23S rRNA Model Base Pair Collective Scoring Data for Helical Element 235
| Base Pair (235:262)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
25 |
21 |
13 |
0.56 |
0.54 |
0.95 |
1.49 |
0.95 |
0.97 |
0.49 |
0.28 |
0.08 |
0.63 |
863 |
| 3 |
9 |
13 |
8 |
0.73 |
0.72 |
0.97 |
1.70 |
0.97 |
1.00 |
1.40 |
1.41 |
0.01 |
0.80 |
509 |
| B |
2 |
3 |
1 |
0.40 |
0.67 |
1.00 |
1.66 |
1.00 |
1.00 |
1.90 |
1.88 |
0.00 |
0.84 |
274 |
| A |
4 |
4 |
3 |
0.75 |
0.68 |
0.81 |
1.49 |
0.81 |
1.00 |
0.46 |
0.12 |
0.00 |
0.88 |
36 |
| C |
0 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
1.00 |
2.00 |
1.81 |
0.00 |
0.97 |
100 |
| E |
3 |
6 |
4 |
0.89 |
0.58 |
0.97 |
1.56 |
0.97 |
0.99 |
1.62 |
1.62 |
0.01 |
0.74 |
199 |
| M |
16 |
6 |
5 |
0.46 |
0.23 |
0.66 |
0.89 |
0.66 |
0.68 |
-0.74 |
-0.55 |
0.28 |
0.16 |
254 |
| |
| Base Pair (236:261)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
53 |
53 |
33 |
0.62 |
0.74 |
0.91 |
1.65 |
0.91 |
0.92 |
0.27 |
0.07 |
0.03 |
0.76 |
865 |
| 3 |
19 |
19 |
14 |
0.74 |
0.94 |
0.99 |
1.92 |
0.99 |
0.99 |
1.03 |
0.87 |
0.01 |
0.80 |
511 |
| B |
8 |
9 |
6 |
0.71 |
0.96 |
0.99 |
1.95 |
0.99 |
0.99 |
1.20 |
1.02 |
0.01 |
0.83 |
276 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.19 |
1.19 |
0.00 |
0.88 |
36 |
| C |
7 |
8 |
7 |
0.93 |
0.80 |
0.97 |
1.77 |
0.97 |
0.97 |
1.47 |
1.30 |
0.00 |
0.97 |
100 |
| E |
9 |
8 |
6 |
0.71 |
0.91 |
0.97 |
1.88 |
0.97 |
0.98 |
0.84 |
0.69 |
0.01 |
0.75 |
199 |
| M |
27 |
26 |
12 |
0.45 |
0.43 |
0.65 |
1.09 |
0.65 |
0.71 |
-0.27 |
-0.49 |
0.08 |
0.60 |
254 |
| |
| Base Pair (237:260)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
36 |
31 |
12 |
0.36 |
0.45 |
0.87 |
1.31 |
0.87 |
0.91 |
0.79 |
0.72 |
0.01 |
0.79 |
864 |
| 3 |
7 |
4 |
1 |
0.18 |
0.26 |
0.95 |
1.21 |
0.95 |
1.00 |
1.66 |
1.72 |
0.01 |
0.80 |
510 |
| B |
4 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.95 |
1.00 |
1.73 |
1.96 |
0.00 |
0.84 |
274 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.88 |
36 |
| C |
4 |
3 |
2 |
0.57 |
0.43 |
0.96 |
1.39 |
0.96 |
0.98 |
1.71 |
1.67 |
0.00 |
0.97 |
100 |
| E |
3 |
4 |
1 |
0.29 |
0.41 |
0.93 |
1.34 |
0.93 |
0.99 |
1.53 |
1.44 |
0.02 |
0.74 |
200 |
| M |
25 |
24 |
9 |
0.37 |
0.49 |
0.64 |
1.13 |
0.64 |
0.67 |
-0.18 |
-0.37 |
0.01 |
0.70 |
254 |
| |
| Base Pair (238:259)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
48 |
41 |
30 |
0.67 |
0.73 |
0.91 |
1.65 |
0.91 |
0.92 |
0.43 |
0.32 |
0.01 |
0.80 |
867 |
| 3 |
19 |
20 |
19 |
0.97 |
0.93 |
0.98 |
1.91 |
0.98 |
1.00 |
0.97 |
0.83 |
0.01 |
0.81 |
513 |
| B |
13 |
14 |
14 |
1.00 |
0.90 |
0.97 |
1.86 |
0.97 |
1.00 |
1.05 |
0.82 |
0.01 |
0.83 |
276 |
| A |
1 |
1 |
0 |
0.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.00 |
1.00 |
0.00 |
0.88 |
36 |
| C |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
0.98 |
2.00 |
1.86 |
0.00 |
0.97 |
100 |
| E |
5 |
5 |
5 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.43 |
1.42 |
0.00 |
0.76 |
201 |
| M |
29 |
20 |
11 |
0.45 |
0.41 |
0.60 |
1.01 |
0.72 |
0.73 |
-0.29 |
-0.37 |
0.02 |
0.72 |
254 |
| |
| Base Pair (239:258)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
88 |
82 |
33 |
0.39 |
0.25 |
0.42 |
0.67 |
0.47 |
0.72 |
0.25 |
-0.19 |
0.01 |
0.80 |
866 |
| 3 |
52 |
42 |
18 |
0.38 |
0.22 |
0.47 |
0.69 |
0.37 |
0.70 |
0.71 |
0.13 |
0.00 |
0.81 |
512 |
| B |
27 |
21 |
9 |
0.38 |
0.26 |
0.61 |
0.87 |
0.44 |
0.92 |
0.67 |
0.41 |
0.00 |
0.84 |
276 |
| A |
3 |
3 |
2 |
0.67 |
0.50 |
0.89 |
1.39 |
0.17 |
0.94 |
1.28 |
1.12 |
0.00 |
0.88 |
36 |
| C |
11 |
19 |
6 |
0.40 |
0.28 |
0.49 |
0.77 |
0.42 |
0.64 |
0.48 |
0.30 |
0.00 |
0.97 |
100 |
| E |
22 |
18 |
7 |
0.35 |
0.36 |
0.55 |
0.91 |
0.30 |
0.34 |
0.84 |
0.47 |
0.00 |
0.76 |
200 |
| M |
25 |
21 |
9 |
0.39 |
0.58 |
0.74 |
1.32 |
0.74 |
0.81 |
0.08 |
-0.01 |
0.02 |
0.73 |
254 |
| |
|
| Base Pair (245:253)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
25 |
14 |
0.58 |
0.78 |
0.90 |
1.67 |
0.90 |
0.93 |
0.31 |
0.35 |
0.00 |
0.82 |
868 |
| 3 |
10 |
10 |
4 |
0.40 |
0.63 |
0.86 |
1.49 |
0.86 |
0.91 |
1.06 |
1.10 |
0.00 |
0.82 |
514 |
| B |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.93 |
1.97 |
0.00 |
0.85 |
277 |
| A |
2 |
3 |
0 |
0.00 |
0.83 |
0.94 |
1.78 |
0.94 |
0.97 |
0.98 |
0.98 |
0.00 |
0.88 |
36 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.97 |
100 |
| E |
7 |
7 |
4 |
0.57 |
0.31 |
0.68 |
0.98 |
0.68 |
0.80 |
1.12 |
1.03 |
0.00 |
0.76 |
201 |
| M |
13 |
15 |
10 |
0.71 |
0.82 |
0.93 |
1.74 |
0.93 |
0.94 |
0.07 |
0.09 |
0.00 |
0.77 |
254 |
| |
| Base Pair (246:252)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
43 |
33 |
24 |
0.63 |
0.64 |
0.83 |
1.48 |
0.83 |
0.99 |
0.18 |
0.49 |
0.00 |
0.81 |
868 |
| 3 |
20 |
15 |
13 |
0.74 |
0.34 |
0.81 |
1.15 |
0.81 |
1.00 |
0.83 |
1.34 |
0.00 |
0.81 |
514 |
| B |
9 |
2 |
2 |
0.36 |
0.02 |
0.00 |
0.02 |
0.65 |
1.00 |
1.03 |
1.85 |
0.00 |
0.85 |
277 |
| A |
4 |
5 |
4 |
0.89 |
0.94 |
0.97 |
1.91 |
0.97 |
1.00 |
0.36 |
0.31 |
0.00 |
0.88 |
36 |
| C |
7 |
3 |
1 |
0.20 |
0.29 |
0.85 |
1.14 |
0.85 |
1.00 |
1.26 |
1.67 |
0.00 |
0.97 |
100 |
| E |
7 |
8 |
7 |
0.93 |
0.91 |
0.99 |
1.90 |
0.99 |
1.00 |
1.34 |
1.43 |
0.00 |
0.76 |
201 |
| M |
16 |
15 |
10 |
0.65 |
0.78 |
0.89 |
1.67 |
0.89 |
0.97 |
-0.07 |
-0.10 |
0.00 |
0.77 |
254 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)