23S rRNA Model Base Pair Collective Scoring Data for Helical Element 2395
| Base Pair (2395:2421)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
12 |
13 |
7 |
0.56 |
0.70 |
0.97 |
1.67 |
0.97 |
0.98 |
1.36 |
1.36 |
0.00 |
0.80 |
847 |
| 3 |
4 |
6 |
3 |
0.60 |
0.84 |
0.99 |
1.83 |
0.99 |
0.99 |
1.58 |
1.49 |
0.00 |
0.69 |
437 |
| B |
2 |
5 |
2 |
0.57 |
0.73 |
0.99 |
1.72 |
0.99 |
0.99 |
1.79 |
1.65 |
0.00 |
0.74 |
241 |
| A |
1 |
1 |
1 |
1.00 |
0.95 |
0.98 |
1.93 |
0.98 |
1.00 |
1.00 |
0.86 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.86 |
1.86 |
0.00 |
0.98 |
101 |
| E |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.94 |
1.93 |
0.00 |
0.59 |
155 |
| M |
7 |
6 |
3 |
0.46 |
0.54 |
0.95 |
1.49 |
0.95 |
0.96 |
1.06 |
1.17 |
0.00 |
0.94 |
309 |
| |
| Base Pair (2396:2420)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
24 |
20 |
0.85 |
0.97 |
0.99 |
1.96 |
0.99 |
1.00 |
0.18 |
0.17 |
0.00 |
0.80 |
847 |
| 3 |
5 |
6 |
4 |
0.73 |
0.98 |
0.99 |
1.98 |
0.99 |
1.00 |
0.54 |
0.52 |
0.00 |
0.69 |
437 |
| B |
3 |
2 |
1 |
0.40 |
0.75 |
1.00 |
1.75 |
1.00 |
1.00 |
1.85 |
1.86 |
0.00 |
0.74 |
241 |
| A |
2 |
2 |
2 |
1.00 |
0.92 |
0.98 |
1.90 |
0.98 |
1.00 |
0.74 |
0.85 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.98 |
101 |
| E |
0 |
2 |
1 |
1.00 |
0.86 |
0.99 |
1.85 |
0.99 |
1.00 |
1.70 |
1.67 |
0.00 |
0.59 |
155 |
| M |
18 |
18 |
16 |
0.89 |
0.93 |
0.97 |
1.90 |
0.97 |
0.99 |
0.32 |
0.34 |
0.00 |
0.95 |
309 |
| |
| Base Pair (2397:2419)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
37 |
29 |
20 |
0.61 |
0.42 |
0.62 |
1.05 |
0.45 |
0.99 |
0.10 |
0.54 |
0.00 |
0.79 |
848 |
| 3 |
7 |
5 |
3 |
0.50 |
0.83 |
0.92 |
1.75 |
0.08 |
1.00 |
0.60 |
0.95 |
0.00 |
0.69 |
438 |
| B |
4 |
2 |
1 |
0.33 |
0.38 |
0.98 |
1.35 |
0.03 |
1.00 |
1.71 |
1.86 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
1 |
1.00 |
0.40 |
0.71 |
1.11 |
0.49 |
1.00 |
0.53 |
1.29 |
0.00 |
1.00 |
41 |
| C |
3 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.93 |
1.00 |
1.64 |
2.00 |
0.00 |
0.98 |
101 |
| E |
2 |
2 |
1 |
0.50 |
0.71 |
0.99 |
1.70 |
0.04 |
1.00 |
1.74 |
1.67 |
0.00 |
0.59 |
155 |
| M |
27 |
24 |
17 |
0.67 |
0.63 |
0.85 |
1.49 |
0.85 |
0.98 |
0.16 |
0.23 |
0.00 |
0.92 |
309 |
| |
| Base Pair (2398:2418)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
28 |
29 |
25 |
0.88 |
0.96 |
0.98 |
1.94 |
0.98 |
0.99 |
-0.11 |
-0.11 |
0.00 |
0.69 |
848 |
| 3 |
11 |
11 |
11 |
1.00 |
0.97 |
0.99 |
1.97 |
0.99 |
0.99 |
0.99 |
1.00 |
0.00 |
0.69 |
438 |
| B |
5 |
6 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.17 |
1.22 |
0.00 |
0.74 |
242 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.76 |
0.76 |
0.00 |
1.00 |
41 |
| C |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.86 |
1.86 |
0.00 |
0.98 |
101 |
| E |
4 |
3 |
3 |
0.86 |
0.91 |
0.98 |
1.89 |
0.98 |
0.99 |
1.05 |
1.00 |
0.00 |
0.59 |
155 |
| M |
15 |
16 |
12 |
0.77 |
0.91 |
0.94 |
1.86 |
0.94 |
0.97 |
-0.88 |
-0.88 |
0.00 |
0.58 |
309 |
| |
| Base Pair (2399:2417)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
31 |
27 |
23 |
0.79 |
0.94 |
0.98 |
1.92 |
0.98 |
0.99 |
-0.45 |
-0.45 |
0.00 |
0.60 |
846 |
| 3 |
18 |
15 |
11 |
0.67 |
0.95 |
0.98 |
1.94 |
0.98 |
0.99 |
0.54 |
0.52 |
0.00 |
0.69 |
436 |
| B |
7 |
5 |
2 |
0.33 |
0.85 |
0.99 |
1.84 |
0.99 |
0.99 |
1.53 |
1.60 |
0.00 |
0.74 |
240 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.75 |
0.75 |
0.00 |
1.00 |
41 |
| C |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.76 |
1.76 |
0.00 |
0.98 |
101 |
| E |
8 |
7 |
6 |
0.80 |
0.93 |
0.97 |
1.89 |
0.97 |
1.00 |
0.35 |
0.38 |
0.00 |
0.59 |
155 |
| M |
11 |
10 |
10 |
0.95 |
0.89 |
0.93 |
1.82 |
0.93 |
0.95 |
-0.88 |
-0.87 |
0.00 |
0.30 |
309 |
| |
| Base Pair (2400:2416)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
26 |
26 |
21 |
0.81 |
0.63 |
0.94 |
1.57 |
0.94 |
0.94 |
-0.16 |
-0.02 |
0.01 |
0.55 |
848 |
| 3 |
10 |
9 |
6 |
0.63 |
0.47 |
0.94 |
1.41 |
0.94 |
0.94 |
1.00 |
1.46 |
0.02 |
0.66 |
438 |
| B |
3 |
4 |
3 |
0.86 |
0.87 |
0.99 |
1.86 |
0.99 |
0.99 |
1.59 |
1.65 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
5 |
5 |
4 |
0.80 |
0.88 |
0.99 |
1.86 |
0.99 |
0.99 |
1.60 |
1.56 |
0.00 |
0.98 |
101 |
| E |
7 |
5 |
3 |
0.50 |
0.28 |
0.83 |
1.11 |
0.83 |
0.83 |
0.18 |
1.16 |
0.05 |
0.50 |
155 |
| M |
11 |
12 |
11 |
0.96 |
0.73 |
0.84 |
1.57 |
0.84 |
0.87 |
-0.66 |
-0.63 |
0.00 |
0.18 |
309 |
| |
| Base Pair (2401:2415)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
30 |
23 |
14 |
0.53 |
0.13 |
0.00 |
0.13 |
0.30 |
0.95 |
-0.33 |
0.08 |
0.00 |
0.56 |
847 |
| 3 |
21 |
10 |
8 |
0.52 |
0.10 |
0.00 |
0.10 |
0.35 |
0.94 |
0.70 |
1.49 |
0.00 |
0.69 |
437 |
| B |
4 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.07 |
1.00 |
1.61 |
1.95 |
0.00 |
0.74 |
241 |
| A |
4 |
2 |
1 |
0.33 |
0.42 |
0.83 |
1.25 |
0.83 |
0.95 |
0.84 |
1.34 |
0.00 |
1.00 |
41 |
| C |
3 |
4 |
2 |
0.57 |
0.43 |
0.96 |
1.39 |
0.02 |
0.95 |
1.73 |
1.60 |
0.00 |
0.98 |
101 |
| E |
13 |
8 |
7 |
0.67 |
0.27 |
0.67 |
0.93 |
0.67 |
0.86 |
0.43 |
1.08 |
0.00 |
0.59 |
155 |
| M |
6 |
9 |
4 |
0.53 |
0.27 |
0.68 |
0.95 |
0.42 |
0.98 |
-0.49 |
-0.53 |
0.00 |
0.16 |
309 |
| |
|
| Base Pair (2403:2414)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
22 |
21 |
0.93 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
-0.36 |
-0.36 |
0.00 |
0.56 |
848 |
| 3 |
12 |
10 |
10 |
0.91 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
0.70 |
0.69 |
0.00 |
0.69 |
438 |
| B |
5 |
5 |
5 |
1.00 |
0.97 |
1.00 |
1.97 |
1.00 |
1.00 |
1.37 |
1.29 |
0.00 |
0.74 |
242 |
| A |
2 |
0 |
0 |
0.00 |
0.25 |
0.93 |
1.18 |
0.93 |
0.95 |
1.44 |
1.83 |
0.00 |
1.00 |
41 |
| C |
2 |
3 |
2 |
0.80 |
0.67 |
0.99 |
1.66 |
0.99 |
0.99 |
1.86 |
1.81 |
0.00 |
0.98 |
101 |
| E |
5 |
5 |
5 |
1.00 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.96 |
0.89 |
0.00 |
0.59 |
155 |
| M |
9 |
9 |
9 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
-0.53 |
-0.55 |
0.00 |
0.15 |
309 |
| |
| Base Pair (2404:2413)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
29 |
21 |
17 |
0.68 |
0.66 |
0.82 |
1.48 |
0.82 |
0.98 |
-0.58 |
-0.48 |
0.00 |
0.56 |
848 |
| 3 |
16 |
9 |
7 |
0.56 |
0.63 |
0.78 |
1.41 |
0.78 |
0.98 |
0.43 |
0.52 |
0.00 |
0.69 |
438 |
| B |
10 |
5 |
4 |
0.53 |
0.19 |
0.00 |
0.19 |
0.67 |
0.99 |
0.69 |
1.47 |
0.00 |
0.74 |
242 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.68 |
1.00 |
1.10 |
2.00 |
0.00 |
1.00 |
41 |
| C |
6 |
6 |
5 |
0.83 |
0.86 |
0.98 |
1.84 |
0.98 |
1.00 |
1.42 |
1.47 |
0.00 |
0.98 |
101 |
| E |
5 |
4 |
3 |
0.67 |
0.85 |
0.96 |
1.81 |
0.96 |
0.96 |
0.88 |
0.89 |
0.00 |
0.59 |
155 |
| M |
7 |
6 |
5 |
0.77 |
0.74 |
0.85 |
1.59 |
0.85 |
0.87 |
-0.54 |
-0.53 |
0.00 |
0.15 |
309 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)