16S rRNA Model Base Pair Collective Scoring Data for Helical Element 821
| Base Pair (821:879)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
66 |
94 |
19 |
0.24 |
0.25 |
0.84 |
1.09 |
0.84 |
0.98 |
1.42 |
1.14 |
0.01 |
0.83 |
7164 |
| 3 |
10 |
16 |
3 |
0.23 |
0.07 |
0.00 |
0.07 |
0.85 |
1.00 |
1.88 |
1.35 |
0.00 |
0.82 |
5916 |
| B |
5 |
4 |
3 |
0.67 |
0.74 |
1.00 |
1.74 |
1.00 |
1.00 |
1.93 |
1.94 |
0.00 |
0.80 |
4679 |
| A |
1 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.94 |
0.95 |
1.72 |
1.90 |
0.00 |
0.87 |
230 |
| C |
1 |
3 |
1 |
0.50 |
0.33 |
0.99 |
1.32 |
0.98 |
0.98 |
1.95 |
1.84 |
0.00 |
0.91 |
165 |
| E |
4 |
9 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.15 |
1.00 |
1.74 |
1.46 |
0.00 |
0.95 |
1007 |
| M |
55 |
75 |
15 |
0.23 |
0.55 |
0.73 |
1.28 |
0.73 |
0.86 |
0.02 |
0.55 |
0.08 |
0.84 |
1088 |
| |
| Base Pair (822:878)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
158 |
170 |
119 |
0.73 |
0.94 |
0.96 |
1.91 |
0.96 |
0.97 |
-0.03 |
0.03 |
0.01 |
0.83 |
7200 |
| 3 |
100 |
99 |
91 |
0.92 |
0.99 |
0.99 |
1.98 |
0.99 |
0.99 |
0.02 |
0.01 |
0.00 |
0.83 |
5947 |
| B |
85 |
85 |
77 |
0.91 |
0.99 |
0.99 |
1.98 |
0.99 |
0.99 |
0.22 |
0.21 |
0.00 |
0.80 |
4703 |
| A |
8 |
8 |
8 |
1.00 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
1.18 |
1.12 |
0.00 |
0.87 |
230 |
| C |
8 |
8 |
6 |
0.75 |
0.79 |
0.98 |
1.77 |
0.98 |
1.00 |
1.63 |
1.58 |
0.00 |
0.91 |
165 |
| E |
7 |
6 |
6 |
0.92 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
1.08 |
1.11 |
0.00 |
0.96 |
1013 |
| M |
50 |
63 |
22 |
0.39 |
0.33 |
0.79 |
1.11 |
0.79 |
0.82 |
0.68 |
0.56 |
0.07 |
0.85 |
1093 |
| |
| Base Pair (823:877)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
164 |
178 |
130 |
0.76 |
0.98 |
0.99 |
1.97 |
0.99 |
0.99 |
-0.17 |
-0.02 |
0.03 |
0.81 |
7197 |
| 3 |
110 |
107 |
92 |
0.85 |
0.99 |
0.99 |
1.98 |
0.99 |
0.99 |
0.16 |
0.19 |
0.00 |
0.82 |
5944 |
| B |
98 |
93 |
82 |
0.86 |
0.99 |
0.99 |
1.98 |
0.99 |
0.99 |
0.16 |
0.18 |
0.00 |
0.80 |
4698 |
| A |
8 |
10 |
7 |
0.78 |
0.85 |
0.92 |
1.77 |
0.92 |
0.96 |
0.26 |
0.26 |
0.00 |
0.88 |
231 |
| C |
4 |
3 |
3 |
0.86 |
0.67 |
0.99 |
1.66 |
0.99 |
1.00 |
1.87 |
1.91 |
0.00 |
0.91 |
165 |
| E |
4 |
4 |
3 |
0.75 |
0.96 |
0.99 |
1.95 |
0.99 |
1.00 |
1.25 |
1.29 |
0.00 |
0.96 |
1015 |
| M |
50 |
68 |
35 |
0.59 |
0.86 |
0.95 |
1.82 |
0.95 |
0.96 |
-0.31 |
0.33 |
0.18 |
0.72 |
1093 |
| |
| Base Pair (824:876)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
191 |
242 |
148 |
0.68 |
0.86 |
0.91 |
1.77 |
0.91 |
0.94 |
-0.14 |
0.02 |
0.02 |
0.81 |
7182 |
| 3 |
135 |
158 |
112 |
0.77 |
0.84 |
0.91 |
1.75 |
0.91 |
0.94 |
0.10 |
0.11 |
0.00 |
0.82 |
5928 |
| B |
112 |
116 |
102 |
0.90 |
0.98 |
0.99 |
1.97 |
0.99 |
0.99 |
0.29 |
0.28 |
0.00 |
0.80 |
4686 |
| A |
5 |
6 |
4 |
0.73 |
0.98 |
0.99 |
1.96 |
0.99 |
1.00 |
0.28 |
0.30 |
0.00 |
0.87 |
231 |
| C |
9 |
10 |
8 |
0.84 |
0.92 |
0.99 |
1.91 |
0.99 |
0.99 |
1.23 |
1.19 |
0.00 |
0.91 |
165 |
| E |
18 |
36 |
6 |
0.22 |
0.21 |
0.50 |
0.71 |
0.50 |
0.69 |
1.17 |
0.29 |
0.00 |
0.96 |
1011 |
| M |
47 |
74 |
28 |
0.46 |
0.85 |
0.94 |
1.79 |
0.94 |
0.96 |
-0.36 |
0.07 |
0.17 |
0.71 |
1094 |
| |
| Base Pair (825:875)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
138 |
170 |
101 |
0.66 |
0.94 |
0.98 |
1.92 |
0.98 |
0.98 |
0.52 |
0.65 |
0.02 |
0.82 |
7207 |
| 3 |
75 |
71 |
62 |
0.85 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.98 |
0.99 |
0.00 |
0.83 |
5954 |
| B |
62 |
58 |
53 |
0.88 |
0.98 |
0.99 |
1.98 |
0.99 |
0.99 |
1.01 |
1.02 |
0.00 |
0.80 |
4708 |
| A |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.10 |
1.10 |
0.00 |
0.88 |
231 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.95 |
2.00 |
0.00 |
0.91 |
165 |
| E |
9 |
9 |
6 |
0.67 |
0.79 |
0.97 |
1.77 |
0.97 |
0.97 |
1.25 |
1.29 |
0.00 |
0.96 |
1015 |
| M |
63 |
99 |
39 |
0.48 |
0.84 |
0.89 |
1.73 |
0.89 |
0.91 |
-0.76 |
-0.29 |
0.17 |
0.71 |
1093 |
| |
| Base Pair (826:874)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
87 |
87 |
53 |
0.61 |
0.88 |
0.98 |
1.86 |
0.98 |
0.98 |
1.02 |
1.00 |
0.02 |
0.82 |
7237 |
| 3 |
28 |
29 |
24 |
0.84 |
0.94 |
0.99 |
1.94 |
0.99 |
1.00 |
1.55 |
1.54 |
0.00 |
0.83 |
5985 |
| B |
22 |
24 |
20 |
0.87 |
0.95 |
0.99 |
1.95 |
0.99 |
1.00 |
1.51 |
1.49 |
0.00 |
0.81 |
4737 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.52 |
1.52 |
0.00 |
0.88 |
231 |
| C |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.72 |
1.66 |
0.01 |
0.90 |
165 |
| E |
4 |
3 |
2 |
0.57 |
0.53 |
0.99 |
1.52 |
0.99 |
0.99 |
1.86 |
1.86 |
0.00 |
0.96 |
1017 |
| M |
57 |
56 |
27 |
0.48 |
0.56 |
0.86 |
1.42 |
0.86 |
0.90 |
-0.09 |
-0.06 |
0.12 |
0.71 |
1092 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)