23S rRNA Model Base Pair Collective Scoring Data for Helical Element 1707
| Base Pair (1707:1751)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
21 |
35 |
10 |
0.36 |
0.05 |
0.00 |
0.05 |
0.40 |
0.98 |
0.06 |
-0.18 |
0.00 |
0.56 |
833 |
| 3 |
10 |
17 |
4 |
0.30 |
0.07 |
0.00 |
0.07 |
0.35 |
0.99 |
1.42 |
0.97 |
0.00 |
0.72 |
455 |
| B |
9 |
13 |
4 |
0.36 |
0.27 |
0.59 |
0.86 |
0.59 |
0.98 |
1.12 |
0.79 |
0.01 |
0.79 |
259 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.02 |
1.00 |
2.00 |
1.83 |
0.00 |
1.00 |
41 |
| C |
8 |
16 |
5 |
0.42 |
0.02 |
0.00 |
0.02 |
0.49 |
0.99 |
1.23 |
1.14 |
0.00 |
0.98 |
101 |
| E |
1 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.03 |
1.00 |
1.90 |
1.79 |
0.00 |
0.59 |
155 |
| M |
3 |
2 |
1 |
0.40 |
0.57 |
0.74 |
1.31 |
0.74 |
0.91 |
-0.44 |
-0.48 |
0.00 |
0.11 |
277 |
| |
| Base Pair (1708:1750)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
7 |
8 |
5 |
0.67 |
0.96 |
0.99 |
1.95 |
0.99 |
0.99 |
-0.14 |
-0.19 |
0.00 |
0.56 |
834 |
| 3 |
2 |
1 |
1 |
0.67 |
0.98 |
0.99 |
1.98 |
0.99 |
0.99 |
1.05 |
0.96 |
0.00 |
0.72 |
456 |
| B |
2 |
1 |
1 |
0.67 |
0.83 |
0.99 |
1.82 |
0.99 |
0.99 |
1.67 |
1.57 |
0.00 |
0.79 |
260 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.79 |
0.02 |
0.98 |
41 |
| C |
2 |
4 |
1 |
0.33 |
0.33 |
0.96 |
1.29 |
0.96 |
0.98 |
1.76 |
1.49 |
0.01 |
0.97 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.59 |
155 |
| M |
2 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
-0.43 |
-0.43 |
0.00 |
0.11 |
277 |
| |
| Base Pair (1709:1749)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
22 |
23 |
21 |
0.93 |
0.48 |
0.73 |
1.22 |
0.73 |
0.73 |
-0.09 |
-0.24 |
0.00 |
0.56 |
833 |
| 3 |
13 |
13 |
11 |
0.85 |
0.43 |
0.65 |
1.08 |
0.65 |
0.65 |
1.15 |
0.95 |
0.00 |
0.72 |
455 |
| B |
13 |
13 |
11 |
0.85 |
0.97 |
0.98 |
1.95 |
0.98 |
0.98 |
0.97 |
0.94 |
0.00 |
0.79 |
259 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
7 |
7 |
7 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.50 |
1.50 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
2.00 |
1.88 |
0.01 |
0.58 |
155 |
| M |
2 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
-0.46 |
-0.46 |
0.00 |
0.10 |
277 |
| |
| Base Pair (1710:1748)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
47 |
47 |
37 |
0.79 |
0.86 |
0.93 |
1.78 |
0.93 |
0.98 |
-0.58 |
-0.59 |
0.00 |
0.56 |
834 |
| 3 |
27 |
27 |
20 |
0.74 |
0.88 |
0.94 |
1.82 |
0.94 |
0.99 |
0.49 |
0.41 |
0.00 |
0.72 |
456 |
| B |
23 |
23 |
16 |
0.70 |
0.82 |
0.90 |
1.72 |
0.90 |
0.98 |
0.25 |
0.27 |
0.00 |
0.80 |
260 |
| A |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.17 |
1.17 |
0.00 |
1.00 |
41 |
| C |
15 |
15 |
13 |
0.87 |
0.84 |
0.92 |
1.76 |
0.92 |
0.99 |
0.43 |
0.47 |
0.00 |
0.97 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.93 |
0.00 |
0.59 |
155 |
| M |
5 |
5 |
4 |
0.80 |
0.50 |
0.69 |
1.19 |
0.69 |
0.72 |
-0.45 |
-0.44 |
0.00 |
0.09 |
277 |
| |
| Base Pair (1711:1747)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
46 |
42 |
23 |
0.52 |
0.79 |
0.88 |
1.67 |
0.88 |
0.97 |
-0.85 |
-0.80 |
0.00 |
0.51 |
836 |
| 3 |
29 |
25 |
14 |
0.52 |
0.78 |
0.88 |
1.66 |
0.88 |
0.97 |
-0.31 |
-0.21 |
0.00 |
0.65 |
458 |
| B |
25 |
21 |
10 |
0.43 |
0.71 |
0.79 |
1.50 |
0.79 |
0.96 |
-0.61 |
-0.59 |
0.01 |
0.65 |
262 |
| A |
2 |
1 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.24 |
1.24 |
0.00 |
1.00 |
41 |
| C |
15 |
12 |
8 |
0.59 |
0.85 |
0.92 |
1.77 |
0.92 |
0.99 |
0.04 |
-0.02 |
0.02 |
0.92 |
101 |
| E |
2 |
3 |
2 |
0.80 |
0.25 |
0.98 |
1.23 |
0.98 |
0.98 |
1.90 |
1.74 |
0.00 |
0.59 |
155 |
| M |
2 |
5 |
1 |
0.29 |
0.47 |
0.69 |
1.16 |
0.69 |
0.81 |
-0.40 |
-0.41 |
0.00 |
0.08 |
277 |
| |
| Base Pair (1712:1746)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
38 |
36 |
26 |
0.70 |
0.62 |
0.80 |
1.42 |
0.80 |
0.87 |
-0.78 |
-0.66 |
0.00 |
0.46 |
835 |
| 3 |
22 |
22 |
14 |
0.64 |
0.55 |
0.78 |
1.33 |
0.78 |
0.85 |
-0.32 |
-0.13 |
0.01 |
0.59 |
457 |
| B |
14 |
15 |
7 |
0.48 |
0.42 |
0.55 |
0.97 |
0.55 |
0.68 |
-0.85 |
-0.57 |
0.01 |
0.55 |
261 |
| A |
4 |
3 |
3 |
0.86 |
0.83 |
0.98 |
1.81 |
0.98 |
1.00 |
1.40 |
1.47 |
0.00 |
1.00 |
41 |
| C |
13 |
11 |
9 |
0.75 |
0.77 |
0.86 |
1.64 |
0.86 |
0.96 |
-0.55 |
-0.43 |
0.03 |
0.79 |
101 |
| E |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.83 |
1.76 |
0.00 |
0.59 |
155 |
| M |
3 |
3 |
3 |
1.00 |
0.82 |
0.91 |
1.73 |
0.91 |
1.00 |
-0.36 |
-0.35 |
0.00 |
0.07 |
277 |
| |
|
| Base Pair (1716:1743)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
28 |
10 |
0.36 |
0.47 |
0.59 |
1.06 |
0.59 |
0.84 |
-0.82 |
-0.81 |
0.00 |
0.20 |
836 |
| 3 |
23 |
24 |
9 |
0.38 |
0.48 |
0.62 |
1.10 |
0.62 |
0.87 |
-0.93 |
-0.88 |
0.02 |
0.30 |
458 |
| B |
19 |
20 |
6 |
0.31 |
0.36 |
0.52 |
0.88 |
0.52 |
0.85 |
-0.89 |
-0.83 |
0.03 |
0.45 |
262 |
| A |
4 |
4 |
3 |
0.75 |
0.91 |
0.95 |
1.86 |
0.95 |
0.95 |
0.31 |
0.48 |
0.00 |
1.00 |
41 |
| C |
2 |
3 |
0 |
0.00 |
0.30 |
0.50 |
0.80 |
0.21 |
0.50 |
-0.54 |
-0.65 |
0.13 |
0.14 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
-0.04 |
-0.04 |
0.00 |
0.00 |
155 |
| M |
2 |
1 |
1 |
0.67 |
0.43 |
0.64 |
1.06 |
0.64 |
0.82 |
-0.23 |
-0.24 |
0.00 |
0.04 |
277 |
| |
| Base Pair (1717:1742)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
24 |
12 |
0.51 |
0.66 |
0.74 |
1.40 |
0.74 |
0.90 |
-0.82 |
-0.82 |
0.01 |
0.20 |
836 |
| 3 |
20 |
21 |
11 |
0.54 |
0.69 |
0.77 |
1.46 |
0.77 |
0.93 |
-0.97 |
-0.97 |
0.02 |
0.30 |
458 |
| B |
15 |
16 |
7 |
0.45 |
0.63 |
0.71 |
1.34 |
0.71 |
0.92 |
-0.92 |
-0.96 |
0.04 |
0.45 |
262 |
| A |
5 |
5 |
4 |
0.80 |
0.88 |
0.95 |
1.83 |
0.95 |
0.95 |
0.45 |
0.45 |
0.00 |
1.00 |
41 |
| C |
2 |
2 |
0 |
0.00 |
0.38 |
0.50 |
0.88 |
0.50 |
0.70 |
-0.45 |
-0.62 |
0.07 |
0.10 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
-0.04 |
-0.04 |
0.00 |
0.00 |
155 |
| M |
1 |
1 |
1 |
1.00 |
0.29 |
0.55 |
0.83 |
0.46 |
0.55 |
-0.25 |
-0.20 |
0.00 |
0.04 |
277 |
| |
| Base Pair (1718:1741)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
26 |
22 |
9 |
0.38 |
0.55 |
0.67 |
1.23 |
0.67 |
0.88 |
-0.71 |
-0.81 |
0.00 |
0.19 |
836 |
| 3 |
23 |
18 |
8 |
0.39 |
0.57 |
0.69 |
1.26 |
0.69 |
0.91 |
-0.78 |
-0.95 |
0.00 |
0.29 |
458 |
| B |
17 |
12 |
5 |
0.34 |
0.37 |
0.58 |
0.95 |
0.63 |
0.89 |
-0.65 |
-0.93 |
0.00 |
0.45 |
262 |
| A |
6 |
6 |
3 |
0.50 |
0.84 |
0.93 |
1.77 |
0.93 |
0.97 |
0.27 |
0.23 |
0.00 |
0.98 |
41 |
| C |
1 |
3 |
0 |
0.00 |
0.50 |
0.67 |
1.17 |
0.33 |
0.50 |
-0.26 |
-0.46 |
0.04 |
0.06 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
-0.04 |
-0.04 |
0.00 |
0.00 |
155 |
| M |
2 |
1 |
1 |
0.67 |
0.43 |
0.60 |
1.03 |
0.50 |
0.60 |
-0.23 |
-0.22 |
0.00 |
0.03 |
277 |
| |
|
| Base Pair (1724:1736)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
24 |
20 |
13 |
0.59 |
0.48 |
0.68 |
1.16 |
0.68 |
0.84 |
-0.74 |
-0.83 |
0.01 |
0.21 |
836 |
| 3 |
22 |
18 |
13 |
0.65 |
0.47 |
0.68 |
1.15 |
0.68 |
0.84 |
-0.83 |
-0.95 |
0.02 |
0.33 |
458 |
| B |
19 |
15 |
10 |
0.59 |
0.35 |
0.59 |
0.94 |
0.65 |
0.83 |
-0.60 |
-0.72 |
0.04 |
0.57 |
262 |
| A |
3 |
3 |
3 |
1.00 |
0.80 |
0.91 |
1.71 |
0.91 |
0.91 |
-0.78 |
-0.66 |
0.02 |
0.56 |
41 |
| C |
2 |
2 |
0 |
0.00 |
0.67 |
0.78 |
1.44 |
0.78 |
0.78 |
-0.42 |
-0.38 |
0.00 |
0.09 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
155 |
| M |
0 |
0 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
0.50 |
1.00 |
-0.06 |
-0.07 |
0.00 |
0.01 |
277 |
| |
| Base Pair (1725:1735)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
21 |
22 |
17 |
0.79 |
0.84 |
0.93 |
1.77 |
0.93 |
0.96 |
-0.73 |
-0.77 |
0.00 |
0.23 |
836 |
| 3 |
19 |
20 |
17 |
0.87 |
0.85 |
0.94 |
1.79 |
0.94 |
0.97 |
-0.75 |
-0.80 |
0.00 |
0.35 |
458 |
| B |
18 |
19 |
16 |
0.86 |
0.85 |
0.93 |
1.78 |
0.93 |
0.97 |
-0.34 |
-0.41 |
0.00 |
0.64 |
262 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
-0.46 |
-0.62 |
0.05 |
0.32 |
41 |
| C |
2 |
2 |
0 |
0.00 |
0.75 |
0.85 |
1.60 |
0.85 |
0.85 |
-0.48 |
-0.50 |
0.01 |
0.13 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
155 |
| M |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.50 |
1.00 |
-0.06 |
-0.07 |
0.00 |
0.01 |
277 |
| |
| Base Pair (1726:1734)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
29 |
22 |
0.79 |
0.87 |
0.94 |
1.81 |
0.94 |
0.98 |
-0.80 |
-0.81 |
0.00 |
0.25 |
836 |
| 3 |
24 |
25 |
22 |
0.90 |
0.90 |
0.96 |
1.86 |
0.96 |
1.00 |
-0.76 |
-0.75 |
0.00 |
0.36 |
458 |
| B |
24 |
25 |
22 |
0.90 |
0.90 |
0.96 |
1.86 |
0.96 |
1.00 |
-0.30 |
-0.28 |
0.00 |
0.66 |
262 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
-0.30 |
-0.30 |
0.00 |
0.27 |
41 |
| C |
3 |
4 |
0 |
0.00 |
0.50 |
0.79 |
1.29 |
0.79 |
0.79 |
-0.73 |
-0.66 |
0.00 |
0.27 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
155 |
| M |
0 |
0 |
0 |
0.00 |
0.50 |
0.67 |
1.17 |
0.67 |
1.00 |
-0.07 |
-0.09 |
0.00 |
0.01 |
277 |
| |
| Base Pair (1727:1733)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
24 |
18 |
0.71 |
0.57 |
0.68 |
1.25 |
0.68 |
0.89 |
-0.89 |
-0.86 |
0.01 |
0.25 |
835 |
| 3 |
24 |
22 |
17 |
0.74 |
0.59 |
0.70 |
1.28 |
0.70 |
0.92 |
-0.99 |
-0.90 |
0.00 |
0.36 |
457 |
| B |
24 |
22 |
17 |
0.74 |
0.59 |
0.70 |
1.28 |
0.70 |
0.92 |
-0.53 |
-0.34 |
0.01 |
0.70 |
261 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
41 |
| C |
3 |
2 |
1 |
0.40 |
0.30 |
0.50 |
0.80 |
0.50 |
0.64 |
-0.71 |
-0.74 |
0.03 |
0.27 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
155 |
| M |
0 |
0 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
-0.08 |
-0.08 |
0.00 |
0.01 |
277 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)