16S rRNA Model Base Pair Collective Scoring Data for Helical Element 289
| Base Pair (289:311)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
60 |
65 |
43 |
0.69 |
0.94 |
0.99 |
1.93 |
0.99 |
0.99 |
0.96 |
0.95 |
0.00 |
0.85 |
7244 |
| 3 |
47 |
49 |
34 |
0.71 |
0.95 |
0.99 |
1.94 |
0.99 |
0.99 |
0.94 |
0.92 |
0.00 |
0.87 |
6254 |
| B |
42 |
44 |
29 |
0.67 |
0.82 |
0.98 |
1.81 |
0.98 |
0.99 |
1.52 |
1.49 |
0.00 |
0.85 |
5006 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.10 |
1.11 |
0.00 |
0.85 |
224 |
| C |
7 |
7 |
5 |
0.71 |
0.95 |
0.99 |
1.95 |
0.99 |
1.00 |
1.35 |
1.34 |
0.00 |
0.91 |
166 |
| E |
2 |
2 |
2 |
1.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.99 |
1.95 |
0.00 |
0.97 |
1024 |
| M |
6 |
9 |
4 |
0.53 |
0.56 |
0.99 |
1.55 |
0.99 |
0.99 |
1.47 |
1.48 |
0.01 |
0.68 |
832 |
| |
| Base Pair (290:310)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
57 |
62 |
32 |
0.54 |
0.91 |
0.98 |
1.88 |
0.98 |
0.98 |
1.04 |
1.01 |
0.00 |
0.85 |
7276 |
| 3 |
22 |
24 |
18 |
0.78 |
0.96 |
0.99 |
1.96 |
0.99 |
0.99 |
1.14 |
1.14 |
0.00 |
0.88 |
6285 |
| B |
18 |
19 |
14 |
0.76 |
0.87 |
0.99 |
1.86 |
0.99 |
0.99 |
1.63 |
1.63 |
0.00 |
0.86 |
5037 |
| A |
2 |
3 |
2 |
0.80 |
0.31 |
0.95 |
1.26 |
0.95 |
0.97 |
1.81 |
1.59 |
0.00 |
0.86 |
227 |
| C |
7 |
4 |
3 |
0.55 |
0.36 |
0.96 |
1.32 |
0.96 |
1.00 |
1.65 |
1.84 |
0.00 |
0.92 |
167 |
| E |
2 |
2 |
2 |
1.00 |
1.00 |
0.00 |
1.00 |
1.00 |
1.00 |
1.98 |
1.99 |
0.00 |
0.97 |
1021 |
| M |
28 |
34 |
11 |
0.35 |
0.51 |
0.86 |
1.37 |
0.86 |
0.88 |
0.92 |
0.82 |
0.02 |
0.68 |
832 |
| |
| Base Pair (291:309)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
50 |
50 |
46 |
0.92 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
-0.19 |
-0.11 |
0.02 |
0.77 |
7325 |
| 3 |
45 |
45 |
43 |
0.96 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
0.40 |
0.40 |
0.00 |
0.88 |
6295 |
| B |
42 |
42 |
40 |
0.95 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
0.64 |
0.64 |
0.00 |
0.86 |
5040 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
0.98 |
2.00 |
1.85 |
0.00 |
0.87 |
230 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.92 |
167 |
| E |
3 |
3 |
3 |
1.00 |
0.91 |
1.00 |
1.91 |
1.00 |
1.00 |
1.90 |
1.92 |
0.00 |
0.97 |
1025 |
| M |
5 |
5 |
3 |
0.60 |
0.06 |
0.00 |
0.06 |
0.11 |
0.11 |
-0.37 |
-0.46 |
0.00 |
0.00 |
871 |
| |
| Base Pair (292:308)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
24 |
16 |
6 |
0.30 |
0.43 |
0.91 |
1.34 |
0.91 |
0.99 |
0.81 |
0.72 |
0.02 |
0.76 |
7204 |
| 3 |
19 |
12 |
2 |
0.13 |
0.43 |
0.90 |
1.33 |
0.90 |
0.99 |
1.55 |
1.33 |
0.00 |
0.86 |
6174 |
| B |
4 |
4 |
1 |
0.25 |
0.33 |
0.99 |
1.33 |
0.99 |
1.00 |
1.93 |
1.95 |
0.00 |
0.84 |
4920 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.87 |
229 |
| C |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.95 |
2.00 |
0.00 |
0.92 |
167 |
| E |
15 |
8 |
1 |
0.09 |
0.03 |
0.00 |
0.03 |
0.44 |
0.95 |
0.87 |
1.76 |
0.00 |
0.97 |
1025 |
| M |
4 |
4 |
4 |
1.00 |
0.01 |
0.00 |
0.01 |
0.10 |
0.11 |
-0.31 |
-0.37 |
0.00 |
0.00 |
871 |
| |
|
| Base Pair (293:304)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
82 |
105 |
25 |
0.27 |
0.18 |
0.00 |
0.18 |
0.51 |
0.99 |
0.27 |
0.12 |
0.00 |
0.77 |
7342 |
| 3 |
69 |
87 |
20 |
0.26 |
0.18 |
0.00 |
0.18 |
0.51 |
0.99 |
0.82 |
0.66 |
0.00 |
0.88 |
6312 |
| B |
59 |
75 |
13 |
0.19 |
0.09 |
0.00 |
0.09 |
0.40 |
0.99 |
1.04 |
1.08 |
0.00 |
0.86 |
5059 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.00 |
1.00 |
0.00 |
0.87 |
229 |
| C |
7 |
11 |
1 |
0.11 |
0.04 |
0.00 |
0.04 |
0.28 |
0.99 |
1.51 |
1.16 |
0.00 |
0.92 |
167 |
| E |
7 |
9 |
4 |
0.50 |
0.84 |
0.96 |
1.80 |
0.96 |
1.00 |
0.98 |
0.87 |
0.00 |
0.97 |
1024 |
| M |
6 |
7 |
4 |
0.61 |
0.03 |
0.00 |
0.03 |
0.07 |
0.10 |
-0.41 |
-0.45 |
0.00 |
0.00 |
871 |
| |
| Base Pair (294:303)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
91 |
85 |
75 |
0.85 |
0.94 |
0.97 |
1.91 |
0.97 |
1.00 |
-0.16 |
-0.11 |
0.00 |
0.77 |
7365 |
| 3 |
85 |
79 |
71 |
0.87 |
0.94 |
0.97 |
1.91 |
0.97 |
1.00 |
0.35 |
0.40 |
0.00 |
0.88 |
6335 |
| B |
58 |
57 |
49 |
0.85 |
0.97 |
0.98 |
1.95 |
0.98 |
1.00 |
0.65 |
0.65 |
0.00 |
0.87 |
5082 |
| A |
11 |
11 |
11 |
1.00 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
0.74 |
0.74 |
0.00 |
0.87 |
229 |
| C |
1 |
2 |
1 |
0.67 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.87 |
1.87 |
0.00 |
0.92 |
167 |
| E |
16 |
11 |
11 |
0.81 |
0.65 |
0.88 |
1.53 |
0.88 |
1.00 |
0.64 |
1.08 |
0.00 |
0.97 |
1024 |
| M |
5 |
4 |
3 |
0.67 |
0.05 |
0.00 |
0.05 |
0.10 |
0.11 |
-0.42 |
-0.40 |
0.00 |
0.00 |
871 |
| |
| Base Pair (295:302)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
82 |
53 |
44 |
0.65 |
0.85 |
0.96 |
1.81 |
0.96 |
1.00 |
0.20 |
0.34 |
0.00 |
0.77 |
7363 |
| 3 |
65 |
41 |
37 |
0.70 |
0.87 |
0.96 |
1.83 |
0.96 |
1.00 |
0.76 |
0.90 |
0.00 |
0.88 |
6330 |
| B |
48 |
23 |
20 |
0.56 |
0.50 |
0.96 |
1.46 |
0.96 |
1.00 |
1.51 |
1.69 |
0.00 |
0.86 |
5075 |
| A |
10 |
11 |
10 |
0.95 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.75 |
0.75 |
0.00 |
0.88 |
231 |
| C |
9 |
5 |
0 |
0.00 |
0.29 |
0.76 |
1.05 |
0.76 |
1.00 |
1.09 |
1.49 |
0.01 |
0.93 |
170 |
| E |
7 |
7 |
7 |
1.00 |
0.98 |
1.00 |
1.98 |
1.00 |
1.00 |
1.12 |
1.14 |
0.00 |
0.97 |
1024 |
| M |
8 |
7 |
7 |
0.93 |
0.03 |
0.00 |
0.03 |
0.11 |
0.11 |
-0.40 |
-0.41 |
0.00 |
0.00 |
871 |
| |
| Base Pair (296:301)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
16 |
11 |
4 |
0.30 |
0.18 |
0.00 |
0.18 |
0.02 |
1.00 |
1.20 |
1.25 |
0.00 |
0.78 |
7377 |
| 3 |
8 |
7 |
4 |
0.53 |
0.31 |
0.99 |
1.30 |
0.01 |
1.00 |
1.93 |
1.94 |
0.00 |
0.88 |
6344 |
| B |
3 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
1.94 |
1.96 |
0.00 |
0.87 |
5088 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
2.00 |
1.93 |
0.00 |
0.88 |
231 |
| C |
6 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.24 |
1.00 |
1.20 |
2.00 |
0.00 |
0.93 |
170 |
| E |
5 |
5 |
4 |
0.80 |
0.91 |
1.00 |
1.90 |
0.02 |
1.00 |
1.85 |
1.85 |
0.00 |
0.97 |
1025 |
| M |
2 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.10 |
-0.31 |
-0.34 |
0.00 |
0.00 |
871 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)