16S rRNA Model Base Pair Collective Scoring Data for Helical Element 885
| Base Pair (885:912)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
26 |
36 |
11 |
0.35 |
0.05 |
0.00 |
0.05 |
0.80 |
1.00 |
1.85 |
1.19 |
0.00 |
0.79 |
6769 |
| 3 |
4 |
13 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.76 |
1.00 |
1.95 |
1.18 |
0.00 |
0.76 |
5468 |
| B |
4 |
9 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
1.00 |
1.94 |
1.80 |
0.00 |
0.72 |
4258 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
2.00 |
1.93 |
0.00 |
0.82 |
217 |
| C |
0 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
1.00 |
2.00 |
1.77 |
0.00 |
0.89 |
162 |
| E |
0 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.99 |
1.97 |
0.00 |
0.94 |
993 |
| M |
22 |
20 |
11 |
0.52 |
0.62 |
0.96 |
1.57 |
0.96 |
0.99 |
1.49 |
1.41 |
0.00 |
0.98 |
1144 |
| |
| Base Pair (886:911)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
46 |
26 |
17 |
0.47 |
0.01 |
0.00 |
0.01 |
0.19 |
1.00 |
1.38 |
1.70 |
0.00 |
0.80 |
6853 |
| 3 |
9 |
3 |
1 |
0.17 |
0.01 |
0.00 |
0.01 |
0.04 |
1.00 |
1.74 |
1.97 |
0.00 |
0.77 |
5549 |
| B |
8 |
3 |
1 |
0.18 |
0.01 |
0.00 |
0.01 |
0.05 |
1.00 |
1.69 |
1.96 |
0.00 |
0.74 |
4340 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
1.93 |
2.00 |
0.00 |
0.82 |
217 |
| C |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.08 |
1.00 |
1.60 |
2.00 |
0.00 |
0.90 |
163 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.98 |
2.00 |
0.00 |
0.94 |
992 |
| M |
35 |
23 |
16 |
0.55 |
0.82 |
0.94 |
1.77 |
0.94 |
0.99 |
1.07 |
1.12 |
0.00 |
0.99 |
1146 |
| |
| Base Pair (887:910)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
34 |
38 |
12 |
0.33 |
0.23 |
0.97 |
1.20 |
0.97 |
0.97 |
1.75 |
1.83 |
0.00 |
0.80 |
6855 |
| 3 |
6 |
7 |
1 |
0.15 |
0.56 |
0.99 |
1.55 |
0.99 |
0.99 |
1.87 |
1.89 |
0.00 |
0.77 |
5553 |
| B |
5 |
5 |
1 |
0.20 |
0.07 |
0.00 |
0.07 |
1.00 |
1.00 |
1.97 |
1.97 |
0.00 |
0.74 |
4345 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.82 |
216 |
| C |
3 |
2 |
1 |
0.40 |
0.57 |
0.98 |
1.55 |
0.98 |
0.99 |
1.80 |
1.77 |
0.00 |
0.90 |
163 |
| E |
1 |
2 |
0 |
0.00 |
0.65 |
0.97 |
1.63 |
0.95 |
0.95 |
1.53 |
1.61 |
0.00 |
0.94 |
992 |
| M |
25 |
29 |
10 |
0.37 |
0.11 |
0.00 |
0.11 |
0.87 |
0.88 |
1.29 |
1.67 |
0.00 |
0.98 |
1144 |
| |
|
| Base Pair (894:905)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
78 |
40 |
11 |
0.19 |
0.15 |
0.00 |
0.15 |
0.04 |
0.94 |
1.45 |
1.76 |
0.00 |
0.81 |
6864 |
| 3 |
13 |
14 |
5 |
0.37 |
0.26 |
0.98 |
1.24 |
0.02 |
0.99 |
1.84 |
1.87 |
0.00 |
0.77 |
5554 |
| B |
8 |
9 |
0 |
0.00 |
0.01 |
0.00 |
0.01 |
0.01 |
1.00 |
1.90 |
1.91 |
0.00 |
0.74 |
4346 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
0.00 |
0.99 |
1.96 |
1.96 |
0.00 |
0.83 |
219 |
| C |
5 |
1 |
1 |
0.33 |
0.10 |
0.00 |
0.10 |
0.04 |
0.98 |
1.67 |
1.89 |
0.00 |
0.89 |
162 |
| E |
4 |
4 |
4 |
1.00 |
0.76 |
0.99 |
1.75 |
0.03 |
0.99 |
1.73 |
1.71 |
0.00 |
0.94 |
989 |
| M |
60 |
25 |
5 |
0.12 |
0.12 |
0.00 |
0.12 |
0.17 |
0.69 |
0.46 |
1.41 |
0.00 |
0.99 |
1153 |
| |
| Base Pair (895:904)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
145 |
155 |
85 |
0.57 |
0.56 |
0.72 |
1.27 |
0.72 |
0.99 |
0.52 |
0.35 |
0.00 |
0.81 |
6950 |
| 3 |
102 |
114 |
63 |
0.58 |
0.41 |
0.67 |
1.07 |
0.67 |
0.99 |
0.83 |
0.34 |
0.00 |
0.78 |
5637 |
| B |
85 |
97 |
50 |
0.55 |
0.30 |
0.59 |
0.89 |
0.58 |
0.99 |
0.76 |
0.33 |
0.00 |
0.75 |
4427 |
| A |
6 |
7 |
6 |
0.92 |
0.98 |
0.99 |
1.98 |
0.99 |
0.99 |
1.03 |
1.00 |
0.00 |
0.83 |
219 |
| C |
8 |
10 |
7 |
0.78 |
0.92 |
0.96 |
1.88 |
0.96 |
0.97 |
0.89 |
0.80 |
0.00 |
0.91 |
165 |
| E |
11 |
10 |
7 |
0.67 |
0.70 |
0.96 |
1.67 |
0.96 |
1.00 |
1.31 |
1.37 |
0.00 |
0.94 |
991 |
| M |
35 |
31 |
15 |
0.46 |
0.53 |
0.94 |
1.47 |
0.94 |
0.97 |
1.42 |
1.46 |
0.00 |
0.99 |
1153 |
| |
| Base Pair (896:903)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
140 |
156 |
99 |
0.67 |
0.75 |
0.84 |
1.59 |
0.84 |
0.99 |
0.34 |
0.31 |
0.00 |
0.81 |
6977 |
| 3 |
115 |
119 |
82 |
0.70 |
0.67 |
0.81 |
1.48 |
0.81 |
0.99 |
0.69 |
0.70 |
0.00 |
0.79 |
5664 |
| B |
101 |
93 |
73 |
0.75 |
0.92 |
0.96 |
1.88 |
0.96 |
0.99 |
0.72 |
0.67 |
0.01 |
0.76 |
4456 |
| A |
10 |
10 |
7 |
0.70 |
0.69 |
0.89 |
1.58 |
0.89 |
0.99 |
0.78 |
0.90 |
0.00 |
0.83 |
220 |
| C |
5 |
11 |
4 |
0.50 |
0.27 |
0.89 |
1.15 |
0.89 |
0.99 |
1.71 |
1.23 |
0.00 |
0.91 |
165 |
| E |
4 |
16 |
2 |
0.20 |
0.29 |
0.89 |
1.18 |
0.13 |
0.97 |
1.58 |
1.16 |
0.00 |
0.94 |
988 |
| M |
20 |
26 |
13 |
0.56 |
0.80 |
0.98 |
1.78 |
0.98 |
0.99 |
1.41 |
1.34 |
0.00 |
0.99 |
1153 |
| |
| Base Pair (897:902)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
61 |
44 |
30 |
0.57 |
0.73 |
0.98 |
1.71 |
0.98 |
0.99 |
1.57 |
1.56 |
0.00 |
0.82 |
6991 |
| 3 |
28 |
23 |
14 |
0.55 |
0.77 |
0.99 |
1.76 |
0.99 |
0.99 |
1.63 |
1.65 |
0.00 |
0.79 |
5679 |
| B |
19 |
18 |
11 |
0.59 |
0.68 |
0.99 |
1.67 |
0.99 |
0.99 |
1.81 |
1.80 |
0.00 |
0.76 |
4470 |
| A |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.95 |
1.00 |
1.73 |
2.00 |
0.00 |
0.83 |
220 |
| C |
6 |
4 |
4 |
0.80 |
0.85 |
0.99 |
1.83 |
0.99 |
1.00 |
1.60 |
1.65 |
0.00 |
0.90 |
164 |
| E |
7 |
5 |
3 |
0.50 |
0.94 |
0.99 |
1.93 |
0.99 |
1.00 |
1.31 |
1.29 |
0.00 |
0.94 |
989 |
| M |
27 |
17 |
12 |
0.55 |
0.63 |
0.95 |
1.58 |
0.94 |
0.95 |
1.25 |
1.25 |
0.00 |
0.99 |
1153 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)