23S rRNA Model Base Pair Collective Scoring Data for Helical Element 1682
| Base Pair (1682:1706)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
25 |
26 |
13 |
0.51 |
0.23 |
0.59 |
0.82 |
0.50 |
0.97 |
-0.40 |
-0.37 |
0.00 |
0.58 |
836 |
| 3 |
14 |
13 |
9 |
0.67 |
0.30 |
0.66 |
0.96 |
0.48 |
1.00 |
0.60 |
0.75 |
0.00 |
0.72 |
458 |
| B |
13 |
12 |
9 |
0.72 |
0.73 |
0.82 |
1.55 |
0.82 |
0.99 |
0.22 |
0.32 |
0.00 |
0.80 |
262 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.05 |
1.00 |
1.83 |
1.83 |
0.00 |
1.00 |
41 |
| C |
6 |
5 |
1 |
0.18 |
0.00 |
0.00 |
0.00 |
0.58 |
1.00 |
1.26 |
1.04 |
0.00 |
0.98 |
101 |
| E |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
1.90 |
2.00 |
0.00 |
0.59 |
155 |
| M |
5 |
8 |
3 |
0.46 |
0.24 |
0.53 |
0.77 |
0.53 |
0.70 |
-0.56 |
-0.57 |
0.00 |
0.15 |
277 |
| |
| Base Pair (1683:1705)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
24 |
24 |
1.00 |
0.99 |
0.99 |
1.98 |
0.99 |
1.00 |
-0.44 |
-0.43 |
0.00 |
0.58 |
835 |
| 3 |
19 |
19 |
19 |
1.00 |
1.00 |
1.00 |
1.99 |
1.00 |
1.00 |
0.46 |
0.47 |
0.00 |
0.72 |
457 |
| B |
14 |
14 |
14 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.79 |
0.79 |
0.00 |
0.80 |
261 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.20 |
1.20 |
0.00 |
1.00 |
41 |
| C |
1 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.66 |
1.66 |
0.00 |
0.97 |
101 |
| E |
2 |
2 |
2 |
1.00 |
0.88 |
0.99 |
1.87 |
0.99 |
1.00 |
1.69 |
1.74 |
0.00 |
0.59 |
155 |
| M |
3 |
3 |
3 |
1.00 |
0.78 |
0.96 |
1.74 |
0.96 |
0.98 |
-0.48 |
-0.48 |
0.00 |
0.15 |
277 |
| |
| Base Pair (1684:1704)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
20 |
21 |
17 |
0.83 |
0.96 |
0.98 |
1.95 |
0.98 |
1.00 |
-0.53 |
-0.53 |
0.00 |
0.58 |
836 |
| 3 |
15 |
15 |
13 |
0.87 |
0.97 |
0.98 |
1.95 |
0.98 |
1.00 |
0.32 |
0.33 |
0.00 |
0.73 |
458 |
| B |
11 |
10 |
9 |
0.86 |
0.95 |
0.98 |
1.93 |
0.98 |
1.00 |
0.35 |
0.40 |
0.00 |
0.80 |
262 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.72 |
1.72 |
0.00 |
1.00 |
41 |
| C |
3 |
2 |
2 |
0.80 |
0.83 |
0.99 |
1.82 |
0.99 |
1.00 |
1.68 |
1.72 |
0.00 |
0.98 |
101 |
| E |
2 |
3 |
2 |
0.80 |
0.90 |
0.99 |
1.89 |
0.99 |
1.00 |
1.49 |
1.45 |
0.00 |
0.59 |
155 |
| M |
2 |
4 |
2 |
0.67 |
0.89 |
0.96 |
1.85 |
0.96 |
1.00 |
-0.47 |
-0.48 |
0.00 |
0.15 |
277 |
| |
| Base Pair (1685:1703)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
19 |
18 |
16 |
0.86 |
0.86 |
0.99 |
1.85 |
0.99 |
0.99 |
0.19 |
0.22 |
0.00 |
0.58 |
836 |
| 3 |
8 |
7 |
6 |
0.80 |
0.81 |
0.99 |
1.80 |
0.99 |
1.00 |
1.53 |
1.60 |
0.00 |
0.73 |
458 |
| B |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.49 |
1.49 |
0.00 |
0.80 |
262 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
6 |
7 |
6 |
0.92 |
0.92 |
0.99 |
1.91 |
0.99 |
0.99 |
1.47 |
1.45 |
0.00 |
0.98 |
101 |
| E |
4 |
3 |
2 |
0.57 |
0.50 |
0.96 |
1.46 |
0.96 |
0.99 |
1.52 |
1.72 |
0.00 |
0.59 |
155 |
| M |
5 |
4 |
4 |
0.89 |
0.92 |
0.98 |
1.90 |
0.98 |
0.98 |
-0.50 |
-0.47 |
0.00 |
0.15 |
277 |
| |
| Base Pair (1686:1702)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
19 |
14 |
9 |
0.55 |
0.54 |
0.96 |
1.49 |
0.96 |
1.00 |
0.28 |
0.39 |
0.00 |
0.58 |
836 |
| 3 |
10 |
5 |
3 |
0.40 |
0.47 |
0.96 |
1.43 |
0.96 |
1.00 |
1.65 |
1.80 |
0.00 |
0.73 |
458 |
| B |
3 |
2 |
0 |
0.00 |
0.33 |
0.97 |
1.30 |
0.97 |
1.00 |
1.73 |
1.89 |
0.00 |
0.80 |
262 |
| A |
3 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.85 |
1.00 |
1.40 |
2.00 |
0.00 |
1.00 |
41 |
| C |
4 |
2 |
2 |
0.67 |
0.71 |
0.98 |
1.69 |
0.98 |
1.00 |
1.64 |
1.72 |
0.00 |
0.98 |
101 |
| E |
4 |
3 |
3 |
0.86 |
0.83 |
0.99 |
1.82 |
0.99 |
1.00 |
1.61 |
1.66 |
0.00 |
0.59 |
155 |
| M |
5 |
7 |
4 |
0.67 |
0.58 |
0.83 |
1.41 |
0.83 |
0.98 |
-0.50 |
-0.46 |
0.00 |
0.15 |
277 |
| |
|
| Base Pair (1690:1697) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
15 |
36 |
10 |
0.39 |
0.36 |
0.83 |
1.20 |
0.01 |
0.01 |
0.15 |
-0.16 |
0.00 |
0.58 |
836 |
| 3 |
11 |
19 |
7 |
0.47 |
0.52 |
0.91 |
1.43 |
0.00 |
0.01 |
1.33 |
1.06 |
0.00 |
0.72 |
458 |
| B |
5 |
11 |
2 |
0.25 |
0.55 |
0.89 |
1.44 |
0.00 |
0.00 |
1.33 |
0.90 |
0.00 |
0.80 |
262 |
| A |
4 |
4 |
4 |
1.00 |
0.67 |
0.88 |
1.54 |
0.00 |
0.05 |
0.55 |
0.69 |
0.00 |
1.00 |
41 |
| C |
1 |
10 |
1 |
0.18 |
0.02 |
0.00 |
0.02 |
0.01 |
0.01 |
1.82 |
0.84 |
0.00 |
0.97 |
101 |
| E |
2 |
4 |
1 |
0.33 |
0.20 |
0.00 |
0.20 |
0.00 |
0.01 |
1.84 |
1.61 |
0.00 |
0.59 |
155 |
| M |
3 |
7 |
2 |
0.40 |
0.50 |
0.81 |
1.31 |
0.04 |
0.04 |
-0.44 |
-0.51 |
0.00 |
0.15 |
277 |
| |
| Base Pair (1691:1696)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
13 |
12 |
11 |
0.88 |
0.83 |
0.99 |
1.82 |
0.99 |
0.99 |
0.28 |
0.33 |
0.00 |
0.58 |
835 |
| 3 |
9 |
9 |
8 |
0.89 |
0.79 |
0.98 |
1.77 |
0.98 |
0.98 |
1.59 |
1.66 |
0.00 |
0.72 |
457 |
| B |
5 |
5 |
4 |
0.80 |
0.74 |
0.98 |
1.72 |
0.98 |
0.98 |
1.52 |
1.57 |
0.00 |
0.80 |
261 |
| A |
1 |
1 |
1 |
1.00 |
0.80 |
0.98 |
1.78 |
0.98 |
0.98 |
1.47 |
1.54 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.79 |
1.79 |
0.00 |
0.59 |
155 |
| M |
4 |
3 |
3 |
0.86 |
0.93 |
0.98 |
1.91 |
0.98 |
1.00 |
-0.50 |
-0.48 |
0.00 |
0.15 |
277 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)