23S rRNA Model Base Pair Collective Scoring Data for Helical Element 2347
| Base Pair (2347:2370)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
10 |
11 |
4 |
0.38 |
0.83 |
0.95 |
1.77 |
0.93 |
0.95 |
-0.20 |
-0.14 |
0.04 |
0.60 |
849 |
| 3 |
2 |
3 |
1 |
0.40 |
0.95 |
0.98 |
1.94 |
0.98 |
0.99 |
0.97 |
1.02 |
0.01 |
0.69 |
438 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.96 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.72 |
1.72 |
0.00 |
1.00 |
41 |
| C |
3 |
2 |
1 |
0.40 |
0.67 |
0.98 |
1.65 |
0.98 |
1.00 |
1.68 |
1.76 |
0.00 |
0.99 |
102 |
| E |
1 |
2 |
0 |
0.00 |
0.67 |
0.97 |
1.63 |
0.96 |
0.97 |
1.35 |
1.60 |
0.01 |
0.58 |
155 |
| M |
5 |
6 |
2 |
0.36 |
0.45 |
0.73 |
1.18 |
0.68 |
0.79 |
-0.83 |
-0.73 |
0.15 |
0.26 |
309 |
| |
| Base Pair (2348:2369)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
30 |
29 |
15 |
0.51 |
0.86 |
0.95 |
1.81 |
0.95 |
0.96 |
0.30 |
0.31 |
0.00 |
0.77 |
849 |
| 3 |
9 |
9 |
6 |
0.67 |
0.86 |
0.98 |
1.84 |
0.98 |
0.99 |
1.28 |
1.21 |
0.00 |
0.69 |
438 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
5 |
5 |
5 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.07 |
0.07 |
0.00 |
1.00 |
41 |
| C |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.92 |
2.00 |
0.00 |
0.99 |
102 |
| E |
4 |
4 |
1 |
0.25 |
0.76 |
0.94 |
1.70 |
0.94 |
0.98 |
1.21 |
1.04 |
0.00 |
0.59 |
155 |
| M |
20 |
20 |
9 |
0.45 |
0.83 |
0.89 |
1.72 |
0.89 |
0.91 |
-0.27 |
-0.27 |
0.01 |
0.84 |
309 |
| |
| Base Pair (2349:2368)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
29 |
18 |
0.64 |
0.90 |
0.95 |
1.85 |
0.95 |
0.97 |
0.00 |
0.04 |
0.00 |
0.77 |
848 |
| 3 |
8 |
9 |
5 |
0.59 |
0.91 |
0.97 |
1.88 |
0.97 |
0.98 |
0.59 |
0.58 |
0.00 |
0.69 |
437 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.96 |
0.00 |
0.74 |
241 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.64 |
0.64 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
6 |
7 |
3 |
0.46 |
0.76 |
0.91 |
1.67 |
0.91 |
0.95 |
0.81 |
0.78 |
0.00 |
0.59 |
155 |
| M |
19 |
20 |
13 |
0.67 |
0.80 |
0.91 |
1.71 |
0.91 |
0.95 |
-0.36 |
-0.25 |
0.00 |
0.84 |
309 |
| |
| Base Pair (2350:2367)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
67 |
46 |
22 |
0.39 |
0.34 |
0.57 |
0.90 |
0.57 |
0.68 |
0.24 |
-0.07 |
0.01 |
0.77 |
849 |
| 3 |
24 |
18 |
11 |
0.52 |
0.48 |
0.72 |
1.19 |
0.57 |
0.73 |
0.63 |
0.65 |
0.00 |
0.69 |
438 |
| B |
14 |
7 |
5 |
0.48 |
0.30 |
0.83 |
1.13 |
0.83 |
0.98 |
1.19 |
1.49 |
0.00 |
0.74 |
242 |
| A |
3 |
4 |
3 |
0.86 |
0.75 |
0.90 |
1.65 |
0.66 |
1.00 |
0.87 |
0.82 |
0.00 |
1.00 |
41 |
| C |
9 |
9 |
7 |
0.78 |
0.55 |
0.87 |
1.42 |
0.87 |
0.97 |
1.00 |
1.31 |
0.00 |
0.99 |
102 |
| E |
7 |
7 |
3 |
0.43 |
0.37 |
0.80 |
1.17 |
0.14 |
0.28 |
1.15 |
0.85 |
0.00 |
0.59 |
155 |
| M |
34 |
19 |
4 |
0.15 |
0.11 |
0.00 |
0.11 |
0.44 |
0.47 |
-0.16 |
0.17 |
0.02 |
0.83 |
309 |
| |
| Base Pair (2351:2366) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
59 |
28 |
12 |
0.28 |
0.11 |
0.00 |
0.11 |
0.22 |
0.24 |
0.14 |
0.78 |
0.01 |
0.76 |
849 |
| 3 |
16 |
16 |
7 |
0.44 |
0.24 |
0.79 |
1.03 |
0.18 |
0.21 |
1.20 |
0.99 |
0.00 |
0.69 |
438 |
| B |
7 |
4 |
1 |
0.18 |
0.03 |
0.00 |
0.03 |
0.01 |
0.02 |
1.44 |
1.75 |
0.00 |
0.74 |
242 |
| A |
4 |
4 |
2 |
0.50 |
0.81 |
0.90 |
1.71 |
0.90 |
1.00 |
0.77 |
0.80 |
0.00 |
1.00 |
41 |
| C |
8 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.35 |
2.00 |
0.00 |
0.99 |
102 |
| E |
5 |
8 |
4 |
0.61 |
0.22 |
0.77 |
0.98 |
0.27 |
0.30 |
1.30 |
0.83 |
0.00 |
0.59 |
155 |
| M |
35 |
12 |
5 |
0.21 |
0.04 |
0.00 |
0.04 |
0.38 |
0.38 |
-0.14 |
0.42 |
0.04 |
0.82 |
309 |
| |
| Base Pair (2352:2365) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
16 |
52 |
11 |
0.32 |
0.09 |
0.00 |
0.09 |
0.34 |
0.35 |
0.64 |
0.07 |
0.06 |
0.71 |
849 |
| 3 |
9 |
13 |
8 |
0.73 |
0.12 |
0.00 |
0.12 |
0.45 |
0.45 |
1.30 |
0.59 |
0.00 |
0.69 |
438 |
| B |
1 |
6 |
1 |
0.29 |
0.04 |
0.00 |
0.04 |
0.00 |
0.00 |
1.96 |
1.56 |
0.00 |
0.74 |
242 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.76 |
0.76 |
0.00 |
1.00 |
41 |
| C |
0 |
9 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
2.00 |
1.45 |
0.00 |
0.99 |
102 |
| E |
5 |
4 |
4 |
0.89 |
0.93 |
0.99 |
1.92 |
0.99 |
0.99 |
1.45 |
1.50 |
0.00 |
0.59 |
155 |
| M |
7 |
30 |
3 |
0.16 |
0.07 |
0.00 |
0.07 |
0.28 |
0.30 |
-0.09 |
-0.17 |
0.21 |
0.64 |
309 |
| |
| Base Pair (2353:2364)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
28 |
25 |
15 |
0.57 |
0.85 |
0.95 |
1.80 |
0.95 |
0.99 |
0.36 |
0.23 |
0.01 |
0.76 |
849 |
| 3 |
15 |
14 |
9 |
0.62 |
0.84 |
0.92 |
1.76 |
0.92 |
0.98 |
0.59 |
0.44 |
0.00 |
0.69 |
438 |
| B |
4 |
3 |
2 |
0.57 |
0.60 |
0.98 |
1.58 |
0.98 |
0.98 |
1.77 |
1.71 |
0.01 |
0.74 |
242 |
| A |
3 |
3 |
3 |
1.00 |
0.75 |
0.93 |
1.68 |
0.93 |
0.98 |
1.13 |
1.08 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
0 |
0.00 |
0.33 |
0.98 |
1.31 |
0.98 |
1.00 |
1.92 |
1.81 |
0.00 |
0.99 |
102 |
| E |
8 |
8 |
4 |
0.50 |
0.30 |
0.83 |
1.13 |
0.83 |
0.99 |
1.37 |
1.07 |
0.00 |
0.59 |
155 |
| M |
12 |
10 |
6 |
0.55 |
0.90 |
0.98 |
1.88 |
0.98 |
0.99 |
0.12 |
0.02 |
0.04 |
0.81 |
309 |
| |
| Base Pair (2354:2363)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
25 |
25 |
18 |
0.72 |
0.95 |
0.98 |
1.93 |
0.98 |
0.99 |
0.30 |
0.31 |
0.00 |
0.77 |
849 |
| 3 |
14 |
12 |
11 |
0.85 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.41 |
0.40 |
0.00 |
0.69 |
438 |
| B |
8 |
8 |
7 |
0.88 |
0.93 |
0.99 |
1.92 |
0.99 |
1.00 |
1.32 |
1.31 |
0.00 |
0.74 |
242 |
| A |
2 |
1 |
1 |
0.67 |
0.75 |
0.95 |
1.70 |
0.95 |
1.00 |
1.01 |
1.22 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
4 |
3 |
3 |
0.86 |
0.88 |
0.99 |
1.86 |
0.99 |
0.99 |
1.38 |
1.41 |
0.00 |
0.59 |
155 |
| M |
11 |
13 |
7 |
0.58 |
0.84 |
0.97 |
1.80 |
0.97 |
0.97 |
0.37 |
0.41 |
0.00 |
0.86 |
309 |
| |
| Base Pair (2355:2362)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
42 |
42 |
29 |
0.69 |
0.56 |
0.79 |
1.35 |
0.79 |
0.97 |
0.06 |
0.40 |
0.00 |
0.77 |
849 |
| 3 |
17 |
21 |
12 |
0.63 |
0.33 |
0.65 |
0.98 |
0.65 |
0.97 |
0.45 |
0.97 |
0.00 |
0.69 |
438 |
| B |
9 |
14 |
9 |
0.78 |
0.94 |
0.99 |
1.93 |
0.99 |
0.99 |
1.10 |
1.02 |
0.00 |
0.74 |
242 |
| A |
4 |
3 |
3 |
0.86 |
0.25 |
0.56 |
0.81 |
0.54 |
0.95 |
0.55 |
1.13 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.78 |
1.78 |
0.00 |
0.99 |
102 |
| E |
4 |
4 |
0 |
0.00 |
0.20 |
0.00 |
0.20 |
0.15 |
0.95 |
1.47 |
1.03 |
0.00 |
0.59 |
155 |
| M |
24 |
20 |
16 |
0.73 |
0.89 |
0.94 |
1.82 |
0.94 |
0.94 |
-0.34 |
-0.34 |
0.00 |
0.87 |
309 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)