23S rRNA Model Base Pair Collective Scoring Data for Helical Element 1935
| Base Pair (1935:1962) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
21 |
23 |
8 |
0.36 |
0.77 |
0.89 |
1.65 |
0.89 |
0.95 |
0.55 |
0.52 |
0.00 |
0.81 |
847 |
| 3 |
4 |
3 |
2 |
0.57 |
0.93 |
0.97 |
1.89 |
0.97 |
1.00 |
0.97 |
0.88 |
0.00 |
0.69 |
436 |
| B |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.96 |
1.91 |
0.00 |
0.74 |
240 |
| A |
1 |
1 |
0 |
0.00 |
0.55 |
0.78 |
1.33 |
0.73 |
1.00 |
1.00 |
0.52 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
0.97 |
1.86 |
1.92 |
0.00 |
0.98 |
101 |
| E |
2 |
1 |
1 |
0.67 |
0.50 |
0.99 |
1.49 |
0.99 |
0.99 |
1.89 |
1.94 |
0.00 |
0.59 |
155 |
| M |
16 |
19 |
6 |
0.34 |
0.54 |
0.74 |
1.28 |
0.74 |
0.86 |
0.91 |
0.73 |
0.00 |
0.99 |
310 |
| |
|
| Base Pair (1945:1961)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
5 |
7 |
2 |
0.33 |
0.04 |
0.00 |
0.04 |
0.98 |
0.98 |
1.92 |
1.83 |
0.00 |
0.81 |
848 |
| 3 |
2 |
1 |
1 |
0.67 |
0.33 |
0.99 |
1.33 |
0.99 |
0.99 |
1.93 |
1.95 |
0.00 |
0.69 |
436 |
| B |
2 |
1 |
1 |
0.67 |
0.33 |
0.99 |
1.32 |
0.99 |
0.99 |
1.84 |
1.96 |
0.00 |
0.74 |
240 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.93 |
0.00 |
0.59 |
155 |
| M |
3 |
6 |
1 |
0.22 |
0.05 |
0.00 |
0.05 |
0.94 |
0.94 |
1.89 |
1.68 |
0.00 |
1.00 |
311 |
| |
| Base Pair (1946:1960)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
24 |
25 |
17 |
0.69 |
0.71 |
0.96 |
1.67 |
0.94 |
0.98 |
1.30 |
1.24 |
0.00 |
0.81 |
847 |
| 3 |
5 |
6 |
5 |
0.91 |
0.90 |
0.99 |
1.89 |
0.99 |
0.99 |
1.56 |
1.49 |
0.00 |
0.69 |
435 |
| B |
3 |
4 |
3 |
0.86 |
0.50 |
0.98 |
1.48 |
0.97 |
0.98 |
1.85 |
1.75 |
0.00 |
0.73 |
239 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.24 |
1.24 |
0.00 |
1.00 |
41 |
| C |
7 |
8 |
7 |
0.93 |
0.94 |
0.99 |
1.93 |
0.99 |
1.00 |
1.26 |
1.23 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.59 |
155 |
| M |
12 |
11 |
5 |
0.43 |
0.58 |
0.91 |
1.49 |
0.86 |
0.96 |
1.11 |
0.99 |
0.00 |
0.99 |
311 |
| |
| Base Pair (1947:1959)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
12 |
5 |
4 |
0.47 |
0.18 |
0.00 |
0.18 |
0.88 |
1.00 |
1.35 |
1.72 |
0.00 |
0.81 |
848 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.95 |
0.00 |
0.69 |
436 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.95 |
0.00 |
0.73 |
240 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.92 |
1.92 |
0.00 |
0.98 |
101 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.93 |
0.00 |
0.59 |
155 |
| M |
12 |
5 |
4 |
0.47 |
0.19 |
0.00 |
0.19 |
0.66 |
0.99 |
0.95 |
1.50 |
0.00 |
1.00 |
311 |
| |
| Base Pair (1948:1958)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
32 |
36 |
27 |
0.79 |
0.93 |
0.96 |
1.89 |
0.96 |
0.98 |
0.14 |
0.14 |
0.00 |
0.81 |
848 |
| 3 |
5 |
6 |
5 |
0.91 |
0.99 |
0.99 |
1.98 |
0.99 |
1.00 |
0.96 |
0.96 |
0.00 |
0.69 |
436 |
| B |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.79 |
1.79 |
0.00 |
0.74 |
240 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
10 |
10 |
10 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.02 |
1.02 |
0.00 |
0.98 |
101 |
| E |
2 |
3 |
2 |
0.80 |
0.89 |
0.99 |
1.88 |
0.99 |
0.99 |
1.63 |
1.59 |
0.00 |
0.59 |
155 |
| M |
17 |
20 |
12 |
0.65 |
0.83 |
0.90 |
1.74 |
0.90 |
0.94 |
0.43 |
0.42 |
0.00 |
1.00 |
311 |
| |
| Base Pair (1949:1957)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
38 |
52 |
32 |
0.71 |
0.52 |
0.72 |
1.25 |
0.78 |
1.00 |
0.27 |
0.26 |
0.00 |
0.81 |
848 |
| 3 |
5 |
7 |
5 |
0.83 |
0.92 |
0.97 |
1.88 |
0.66 |
0.99 |
0.83 |
0.93 |
0.00 |
0.69 |
436 |
| B |
2 |
2 |
2 |
1.00 |
0.67 |
1.00 |
1.66 |
1.00 |
1.00 |
1.89 |
1.90 |
0.00 |
0.74 |
240 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.16 |
1.16 |
0.00 |
1.00 |
41 |
| C |
7 |
7 |
7 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.06 |
1.06 |
0.00 |
0.98 |
101 |
| E |
2 |
4 |
2 |
0.67 |
0.75 |
0.99 |
1.74 |
0.04 |
0.99 |
1.73 |
1.63 |
0.00 |
0.59 |
155 |
| M |
26 |
38 |
20 |
0.62 |
0.79 |
0.86 |
1.65 |
0.86 |
1.00 |
0.39 |
0.37 |
0.00 |
1.00 |
311 |
| |
| Base Pair (1950:1956) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
31 |
31 |
14 |
0.45 |
0.68 |
0.82 |
1.51 |
0.14 |
0.68 |
0.24 |
0.46 |
0.00 |
0.81 |
848 |
| 3 |
8 |
9 |
4 |
0.47 |
0.84 |
0.93 |
1.77 |
0.04 |
0.65 |
0.65 |
0.88 |
0.00 |
0.69 |
436 |
| B |
2 |
3 |
2 |
0.80 |
0.79 |
0.99 |
1.77 |
0.05 |
0.99 |
1.66 |
1.63 |
0.00 |
0.74 |
240 |
| A |
2 |
2 |
0 |
0.00 |
0.77 |
0.90 |
1.67 |
0.10 |
0.85 |
0.63 |
0.62 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
0.00 |
0.98 |
1.86 |
1.86 |
0.00 |
0.98 |
101 |
| E |
4 |
4 |
2 |
0.50 |
0.59 |
0.95 |
1.54 |
0.01 |
0.07 |
1.37 |
1.43 |
0.00 |
0.59 |
155 |
| M |
22 |
21 |
9 |
0.42 |
0.21 |
0.45 |
0.67 |
0.32 |
0.61 |
0.37 |
0.46 |
0.00 |
1.00 |
311 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)