pair (1508:1527)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
57 |
48 |
20 |
0.38 |
0.94 |
0.96 |
1.90 |
0.96 |
0.97 |
0.38 |
0.26 |
0.00 |
0.27 |
2294 |
| 3 |
35 |
30 |
7 |
0.21 |
0.90 |
0.95 |
1.85 |
0.95 |
0.96 |
0.60 |
0.57 |
0.00 |
0.21 |
1530 |
| B |
26 |
21 |
3 |
0.13 |
0.65 |
0.91 |
1.56 |
0.91 |
0.93 |
0.95 |
0.90 |
0.00 |
0.13 |
758 |
| A |
3 |
1 |
0 |
0.00 |
0.50 |
0.95 |
1.45 |
0.95 |
0.96 |
1.53 |
1.55 |
0.00 |
0.30 |
80 |
| C |
9 |
7 |
2 |
0.25 |
0.56 |
0.93 |
1.49 |
0.93 |
0.97 |
1.37 |
1.35 |
0.00 |
0.53 |
96 |
| E |
6 |
8 |
5 |
0.71 |
0.79 |
0.98 |
1.77 |
0.98 |
0.99 |
1.55 |
1.42 |
0.01 |
0.65 |
690 |
| M |
13 |
11 |
11 |
0.92 |
0.96 |
1.00 |
1.96 |
1.00 |
1.00 |
1.38 |
1.38 |
0.00 |
0.58 |
672 |
| |
| Base Pair (1509:1526)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
30 |
28 |
7 |
0.24 |
0.90 |
0.97 |
1.87 |
0.97 |
0.98 |
1.10 |
0.97 |
0.00 |
0.28 |
2372 |
| 3 |
14 |
9 |
0 |
0.00 |
0.15 |
0.00 |
0.15 |
0.98 |
0.98 |
1.82 |
1.77 |
0.00 |
0.22 |
1592 |
| B |
11 |
7 |
0 |
0.00 |
0.09 |
0.00 |
0.09 |
0.97 |
0.98 |
1.85 |
1.74 |
0.00 |
0.14 |
805 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
2.00 |
1.90 |
0.00 |
0.30 |
80 |
| C |
1 |
4 |
1 |
0.40 |
0.50 |
0.95 |
1.46 |
0.95 |
0.96 |
1.67 |
1.40 |
0.00 |
0.60 |
110 |
| E |
3 |
2 |
0 |
0.00 |
0.23 |
0.98 |
1.22 |
0.98 |
0.98 |
1.77 |
1.83 |
0.01 |
0.66 |
705 |
| M |
15 |
15 |
6 |
0.40 |
0.72 |
0.97 |
1.69 |
0.97 |
0.99 |
1.36 |
1.32 |
0.00 |
0.58 |
674 |
| |
| Base Pair (1510:1525)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
65 |
84 |
33 |
0.44 |
0.45 |
0.79 |
1.24 |
0.79 |
0.81 |
1.15 |
0.77 |
0.00 |
0.28 |
2380 |
| 3 |
17 |
26 |
2 |
0.09 |
0.15 |
0.00 |
0.15 |
0.73 |
0.75 |
1.56 |
0.96 |
0.00 |
0.22 |
1603 |
| B |
9 |
10 |
2 |
0.21 |
0.20 |
0.00 |
0.20 |
0.96 |
0.98 |
1.64 |
1.73 |
0.00 |
0.14 |
815 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.91 |
2.00 |
0.00 |
0.30 |
80 |
| C |
3 |
5 |
1 |
0.25 |
0.55 |
0.95 |
1.50 |
0.94 |
0.96 |
1.59 |
1.32 |
0.00 |
0.60 |
110 |
| E |
7 |
16 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.45 |
0.45 |
1.44 |
0.95 |
0.01 |
0.66 |
706 |
| M |
45 |
53 |
30 |
0.61 |
0.75 |
0.87 |
1.63 |
0.87 |
0.94 |
0.79 |
0.53 |
0.00 |
0.58 |
671 |
| |
| Base Pair (1511:1524)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
36 |
75 |
12 |
0.22 |
0.46 |
0.90 |
1.36 |
0.90 |
0.98 |
1.24 |
1.04 |
0.01 |
0.28 |
2480 |
| 3 |
7 |
23 |
1 |
0.07 |
0.11 |
0.00 |
0.11 |
0.93 |
0.98 |
1.55 |
1.35 |
0.01 |
0.23 |
1707 |
| B |
6 |
17 |
1 |
0.09 |
0.17 |
0.00 |
0.17 |
0.92 |
0.98 |
1.39 |
1.19 |
0.01 |
0.14 |
917 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
1.00 |
2.00 |
1.83 |
0.00 |
0.30 |
80 |
| C |
2 |
7 |
1 |
0.22 |
0.08 |
0.00 |
0.08 |
0.78 |
0.98 |
1.76 |
1.06 |
0.00 |
0.57 |
103 |
| E |
1 |
5 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.94 |
0.99 |
1.89 |
1.62 |
0.00 |
0.67 |
708 |
| M |
27 |
45 |
10 |
0.28 |
0.63 |
0.83 |
1.45 |
0.83 |
0.98 |
0.83 |
0.75 |
0.00 |
0.58 |
674 |
| |
| Base Pair (1512:1523)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
18 |
19 |
4 |
0.22 |
0.05 |
0.00 |
0.05 |
0.01 |
0.98 |
1.85 |
1.74 |
0.00 |
0.29 |
2528 |
| 3 |
6 |
14 |
2 |
0.20 |
0.03 |
0.00 |
0.03 |
0.01 |
0.97 |
1.89 |
1.69 |
0.00 |
0.24 |
1743 |
| B |
6 |
9 |
2 |
0.27 |
0.08 |
0.00 |
0.08 |
0.00 |
0.98 |
1.89 |
1.78 |
0.00 |
0.16 |
948 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.05 |
1.00 |
2.00 |
1.75 |
0.00 |
0.31 |
82 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.63 |
114 |
| E |
0 |
4 |
0 |
0.00 |
0.03 |
0.00 |
0.03 |
0.00 |
0.95 |
1.91 |
1.63 |
0.00 |
0.67 |
710 |
| M |
12 |
5 |
2 |
0.23 |
0.14 |
0.00 |
0.14 |
0.03 |
0.99 |
1.76 |
1.89 |
0.00 |
0.58 |
675 |
| |
| Base Pair (1513:1522)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
19 |
18 |
6 |
0.32 |
0.53 |
0.98 |
1.52 |
0.98 |
0.98 |
1.76 |
1.72 |
0.00 |
0.30 |
2571 |
| 3 |
12 |
9 |
2 |
0.19 |
0.51 |
0.98 |
1.49 |
0.98 |
0.98 |
1.73 |
1.68 |
0.00 |
0.25 |
1786 |
| B |
10 |
9 |
2 |
0.21 |
0.13 |
0.00 |
0.13 |
0.97 |
0.98 |
1.83 |
1.77 |
0.00 |
0.17 |
984 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.31 |
82 |
| C |
2 |
3 |
1 |
0.40 |
0.67 |
0.98 |
1.65 |
0.98 |
0.99 |
1.74 |
1.61 |
0.00 |
0.63 |
114 |
| E |
2 |
0 |
0 |
0.00 |
0.78 |
0.99 |
1.76 |
0.99 |
0.99 |
1.61 |
1.60 |
0.00 |
0.68 |
717 |
| M |
5 |
6 |
3 |
0.55 |
0.60 |
0.99 |
1.59 |
0.99 |
0.99 |
1.88 |
1.89 |
0.00 |
0.58 |
675 |
| |
| Base Pair (1514:1521)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
51 |
34 |
23 |
0.54 |
0.81 |
0.90 |
1.71 |
0.90 |
0.99 |
0.57 |
0.82 |
0.00 |
0.32 |
2718 |
| 3 |
35 |
19 |
11 |
0.41 |
0.62 |
0.87 |
1.49 |
0.87 |
0.99 |
0.64 |
0.95 |
0.00 |
0.27 |
1933 |
| B |
33 |
17 |
9 |
0.36 |
0.63 |
0.78 |
1.41 |
0.78 |
0.99 |
0.44 |
0.88 |
0.00 |
0.19 |
1130 |
| A |
0 |
0 |
0 |
0.00 |
0.33 |
0.95 |
1.28 |
0.95 |
0.95 |
1.63 |
1.75 |
0.00 |
0.31 |
83 |
| C |
2 |
1 |
1 |
0.67 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.93 |
2.00 |
0.00 |
0.63 |
114 |
| E |
2 |
2 |
2 |
1.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.93 |
1.90 |
0.00 |
0.68 |
717 |
| M |
14 |
14 |
11 |
0.79 |
0.85 |
0.98 |
1.83 |
0.98 |
0.99 |
1.35 |
1.25 |
0.01 |
0.58 |
675 |
| |
| Base Pair (1515:1520)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
67 |
69 |
45 |
0.66 |
0.85 |
0.92 |
1.77 |
0.92 |
0.99 |
0.36 |
0.22 |
0.01 |
0.32 |
2793 |
| 3 |
32 |
29 |
22 |
0.72 |
0.89 |
0.96 |
1.85 |
0.96 |
0.98 |
0.72 |
0.67 |
0.00 |
0.27 |
2007 |
| B |
27 |
26 |
20 |
0.76 |
0.94 |
0.97 |
1.91 |
0.97 |
0.97 |
0.59 |
0.64 |
0.00 |
0.20 |
1202 |
| A |
1 |
1 |
0 |
0.00 |
0.22 |
0.58 |
0.81 |
0.58 |
1.00 |
1.39 |
0.88 |
0.00 |
0.32 |
84 |
| C |
4 |
2 |
1 |
0.33 |
0.17 |
0.00 |
0.17 |
0.05 |
1.00 |
1.68 |
1.93 |
0.00 |
0.63 |
114 |
| E |
4 |
2 |
2 |
0.67 |
0.20 |
0.00 |
0.20 |
0.99 |
1.00 |
1.80 |
1.82 |
0.00 |
0.66 |
718 |
| M |
31 |
38 |
22 |
0.64 |
0.91 |
0.95 |
1.86 |
0.95 |
1.00 |
0.64 |
0.04 |
0.07 |
0.54 |
676 |
| |
Last generated : Fri Jun 16 2000 (14 : 29 )