23S rRNA Model Base Pair Collective Scoring Data for Helical Element 2043
| Base Pair (2043:2625)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
61 |
26 |
13 |
0.30 |
0.49 |
0.83 |
1.32 |
0.79 |
0.81 |
0.17 |
-0.35 |
0.20 |
0.49 |
729 |
| 3 |
14 |
12 |
4 |
0.31 |
0.51 |
0.83 |
1.34 |
0.75 |
0.77 |
0.51 |
0.57 |
0.02 |
0.63 |
412 |
| B |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.67 |
1.60 |
0.01 |
0.70 |
235 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.83 |
1.83 |
0.00 |
1.00 |
41 |
| C |
7 |
2 |
2 |
0.44 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.40 |
1.58 |
0.00 |
0.53 |
55 |
| E |
11 |
9 |
1 |
0.10 |
0.08 |
0.00 |
0.08 |
0.22 |
0.26 |
0.41 |
0.39 |
0.03 |
0.47 |
136 |
| M |
40 |
12 |
7 |
0.27 |
0.78 |
0.88 |
1.66 |
0.88 |
0.90 |
0.27 |
-0.69 |
0.63 |
0.19 |
262 |
| |
| Base Pair (2044:2624)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
66 |
28 |
21 |
0.45 |
0.44 |
0.75 |
1.20 |
0.75 |
0.76 |
0.17 |
-0.19 |
0.18 |
0.50 |
729 |
| 3 |
15 |
13 |
11 |
0.79 |
0.35 |
0.71 |
1.06 |
0.71 |
0.72 |
0.38 |
1.10 |
0.01 |
0.65 |
412 |
| B |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.26 |
1.25 |
0.00 |
0.72 |
236 |
| A |
5 |
5 |
5 |
1.00 |
0.94 |
0.98 |
1.92 |
0.98 |
0.98 |
0.74 |
0.69 |
0.00 |
1.00 |
41 |
| C |
10 |
2 |
1 |
0.17 |
0.85 |
0.96 |
1.81 |
0.96 |
0.96 |
1.15 |
1.23 |
0.00 |
0.53 |
55 |
| E |
6 |
4 |
2 |
0.40 |
0.43 |
0.91 |
1.34 |
0.11 |
0.14 |
1.18 |
1.27 |
0.01 |
0.51 |
135 |
| M |
41 |
13 |
9 |
0.33 |
0.76 |
0.85 |
1.61 |
0.85 |
0.90 |
0.41 |
-0.69 |
0.64 |
0.19 |
262 |
| |
| Base Pair (2045:2623)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
68 |
23 |
17 |
0.37 |
0.86 |
0.93 |
1.79 |
0.93 |
0.99 |
0.23 |
-0.47 |
0.19 |
0.50 |
729 |
| 3 |
13 |
11 |
9 |
0.75 |
0.92 |
0.97 |
1.89 |
0.97 |
0.99 |
0.71 |
0.74 |
0.00 |
0.65 |
412 |
| B |
6 |
4 |
2 |
0.40 |
0.52 |
0.96 |
1.48 |
0.96 |
1.00 |
1.59 |
1.69 |
0.00 |
0.72 |
236 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.54 |
1.54 |
0.00 |
1.00 |
41 |
| C |
6 |
1 |
1 |
0.29 |
0.17 |
0.00 |
0.17 |
0.73 |
1.00 |
1.30 |
0.90 |
0.00 |
0.53 |
55 |
| E |
4 |
4 |
4 |
1.00 |
0.80 |
0.98 |
1.78 |
0.98 |
0.98 |
1.45 |
1.20 |
0.01 |
0.51 |
135 |
| M |
49 |
11 |
7 |
0.23 |
0.74 |
0.85 |
1.59 |
0.85 |
0.95 |
0.16 |
-0.68 |
0.64 |
0.19 |
262 |
| |
| Base Pair (2046:2622)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
70 |
29 |
10 |
0.20 |
0.50 |
0.66 |
1.16 |
0.66 |
0.98 |
0.09 |
-0.65 |
0.17 |
0.53 |
729 |
| 3 |
6 |
15 |
5 |
0.48 |
0.59 |
0.73 |
1.31 |
0.66 |
0.99 |
0.51 |
0.11 |
0.00 |
0.65 |
412 |
| B |
2 |
10 |
1 |
0.17 |
0.00 |
0.00 |
0.00 |
0.42 |
1.00 |
1.90 |
1.02 |
0.00 |
0.72 |
236 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
14 |
3 |
0 |
0.00 |
0.04 |
0.00 |
0.04 |
0.47 |
1.00 |
0.67 |
1.45 |
0.00 |
0.53 |
55 |
| E |
4 |
5 |
4 |
0.89 |
0.72 |
0.96 |
1.69 |
0.96 |
0.97 |
1.48 |
1.21 |
0.00 |
0.51 |
135 |
| M |
50 |
11 |
5 |
0.16 |
0.61 |
0.78 |
1.40 |
0.78 |
0.91 |
0.12 |
-0.74 |
0.54 |
0.28 |
262 |
| |
| Base Pair (2047:2621)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
70 |
23 |
18 |
0.39 |
0.86 |
0.98 |
1.84 |
0.98 |
0.99 |
0.70 |
0.17 |
0.17 |
0.53 |
728 |
| 3 |
8 |
8 |
5 |
0.62 |
0.72 |
0.98 |
1.71 |
0.98 |
0.99 |
1.56 |
1.66 |
0.00 |
0.65 |
411 |
| B |
5 |
5 |
3 |
0.60 |
0.85 |
0.99 |
1.84 |
0.99 |
0.99 |
1.69 |
1.69 |
0.00 |
0.72 |
235 |
| A |
0 |
0 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.83 |
1.83 |
0.00 |
1.00 |
41 |
| C |
8 |
2 |
2 |
0.40 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.39 |
1.70 |
0.00 |
0.53 |
55 |
| E |
3 |
3 |
2 |
0.67 |
0.60 |
0.96 |
1.56 |
0.96 |
1.00 |
1.36 |
1.59 |
0.00 |
0.51 |
135 |
| M |
54 |
13 |
11 |
0.33 |
0.88 |
0.94 |
1.82 |
0.94 |
0.95 |
0.15 |
-0.73 |
0.54 |
0.28 |
262 |
| |
| Base Pair (2048:2620)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
42 |
36 |
31 |
0.80 |
0.97 |
0.98 |
1.96 |
0.98 |
0.98 |
0.29 |
0.26 |
0.00 |
0.70 |
729 |
| 3 |
16 |
15 |
13 |
0.84 |
0.99 |
0.99 |
1.99 |
0.99 |
0.99 |
0.73 |
0.72 |
0.00 |
0.65 |
412 |
| B |
9 |
9 |
7 |
0.78 |
0.96 |
0.99 |
1.95 |
0.99 |
0.99 |
1.18 |
1.23 |
0.00 |
0.72 |
236 |
| A |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.08 |
0.08 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.53 |
55 |
| E |
3 |
2 |
2 |
0.80 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.46 |
1.85 |
0.00 |
0.51 |
135 |
| M |
26 |
21 |
18 |
0.77 |
0.95 |
0.97 |
1.91 |
0.97 |
0.97 |
0.29 |
0.23 |
0.00 |
0.84 |
262 |
| |
| Base Pair (2049:2619)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
32 |
25 |
20 |
0.70 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.45 |
0.55 |
0.00 |
0.70 |
729 |
| 3 |
17 |
13 |
10 |
0.67 |
0.93 |
0.98 |
1.92 |
0.98 |
0.98 |
0.94 |
0.92 |
0.00 |
0.65 |
412 |
| B |
9 |
6 |
3 |
0.40 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.79 |
0.80 |
0.00 |
0.72 |
236 |
| A |
6 |
6 |
7 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.52 |
0.52 |
0.00 |
1.00 |
41 |
| C |
2 |
1 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.76 |
1.70 |
0.00 |
0.53 |
55 |
| E |
2 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.96 |
0.96 |
1.89 |
1.85 |
0.00 |
0.51 |
135 |
| M |
13 |
11 |
10 |
0.83 |
0.96 |
0.99 |
1.96 |
0.99 |
1.00 |
1.12 |
1.17 |
0.00 |
0.84 |
262 |
| |
| Base Pair (2050:2618)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
51 |
34 |
19 |
0.45 |
0.43 |
0.66 |
1.09 |
0.66 |
0.75 |
0.65 |
0.60 |
0.00 |
0.70 |
729 |
| 3 |
13 |
12 |
3 |
0.24 |
0.11 |
0.00 |
0.11 |
0.53 |
0.64 |
1.10 |
0.79 |
0.00 |
0.65 |
412 |
| B |
10 |
7 |
3 |
0.35 |
0.21 |
0.78 |
1.00 |
0.78 |
0.96 |
0.97 |
1.40 |
0.01 |
0.72 |
236 |
| A |
2 |
2 |
0 |
0.00 |
0.48 |
0.73 |
1.21 |
0.73 |
0.83 |
0.51 |
0.89 |
0.00 |
1.00 |
41 |
| C |
10 |
1 |
1 |
0.18 |
0.11 |
0.00 |
0.11 |
0.85 |
1.00 |
1.15 |
1.87 |
0.00 |
0.53 |
55 |
| E |
1 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.01 |
1.94 |
1.79 |
0.00 |
0.51 |
135 |
| M |
28 |
21 |
15 |
0.61 |
0.71 |
0.84 |
1.55 |
0.84 |
0.87 |
0.34 |
0.49 |
0.00 |
0.84 |
262 |
| |
|
| Base Pair (2052:2617)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
18 |
15 |
8 |
0.48 |
0.54 |
0.76 |
1.29 |
0.76 |
1.00 |
0.88 |
1.04 |
0.00 |
0.69 |
726 |
| 3 |
4 |
8 |
2 |
0.33 |
0.03 |
0.00 |
0.03 |
0.60 |
1.00 |
1.06 |
0.98 |
0.00 |
0.65 |
412 |
| B |
3 |
4 |
1 |
0.29 |
0.94 |
0.97 |
1.91 |
0.97 |
1.00 |
1.00 |
1.00 |
0.00 |
0.72 |
236 |
| A |
1 |
4 |
1 |
0.40 |
0.47 |
0.78 |
1.25 |
0.41 |
1.00 |
1.29 |
0.61 |
0.00 |
1.00 |
41 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.96 |
0.98 |
1.92 |
1.87 |
0.00 |
0.51 |
52 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
1.94 |
2.00 |
0.00 |
0.51 |
135 |
| M |
14 |
6 |
6 |
0.60 |
0.67 |
0.97 |
1.63 |
0.97 |
1.00 |
1.38 |
1.58 |
0.00 |
0.84 |
262 |
| |
| Base Pair (2053:2616)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
7 |
4 |
4 |
0.73 |
0.89 |
1.00 |
1.88 |
1.00 |
1.00 |
1.75 |
1.75 |
0.00 |
0.69 |
726 |
| 3 |
3 |
2 |
2 |
0.80 |
0.90 |
1.00 |
1.90 |
1.00 |
1.00 |
1.82 |
1.84 |
0.00 |
0.65 |
412 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.72 |
236 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.13 |
1.13 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
52 |
| E |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.94 |
2.00 |
0.00 |
0.51 |
135 |
| M |
4 |
2 |
2 |
0.67 |
0.88 |
0.99 |
1.87 |
0.99 |
0.99 |
1.66 |
1.65 |
0.00 |
0.84 |
262 |
| |
| Base Pair (2054:2615)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
3 |
5 |
2 |
0.50 |
0.94 |
0.99 |
1.92 |
0.99 |
0.99 |
1.26 |
1.17 |
0.00 |
0.69 |
726 |
| 3 |
1 |
2 |
1 |
0.67 |
0.94 |
0.98 |
1.92 |
0.98 |
0.98 |
1.03 |
0.93 |
0.00 |
0.65 |
412 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.72 |
236 |
| A |
1 |
2 |
1 |
0.67 |
0.59 |
0.78 |
1.37 |
0.78 |
0.78 |
1.00 |
0.50 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
52 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
1 |
2 |
1 |
0.67 |
0.75 |
1.00 |
1.75 |
1.00 |
1.00 |
1.92 |
1.89 |
0.00 |
0.84 |
262 |
| |
|
| Base Pair (2056:2612)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
8 |
7 |
2 |
0.27 |
0.64 |
0.89 |
1.53 |
0.89 |
0.89 |
1.09 |
0.84 |
0.00 |
0.69 |
726 |
| 3 |
2 |
2 |
0 |
0.00 |
0.96 |
0.98 |
1.94 |
0.98 |
0.98 |
1.05 |
1.01 |
0.00 |
0.65 |
412 |
| B |
2 |
2 |
0 |
0.00 |
0.67 |
0.99 |
1.66 |
0.97 |
0.97 |
1.83 |
1.88 |
0.00 |
0.72 |
236 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
2.00 |
1.77 |
0.00 |
0.51 |
52 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
5 |
3 |
2 |
0.50 |
0.05 |
0.00 |
0.05 |
0.93 |
0.93 |
1.83 |
1.65 |
0.00 |
0.84 |
262 |
| |
| Base Pair (2057:2611) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
10 |
10 |
9 |
0.90 |
0.97 |
0.98 |
1.95 |
0.98 |
1.00 |
0.87 |
0.84 |
0.00 |
0.70 |
727 |
| 3 |
6 |
5 |
6 |
1.00 |
0.99 |
0.99 |
1.99 |
0.99 |
0.99 |
0.77 |
0.76 |
0.00 |
0.65 |
412 |
| B |
5 |
4 |
4 |
0.89 |
0.91 |
0.99 |
1.91 |
0.99 |
0.99 |
1.55 |
1.57 |
0.00 |
0.72 |
236 |
| A |
1 |
1 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.86 |
0.86 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.52 |
53 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
3 |
4 |
3 |
0.86 |
0.78 |
0.97 |
1.74 |
0.97 |
1.00 |
1.40 |
1.44 |
0.00 |
0.84 |
262 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)