23S rRNA Model Base Pair Collective Scoring Data for Helical Element 1835
| Base Pair (1835:1905)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
1 |
3 |
1 |
0.50 |
0.17 |
0.00 |
0.17 |
0.99 |
1.00 |
1.86 |
1.82 |
0.00 |
0.81 |
851 |
| 3 |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.98 |
1.98 |
0.00 |
0.70 |
439 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
2.00 |
0.00 |
0.74 |
243 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
2.00 |
1.94 |
0.00 |
0.59 |
155 |
| M |
1 |
2 |
1 |
0.67 |
0.20 |
0.00 |
0.20 |
0.99 |
1.00 |
1.70 |
1.60 |
0.00 |
0.96 |
311 |
| |
| Base Pair (1836:1904)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
3 |
4 |
3 |
0.86 |
0.96 |
1.00 |
1.96 |
1.00 |
1.00 |
1.68 |
1.66 |
0.00 |
0.80 |
852 |
| 3 |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.69 |
1.70 |
0.00 |
0.70 |
440 |
| B |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.94 |
1.93 |
0.00 |
0.75 |
244 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.00 |
1.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.93 |
2.00 |
0.00 |
0.59 |
155 |
| M |
1 |
2 |
1 |
0.67 |
0.67 |
1.00 |
1.66 |
1.00 |
1.00 |
1.68 |
1.63 |
0.00 |
0.96 |
311 |
| |
| Base Pair (1837:1903)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
10 |
11 |
8 |
0.76 |
0.77 |
0.99 |
1.75 |
0.99 |
0.99 |
1.59 |
1.57 |
0.00 |
0.81 |
852 |
| 3 |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.78 |
1.77 |
0.00 |
0.70 |
440 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.95 |
0.00 |
0.75 |
244 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.81 |
1.81 |
0.00 |
0.98 |
101 |
| E |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.52 |
1.52 |
0.00 |
0.59 |
155 |
| M |
8 |
9 |
6 |
0.71 |
0.62 |
0.96 |
1.58 |
0.96 |
0.98 |
1.32 |
1.29 |
0.00 |
0.96 |
311 |
| |
|
| Base Pair (1840:1902)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
12 |
12 |
8 |
0.67 |
0.90 |
0.99 |
1.88 |
0.99 |
0.99 |
1.28 |
1.25 |
0.00 |
0.80 |
852 |
| 3 |
2 |
4 |
2 |
0.67 |
0.91 |
0.99 |
1.90 |
0.99 |
1.00 |
1.55 |
1.54 |
0.00 |
0.70 |
440 |
| B |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.73 |
1.74 |
0.00 |
0.75 |
244 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.00 |
1.00 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.92 |
1.74 |
0.02 |
0.96 |
101 |
| E |
0 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
1.00 |
1.93 |
1.86 |
0.00 |
0.59 |
155 |
| M |
9 |
7 |
5 |
0.62 |
0.89 |
0.98 |
1.86 |
0.98 |
0.98 |
0.84 |
0.85 |
0.00 |
0.96 |
311 |
| |
| Base Pair (1841:1901)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.85 |
1.88 |
0.00 |
0.81 |
852 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.70 |
440 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.75 |
244 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.59 |
155 |
| M |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.64 |
1.73 |
0.00 |
0.96 |
311 |
| |
|
| Base Pair (1842:1898)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
2 |
8 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.99 |
1.86 |
1.76 |
0.00 |
0.81 |
852 |
| 3 |
1 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
1.98 |
1.93 |
0.00 |
0.70 |
440 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.96 |
2.00 |
0.00 |
0.75 |
244 |
| A |
0 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.10 |
1.00 |
2.00 |
1.54 |
0.00 |
1.00 |
41 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
2.00 |
1.92 |
0.00 |
0.98 |
101 |
| E |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.94 |
2.00 |
0.00 |
0.59 |
155 |
| M |
1 |
5 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.99 |
1.70 |
1.54 |
0.00 |
0.96 |
311 |
| |
| Base Pair (1843:1897)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
11 |
10 |
7 |
0.67 |
0.97 |
0.99 |
1.96 |
0.99 |
1.00 |
0.73 |
0.73 |
0.00 |
0.80 |
851 |
| 3 |
2 |
1 |
1 |
0.67 |
0.95 |
1.00 |
1.95 |
1.00 |
1.00 |
1.73 |
1.72 |
0.00 |
0.70 |
440 |
| B |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
2.00 |
0.00 |
0.75 |
244 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.00 |
1.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.93 |
0.00 |
0.59 |
155 |
| M |
9 |
9 |
6 |
0.67 |
0.86 |
0.97 |
1.83 |
0.97 |
0.99 |
0.78 |
0.86 |
0.00 |
0.95 |
310 |
| |
| Base Pair (1844:1896)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
40 |
40 |
33 |
0.82 |
0.61 |
0.80 |
1.42 |
0.80 |
0.99 |
0.44 |
0.55 |
0.00 |
0.78 |
852 |
| 3 |
20 |
17 |
15 |
0.81 |
0.47 |
0.67 |
1.14 |
0.67 |
0.99 |
0.93 |
0.82 |
0.00 |
0.70 |
440 |
| B |
12 |
12 |
10 |
0.83 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
1.09 |
1.06 |
0.00 |
0.75 |
244 |
| A |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.40 |
0.40 |
0.00 |
1.00 |
41 |
| C |
5 |
5 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.49 |
1.49 |
0.00 |
0.98 |
101 |
| E |
4 |
1 |
1 |
0.40 |
0.39 |
0.95 |
1.33 |
0.08 |
0.99 |
1.53 |
1.66 |
0.00 |
0.59 |
155 |
| M |
15 |
18 |
12 |
0.73 |
0.80 |
0.94 |
1.73 |
0.94 |
0.97 |
0.25 |
0.24 |
0.00 |
0.89 |
311 |
| |
| Base Pair (1845:1895)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
25 |
22 |
22 |
0.94 |
0.99 |
0.99 |
1.98 |
0.99 |
1.00 |
-0.44 |
-0.44 |
0.00 |
0.58 |
860 |
| 3 |
10 |
8 |
8 |
0.89 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
0.69 |
0.69 |
0.00 |
0.71 |
448 |
| B |
6 |
4 |
4 |
0.80 |
0.95 |
0.99 |
1.94 |
0.99 |
0.99 |
1.12 |
1.22 |
0.00 |
0.77 |
252 |
| A |
0 |
0 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.83 |
1.83 |
0.00 |
1.00 |
41 |
| C |
5 |
5 |
5 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.60 |
1.60 |
0.00 |
0.98 |
101 |
| E |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.45 |
1.45 |
0.00 |
0.59 |
155 |
| M |
10 |
9 |
9 |
0.95 |
0.96 |
0.98 |
1.95 |
0.98 |
1.00 |
-0.62 |
-0.62 |
0.00 |
0.17 |
311 |
| |
| Base Pair (1846:1894)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
13 |
11 |
7 |
0.58 |
0.34 |
0.95 |
1.29 |
0.95 |
0.96 |
0.20 |
0.31 |
0.00 |
0.58 |
864 |
| 3 |
2 |
3 |
1 |
0.40 |
0.28 |
0.97 |
1.25 |
0.97 |
0.98 |
1.75 |
1.87 |
0.00 |
0.72 |
452 |
| B |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.96 |
0.96 |
1.71 |
1.96 |
0.00 |
0.79 |
257 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.92 |
1.92 |
0.00 |
0.98 |
101 |
| E |
1 |
3 |
1 |
0.50 |
0.71 |
0.99 |
1.70 |
0.99 |
1.00 |
1.79 |
1.70 |
0.00 |
0.59 |
155 |
| M |
10 |
7 |
5 |
0.59 |
0.36 |
0.68 |
1.04 |
0.68 |
0.74 |
-0.59 |
-0.53 |
0.00 |
0.16 |
311 |
| |
|
| Base Pair (1849:1893)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
14 |
17 |
14 |
0.90 |
0.70 |
0.89 |
1.58 |
0.74 |
0.98 |
-0.41 |
-0.41 |
0.00 |
0.57 |
864 |
| 3 |
4 |
7 |
5 |
0.91 |
0.71 |
0.87 |
1.58 |
0.66 |
0.98 |
0.71 |
0.70 |
0.00 |
0.71 |
452 |
| B |
1 |
0 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.72 |
1.68 |
0.00 |
0.78 |
256 |
| A |
2 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.51 |
0.51 |
0.00 |
1.00 |
41 |
| C |
2 |
2 |
1 |
0.50 |
0.75 |
0.99 |
1.74 |
0.99 |
0.99 |
1.63 |
1.76 |
0.01 |
0.97 |
101 |
| E |
1 |
4 |
1 |
0.40 |
0.21 |
0.93 |
1.14 |
0.03 |
0.94 |
1.81 |
1.46 |
0.00 |
0.59 |
155 |
| M |
8 |
8 |
8 |
1.00 |
0.75 |
0.88 |
1.62 |
0.88 |
0.94 |
-0.54 |
-0.56 |
0.00 |
0.15 |
311 |
| |
| Base Pair (1850:1892)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
15 |
14 |
11 |
0.76 |
0.88 |
0.99 |
1.86 |
0.99 |
0.99 |
0.16 |
0.15 |
0.00 |
0.57 |
865 |
| 3 |
6 |
6 |
5 |
0.83 |
0.93 |
1.00 |
1.92 |
1.00 |
1.00 |
1.62 |
1.56 |
0.00 |
0.72 |
453 |
| B |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.72 |
1.63 |
0.01 |
0.78 |
257 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.10 |
1.10 |
0.00 |
1.00 |
41 |
| C |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
0.99 |
1.92 |
1.82 |
0.01 |
0.97 |
101 |
| E |
1 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.94 |
1.94 |
0.00 |
0.59 |
155 |
| M |
8 |
8 |
6 |
0.75 |
0.89 |
0.96 |
1.85 |
0.96 |
0.98 |
-0.54 |
-0.55 |
0.00 |
0.15 |
311 |
| |
| Base Pair (1851:1891)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
7 |
10 |
5 |
0.59 |
0.20 |
0.00 |
0.20 |
0.02 |
0.96 |
0.34 |
0.28 |
0.00 |
0.58 |
867 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.72 |
455 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.96 |
2.00 |
0.00 |
0.79 |
259 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.59 |
155 |
| M |
7 |
10 |
5 |
0.59 |
0.20 |
0.00 |
0.20 |
0.30 |
0.55 |
-0.56 |
-0.54 |
0.00 |
0.15 |
311 |
| |
|
| Base Pair (1855:1887) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
31 |
44 |
11 |
0.29 |
0.27 |
0.48 |
0.75 |
0.45 |
0.74 |
-0.79 |
-0.43 |
0.19 |
0.39 |
867 |
| 3 |
17 |
24 |
2 |
0.10 |
0.40 |
0.64 |
1.04 |
0.30 |
0.70 |
-0.73 |
0.83 |
0.31 |
0.41 |
455 |
| B |
17 |
14 |
2 |
0.13 |
0.40 |
0.64 |
1.04 |
0.30 |
0.70 |
0.45 |
0.98 |
0.00 |
0.79 |
259 |
| A |
0 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.24 |
1.00 |
0.00 |
41 |
| C |
7 |
9 |
4 |
0.50 |
0.56 |
0.86 |
1.42 |
0.86 |
0.96 |
1.24 |
0.97 |
0.00 |
0.98 |
101 |
| E |
0 |
8 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.74 |
0.59 |
0.00 |
155 |
| M |
7 |
11 |
5 |
0.56 |
0.33 |
0.43 |
0.75 |
0.34 |
0.47 |
-0.57 |
-0.62 |
0.00 |
0.15 |
311 |
| |
| Base Pair (1856:1886) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
22 |
21 |
19 |
0.88 |
0.62 |
0.77 |
1.39 |
0.77 |
0.77 |
-0.82 |
-0.65 |
0.00 |
0.39 |
867 |
| 3 |
13 |
10 |
10 |
0.87 |
0.42 |
0.67 |
1.09 |
0.67 |
0.67 |
-0.75 |
-0.35 |
0.00 |
0.41 |
455 |
| B |
13 |
10 |
10 |
0.87 |
0.42 |
0.67 |
1.09 |
0.67 |
0.67 |
0.40 |
1.12 |
0.00 |
0.79 |
259 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.81 |
1.81 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
155 |
| M |
8 |
10 |
8 |
0.89 |
0.64 |
0.83 |
1.46 |
0.83 |
0.85 |
-0.55 |
-0.57 |
0.01 |
0.15 |
311 |
| |
|
| Base Pair (1858:1884) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
12 |
24 |
7 |
0.39 |
0.75 |
0.86 |
1.61 |
0.06 |
0.06 |
-0.63 |
-0.62 |
0.00 |
0.39 |
868 |
| 3 |
4 |
5 |
3 |
0.67 |
0.95 |
0.98 |
1.93 |
0.01 |
0.01 |
-0.42 |
-0.39 |
0.00 |
0.41 |
456 |
| B |
4 |
5 |
3 |
0.67 |
0.95 |
0.98 |
1.93 |
0.01 |
0.01 |
0.95 |
1.05 |
0.00 |
0.79 |
260 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
41 |
| C |
0 |
13 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.03 |
0.03 |
2.00 |
1.06 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
155 |
| M |
8 |
6 |
4 |
0.57 |
0.28 |
0.51 |
0.79 |
0.40 |
0.45 |
-0.59 |
-0.53 |
0.00 |
0.15 |
311 |
| |
| Base Pair (1859:1883) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
30 |
18 |
4 |
0.17 |
0.79 |
0.88 |
1.67 |
0.29 |
0.34 |
-0.63 |
-0.84 |
0.18 |
0.39 |
869 |
| 3 |
21 |
7 |
3 |
0.21 |
0.89 |
0.96 |
1.85 |
0.03 |
0.05 |
0.58 |
-0.51 |
0.30 |
0.41 |
457 |
| B |
8 |
7 |
3 |
0.40 |
0.89 |
0.96 |
1.85 |
0.03 |
0.05 |
0.82 |
0.84 |
0.00 |
0.80 |
261 |
| A |
4 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.63 |
0.00 |
1.00 |
0.00 |
41 |
| C |
2 |
5 |
0 |
0.00 |
0.42 |
0.93 |
1.35 |
0.93 |
0.99 |
1.68 |
1.43 |
0.00 |
0.98 |
101 |
| E |
9 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.67 |
0.00 |
0.57 |
0.00 |
155 |
| M |
7 |
6 |
1 |
0.15 |
0.35 |
0.54 |
0.89 |
0.35 |
0.56 |
-0.52 |
-0.52 |
0.00 |
0.14 |
311 |
| |
| Base Pair (1860:1882)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
34 |
39 |
13 |
0.36 |
0.14 |
0.00 |
0.14 |
0.41 |
0.69 |
-0.57 |
-0.81 |
0.00 |
0.57 |
869 |
| 3 |
18 |
23 |
4 |
0.20 |
0.17 |
0.00 |
0.17 |
0.32 |
0.59 |
0.74 |
0.06 |
0.00 |
0.72 |
457 |
| B |
10 |
15 |
2 |
0.16 |
0.14 |
0.00 |
0.14 |
0.40 |
0.84 |
0.93 |
0.55 |
0.00 |
0.80 |
261 |
| A |
3 |
3 |
0 |
0.00 |
0.57 |
0.85 |
1.43 |
0.68 |
0.78 |
0.59 |
0.97 |
0.00 |
1.00 |
41 |
| C |
4 |
7 |
2 |
0.36 |
0.20 |
0.00 |
0.20 |
0.68 |
0.99 |
1.54 |
0.88 |
0.00 |
0.98 |
101 |
| E |
5 |
5 |
2 |
0.40 |
0.14 |
0.00 |
0.14 |
0.09 |
0.10 |
1.19 |
1.23 |
0.00 |
0.57 |
155 |
| M |
12 |
9 |
7 |
0.67 |
0.58 |
0.70 |
1.28 |
0.70 |
0.93 |
-0.58 |
-0.52 |
0.01 |
0.14 |
311 |
| |
| Base Pair (1861:1881)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
43 |
44 |
35 |
0.81 |
0.77 |
0.85 |
1.62 |
0.85 |
0.99 |
-0.77 |
-0.83 |
0.00 |
0.57 |
869 |
| 3 |
28 |
28 |
25 |
0.89 |
0.96 |
0.98 |
1.94 |
0.98 |
1.00 |
0.04 |
0.04 |
0.00 |
0.72 |
457 |
| B |
24 |
24 |
22 |
0.92 |
0.95 |
0.97 |
1.93 |
0.97 |
1.00 |
0.16 |
0.15 |
0.00 |
0.80 |
261 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.72 |
1.72 |
0.00 |
1.00 |
41 |
| C |
7 |
8 |
2 |
0.27 |
0.10 |
0.00 |
0.10 |
0.25 |
0.97 |
1.40 |
1.03 |
0.00 |
0.98 |
101 |
| E |
3 |
3 |
2 |
0.67 |
0.50 |
0.98 |
1.48 |
0.98 |
0.99 |
1.56 |
1.57 |
0.00 |
0.57 |
155 |
| M |
8 |
8 |
8 |
1.00 |
0.88 |
0.93 |
1.81 |
0.93 |
1.00 |
-0.59 |
-0.56 |
0.01 |
0.14 |
311 |
| |
| Base Pair (1862:1880)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
37 |
32 |
20 |
0.58 |
0.30 |
0.61 |
0.91 |
0.52 |
0.98 |
-0.37 |
-0.66 |
0.00 |
0.57 |
869 |
| 3 |
25 |
24 |
15 |
0.61 |
0.32 |
0.58 |
0.89 |
0.59 |
0.98 |
0.71 |
0.17 |
0.00 |
0.72 |
457 |
| B |
20 |
18 |
10 |
0.53 |
0.65 |
0.88 |
1.53 |
0.31 |
0.98 |
0.69 |
0.78 |
0.00 |
0.80 |
261 |
| A |
3 |
3 |
3 |
1.00 |
0.73 |
0.93 |
1.65 |
0.93 |
0.98 |
0.87 |
1.29 |
0.00 |
1.00 |
41 |
| C |
3 |
2 |
1 |
0.40 |
0.06 |
0.00 |
0.06 |
0.11 |
0.96 |
1.72 |
1.25 |
0.01 |
0.97 |
101 |
| E |
2 |
3 |
2 |
0.80 |
0.40 |
0.98 |
1.38 |
0.98 |
0.98 |
1.62 |
1.55 |
0.00 |
0.57 |
155 |
| M |
9 |
6 |
4 |
0.53 |
0.56 |
0.77 |
1.33 |
0.77 |
0.98 |
-0.58 |
-0.53 |
0.00 |
0.15 |
311 |
| |
| Base Pair (1863:1879)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
16 |
14 |
8 |
0.53 |
0.89 |
0.95 |
1.84 |
0.95 |
0.99 |
-0.66 |
-0.64 |
0.00 |
0.53 |
869 |
| 3 |
8 |
6 |
3 |
0.43 |
0.94 |
0.97 |
1.92 |
0.97 |
0.98 |
-0.13 |
-0.10 |
0.00 |
0.64 |
457 |
| B |
2 |
2 |
2 |
1.00 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.26 |
0.23 |
0.00 |
0.65 |
261 |
| A |
2 |
1 |
0 |
0.00 |
0.73 |
0.93 |
1.65 |
0.93 |
1.00 |
0.89 |
0.93 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.78 |
1.78 |
0.00 |
0.98 |
101 |
| E |
4 |
3 |
1 |
0.29 |
0.36 |
0.95 |
1.32 |
0.95 |
0.97 |
1.34 |
1.49 |
0.01 |
0.57 |
155 |
| M |
7 |
7 |
4 |
0.57 |
0.48 |
0.64 |
1.12 |
0.68 |
1.00 |
-0.59 |
-0.60 |
0.00 |
0.15 |
311 |
| |
| Base Pair (1864:1878)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
12 |
11 |
7 |
0.61 |
0.73 |
0.89 |
1.62 |
0.33 |
0.93 |
-0.53 |
-0.54 |
0.00 |
0.52 |
869 |
| 3 |
6 |
2 |
1 |
0.25 |
0.77 |
0.89 |
1.66 |
0.39 |
0.91 |
-0.04 |
0.05 |
0.01 |
0.64 |
457 |
| B |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.99 |
0.95 |
0.82 |
0.00 |
0.65 |
261 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.19 |
1.19 |
0.00 |
1.00 |
41 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.03 |
1.00 |
2.00 |
1.81 |
0.00 |
0.98 |
101 |
| E |
5 |
0 |
0 |
0.00 |
0.03 |
0.00 |
0.03 |
0.76 |
0.76 |
0.67 |
1.72 |
0.01 |
0.56 |
155 |
| M |
6 |
8 |
6 |
0.86 |
0.54 |
0.73 |
1.27 |
0.47 |
1.00 |
-0.52 |
-0.57 |
0.00 |
0.14 |
311 |
| |
|
| Base Pair (1867:1874)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
20 |
23 |
17 |
0.79 |
0.83 |
0.95 |
1.78 |
0.95 |
0.98 |
-0.65 |
-0.68 |
0.00 |
0.35 |
869 |
| 3 |
5 |
7 |
5 |
0.83 |
0.73 |
0.97 |
1.70 |
0.97 |
1.00 |
-0.12 |
-0.20 |
0.00 |
0.41 |
457 |
| B |
5 |
7 |
5 |
0.83 |
0.73 |
0.97 |
1.70 |
0.97 |
1.00 |
1.41 |
1.24 |
0.00 |
0.79 |
261 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
41 |
| C |
14 |
15 |
12 |
0.83 |
0.86 |
0.93 |
1.79 |
0.93 |
0.95 |
0.16 |
0.11 |
0.01 |
0.96 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
155 |
| M |
1 |
1 |
0 |
0.00 |
0.44 |
0.64 |
1.09 |
0.64 |
0.79 |
-0.25 |
-0.25 |
0.00 |
0.04 |
311 |
| |
| Base Pair (1868:1873)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
32 |
27 |
18 |
0.61 |
0.48 |
0.77 |
1.24 |
0.77 |
0.98 |
-0.72 |
-0.61 |
0.01 |
0.35 |
869 |
| 3 |
12 |
6 |
4 |
0.44 |
0.19 |
0.00 |
0.19 |
0.75 |
0.99 |
-0.49 |
-0.14 |
0.01 |
0.41 |
457 |
| B |
12 |
6 |
4 |
0.44 |
0.19 |
0.00 |
0.19 |
0.75 |
0.99 |
0.73 |
1.40 |
0.00 |
0.79 |
261 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
41 |
| C |
20 |
20 |
14 |
0.70 |
0.71 |
0.83 |
1.54 |
0.83 |
0.97 |
0.29 |
0.26 |
0.00 |
0.97 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
-0.12 |
0.01 |
0.00 |
155 |
| M |
0 |
1 |
0 |
0.00 |
0.29 |
0.64 |
0.93 |
0.64 |
1.00 |
-0.21 |
-0.26 |
0.00 |
0.04 |
311 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)