16S rRNA Model Base Pair Collective Scoring Data for Helical Element 588
| Base Pair (588:651)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
11 |
14 |
6 |
0.48 |
0.63 |
0.99 |
1.62 |
0.99 |
1.00 |
0.53 |
0.54 |
0.00 |
0.61 |
7187 |
| 3 |
8 |
9 |
3 |
0.35 |
0.58 |
1.00 |
1.58 |
1.00 |
1.00 |
0.92 |
0.94 |
0.00 |
0.69 |
6006 |
| B |
8 |
9 |
3 |
0.35 |
0.58 |
1.00 |
1.58 |
1.00 |
1.00 |
1.88 |
1.92 |
0.00 |
0.81 |
4736 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.91 |
2.00 |
0.01 |
0.86 |
228 |
| C |
2 |
3 |
2 |
0.80 |
0.38 |
0.97 |
1.34 |
0.97 |
0.99 |
1.87 |
1.55 |
0.01 |
0.91 |
168 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
1 |
2 |
1 |
0.67 |
0.01 |
0.00 |
0.01 |
0.09 |
0.09 |
-0.36 |
-0.33 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (589:650)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
219 |
222 |
116 |
0.53 |
0.65 |
0.80 |
1.45 |
0.80 |
0.97 |
-0.57 |
-0.58 |
0.00 |
0.61 |
7166 |
| 3 |
200 |
196 |
102 |
0.52 |
0.65 |
0.79 |
1.44 |
0.79 |
0.97 |
-0.36 |
-0.37 |
0.00 |
0.69 |
5985 |
| B |
191 |
185 |
96 |
0.51 |
0.63 |
0.78 |
1.41 |
0.78 |
0.97 |
0.37 |
0.35 |
0.00 |
0.80 |
4724 |
| A |
9 |
11 |
6 |
0.60 |
0.87 |
0.94 |
1.81 |
0.94 |
0.98 |
0.38 |
0.44 |
0.01 |
0.83 |
219 |
| C |
9 |
16 |
5 |
0.40 |
0.76 |
0.87 |
1.63 |
0.87 |
0.96 |
0.73 |
0.69 |
0.00 |
0.91 |
168 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
10 |
10 |
9 |
0.90 |
0.03 |
0.00 |
0.03 |
0.09 |
0.09 |
-0.36 |
-0.36 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (590:649)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
227 |
258 |
87 |
0.36 |
0.41 |
0.61 |
1.02 |
0.61 |
0.95 |
-0.32 |
-0.46 |
0.00 |
0.61 |
7143 |
| 3 |
211 |
232 |
79 |
0.36 |
0.40 |
0.61 |
1.01 |
0.61 |
0.95 |
-0.06 |
-0.20 |
0.00 |
0.68 |
5961 |
| B |
198 |
221 |
73 |
0.35 |
0.38 |
0.60 |
0.97 |
0.60 |
0.95 |
0.74 |
0.52 |
0.00 |
0.80 |
4700 |
| A |
13 |
11 |
6 |
0.50 |
0.54 |
0.81 |
1.36 |
0.81 |
0.99 |
0.87 |
1.14 |
0.01 |
0.83 |
219 |
| C |
8 |
16 |
3 |
0.25 |
0.21 |
0.63 |
0.85 |
0.63 |
0.98 |
1.42 |
0.70 |
0.01 |
0.92 |
169 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
8 |
10 |
5 |
0.56 |
0.05 |
0.00 |
0.05 |
0.08 |
0.09 |
-0.42 |
-0.42 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (591:648)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
295 |
322 |
144 |
0.47 |
0.69 |
0.84 |
1.53 |
0.84 |
0.94 |
-0.58 |
-0.63 |
0.00 |
0.61 |
7163 |
| 3 |
276 |
299 |
132 |
0.46 |
0.69 |
0.84 |
1.53 |
0.84 |
0.94 |
-0.36 |
-0.43 |
0.00 |
0.69 |
5981 |
| B |
260 |
285 |
124 |
0.46 |
0.68 |
0.84 |
1.52 |
0.84 |
0.94 |
0.38 |
0.26 |
0.00 |
0.80 |
4712 |
| A |
16 |
14 |
8 |
0.53 |
0.79 |
0.87 |
1.66 |
0.87 |
0.97 |
0.33 |
0.23 |
0.00 |
0.86 |
227 |
| C |
11 |
14 |
5 |
0.40 |
0.48 |
0.86 |
1.33 |
0.86 |
0.89 |
0.93 |
1.02 |
0.01 |
0.92 |
169 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
8 |
9 |
7 |
0.82 |
0.03 |
0.00 |
0.03 |
0.08 |
0.08 |
-0.36 |
-0.37 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (592:647)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
310 |
349 |
164 |
0.50 |
0.74 |
0.84 |
1.57 |
0.84 |
0.96 |
-0.70 |
-0.78 |
0.00 |
0.61 |
7213 |
| 3 |
278 |
317 |
151 |
0.51 |
0.74 |
0.84 |
1.59 |
0.84 |
0.97 |
-0.49 |
-0.59 |
0.00 |
0.69 |
6031 |
| B |
255 |
294 |
132 |
0.48 |
0.74 |
0.84 |
1.58 |
0.84 |
0.97 |
0.19 |
0.07 |
0.00 |
0.81 |
4757 |
| A |
23 |
23 |
19 |
0.83 |
0.87 |
0.93 |
1.80 |
0.93 |
0.95 |
0.17 |
0.10 |
0.00 |
0.88 |
232 |
| C |
21 |
22 |
9 |
0.42 |
0.36 |
0.62 |
0.98 |
0.56 |
0.63 |
0.16 |
0.56 |
0.00 |
0.92 |
169 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
11 |
10 |
5 |
0.48 |
0.02 |
0.00 |
0.02 |
0.08 |
0.08 |
-0.36 |
-0.34 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (593:646)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
221 |
252 |
102 |
0.43 |
0.62 |
0.80 |
1.42 |
0.41 |
0.95 |
-0.48 |
-0.62 |
0.00 |
0.62 |
7233 |
| 3 |
187 |
219 |
87 |
0.43 |
0.65 |
0.83 |
1.48 |
0.40 |
0.97 |
-0.25 |
-0.36 |
0.00 |
0.70 |
6051 |
| B |
170 |
202 |
74 |
0.40 |
0.63 |
0.83 |
1.46 |
0.38 |
0.97 |
0.52 |
0.38 |
0.00 |
0.81 |
4778 |
| A |
17 |
17 |
13 |
0.77 |
0.70 |
0.85 |
1.55 |
0.86 |
0.94 |
0.39 |
0.42 |
0.00 |
0.88 |
231 |
| C |
23 |
22 |
8 |
0.36 |
0.34 |
0.53 |
0.87 |
0.52 |
0.56 |
0.33 |
0.37 |
0.01 |
0.92 |
169 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
11 |
11 |
7 |
0.64 |
0.01 |
0.00 |
0.01 |
0.05 |
0.06 |
-0.35 |
-0.38 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (594:645)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
148 |
112 |
34 |
0.26 |
0.10 |
0.00 |
0.10 |
0.39 |
0.94 |
-0.25 |
0.01 |
0.00 |
0.61 |
7202 |
| 3 |
121 |
84 |
24 |
0.23 |
0.07 |
0.00 |
0.07 |
0.38 |
0.96 |
0.04 |
0.42 |
0.00 |
0.69 |
6020 |
| B |
110 |
74 |
21 |
0.23 |
0.07 |
0.00 |
0.07 |
0.38 |
0.96 |
0.84 |
1.32 |
0.00 |
0.81 |
4747 |
| A |
11 |
10 |
3 |
0.29 |
0.12 |
0.00 |
0.12 |
0.45 |
0.96 |
0.86 |
1.09 |
0.00 |
0.88 |
231 |
| C |
15 |
15 |
3 |
0.20 |
0.34 |
0.67 |
1.01 |
0.67 |
0.82 |
0.71 |
0.53 |
0.00 |
0.93 |
169 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
12 |
13 |
7 |
0.56 |
0.02 |
0.00 |
0.02 |
0.03 |
0.03 |
-0.41 |
-0.38 |
0.00 |
0.00 |
1021 |
| |
|
| Base Pair (596:644) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
40 |
46 |
19 |
0.44 |
0.89 |
0.98 |
1.87 |
0.98 |
0.98 |
-0.02 |
-0.03 |
0.00 |
0.62 |
7253 |
| 3 |
29 |
34 |
19 |
0.60 |
0.92 |
0.98 |
1.90 |
0.98 |
0.98 |
0.31 |
0.29 |
0.00 |
0.70 |
6071 |
| B |
24 |
28 |
15 |
0.58 |
0.92 |
0.98 |
1.90 |
0.98 |
0.98 |
1.16 |
1.14 |
0.00 |
0.82 |
4796 |
| A |
5 |
6 |
4 |
0.73 |
0.81 |
0.98 |
1.79 |
0.98 |
0.99 |
1.54 |
1.48 |
0.00 |
0.88 |
233 |
| C |
5 |
2 |
0 |
0.00 |
0.05 |
0.00 |
0.05 |
0.88 |
0.88 |
1.50 |
1.91 |
0.00 |
0.93 |
169 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
6 |
10 |
0 |
0.00 |
0.02 |
0.00 |
0.02 |
0.06 |
0.06 |
-0.33 |
-0.36 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (597:643)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
14 |
21 |
4 |
0.23 |
0.18 |
0.00 |
0.18 |
0.98 |
0.99 |
0.52 |
0.55 |
0.00 |
0.62 |
7236 |
| 3 |
4 |
7 |
0 |
0.00 |
0.02 |
0.00 |
0.02 |
0.99 |
0.99 |
0.96 |
0.96 |
0.00 |
0.70 |
6053 |
| B |
1 |
7 |
0 |
0.00 |
0.03 |
0.00 |
0.03 |
0.99 |
0.99 |
1.96 |
1.94 |
0.00 |
0.81 |
4778 |
| A |
3 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.96 |
0.96 |
1.77 |
1.95 |
0.00 |
0.88 |
233 |
| C |
3 |
4 |
2 |
0.57 |
0.64 |
0.97 |
1.61 |
0.97 |
0.97 |
1.52 |
1.62 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
7 |
10 |
2 |
0.23 |
0.01 |
0.00 |
0.01 |
0.04 |
0.04 |
-0.34 |
-0.32 |
0.00 |
0.00 |
1021 |
| |
|
| Base Pair (598:640)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
42 |
57 |
37 |
0.75 |
0.64 |
0.95 |
1.59 |
0.95 |
0.99 |
0.23 |
0.13 |
0.00 |
0.62 |
7246 |
| 3 |
35 |
48 |
32 |
0.77 |
0.62 |
0.95 |
1.57 |
0.95 |
0.99 |
0.58 |
0.46 |
0.00 |
0.70 |
6063 |
| B |
35 |
45 |
32 |
0.80 |
0.63 |
0.95 |
1.58 |
0.95 |
0.99 |
1.47 |
1.32 |
0.00 |
0.82 |
4797 |
| A |
0 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
1.00 |
1.96 |
1.82 |
0.00 |
0.85 |
224 |
| C |
1 |
3 |
0 |
0.00 |
0.25 |
0.98 |
1.23 |
0.98 |
0.98 |
1.83 |
1.78 |
0.00 |
0.92 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
6 |
6 |
5 |
0.83 |
0.03 |
0.00 |
0.03 |
0.06 |
0.06 |
-0.35 |
-0.32 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (599:639)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
112 |
106 |
88 |
0.81 |
0.82 |
0.96 |
1.78 |
0.96 |
0.99 |
-0.19 |
-0.13 |
0.00 |
0.61 |
7177 |
| 3 |
100 |
93 |
80 |
0.83 |
0.83 |
0.96 |
1.79 |
0.96 |
0.99 |
0.10 |
0.16 |
0.00 |
0.69 |
5994 |
| B |
93 |
88 |
76 |
0.84 |
0.83 |
0.96 |
1.79 |
0.96 |
0.99 |
0.90 |
0.98 |
0.00 |
0.81 |
4730 |
| A |
7 |
5 |
4 |
0.67 |
0.90 |
0.98 |
1.88 |
0.98 |
1.00 |
1.34 |
1.37 |
0.00 |
0.84 |
222 |
| C |
6 |
6 |
4 |
0.67 |
0.89 |
0.98 |
1.88 |
0.98 |
0.99 |
1.21 |
1.25 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
6 |
7 |
4 |
0.61 |
0.01 |
0.00 |
0.01 |
0.04 |
0.07 |
-0.32 |
-0.31 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (600:638)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
190 |
180 |
117 |
0.63 |
0.78 |
0.86 |
1.65 |
0.71 |
0.98 |
-0.70 |
-0.68 |
0.00 |
0.61 |
7233 |
| 3 |
161 |
156 |
105 |
0.66 |
0.81 |
0.89 |
1.70 |
0.71 |
0.98 |
-0.47 |
-0.46 |
0.00 |
0.70 |
6050 |
| B |
143 |
138 |
96 |
0.68 |
0.86 |
0.92 |
1.77 |
0.71 |
0.98 |
0.28 |
0.27 |
0.00 |
0.81 |
4775 |
| A |
18 |
18 |
10 |
0.56 |
0.71 |
0.82 |
1.53 |
0.82 |
0.96 |
0.34 |
0.41 |
0.00 |
0.88 |
233 |
| C |
18 |
18 |
7 |
0.39 |
0.41 |
0.61 |
1.02 |
0.64 |
0.92 |
0.42 |
0.45 |
0.01 |
0.92 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
11 |
6 |
5 |
0.59 |
0.03 |
0.00 |
0.03 |
0.06 |
0.06 |
-0.38 |
-0.34 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (601:637)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
112 |
152 |
40 |
0.30 |
0.23 |
0.70 |
0.93 |
0.28 |
0.97 |
-0.27 |
-0.31 |
0.00 |
0.60 |
7153 |
| 3 |
88 |
134 |
30 |
0.27 |
0.24 |
0.72 |
0.96 |
0.27 |
0.98 |
0.03 |
-0.04 |
0.00 |
0.69 |
5970 |
| B |
75 |
121 |
25 |
0.26 |
0.24 |
0.74 |
0.99 |
0.25 |
0.97 |
0.97 |
0.82 |
0.00 |
0.80 |
4695 |
| A |
13 |
13 |
5 |
0.39 |
0.51 |
0.77 |
1.28 |
0.77 |
0.98 |
0.32 |
0.76 |
0.00 |
0.88 |
233 |
| C |
17 |
12 |
7 |
0.48 |
0.31 |
0.68 |
0.99 |
0.44 |
0.97 |
0.42 |
0.87 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
7 |
6 |
4 |
0.61 |
0.01 |
0.00 |
0.01 |
0.03 |
0.03 |
-0.24 |
-0.21 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (602:636)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
203 |
155 |
74 |
0.41 |
0.53 |
0.74 |
1.27 |
0.74 |
0.97 |
-0.75 |
-0.48 |
0.00 |
0.62 |
7261 |
| 3 |
181 |
136 |
60 |
0.38 |
0.52 |
0.73 |
1.25 |
0.73 |
0.97 |
-0.53 |
-0.21 |
0.00 |
0.70 |
6078 |
| B |
173 |
128 |
59 |
0.39 |
0.51 |
0.74 |
1.25 |
0.74 |
0.97 |
0.19 |
0.59 |
0.00 |
0.82 |
4803 |
| A |
8 |
8 |
1 |
0.12 |
0.00 |
0.00 |
0.00 |
0.55 |
1.00 |
1.03 |
1.24 |
0.00 |
0.88 |
233 |
| C |
16 |
16 |
12 |
0.75 |
0.79 |
0.91 |
1.70 |
0.91 |
0.94 |
0.62 |
0.61 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
6 |
3 |
2 |
0.44 |
0.01 |
0.00 |
0.01 |
0.02 |
0.02 |
-0.23 |
-0.22 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (603:635)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
137 |
146 |
102 |
0.72 |
0.81 |
0.91 |
1.72 |
0.91 |
0.99 |
-0.58 |
-0.67 |
0.00 |
0.61 |
7254 |
| 3 |
124 |
134 |
97 |
0.75 |
0.81 |
0.91 |
1.72 |
0.91 |
0.99 |
-0.34 |
-0.46 |
0.00 |
0.70 |
6071 |
| B |
115 |
120 |
91 |
0.77 |
0.83 |
0.92 |
1.74 |
0.92 |
0.99 |
0.40 |
0.27 |
0.00 |
0.82 |
4797 |
| A |
9 |
14 |
6 |
0.52 |
0.62 |
0.74 |
1.35 |
0.74 |
1.00 |
0.41 |
0.07 |
0.00 |
0.88 |
232 |
| C |
7 |
9 |
3 |
0.38 |
0.71 |
0.88 |
1.58 |
0.88 |
0.98 |
0.86 |
0.86 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
6 |
3 |
2 |
0.44 |
0.01 |
0.00 |
0.01 |
0.04 |
0.04 |
-0.22 |
-0.20 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (604:634)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
31 |
44 |
17 |
0.45 |
0.46 |
0.96 |
1.42 |
0.97 |
0.99 |
0.34 |
0.30 |
0.00 |
0.62 |
7270 |
| 3 |
24 |
32 |
13 |
0.46 |
0.48 |
0.97 |
1.45 |
0.97 |
0.99 |
0.72 |
0.69 |
0.00 |
0.70 |
6088 |
| B |
17 |
26 |
11 |
0.51 |
0.57 |
0.98 |
1.55 |
0.97 |
0.99 |
1.75 |
1.69 |
0.00 |
0.82 |
4814 |
| A |
7 |
6 |
2 |
0.31 |
0.53 |
0.82 |
1.35 |
0.82 |
1.00 |
0.80 |
0.74 |
0.00 |
0.88 |
232 |
| C |
2 |
5 |
1 |
0.29 |
0.53 |
0.95 |
1.47 |
0.95 |
0.98 |
1.39 |
1.22 |
0.01 |
0.92 |
169 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
5 |
7 |
3 |
0.50 |
0.01 |
0.00 |
0.01 |
0.03 |
0.03 |
-0.24 |
-0.24 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (605:633)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
22 |
56 |
8 |
0.20 |
0.14 |
0.00 |
0.14 |
0.04 |
0.92 |
0.43 |
0.08 |
0.01 |
0.61 |
7254 |
| 3 |
12 |
46 |
5 |
0.17 |
0.13 |
0.00 |
0.13 |
0.04 |
0.92 |
0.82 |
0.41 |
0.01 |
0.69 |
6071 |
| B |
2 |
38 |
3 |
0.15 |
0.01 |
0.00 |
0.01 |
0.02 |
0.91 |
1.95 |
1.30 |
0.01 |
0.81 |
4799 |
| A |
10 |
8 |
2 |
0.22 |
0.64 |
0.81 |
1.46 |
0.44 |
0.99 |
0.51 |
0.60 |
0.01 |
0.86 |
230 |
| C |
2 |
3 |
0 |
0.00 |
0.36 |
0.95 |
1.30 |
0.05 |
0.97 |
1.64 |
1.42 |
0.01 |
0.92 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
8 |
7 |
3 |
0.40 |
0.01 |
0.00 |
0.01 |
0.01 |
0.04 |
-0.24 |
-0.24 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (606:632)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
89 |
148 |
18 |
0.15 |
0.15 |
0.00 |
0.15 |
0.09 |
0.78 |
-0.06 |
-0.30 |
0.01 |
0.61 |
7251 |
| 3 |
67 |
128 |
12 |
0.12 |
0.10 |
0.00 |
0.10 |
0.07 |
0.78 |
0.34 |
0.02 |
0.01 |
0.69 |
6068 |
| B |
64 |
114 |
12 |
0.14 |
0.10 |
0.00 |
0.10 |
0.07 |
0.79 |
1.25 |
0.72 |
0.01 |
0.80 |
4794 |
| A |
3 |
14 |
0 |
0.00 |
0.08 |
0.00 |
0.08 |
0.07 |
0.59 |
0.86 |
1.00 |
0.01 |
0.87 |
232 |
| C |
15 |
15 |
5 |
0.33 |
0.58 |
0.77 |
1.35 |
0.77 |
0.91 |
0.52 |
0.46 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
7 |
5 |
1 |
0.17 |
0.01 |
0.00 |
0.01 |
0.01 |
0.03 |
-0.25 |
-0.23 |
0.00 |
0.00 |
1021 |
| |
|
| Base Pair (611:629) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
160 |
150 |
30 |
0.19 |
0.15 |
0.00 |
0.15 |
0.28 |
0.36 |
-0.33 |
-0.46 |
0.00 |
0.58 |
7041 |
| 3 |
140 |
130 |
26 |
0.19 |
0.15 |
0.00 |
0.15 |
0.29 |
0.36 |
-0.03 |
-0.21 |
0.00 |
0.66 |
5858 |
| B |
133 |
124 |
22 |
0.17 |
0.17 |
0.00 |
0.17 |
0.26 |
0.34 |
0.70 |
0.54 |
0.00 |
0.78 |
4598 |
| A |
7 |
6 |
4 |
0.61 |
0.32 |
0.86 |
1.18 |
0.86 |
0.89 |
1.09 |
1.49 |
0.00 |
0.82 |
218 |
| C |
15 |
17 |
3 |
0.19 |
0.30 |
0.59 |
0.89 |
0.06 |
0.07 |
0.40 |
0.69 |
0.02 |
0.90 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
5 |
3 |
1 |
0.25 |
0.01 |
0.00 |
0.01 |
0.01 |
0.03 |
-0.22 |
-0.22 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (612:628)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
141 |
126 |
83 |
0.62 |
0.69 |
0.93 |
1.62 |
0.92 |
0.98 |
-0.10 |
-0.06 |
0.00 |
0.60 |
7150 |
| 3 |
127 |
109 |
75 |
0.64 |
0.70 |
0.94 |
1.64 |
0.93 |
0.98 |
0.22 |
0.27 |
0.00 |
0.68 |
5967 |
| B |
112 |
97 |
64 |
0.61 |
0.69 |
0.94 |
1.63 |
0.93 |
0.98 |
1.06 |
1.16 |
0.00 |
0.80 |
4693 |
| A |
15 |
12 |
11 |
0.81 |
0.94 |
0.97 |
1.91 |
0.97 |
0.99 |
0.70 |
0.67 |
0.00 |
0.87 |
232 |
| C |
9 |
12 |
6 |
0.57 |
0.63 |
0.83 |
1.46 |
0.83 |
0.94 |
0.60 |
0.69 |
0.00 |
0.92 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
5 |
5 |
2 |
0.40 |
0.01 |
0.00 |
0.01 |
0.03 |
0.03 |
-0.22 |
-0.21 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (613:627)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
172 |
161 |
104 |
0.62 |
0.83 |
0.95 |
1.78 |
0.95 |
0.99 |
-0.31 |
-0.23 |
0.00 |
0.61 |
7207 |
| 3 |
154 |
142 |
95 |
0.64 |
0.83 |
0.95 |
1.78 |
0.95 |
0.99 |
-0.03 |
0.07 |
0.00 |
0.69 |
6024 |
| B |
139 |
125 |
82 |
0.62 |
0.83 |
0.95 |
1.78 |
0.95 |
1.00 |
0.79 |
0.94 |
0.01 |
0.81 |
4750 |
| A |
15 |
17 |
13 |
0.81 |
0.82 |
0.89 |
1.71 |
0.89 |
0.99 |
0.10 |
0.10 |
0.00 |
0.88 |
232 |
| C |
11 |
11 |
6 |
0.55 |
0.80 |
0.91 |
1.71 |
0.91 |
0.98 |
0.71 |
0.78 |
0.00 |
0.92 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
7 |
8 |
6 |
0.80 |
0.02 |
0.00 |
0.02 |
0.03 |
0.04 |
-0.23 |
-0.23 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (614:626)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
244 |
231 |
133 |
0.56 |
0.83 |
0.88 |
1.72 |
0.88 |
0.98 |
-0.78 |
-0.73 |
0.00 |
0.61 |
7233 |
| 3 |
224 |
210 |
121 |
0.56 |
0.83 |
0.88 |
1.71 |
0.88 |
0.99 |
-0.58 |
-0.52 |
0.00 |
0.70 |
6050 |
| B |
207 |
197 |
112 |
0.55 |
0.83 |
0.88 |
1.71 |
0.88 |
0.99 |
0.09 |
0.16 |
0.00 |
0.81 |
4777 |
| A |
17 |
13 |
9 |
0.60 |
0.80 |
0.88 |
1.68 |
0.88 |
0.98 |
0.14 |
0.34 |
0.00 |
0.87 |
231 |
| C |
15 |
15 |
8 |
0.53 |
0.71 |
0.91 |
1.62 |
0.91 |
0.94 |
0.68 |
0.81 |
0.01 |
0.92 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
5 |
6 |
5 |
0.91 |
0.02 |
0.00 |
0.02 |
0.04 |
0.04 |
-0.23 |
-0.22 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (615:625)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
184 |
209 |
113 |
0.57 |
0.45 |
0.60 |
1.05 |
0.69 |
0.99 |
-0.57 |
-0.72 |
0.00 |
0.61 |
7253 |
| 3 |
165 |
188 |
107 |
0.61 |
0.46 |
0.62 |
1.08 |
0.68 |
0.99 |
-0.33 |
-0.51 |
0.00 |
0.70 |
6070 |
| B |
149 |
172 |
97 |
0.60 |
0.45 |
0.62 |
1.07 |
0.67 |
0.99 |
0.40 |
0.18 |
0.00 |
0.82 |
4795 |
| A |
16 |
16 |
10 |
0.62 |
0.82 |
0.92 |
1.75 |
0.92 |
0.99 |
0.38 |
0.48 |
0.00 |
0.88 |
233 |
| C |
14 |
15 |
4 |
0.28 |
0.61 |
0.83 |
1.44 |
0.83 |
0.94 |
0.68 |
0.55 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
5 |
6 |
2 |
0.36 |
0.02 |
0.00 |
0.02 |
0.04 |
0.04 |
-0.22 |
-0.22 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (616:624)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
167 |
185 |
120 |
0.68 |
0.71 |
0.89 |
1.60 |
0.89 |
0.99 |
-0.24 |
-0.31 |
0.00 |
0.62 |
7280 |
| 3 |
154 |
170 |
109 |
0.67 |
0.71 |
0.89 |
1.60 |
0.89 |
0.99 |
0.04 |
-0.04 |
0.00 |
0.70 |
6097 |
| B |
140 |
155 |
98 |
0.66 |
0.69 |
0.89 |
1.58 |
0.89 |
0.99 |
0.88 |
0.78 |
0.00 |
0.82 |
4821 |
| A |
14 |
15 |
11 |
0.76 |
0.91 |
0.94 |
1.85 |
0.94 |
1.00 |
0.27 |
0.33 |
0.00 |
0.89 |
234 |
| C |
8 |
9 |
7 |
0.82 |
0.71 |
0.92 |
1.63 |
0.92 |
0.96 |
1.03 |
1.02 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
5 |
6 |
5 |
0.91 |
0.01 |
0.00 |
0.01 |
0.04 |
0.04 |
-0.20 |
-0.21 |
0.00 |
0.00 |
1021 |
| |
| Base Pair (617:623)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
17 |
13 |
9 |
0.60 |
0.49 |
0.99 |
1.49 |
0.99 |
0.99 |
0.50 |
0.52 |
0.00 |
0.61 |
7284 |
| 3 |
9 |
5 |
4 |
0.57 |
0.46 |
1.00 |
1.46 |
1.00 |
1.00 |
0.93 |
0.96 |
0.00 |
0.70 |
6101 |
| B |
7 |
3 |
3 |
0.60 |
0.47 |
1.00 |
1.47 |
1.00 |
1.00 |
1.90 |
1.94 |
0.00 |
0.82 |
4825 |
| A |
2 |
2 |
1 |
0.50 |
0.50 |
0.99 |
1.49 |
0.99 |
0.99 |
1.83 |
1.88 |
0.00 |
0.88 |
234 |
| C |
3 |
2 |
1 |
0.40 |
0.65 |
0.96 |
1.61 |
0.96 |
0.96 |
1.32 |
1.37 |
0.00 |
0.93 |
170 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1042 |
| M |
5 |
6 |
4 |
0.73 |
0.00 |
0.00 |
0.00 |
0.01 |
0.01 |
-0.12 |
-0.11 |
0.00 |
0.00 |
1021 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)