16S rRNA Model Base Pair Collective Scoring Data for Helical Element 511
| Base Pair (511:540)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
90 |
81 |
44 |
0.52 |
0.50 |
0.84 |
1.34 |
0.75 |
0.77 |
0.81 |
0.43 |
0.03 |
0.75 |
6595 |
| 3 |
47 |
36 |
21 |
0.51 |
0.18 |
0.00 |
0.18 |
0.77 |
0.78 |
0.94 |
0.45 |
0.00 |
0.00 |
5611 |
| B |
30 |
30 |
19 |
0.63 |
0.84 |
0.99 |
1.82 |
0.99 |
0.99 |
1.54 |
1.50 |
0.00 |
0.75 |
4402 |
| A |
10 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.63 |
0.00 |
0.00 |
0.00 |
207 |
| C |
4 |
5 |
3 |
0.67 |
0.82 |
0.99 |
1.81 |
0.99 |
0.99 |
1.67 |
1.60 |
0.00 |
0.88 |
160 |
| E |
7 |
6 |
2 |
0.31 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.76 |
0.00 |
0.00 |
0.00 |
1002 |
| M |
39 |
40 |
20 |
0.51 |
0.22 |
0.54 |
0.76 |
0.33 |
0.50 |
1.07 |
0.40 |
0.00 |
0.72 |
833 |
| |
| Base Pair (512:539)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
68 |
82 |
26 |
0.35 |
0.67 |
0.89 |
1.56 |
0.89 |
0.93 |
1.15 |
0.80 |
0.00 |
0.77 |
6582 |
| 3 |
17 |
38 |
14 |
0.51 |
0.87 |
0.97 |
1.83 |
0.97 |
1.00 |
1.23 |
1.19 |
0.00 |
0.78 |
5597 |
| B |
5 |
29 |
6 |
0.35 |
0.03 |
0.00 |
0.03 |
0.96 |
1.00 |
1.95 |
1.74 |
0.00 |
0.75 |
4390 |
| A |
6 |
2 |
2 |
0.50 |
0.57 |
0.96 |
1.53 |
0.96 |
0.97 |
1.42 |
1.69 |
0.00 |
0.78 |
206 |
| C |
3 |
10 |
1 |
0.15 |
0.07 |
0.00 |
0.07 |
0.75 |
0.99 |
1.83 |
1.14 |
0.00 |
0.88 |
160 |
| E |
6 |
7 |
6 |
0.92 |
0.69 |
0.99 |
1.68 |
0.99 |
0.99 |
1.91 |
1.86 |
0.00 |
0.95 |
1001 |
| M |
48 |
34 |
11 |
0.27 |
0.41 |
0.59 |
1.00 |
0.40 |
0.43 |
0.88 |
0.27 |
0.00 |
0.72 |
833 |
| |
| Base Pair (513:538)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
76 |
75 |
54 |
0.71 |
0.98 |
0.99 |
1.97 |
0.99 |
0.99 |
0.37 |
0.40 |
0.00 |
0.77 |
6573 |
| 3 |
48 |
49 |
35 |
0.72 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.39 |
0.43 |
0.00 |
0.78 |
5589 |
| B |
35 |
37 |
28 |
0.78 |
0.98 |
0.99 |
1.98 |
0.99 |
1.00 |
0.61 |
0.62 |
0.00 |
0.75 |
4381 |
| A |
5 |
4 |
3 |
0.67 |
0.96 |
0.98 |
1.94 |
0.98 |
0.98 |
1.01 |
0.96 |
0.00 |
0.78 |
206 |
| C |
4 |
3 |
2 |
0.57 |
0.56 |
0.97 |
1.53 |
0.97 |
1.00 |
1.63 |
1.76 |
0.00 |
0.88 |
160 |
| E |
8 |
8 |
4 |
0.50 |
0.42 |
0.97 |
1.39 |
0.97 |
1.00 |
1.74 |
1.73 |
0.00 |
0.95 |
1002 |
| M |
24 |
23 |
17 |
0.72 |
0.85 |
0.98 |
1.83 |
0.98 |
0.99 |
1.29 |
1.28 |
0.00 |
0.72 |
832 |
| |
| Base Pair (514:537)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
59 |
54 |
42 |
0.74 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.81 |
0.80 |
0.00 |
0.77 |
6568 |
| 3 |
31 |
26 |
20 |
0.70 |
0.98 |
1.00 |
1.98 |
1.00 |
1.00 |
0.90 |
0.90 |
0.00 |
0.78 |
5585 |
| B |
20 |
20 |
15 |
0.75 |
0.95 |
1.00 |
1.95 |
1.00 |
1.00 |
1.57 |
1.57 |
0.00 |
0.75 |
4385 |
| A |
3 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
0.98 |
1.84 |
2.00 |
0.00 |
0.76 |
200 |
| C |
7 |
6 |
5 |
0.77 |
0.98 |
0.99 |
1.98 |
0.99 |
1.00 |
1.03 |
1.02 |
0.00 |
0.88 |
160 |
| E |
8 |
6 |
5 |
0.71 |
0.82 |
0.99 |
1.82 |
0.99 |
1.00 |
1.81 |
1.83 |
0.00 |
0.95 |
1000 |
| M |
21 |
22 |
17 |
0.79 |
0.95 |
0.98 |
1.93 |
0.98 |
0.99 |
0.63 |
0.60 |
0.00 |
0.72 |
831 |
| |
| Base Pair (515:536)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
4 |
10 |
2 |
0.29 |
0.09 |
0.00 |
0.09 |
1.00 |
1.00 |
1.95 |
1.96 |
0.00 |
0.77 |
6600 |
| 3 |
3 |
6 |
1 |
0.22 |
0.06 |
0.00 |
0.06 |
1.00 |
1.00 |
1.95 |
1.97 |
0.00 |
0.78 |
5606 |
| B |
2 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.95 |
1.96 |
0.00 |
0.75 |
4397 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.96 |
1.96 |
0.00 |
0.78 |
207 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.93 |
169 |
| E |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.94 |
1.98 |
0.00 |
0.95 |
1002 |
| M |
1 |
4 |
1 |
0.40 |
0.17 |
0.00 |
0.17 |
0.99 |
1.00 |
1.96 |
1.95 |
0.00 |
0.72 |
833 |
| |
|
| Base Pair (521:528) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
3 |
5 |
0 |
0.00 |
0.04 |
0.00 |
0.04 |
1.00 |
1.00 |
1.96 |
1.96 |
0.00 |
0.77 |
6570 |
| 3 |
3 |
4 |
0 |
0.00 |
0.05 |
0.00 |
0.05 |
1.00 |
1.00 |
1.97 |
1.96 |
0.00 |
0.78 |
5577 |
| B |
3 |
3 |
0 |
0.00 |
0.06 |
0.00 |
0.06 |
1.00 |
1.00 |
1.96 |
1.95 |
0.00 |
0.74 |
4373 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
2.00 |
1.96 |
0.00 |
0.77 |
203 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.95 |
2.00 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.99 |
1.99 |
0.00 |
0.95 |
1001 |
| M |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.96 |
0.00 |
0.72 |
831 |
| |
| Base Pair (522:527) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
8 |
10 |
5 |
0.56 |
0.58 |
1.00 |
1.58 |
1.00 |
1.00 |
1.95 |
1.93 |
0.00 |
0.76 |
6444 |
| 3 |
4 |
6 |
1 |
0.20 |
0.50 |
1.00 |
1.50 |
1.00 |
1.00 |
1.95 |
1.94 |
0.00 |
0.76 |
5452 |
| B |
3 |
6 |
1 |
0.22 |
0.53 |
1.00 |
1.53 |
1.00 |
1.00 |
1.95 |
1.92 |
0.00 |
0.72 |
4252 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.96 |
2.00 |
0.00 |
0.76 |
200 |
| C |
0 |
0 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
0.99 |
0.99 |
1.95 |
1.95 |
0.00 |
0.92 |
168 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.99 |
1.99 |
0.00 |
0.95 |
1000 |
| M |
4 |
4 |
4 |
1.00 |
0.88 |
1.00 |
1.87 |
1.00 |
1.00 |
1.93 |
1.92 |
0.00 |
0.72 |
832 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)