16S rRNA Model Base Pair Collective Scoring Data for Helical Element 577
| Base Pair (577:764)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
30 |
35 |
25 |
0.77 |
0.82 |
0.99 |
1.82 |
0.99 |
1.00 |
1.80 |
1.79 |
0.00 |
0.81 |
6957 |
| 3 |
12 |
15 |
10 |
0.74 |
0.80 |
1.00 |
1.80 |
1.00 |
1.00 |
1.84 |
1.84 |
0.00 |
0.82 |
5914 |
| B |
9 |
11 |
7 |
0.70 |
0.80 |
1.00 |
1.79 |
1.00 |
1.00 |
1.84 |
1.84 |
0.00 |
0.80 |
4670 |
| A |
3 |
4 |
3 |
0.86 |
0.90 |
0.99 |
1.89 |
0.99 |
0.99 |
1.52 |
1.56 |
0.00 |
0.83 |
220 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.87 |
1.87 |
0.00 |
0.91 |
165 |
| E |
0 |
0 |
0 |
0.00 |
0.33 |
0.00 |
0.33 |
1.00 |
1.00 |
1.99 |
1.97 |
0.00 |
0.97 |
1024 |
| M |
17 |
19 |
14 |
0.78 |
0.85 |
0.99 |
1.84 |
0.99 |
0.99 |
1.51 |
1.46 |
0.00 |
0.76 |
886 |
| |
| Base Pair (578:763)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
116 |
116 |
93 |
0.80 |
0.76 |
0.86 |
1.62 |
0.86 |
0.86 |
0.68 |
0.66 |
0.00 |
0.81 |
6959 |
| 3 |
98 |
97 |
80 |
0.82 |
0.69 |
0.84 |
1.53 |
0.84 |
0.84 |
0.72 |
0.62 |
0.00 |
0.82 |
5920 |
| B |
87 |
87 |
77 |
0.89 |
0.98 |
0.99 |
1.97 |
0.99 |
0.99 |
0.64 |
0.64 |
0.00 |
0.79 |
4668 |
| A |
3 |
4 |
3 |
0.86 |
0.96 |
0.99 |
1.96 |
0.99 |
0.99 |
1.05 |
1.11 |
0.00 |
0.83 |
220 |
| C |
2 |
2 |
2 |
1.00 |
0.91 |
0.99 |
1.90 |
0.99 |
0.99 |
1.65 |
1.67 |
0.00 |
0.91 |
165 |
| E |
8 |
6 |
0 |
0.00 |
0.01 |
0.00 |
0.01 |
0.12 |
0.12 |
1.52 |
1.74 |
0.00 |
0.98 |
1032 |
| M |
16 |
17 |
11 |
0.67 |
0.64 |
0.97 |
1.61 |
0.97 |
0.98 |
1.60 |
1.54 |
0.00 |
0.76 |
882 |
| |
| Base Pair (579:762)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
135 |
140 |
90 |
0.66 |
0.87 |
0.93 |
1.80 |
0.93 |
0.99 |
0.22 |
0.15 |
0.00 |
0.82 |
6988 |
| 3 |
102 |
108 |
66 |
0.63 |
0.87 |
0.92 |
1.79 |
0.92 |
0.99 |
0.22 |
0.15 |
0.00 |
0.83 |
5945 |
| B |
88 |
96 |
58 |
0.63 |
0.82 |
0.90 |
1.72 |
0.90 |
0.99 |
0.36 |
0.28 |
0.00 |
0.80 |
4693 |
| A |
6 |
5 |
2 |
0.36 |
0.48 |
0.95 |
1.43 |
0.95 |
1.00 |
1.41 |
1.74 |
0.01 |
0.83 |
220 |
| C |
11 |
8 |
8 |
0.84 |
0.89 |
0.98 |
1.88 |
0.98 |
1.00 |
1.12 |
1.18 |
0.01 |
0.90 |
165 |
| E |
8 |
7 |
6 |
0.80 |
0.86 |
0.99 |
1.85 |
0.99 |
1.00 |
1.62 |
1.62 |
0.00 |
0.98 |
1032 |
| M |
22 |
24 |
16 |
0.70 |
0.71 |
0.95 |
1.66 |
0.95 |
0.95 |
1.22 |
1.12 |
0.00 |
0.76 |
886 |
| |
| Base Pair (580:761)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
122 |
104 |
64 |
0.57 |
0.80 |
0.95 |
1.75 |
0.95 |
0.99 |
0.86 |
0.97 |
0.00 |
0.82 |
6982 |
| 3 |
76 |
51 |
28 |
0.44 |
0.61 |
0.95 |
1.56 |
0.95 |
0.99 |
1.33 |
1.49 |
0.00 |
0.83 |
5939 |
| B |
69 |
45 |
25 |
0.44 |
0.62 |
0.94 |
1.56 |
0.94 |
0.99 |
1.22 |
1.41 |
0.00 |
0.80 |
4692 |
| A |
3 |
5 |
2 |
0.50 |
0.50 |
0.96 |
1.46 |
0.96 |
0.98 |
1.69 |
1.59 |
0.00 |
0.81 |
214 |
| C |
10 |
10 |
8 |
0.80 |
0.67 |
0.96 |
1.62 |
0.96 |
0.98 |
1.43 |
1.42 |
0.00 |
0.91 |
165 |
| E |
4 |
1 |
1 |
0.40 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.93 |
2.00 |
0.00 |
0.98 |
1033 |
| M |
36 |
43 |
28 |
0.71 |
0.92 |
0.95 |
1.86 |
0.95 |
0.95 |
0.12 |
0.13 |
0.00 |
0.76 |
886 |
| |
|
| Base Pair (582:758) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
95 |
111 |
26 |
0.25 |
0.26 |
0.66 |
0.92 |
0.16 |
0.70 |
0.79 |
0.52 |
0.03 |
0.79 |
6988 |
| 3 |
56 |
55 |
17 |
0.31 |
0.29 |
0.70 |
0.99 |
0.11 |
0.69 |
1.20 |
0.89 |
0.00 |
0.83 |
5946 |
| B |
54 |
47 |
17 |
0.34 |
0.50 |
0.84 |
1.34 |
0.14 |
0.82 |
1.11 |
1.08 |
0.00 |
0.80 |
4697 |
| A |
0 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.02 |
0.97 |
2.00 |
1.52 |
0.00 |
0.82 |
217 |
| C |
8 |
17 |
4 |
0.32 |
0.12 |
0.00 |
0.12 |
0.05 |
0.79 |
1.55 |
0.98 |
0.00 |
0.90 |
164 |
| E |
2 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.02 |
1.95 |
1.82 |
0.00 |
0.98 |
1032 |
| M |
31 |
39 |
5 |
0.14 |
0.07 |
0.00 |
0.07 |
0.68 |
0.81 |
-0.31 |
0.37 |
0.20 |
0.53 |
886 |
| |
|
| Base Pair (584:757)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
72 |
70 |
11 |
0.15 |
0.09 |
0.00 |
0.09 |
0.07 |
0.96 |
1.25 |
1.72 |
0.02 |
0.82 |
7034 |
| 3 |
2 |
8 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.97 |
1.93 |
0.00 |
0.83 |
5994 |
| B |
1 |
4 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.96 |
1.98 |
0.00 |
0.81 |
4742 |
| A |
1 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.02 |
1.00 |
1.96 |
1.72 |
0.00 |
0.83 |
219 |
| C |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
1.95 |
1.95 |
0.00 |
0.91 |
165 |
| E |
0 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
2.00 |
1.83 |
0.00 |
0.98 |
1033 |
| M |
69 |
62 |
11 |
0.17 |
0.14 |
0.00 |
0.14 |
0.58 |
0.73 |
-0.24 |
0.71 |
0.11 |
0.73 |
883 |
| |
| Base Pair (585:756)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
90 |
80 |
49 |
0.58 |
0.92 |
0.98 |
1.90 |
0.98 |
0.98 |
0.63 |
0.81 |
0.02 |
0.82 |
7026 |
| 3 |
24 |
20 |
16 |
0.73 |
0.96 |
0.99 |
1.96 |
0.99 |
1.00 |
0.97 |
1.00 |
0.00 |
0.83 |
5985 |
| B |
17 |
12 |
11 |
0.76 |
0.75 |
0.99 |
1.75 |
0.99 |
0.99 |
1.80 |
1.83 |
0.00 |
0.81 |
4731 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.96 |
1.95 |
0.00 |
0.83 |
220 |
| C |
2 |
3 |
1 |
0.40 |
0.71 |
0.99 |
1.70 |
0.99 |
1.00 |
1.81 |
1.75 |
0.00 |
0.90 |
164 |
| E |
6 |
8 |
5 |
0.71 |
0.30 |
0.98 |
1.29 |
0.98 |
1.00 |
1.94 |
1.85 |
0.00 |
0.98 |
1034 |
| M |
64 |
57 |
32 |
0.53 |
0.78 |
0.88 |
1.66 |
0.88 |
0.89 |
-0.20 |
0.42 |
0.12 |
0.73 |
885 |
| |
| Base Pair (586:755)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
183 |
170 |
107 |
0.61 |
0.78 |
0.92 |
1.70 |
0.92 |
0.98 |
0.55 |
0.74 |
0.01 |
0.82 |
7010 |
| 3 |
97 |
87 |
67 |
0.73 |
0.76 |
0.93 |
1.70 |
0.93 |
0.99 |
1.10 |
1.19 |
0.00 |
0.83 |
5968 |
| B |
82 |
71 |
61 |
0.80 |
0.69 |
0.93 |
1.62 |
0.93 |
0.99 |
1.21 |
1.32 |
0.00 |
0.81 |
4723 |
| A |
3 |
4 |
1 |
0.29 |
0.83 |
0.96 |
1.79 |
0.96 |
0.99 |
1.28 |
1.32 |
0.00 |
0.80 |
212 |
| C |
5 |
4 |
4 |
0.89 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.57 |
1.55 |
0.00 |
0.91 |
165 |
| E |
12 |
12 |
5 |
0.42 |
0.85 |
0.93 |
1.78 |
0.93 |
1.00 |
0.98 |
0.97 |
0.00 |
0.98 |
1033 |
| M |
81 |
79 |
36 |
0.45 |
0.74 |
0.82 |
1.57 |
0.82 |
0.86 |
-0.61 |
-0.22 |
0.11 |
0.72 |
885 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)