16S rRNA Model Base Pair Collective Scoring Data for Helical Element 984
| Base Pair (984:1221)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
7 |
7 |
3 |
0.43 |
0.32 |
1.00 |
1.32 |
1.00 |
1.00 |
1.97 |
1.96 |
0.00 |
0.80 |
6849 |
| 3 |
1 |
0 |
0 |
0.00 |
0.40 |
0.00 |
0.40 |
1.00 |
1.00 |
1.98 |
1.97 |
0.00 |
0.77 |
5541 |
| B |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.99 |
1.99 |
0.00 |
0.74 |
4327 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.75 |
198 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.95 |
1.95 |
0.00 |
0.89 |
161 |
| E |
0 |
0 |
0 |
0.00 |
0.80 |
1.00 |
1.80 |
1.00 |
1.00 |
1.94 |
1.95 |
0.00 |
0.96 |
1010 |
| M |
5 |
6 |
2 |
0.36 |
0.13 |
0.00 |
0.13 |
0.99 |
0.99 |
1.93 |
1.92 |
0.00 |
0.99 |
1152 |
| |
| Base Pair (985:1220)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
13 |
14 |
8 |
0.59 |
0.78 |
1.00 |
1.77 |
1.00 |
1.00 |
1.86 |
1.83 |
0.00 |
0.79 |
6767 |
| 3 |
3 |
2 |
0 |
0.00 |
0.74 |
1.00 |
1.74 |
1.00 |
1.00 |
1.91 |
1.90 |
0.00 |
0.76 |
5460 |
| B |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.99 |
1.99 |
0.00 |
0.73 |
4252 |
| A |
1 |
0 |
0 |
0.00 |
0.25 |
0.98 |
1.24 |
0.98 |
1.00 |
1.86 |
1.96 |
0.00 |
0.74 |
196 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
2.00 |
1.87 |
0.00 |
0.89 |
161 |
| E |
1 |
2 |
0 |
0.00 |
0.86 |
0.99 |
1.86 |
0.99 |
0.99 |
1.66 |
1.63 |
0.00 |
0.95 |
1008 |
| M |
10 |
12 |
8 |
0.73 |
0.86 |
0.99 |
1.85 |
0.99 |
0.99 |
1.66 |
1.63 |
0.00 |
0.99 |
1151 |
| |
| Base Pair (986:1219)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
163 |
163 |
123 |
0.76 |
0.94 |
0.98 |
1.92 |
0.98 |
0.98 |
0.63 |
0.61 |
0.00 |
0.80 |
6840 |
| 3 |
79 |
84 |
73 |
0.90 |
0.98 |
0.99 |
1.97 |
0.99 |
0.99 |
0.65 |
0.64 |
0.00 |
0.77 |
5533 |
| B |
65 |
68 |
60 |
0.90 |
0.99 |
0.99 |
1.98 |
0.99 |
0.99 |
0.75 |
0.74 |
0.00 |
0.74 |
4321 |
| A |
10 |
12 |
9 |
0.82 |
0.95 |
0.97 |
1.93 |
0.97 |
1.00 |
0.53 |
0.52 |
0.00 |
0.75 |
197 |
| C |
4 |
3 |
3 |
0.86 |
0.50 |
0.99 |
1.49 |
0.99 |
0.99 |
1.89 |
1.95 |
0.00 |
0.89 |
161 |
| E |
4 |
4 |
3 |
0.75 |
0.88 |
0.99 |
1.87 |
0.99 |
0.99 |
1.50 |
1.50 |
0.00 |
0.95 |
1010 |
| M |
80 |
76 |
47 |
0.60 |
0.72 |
0.90 |
1.62 |
0.90 |
0.92 |
0.65 |
0.64 |
0.00 |
0.99 |
1151 |
| |
| Base Pair (987:1218)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
203 |
220 |
156 |
0.74 |
0.94 |
0.97 |
1.91 |
0.97 |
0.98 |
0.45 |
0.44 |
0.00 |
0.80 |
6832 |
| 3 |
88 |
96 |
76 |
0.83 |
0.96 |
0.99 |
1.95 |
0.99 |
0.99 |
0.93 |
0.91 |
0.00 |
0.77 |
5525 |
| B |
81 |
83 |
71 |
0.87 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.84 |
0.84 |
0.00 |
0.73 |
4310 |
| A |
1 |
4 |
1 |
0.40 |
0.10 |
0.00 |
0.10 |
0.95 |
1.00 |
1.96 |
1.70 |
0.00 |
0.75 |
198 |
| C |
8 |
8 |
7 |
0.88 |
0.88 |
0.99 |
1.87 |
0.99 |
0.99 |
1.46 |
1.53 |
0.00 |
0.89 |
161 |
| E |
6 |
9 |
4 |
0.53 |
0.51 |
0.97 |
1.48 |
0.97 |
0.98 |
1.80 |
1.65 |
0.00 |
0.96 |
1010 |
| M |
107 |
116 |
73 |
0.66 |
0.81 |
0.90 |
1.72 |
0.90 |
0.93 |
0.39 |
0.38 |
0.00 |
0.99 |
1151 |
| |
| Base Pair (988:1217)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
133 |
167 |
83 |
0.55 |
0.72 |
0.85 |
1.57 |
0.85 |
0.98 |
0.55 |
0.25 |
0.00 |
0.80 |
6852 |
| 3 |
48 |
78 |
36 |
0.57 |
0.63 |
0.84 |
1.47 |
0.84 |
0.99 |
0.93 |
0.53 |
0.00 |
0.77 |
5544 |
| B |
39 |
58 |
30 |
0.62 |
0.90 |
0.96 |
1.86 |
0.96 |
1.00 |
0.91 |
0.83 |
0.00 |
0.74 |
4333 |
| A |
3 |
4 |
3 |
0.86 |
0.91 |
0.97 |
1.88 |
0.97 |
1.00 |
0.68 |
0.65 |
0.00 |
0.75 |
198 |
| C |
6 |
10 |
4 |
0.50 |
0.53 |
0.91 |
1.44 |
0.91 |
0.98 |
1.38 |
1.18 |
0.00 |
0.89 |
161 |
| E |
6 |
16 |
3 |
0.27 |
0.17 |
0.00 |
0.17 |
0.28 |
0.98 |
1.42 |
0.92 |
0.00 |
0.95 |
1008 |
| M |
79 |
79 |
43 |
0.54 |
0.85 |
0.92 |
1.77 |
0.92 |
0.95 |
0.57 |
0.58 |
0.00 |
0.99 |
1152 |
| |
| Base Pair (989:1216)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
245 |
250 |
116 |
0.47 |
0.55 |
0.67 |
1.22 |
0.61 |
0.85 |
0.18 |
0.14 |
0.00 |
0.80 |
6812 |
| 3 |
134 |
131 |
60 |
0.45 |
0.52 |
0.65 |
1.18 |
0.54 |
0.83 |
0.20 |
0.21 |
0.00 |
0.76 |
5504 |
| B |
109 |
109 |
45 |
0.41 |
0.70 |
0.80 |
1.50 |
0.64 |
0.99 |
0.20 |
0.12 |
0.00 |
0.73 |
4294 |
| A |
10 |
12 |
9 |
0.82 |
0.68 |
0.80 |
1.48 |
0.80 |
0.99 |
0.43 |
0.34 |
0.00 |
0.75 |
198 |
| C |
12 |
18 |
10 |
0.67 |
0.69 |
0.89 |
1.58 |
0.89 |
1.00 |
1.16 |
1.01 |
0.00 |
0.89 |
161 |
| E |
15 |
10 |
6 |
0.48 |
0.04 |
0.00 |
0.04 |
0.07 |
0.10 |
0.97 |
1.50 |
0.00 |
0.95 |
1007 |
| M |
99 |
101 |
46 |
0.46 |
0.74 |
0.87 |
1.61 |
0.87 |
0.92 |
0.66 |
0.62 |
0.00 |
0.99 |
1152 |
| |
| Base Pair (990:1215)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
156 |
114 |
69 |
0.51 |
0.44 |
0.88 |
1.32 |
0.88 |
0.99 |
1.10 |
1.41 |
0.00 |
0.80 |
6833 |
| 3 |
82 |
46 |
23 |
0.36 |
0.35 |
0.87 |
1.23 |
0.87 |
0.99 |
1.13 |
1.50 |
0.00 |
0.77 |
5528 |
| B |
71 |
35 |
16 |
0.30 |
0.23 |
0.85 |
1.08 |
0.85 |
0.99 |
1.24 |
1.69 |
0.00 |
0.74 |
4321 |
| A |
5 |
4 |
3 |
0.67 |
0.70 |
0.90 |
1.60 |
0.90 |
0.98 |
0.59 |
0.67 |
0.00 |
0.75 |
198 |
| C |
15 |
15 |
14 |
0.93 |
0.86 |
0.94 |
1.80 |
0.94 |
0.96 |
0.89 |
1.05 |
0.00 |
0.89 |
161 |
| E |
6 |
7 |
4 |
0.61 |
0.48 |
0.97 |
1.45 |
0.97 |
0.98 |
1.66 |
1.69 |
0.00 |
0.95 |
1004 |
| M |
59 |
53 |
32 |
0.57 |
0.67 |
0.91 |
1.58 |
0.91 |
0.98 |
1.09 |
1.21 |
0.00 |
0.99 |
1149 |
| |
Last generated : Fri Jun 16 2000 (14 : 29)