16S rRNA Model Base Pair Collective Scoring Data for Helical Element 505


Base Pair (505:526)   (Tertiary) Frequencies
Aln Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
T 13 17 8 0.53 0.37 0.99 1.36 0.99 1.00 1.91 1.88 0.00 0.76 6520
3 6 7 3 0.46 0.30 0.99 1.29 0.99 1.00 1.92 1.90 0.00 0.77 5536
B 6 7 3 0.46 0.32 0.99 1.31 0.99 1.00 1.90 1.88 0.00 0.74 4329
A 0 0 0 0.00 0.00 0.00 0.00 0.99 0.99 2.00 1.96 0.00 0.78 205
C 1 2 0 0.00 1.00 1.00 2.00 1.00 1.00 1.95 1.78 0.00 0.89 161
E 0 0 0 0.00 0.00 0.00 0.00 1.00 1.00 2.00 1.97 0.00 0.95 1002
M 6 8 5 0.71 0.42 0.98 1.40 0.98 1.00 1.87 1.78 0.00 0.72 831
 
Base Pair (506:525)   (Tertiary) Frequencies
Aln Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
T 25 19 14 0.64 0.60 0.99 1.59 0.99 0.99 1.82 1.86 0.00 0.77 6563
3 9 3 1 0.17 0.26 0.99 1.25 0.99 0.99 1.90 1.94 0.00 0.78 5579
B 5 3 1 0.25 0.52 1.00 1.51 1.00 1.00 1.93 1.93 0.00 0.74 4377
A 0 0 0 0.00 0.00 0.00 0.00 1.00 1.00 2.00 2.00 0.00 0.77 204
C 0 1 0 0.00 0.67 0.99 1.66 0.99 1.00 1.90 1.85 0.00 0.88 160
E 4 0 0 0.00 0.00 0.00 0.00 0.97 0.97 1.77 1.99 0.00 0.94 998
M 16 15 13 0.84 0.85 0.98 1.84 0.98 0.99 1.43 1.48 0.00 0.72 832
 
Base Pair (507:524)   (Tertiary) Frequencies
Aln Xch Ych PE PES Cov1 Cov3 C1+C3 WC WCGU XCons YCons DfDel PNuc Seq
T 31 36 11 0.33 0.85 0.98 1.83 0.98 0.99 1.51 1.49 0.00 0.77 6527
3 15 10 0 0.00 0.04 0.00 0.04 0.99 0.99 1.91 1.90 0.00 0.77 5544
B 7 7 0 0.00 0.00 0.00 0.00 0.99 0.99 1.94 1.93 0.00 0.74 4344
A 6 0 0 0.00 0.00 0.00 0.00 0.94 0.98 1.61 2.00 0.00 0.76 201
C 0 0 0 0.00 0.00 0.00 0.00 1.00 1.00 2.00 2.00 0.00 0.88 160
E 2 3 0 0.00 0.08 0.00 0.08 0.96 0.96 1.90 1.79 0.00 0.95 999
M 16 26 11 0.52 0.92 0.97 1.89 0.97 0.99 1.08 1.06 0.00 0.72 831
 

Last generated : Fri Jun 16 2000 (14 : 29)