16S rRNA Model Base Pair Collective Scoring Data for Helical Element 769
| Base Pair (769:810)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
38 |
44 |
14 |
0.34 |
0.53 |
0.99 |
1.53 |
0.99 |
0.99 |
1.83 |
1.81 |
0.00 |
0.83 |
7119 |
| 3 |
8 |
3 |
2 |
0.36 |
0.23 |
1.00 |
1.23 |
1.00 |
1.00 |
1.92 |
1.97 |
0.00 |
0.84 |
6065 |
| B |
6 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.92 |
1.98 |
0.00 |
0.82 |
4795 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.82 |
1.80 |
0.00 |
0.87 |
229 |
| C |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.90 |
2.00 |
0.00 |
0.92 |
168 |
| E |
0 |
0 |
0 |
0.00 |
0.33 |
0.00 |
0.33 |
1.00 |
1.00 |
1.99 |
1.97 |
0.00 |
0.99 |
1041 |
| M |
28 |
41 |
12 |
0.35 |
0.67 |
0.96 |
1.63 |
0.96 |
0.97 |
1.34 |
1.17 |
0.00 |
0.77 |
894 |
| |
| Base Pair (770:809)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
59 |
75 |
48 |
0.72 |
0.94 |
0.99 |
1.93 |
0.99 |
0.99 |
1.25 |
1.25 |
0.00 |
0.83 |
7109 |
| 3 |
35 |
37 |
30 |
0.83 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
1.22 |
1.25 |
0.00 |
0.84 |
6054 |
| B |
32 |
33 |
27 |
0.83 |
0.86 |
0.99 |
1.85 |
0.99 |
0.99 |
1.66 |
1.70 |
0.00 |
0.81 |
4785 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.96 |
0.00 |
0.87 |
229 |
| C |
3 |
2 |
2 |
0.80 |
0.89 |
0.99 |
1.88 |
0.99 |
1.00 |
1.70 |
1.72 |
0.00 |
0.92 |
167 |
| E |
3 |
4 |
3 |
0.86 |
0.95 |
1.00 |
1.95 |
1.00 |
1.00 |
1.66 |
1.65 |
0.00 |
0.99 |
1040 |
| M |
21 |
36 |
16 |
0.56 |
0.70 |
0.96 |
1.66 |
0.96 |
0.96 |
1.49 |
1.29 |
0.00 |
0.77 |
896 |
| |
| Base Pair (771:808)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
128 |
155 |
101 |
0.71 |
0.96 |
0.98 |
1.95 |
0.98 |
0.99 |
0.50 |
0.48 |
0.00 |
0.83 |
7092 |
| 3 |
79 |
84 |
65 |
0.80 |
0.96 |
0.99 |
1.94 |
0.99 |
1.00 |
0.65 |
0.66 |
0.00 |
0.84 |
6038 |
| B |
62 |
65 |
50 |
0.79 |
0.90 |
0.99 |
1.89 |
0.99 |
0.99 |
1.20 |
1.23 |
0.00 |
0.81 |
4772 |
| A |
9 |
9 |
9 |
1.00 |
0.97 |
0.99 |
1.96 |
0.99 |
1.00 |
0.92 |
1.00 |
0.01 |
0.84 |
225 |
| C |
7 |
9 |
7 |
0.88 |
0.68 |
0.96 |
1.65 |
0.96 |
1.00 |
1.47 |
1.31 |
0.00 |
0.90 |
166 |
| E |
8 |
10 |
6 |
0.67 |
0.96 |
0.99 |
1.95 |
0.99 |
1.00 |
0.78 |
0.76 |
0.00 |
0.99 |
1041 |
| M |
42 |
62 |
29 |
0.56 |
0.82 |
0.97 |
1.79 |
0.97 |
0.98 |
1.12 |
0.96 |
0.01 |
0.77 |
896 |
| |
| Base Pair (772:807)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
92 |
114 |
72 |
0.70 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.71 |
0.69 |
0.00 |
0.84 |
7122 |
| 3 |
48 |
48 |
43 |
0.90 |
0.99 |
1.00 |
1.98 |
1.00 |
1.00 |
0.90 |
0.90 |
0.00 |
0.84 |
6067 |
| B |
28 |
27 |
23 |
0.84 |
0.95 |
1.00 |
1.95 |
1.00 |
1.00 |
1.51 |
1.51 |
0.00 |
0.82 |
4799 |
| A |
9 |
10 |
9 |
0.95 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.75 |
0.71 |
0.00 |
0.86 |
228 |
| C |
8 |
9 |
7 |
0.82 |
0.53 |
0.96 |
1.49 |
0.96 |
0.99 |
1.60 |
1.65 |
0.00 |
0.92 |
167 |
| E |
11 |
11 |
11 |
1.00 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
1.09 |
1.11 |
0.00 |
0.99 |
1040 |
| M |
36 |
57 |
22 |
0.47 |
0.87 |
0.95 |
1.82 |
0.95 |
0.96 |
0.69 |
0.62 |
0.00 |
0.77 |
896 |
| |
| Base Pair (773:806)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
70 |
91 |
45 |
0.56 |
0.47 |
0.90 |
1.36 |
0.90 |
0.99 |
1.50 |
1.23 |
0.00 |
0.84 |
7131 |
| 3 |
9 |
17 |
5 |
0.39 |
0.15 |
0.00 |
0.15 |
0.89 |
1.00 |
1.84 |
1.44 |
0.00 |
0.85 |
6074 |
| B |
5 |
8 |
4 |
0.61 |
0.81 |
1.00 |
1.80 |
1.00 |
1.00 |
1.86 |
1.87 |
0.00 |
0.82 |
4804 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.96 |
0.00 |
0.87 |
230 |
| C |
7 |
9 |
7 |
0.88 |
0.92 |
0.98 |
1.90 |
0.98 |
1.00 |
1.13 |
1.09 |
0.00 |
0.92 |
167 |
| E |
4 |
9 |
1 |
0.15 |
0.01 |
0.00 |
0.01 |
0.36 |
1.00 |
1.72 |
1.08 |
0.00 |
0.99 |
1040 |
| M |
54 |
65 |
33 |
0.56 |
0.90 |
0.95 |
1.84 |
0.95 |
0.97 |
0.79 |
0.72 |
0.01 |
0.77 |
898 |
| |
| Base Pair (774:805)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
30 |
16 |
0.56 |
0.90 |
0.99 |
1.90 |
0.99 |
1.00 |
1.73 |
1.69 |
0.00 |
0.84 |
7160 |
| 3 |
5 |
5 |
4 |
0.80 |
0.97 |
1.00 |
1.97 |
1.00 |
1.00 |
1.75 |
1.75 |
0.00 |
0.85 |
6104 |
| B |
2 |
1 |
1 |
0.67 |
0.17 |
0.00 |
0.17 |
1.00 |
1.00 |
1.98 |
1.99 |
0.00 |
0.82 |
4835 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.87 |
230 |
| C |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.72 |
1.72 |
0.00 |
0.92 |
167 |
| E |
3 |
4 |
3 |
0.86 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
1.21 |
1.21 |
0.00 |
0.99 |
1039 |
| M |
19 |
22 |
9 |
0.44 |
0.64 |
0.97 |
1.61 |
0.97 |
0.98 |
1.57 |
1.35 |
0.01 |
0.77 |
897 |
| |
|
| Base Pair (778:804)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
65 |
14 |
6 |
0.15 |
0.37 |
0.82 |
1.20 |
0.12 |
0.83 |
0.79 |
1.36 |
0.01 |
0.83 |
7148 |
| 3 |
41 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.80 |
1.20 |
1.98 |
0.00 |
0.85 |
6093 |
| B |
29 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.96 |
1.73 |
1.98 |
0.00 |
0.82 |
4827 |
| A |
5 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.19 |
0.85 |
0.75 |
1.95 |
0.00 |
0.86 |
226 |
| C |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.95 |
2.00 |
0.00 |
0.92 |
167 |
| E |
7 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.05 |
1.68 |
1.99 |
0.00 |
0.99 |
1040 |
| M |
23 |
11 |
6 |
0.35 |
0.78 |
0.97 |
1.75 |
0.90 |
0.98 |
1.10 |
0.84 |
0.07 |
0.74 |
896 |
| |
| Base Pair (779:803)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
20 |
13 |
0.60 |
0.97 |
1.00 |
1.97 |
1.00 |
1.00 |
1.38 |
1.36 |
0.00 |
0.84 |
7200 |
| 3 |
11 |
6 |
5 |
0.59 |
0.85 |
1.00 |
1.85 |
1.00 |
1.00 |
1.89 |
1.89 |
0.00 |
0.85 |
6109 |
| B |
10 |
5 |
4 |
0.53 |
0.75 |
1.00 |
1.75 |
1.00 |
1.00 |
1.92 |
1.92 |
0.00 |
0.83 |
4841 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
1.95 |
0.00 |
0.87 |
229 |
| C |
2 |
4 |
2 |
0.67 |
0.89 |
0.99 |
1.88 |
0.99 |
0.99 |
1.61 |
1.62 |
0.01 |
0.91 |
167 |
| E |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.76 |
1.74 |
0.00 |
0.98 |
1039 |
| M |
10 |
10 |
6 |
0.60 |
0.88 |
0.98 |
1.86 |
0.98 |
0.99 |
1.39 |
1.24 |
0.02 |
0.79 |
933 |
| |
|
| Base Pair (783:799)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
53 |
61 |
39 |
0.68 |
0.93 |
0.98 |
1.91 |
0.98 |
0.99 |
0.64 |
0.59 |
0.00 |
0.82 |
7019 |
| 3 |
25 |
29 |
20 |
0.74 |
0.92 |
0.98 |
1.91 |
0.98 |
0.99 |
1.07 |
1.01 |
0.00 |
0.82 |
5925 |
| B |
12 |
15 |
12 |
0.89 |
0.91 |
0.99 |
1.90 |
0.99 |
1.00 |
1.68 |
1.65 |
0.00 |
0.80 |
4657 |
| A |
5 |
6 |
4 |
0.73 |
0.71 |
0.96 |
1.66 |
0.96 |
1.00 |
1.19 |
1.22 |
0.00 |
0.87 |
230 |
| C |
10 |
10 |
8 |
0.80 |
0.84 |
0.96 |
1.80 |
0.96 |
0.98 |
1.03 |
0.96 |
0.02 |
0.91 |
168 |
| E |
8 |
8 |
4 |
0.50 |
0.41 |
0.93 |
1.35 |
0.93 |
0.99 |
1.67 |
1.46 |
0.00 |
0.98 |
1038 |
| M |
18 |
22 |
11 |
0.55 |
0.55 |
0.94 |
1.49 |
0.94 |
0.94 |
1.15 |
1.29 |
0.00 |
0.79 |
934 |
| |
| Base Pair (784:798)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
74 |
69 |
60 |
0.84 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
1.02 |
1.01 |
0.00 |
0.84 |
7206 |
| 3 |
43 |
39 |
38 |
0.93 |
0.96 |
0.99 |
1.95 |
0.99 |
1.00 |
1.33 |
1.34 |
0.00 |
0.85 |
6113 |
| B |
30 |
27 |
28 |
0.98 |
0.96 |
1.00 |
1.96 |
1.00 |
1.00 |
1.55 |
1.54 |
0.00 |
0.83 |
4842 |
| A |
4 |
5 |
4 |
0.89 |
0.96 |
0.99 |
1.95 |
0.99 |
0.99 |
1.16 |
1.13 |
0.00 |
0.87 |
230 |
| C |
7 |
7 |
7 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.31 |
1.31 |
0.00 |
0.92 |
168 |
| E |
9 |
7 |
6 |
0.75 |
0.91 |
0.99 |
1.90 |
0.99 |
0.99 |
1.31 |
1.39 |
0.00 |
0.99 |
1041 |
| M |
24 |
23 |
15 |
0.64 |
0.87 |
0.97 |
1.85 |
0.97 |
0.98 |
0.97 |
0.91 |
0.00 |
0.79 |
933 |
| |
| Base Pair (785:797)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
26 |
19 |
14 |
0.62 |
0.93 |
0.99 |
1.92 |
0.99 |
1.00 |
1.23 |
1.25 |
0.00 |
0.84 |
7215 |
| 3 |
15 |
8 |
5 |
0.43 |
0.93 |
0.99 |
1.92 |
0.99 |
1.00 |
1.21 |
1.23 |
0.00 |
0.85 |
6120 |
| B |
2 |
1 |
1 |
0.67 |
0.61 |
1.00 |
1.61 |
1.00 |
1.00 |
1.95 |
1.96 |
0.00 |
0.83 |
4852 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
1.95 |
0.00 |
0.87 |
230 |
| C |
1 |
2 |
1 |
0.67 |
0.75 |
0.99 |
1.74 |
0.99 |
1.00 |
1.87 |
1.84 |
0.00 |
0.92 |
168 |
| E |
12 |
7 |
4 |
0.42 |
0.64 |
0.94 |
1.58 |
0.94 |
0.99 |
1.31 |
1.43 |
0.00 |
0.98 |
1038 |
| M |
10 |
9 |
8 |
0.84 |
0.83 |
1.00 |
1.83 |
1.00 |
1.00 |
1.65 |
1.65 |
0.00 |
0.79 |
935 |
| |
| Base Pair (786:796)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
4 |
2 |
1 |
0.33 |
0.25 |
0.00 |
0.25 |
1.00 |
1.00 |
1.94 |
1.95 |
0.00 |
0.84 |
7208 |
| 3 |
2 |
1 |
1 |
0.67 |
0.36 |
0.00 |
0.36 |
1.00 |
1.00 |
1.97 |
1.99 |
0.00 |
0.85 |
6114 |
| B |
2 |
1 |
1 |
0.67 |
0.44 |
0.00 |
0.44 |
1.00 |
1.00 |
1.97 |
1.98 |
0.00 |
0.83 |
4850 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.96 |
0.00 |
0.86 |
226 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.92 |
168 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.99 |
2.00 |
0.00 |
0.98 |
1038 |
| M |
2 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.79 |
1.79 |
0.00 |
0.79 |
934 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)