16S rRNA Model Base Pair Collective Scoring Data for Helical Element 316
| Base Pair (316:337)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
95 |
85 |
56 |
0.62 |
0.80 |
0.92 |
1.73 |
0.92 |
1.00 |
-0.07 |
0.05 |
0.00 |
0.76 |
7399 |
| 3 |
81 |
69 |
46 |
0.61 |
0.80 |
0.92 |
1.72 |
0.92 |
1.00 |
0.50 |
0.65 |
0.00 |
0.87 |
6247 |
| B |
72 |
59 |
37 |
0.56 |
0.62 |
0.90 |
1.52 |
0.90 |
1.00 |
0.95 |
1.17 |
0.00 |
0.85 |
5003 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.29 |
1.28 |
0.00 |
0.84 |
222 |
| C |
6 |
6 |
4 |
0.67 |
0.73 |
0.98 |
1.71 |
0.98 |
1.00 |
1.53 |
1.62 |
0.00 |
0.91 |
166 |
| E |
7 |
8 |
7 |
0.93 |
0.80 |
0.99 |
1.78 |
0.99 |
1.00 |
1.70 |
1.66 |
0.00 |
0.97 |
1022 |
| M |
8 |
10 |
6 |
0.67 |
0.04 |
0.00 |
0.04 |
0.10 |
0.10 |
-0.42 |
-0.40 |
0.00 |
0.00 |
994 |
| |
| Base Pair (317:336)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
44 |
46 |
36 |
0.80 |
0.96 |
0.99 |
1.95 |
0.99 |
1.00 |
0.49 |
0.41 |
0.00 |
0.72 |
6988 |
| 3 |
35 |
37 |
28 |
0.78 |
0.97 |
0.99 |
1.96 |
0.99 |
1.00 |
1.15 |
1.11 |
0.00 |
0.81 |
5836 |
| B |
28 |
27 |
21 |
0.76 |
0.77 |
0.99 |
1.76 |
0.99 |
1.00 |
1.72 |
1.74 |
0.00 |
0.79 |
4606 |
| A |
2 |
4 |
2 |
0.67 |
0.42 |
0.97 |
1.38 |
0.97 |
0.98 |
1.85 |
1.60 |
0.00 |
0.80 |
212 |
| C |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.71 |
1.71 |
0.00 |
0.91 |
166 |
| E |
5 |
6 |
5 |
0.91 |
0.86 |
1.00 |
1.85 |
1.00 |
1.00 |
1.84 |
1.82 |
0.00 |
0.97 |
1018 |
| M |
6 |
6 |
5 |
0.83 |
0.01 |
0.00 |
0.01 |
0.08 |
0.10 |
-0.38 |
-0.37 |
0.00 |
0.00 |
994 |
| |
| Base Pair (318:335)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
15 |
28 |
8 |
0.37 |
0.02 |
0.00 |
0.02 |
0.84 |
0.84 |
1.19 |
0.61 |
0.00 |
0.74 |
7174 |
| 3 |
8 |
21 |
1 |
0.07 |
0.01 |
0.00 |
0.01 |
0.83 |
0.83 |
1.96 |
1.29 |
0.00 |
0.84 |
6022 |
| B |
5 |
13 |
1 |
0.11 |
0.14 |
0.00 |
0.14 |
0.99 |
1.00 |
1.96 |
1.92 |
0.00 |
0.81 |
4779 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.88 |
231 |
| C |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.87 |
1.87 |
0.00 |
0.91 |
166 |
| E |
3 |
8 |
0 |
0.00 |
0.06 |
0.00 |
0.06 |
0.03 |
0.03 |
1.93 |
1.79 |
0.00 |
0.96 |
1012 |
| M |
5 |
5 |
5 |
1.00 |
0.01 |
0.00 |
0.01 |
0.10 |
0.10 |
-0.40 |
-0.33 |
0.00 |
0.00 |
994 |
| |
| Base Pair (319:334)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
28 |
21 |
0.82 |
0.97 |
0.99 |
1.96 |
0.99 |
1.00 |
0.60 |
0.59 |
0.00 |
0.77 |
7474 |
| 3 |
18 |
22 |
17 |
0.85 |
0.97 |
0.99 |
1.97 |
0.99 |
1.00 |
1.28 |
1.26 |
0.00 |
0.88 |
6322 |
| B |
4 |
7 |
3 |
0.55 |
0.25 |
1.00 |
1.25 |
1.00 |
1.00 |
1.97 |
1.96 |
0.00 |
0.86 |
5069 |
| A |
8 |
9 |
8 |
0.94 |
0.94 |
0.97 |
1.90 |
0.97 |
0.97 |
0.69 |
0.57 |
0.00 |
0.87 |
230 |
| C |
1 |
3 |
1 |
0.50 |
0.22 |
0.96 |
1.18 |
0.96 |
0.96 |
1.91 |
1.65 |
0.00 |
0.91 |
166 |
| E |
6 |
6 |
6 |
1.00 |
0.84 |
1.00 |
1.84 |
1.00 |
1.00 |
1.81 |
1.82 |
0.00 |
0.97 |
1023 |
| M |
4 |
3 |
3 |
0.86 |
0.02 |
0.00 |
0.02 |
0.10 |
0.10 |
-0.43 |
-0.35 |
0.00 |
0.00 |
994 |
| |
| Base Pair (320:333)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
113 |
119 |
102 |
0.88 |
0.96 |
0.99 |
1.95 |
0.99 |
0.99 |
0.18 |
0.17 |
0.00 |
0.77 |
7437 |
| 3 |
94 |
99 |
85 |
0.88 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.79 |
0.78 |
0.00 |
0.87 |
6285 |
| B |
83 |
86 |
74 |
0.88 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.77 |
0.75 |
0.00 |
0.86 |
5035 |
| A |
10 |
10 |
10 |
1.00 |
0.97 |
0.98 |
1.95 |
0.98 |
0.98 |
0.15 |
0.15 |
0.00 |
0.87 |
229 |
| C |
9 |
10 |
8 |
0.84 |
0.77 |
0.94 |
1.71 |
0.94 |
0.96 |
1.20 |
1.00 |
0.01 |
0.91 |
166 |
| E |
1 |
3 |
0 |
0.00 |
0.12 |
0.00 |
0.12 |
0.99 |
0.99 |
1.94 |
1.96 |
0.00 |
0.97 |
1021 |
| M |
10 |
10 |
9 |
0.90 |
0.03 |
0.00 |
0.03 |
0.10 |
0.10 |
-0.41 |
-0.41 |
0.00 |
0.00 |
994 |
| |
| Base Pair (321:332) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
20 |
18 |
4 |
0.21 |
0.10 |
0.00 |
0.10 |
0.18 |
0.18 |
0.54 |
1.06 |
0.00 |
0.77 |
7470 |
| 3 |
14 |
12 |
3 |
0.23 |
0.09 |
0.00 |
0.09 |
0.18 |
0.18 |
1.23 |
1.84 |
0.00 |
0.88 |
6318 |
| B |
7 |
6 |
0 |
0.00 |
0.04 |
0.00 |
0.04 |
0.00 |
0.00 |
1.97 |
1.95 |
0.00 |
0.86 |
5065 |
| A |
5 |
4 |
3 |
0.67 |
0.78 |
0.87 |
1.65 |
0.55 |
0.55 |
0.54 |
0.89 |
0.00 |
0.86 |
228 |
| C |
0 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
2.00 |
1.91 |
0.00 |
0.91 |
166 |
| E |
2 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.99 |
1.98 |
0.00 |
0.97 |
1025 |
| M |
6 |
4 |
1 |
0.20 |
0.03 |
0.00 |
0.03 |
0.03 |
0.03 |
-0.39 |
-0.44 |
0.00 |
0.00 |
994 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)