23S rRNA Model Base Pair Collective Scoring Data for Helical Element 2077
| Base Pair (2077:2243)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
4 |
2 |
1 |
0.33 |
0.22 |
0.99 |
1.21 |
0.99 |
0.99 |
1.86 |
1.93 |
0.00 |
0.81 |
845 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.97 |
2.00 |
0.00 |
0.69 |
436 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
240 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.92 |
2.00 |
0.00 |
0.97 |
100 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.93 |
2.00 |
0.00 |
0.59 |
155 |
| M |
3 |
2 |
1 |
0.40 |
0.25 |
0.98 |
1.23 |
0.98 |
0.98 |
1.73 |
1.84 |
0.01 |
0.98 |
309 |
| |
| Base Pair (2078:2242)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
14 |
18 |
13 |
0.81 |
0.93 |
0.98 |
1.91 |
0.98 |
0.98 |
0.70 |
0.72 |
0.00 |
0.81 |
846 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.97 |
2.00 |
0.00 |
0.69 |
437 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
241 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
4 |
3 |
3 |
0.86 |
0.75 |
0.99 |
1.74 |
0.99 |
1.00 |
1.73 |
1.81 |
0.00 |
0.97 |
100 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.93 |
2.00 |
0.00 |
0.59 |
155 |
| M |
10 |
15 |
10 |
0.80 |
0.90 |
0.95 |
1.85 |
0.95 |
0.95 |
0.17 |
0.18 |
0.00 |
0.99 |
309 |
| |
| Base Pair (2079:2241)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
26 |
22 |
0.83 |
0.92 |
0.98 |
1.91 |
0.98 |
0.98 |
0.87 |
0.90 |
0.00 |
0.81 |
845 |
| 3 |
4 |
4 |
4 |
1.00 |
0.95 |
1.00 |
1.95 |
1.00 |
1.00 |
1.69 |
1.73 |
0.00 |
0.69 |
436 |
| B |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.93 |
1.93 |
0.00 |
0.74 |
240 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.82 |
0.82 |
0.00 |
1.00 |
41 |
| C |
3 |
2 |
2 |
0.80 |
0.67 |
0.99 |
1.66 |
0.99 |
0.99 |
1.81 |
1.86 |
0.00 |
0.97 |
100 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.88 |
2.00 |
0.00 |
0.59 |
155 |
| M |
20 |
20 |
16 |
0.80 |
0.93 |
0.96 |
1.89 |
0.96 |
0.96 |
0.15 |
0.17 |
0.00 |
0.98 |
309 |
| |
| Base Pair (2080:2240)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
44 |
46 |
26 |
0.58 |
0.89 |
0.93 |
1.82 |
0.93 |
0.95 |
-0.02 |
0.00 |
0.00 |
0.81 |
846 |
| 3 |
10 |
8 |
6 |
0.67 |
0.96 |
0.98 |
1.94 |
0.98 |
1.00 |
0.36 |
0.44 |
0.00 |
0.69 |
437 |
| B |
10 |
8 |
6 |
0.67 |
0.95 |
0.98 |
1.93 |
0.98 |
1.00 |
0.98 |
0.93 |
0.00 |
0.74 |
241 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
3 |
3 |
2 |
0.67 |
0.50 |
0.97 |
1.47 |
0.97 |
0.99 |
1.73 |
1.68 |
0.00 |
0.97 |
100 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
0.99 |
1.76 |
1.94 |
0.00 |
0.59 |
155 |
| M |
31 |
34 |
18 |
0.55 |
0.69 |
0.85 |
1.54 |
0.85 |
0.88 |
0.28 |
0.34 |
0.01 |
0.98 |
309 |
| |
|
| Base Pair (2084:2235)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
57 |
54 |
39 |
0.70 |
0.55 |
0.76 |
1.31 |
0.76 |
0.95 |
0.30 |
0.49 |
0.00 |
0.80 |
846 |
| 3 |
13 |
13 |
10 |
0.77 |
0.27 |
0.69 |
0.95 |
0.69 |
0.99 |
0.82 |
1.31 |
0.00 |
0.69 |
437 |
| B |
7 |
6 |
6 |
0.92 |
0.97 |
1.00 |
1.96 |
0.99 |
1.00 |
1.42 |
1.43 |
0.00 |
0.74 |
241 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.98 |
0.98 |
0.00 |
1.00 |
41 |
| C |
5 |
5 |
5 |
1.00 |
0.89 |
0.99 |
1.88 |
0.99 |
1.00 |
1.52 |
1.56 |
0.00 |
0.97 |
100 |
| E |
4 |
5 |
2 |
0.44 |
0.15 |
0.00 |
0.15 |
0.12 |
0.98 |
1.41 |
1.37 |
0.00 |
0.59 |
155 |
| M |
39 |
36 |
24 |
0.64 |
0.68 |
0.78 |
1.46 |
0.78 |
0.84 |
-0.03 |
-0.06 |
0.02 |
0.95 |
309 |
| |
| Base Pair (2085:2234)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
53 |
42 |
22 |
0.46 |
0.44 |
0.65 |
1.09 |
0.65 |
0.95 |
0.23 |
0.51 |
0.00 |
0.80 |
845 |
| 3 |
11 |
2 |
1 |
0.15 |
0.04 |
0.00 |
0.04 |
0.53 |
1.00 |
0.90 |
1.83 |
0.00 |
0.69 |
437 |
| B |
5 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.25 |
1.00 |
1.19 |
2.00 |
0.00 |
0.74 |
241 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.95 |
1.00 |
1.72 |
2.00 |
0.00 |
1.00 |
41 |
| C |
11 |
2 |
1 |
0.15 |
0.17 |
0.00 |
0.17 |
0.65 |
1.00 |
1.02 |
1.64 |
0.00 |
0.97 |
100 |
| E |
5 |
2 |
1 |
0.29 |
0.27 |
0.86 |
1.12 |
0.86 |
0.99 |
1.11 |
1.62 |
0.00 |
0.59 |
155 |
| M |
31 |
38 |
20 |
0.58 |
0.67 |
0.79 |
1.46 |
0.79 |
0.87 |
0.06 |
-0.08 |
0.00 |
0.95 |
308 |
| |
| Base Pair (2086:2233) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
54 |
66 |
35 |
0.58 |
0.42 |
0.68 |
1.10 |
0.68 |
0.70 |
0.46 |
0.46 |
0.00 |
0.80 |
846 |
| 3 |
11 |
14 |
4 |
0.32 |
0.06 |
0.00 |
0.06 |
0.52 |
0.52 |
1.25 |
0.94 |
0.00 |
0.69 |
437 |
| B |
0 |
8 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.40 |
0.40 |
2.00 |
1.03 |
0.00 |
0.74 |
241 |
| A |
1 |
2 |
1 |
0.67 |
0.80 |
0.98 |
1.78 |
0.98 |
0.98 |
1.54 |
1.38 |
0.00 |
1.00 |
41 |
| C |
2 |
3 |
2 |
0.80 |
0.67 |
0.99 |
1.66 |
0.99 |
0.99 |
1.86 |
1.81 |
0.00 |
0.97 |
100 |
| E |
10 |
4 |
3 |
0.43 |
0.13 |
0.00 |
0.13 |
0.60 |
0.60 |
0.75 |
1.59 |
0.00 |
0.59 |
155 |
| M |
41 |
49 |
29 |
0.64 |
0.65 |
0.79 |
1.44 |
0.79 |
0.83 |
0.07 |
0.11 |
0.00 |
0.96 |
309 |
| |
| Base Pair (2087:2232)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
64 |
66 |
46 |
0.71 |
0.83 |
0.92 |
1.74 |
0.92 |
0.96 |
0.24 |
0.15 |
0.00 |
0.80 |
846 |
| 3 |
17 |
18 |
13 |
0.74 |
0.75 |
0.93 |
1.68 |
0.93 |
0.99 |
0.89 |
0.72 |
0.00 |
0.69 |
437 |
| B |
12 |
12 |
10 |
0.83 |
0.92 |
0.97 |
1.90 |
0.97 |
1.00 |
0.70 |
0.65 |
0.00 |
0.74 |
241 |
| A |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.56 |
1.00 |
2.00 |
1.01 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.92 |
1.92 |
0.00 |
0.97 |
100 |
| E |
5 |
5 |
3 |
0.60 |
0.75 |
0.95 |
1.70 |
0.95 |
0.98 |
1.14 |
1.05 |
0.00 |
0.58 |
155 |
| M |
46 |
47 |
32 |
0.69 |
0.78 |
0.85 |
1.63 |
0.85 |
0.89 |
-0.05 |
-0.12 |
0.01 |
0.95 |
309 |
| |
| Base Pair (2088:2231)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
66 |
71 |
47 |
0.69 |
0.65 |
0.79 |
1.44 |
0.79 |
0.96 |
0.01 |
0.26 |
0.01 |
0.79 |
846 |
| 3 |
24 |
28 |
19 |
0.73 |
0.71 |
0.87 |
1.57 |
0.87 |
0.98 |
0.60 |
0.67 |
0.00 |
0.69 |
437 |
| B |
14 |
14 |
10 |
0.71 |
0.81 |
0.92 |
1.73 |
0.92 |
1.00 |
0.95 |
1.00 |
0.00 |
0.74 |
241 |
| A |
3 |
5 |
2 |
0.50 |
0.41 |
0.61 |
1.02 |
0.39 |
1.00 |
0.48 |
0.31 |
0.00 |
1.00 |
41 |
| C |
9 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.20 |
0.96 |
1.08 |
1.68 |
0.00 |
0.97 |
100 |
| E |
7 |
9 |
7 |
0.88 |
0.74 |
0.92 |
1.66 |
0.92 |
0.95 |
0.76 |
0.75 |
0.00 |
0.59 |
155 |
| M |
33 |
41 |
28 |
0.76 |
0.84 |
0.89 |
1.73 |
0.89 |
0.92 |
-0.27 |
-0.04 |
0.05 |
0.92 |
309 |
| |
| Base Pair (2089:2230)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
65 |
50 |
37 |
0.64 |
0.52 |
0.76 |
1.28 |
0.76 |
0.94 |
0.10 |
0.29 |
0.02 |
0.75 |
846 |
| 3 |
20 |
13 |
9 |
0.55 |
0.17 |
0.00 |
0.17 |
0.66 |
0.94 |
0.80 |
1.42 |
0.00 |
0.69 |
437 |
| B |
8 |
2 |
2 |
0.40 |
0.03 |
0.00 |
0.03 |
0.52 |
0.99 |
0.93 |
1.77 |
0.00 |
0.74 |
241 |
| A |
3 |
3 |
2 |
0.67 |
0.29 |
0.88 |
1.16 |
0.88 |
1.00 |
1.09 |
1.46 |
0.00 |
1.00 |
41 |
| C |
9 |
8 |
7 |
0.82 |
0.89 |
0.97 |
1.86 |
0.97 |
0.98 |
0.90 |
1.01 |
0.00 |
0.97 |
100 |
| E |
9 |
8 |
5 |
0.59 |
0.64 |
0.92 |
1.55 |
0.83 |
0.86 |
0.88 |
1.02 |
0.00 |
0.59 |
155 |
| M |
36 |
29 |
21 |
0.65 |
0.71 |
0.84 |
1.56 |
0.84 |
0.91 |
-0.16 |
-0.30 |
0.08 |
0.80 |
309 |
| |
| Base Pair (2090:2229)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
30 |
35 |
17 |
0.52 |
0.62 |
0.89 |
1.51 |
0.89 |
0.90 |
0.34 |
0.34 |
0.01 |
0.71 |
846 |
| 3 |
12 |
15 |
8 |
0.59 |
0.68 |
0.89 |
1.57 |
0.89 |
0.90 |
0.64 |
0.79 |
0.00 |
0.69 |
437 |
| B |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.79 |
1.79 |
0.00 |
0.74 |
241 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.44 |
1.44 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.97 |
100 |
| E |
6 |
9 |
2 |
0.27 |
0.54 |
0.69 |
1.23 |
0.69 |
0.71 |
0.52 |
0.43 |
0.00 |
0.58 |
155 |
| M |
18 |
20 |
9 |
0.47 |
0.45 |
0.85 |
1.30 |
0.85 |
0.86 |
-0.05 |
-0.28 |
0.05 |
0.68 |
309 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)