23S rRNA Model Base Pair Collective Scoring Data for Helical Element 2455
| Base Pair (2455:2496)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
10 |
8 |
3 |
0.33 |
0.62 |
0.79 |
1.41 |
0.79 |
1.00 |
0.90 |
0.47 |
0.00 |
0.79 |
828 |
| 3 |
4 |
1 |
0 |
0.00 |
0.14 |
0.00 |
0.14 |
0.63 |
1.00 |
1.67 |
1.01 |
0.00 |
0.67 |
420 |
| B |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.00 |
1.91 |
1.93 |
0.00 |
0.74 |
241 |
| A |
4 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.61 |
1.00 |
1.03 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.53 |
138 |
| M |
6 |
6 |
3 |
0.50 |
0.76 |
0.95 |
1.71 |
0.95 |
0.99 |
1.22 |
1.14 |
0.00 |
0.98 |
306 |
| |
| Base Pair (2456:2495)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
11 |
11 |
9 |
0.82 |
0.68 |
0.83 |
1.51 |
0.83 |
0.83 |
0.89 |
0.40 |
0.00 |
0.79 |
829 |
| 3 |
3 |
2 |
2 |
0.80 |
0.21 |
0.68 |
0.89 |
0.68 |
0.68 |
1.55 |
0.72 |
0.00 |
0.67 |
421 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.47 |
1.47 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.01 |
1.94 |
2.00 |
0.00 |
0.53 |
138 |
| M |
8 |
8 |
7 |
0.88 |
0.97 |
0.99 |
1.97 |
0.99 |
1.00 |
0.95 |
0.96 |
0.00 |
0.98 |
306 |
| |
| Base Pair (2457:2494)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
5 |
6 |
3 |
0.55 |
0.94 |
0.98 |
1.92 |
0.03 |
0.76 |
1.07 |
1.08 |
0.00 |
0.79 |
829 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.94 |
2.00 |
0.00 |
0.67 |
421 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.90 |
2.00 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.53 |
138 |
| M |
5 |
6 |
3 |
0.55 |
0.90 |
0.96 |
1.86 |
0.07 |
0.36 |
0.87 |
0.90 |
0.00 |
0.98 |
306 |
| |
|
| Base Pair (2459:2493)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
9 |
7 |
6 |
0.75 |
0.07 |
0.00 |
0.07 |
0.78 |
1.00 |
1.11 |
1.80 |
0.00 |
0.79 |
829 |
| 3 |
1 |
1 |
1 |
1.00 |
0.01 |
0.00 |
0.01 |
0.58 |
1.00 |
1.01 |
1.93 |
0.00 |
0.67 |
421 |
| B |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.93 |
1.93 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
1.79 |
0.02 |
0.98 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.53 |
138 |
| M |
7 |
6 |
5 |
0.77 |
0.86 |
0.99 |
1.85 |
0.99 |
0.99 |
1.61 |
1.62 |
0.00 |
0.97 |
306 |
| |
|
| Base Pair (2460:2490)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
1 |
3 |
0 |
0.00 |
0.07 |
0.00 |
0.07 |
0.01 |
0.83 |
1.85 |
1.25 |
0.00 |
0.79 |
828 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.67 |
2.00 |
1.06 |
0.00 |
0.67 |
420 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
241 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
2.00 |
1.92 |
0.00 |
0.52 |
138 |
| M |
1 |
3 |
0 |
0.00 |
0.67 |
0.98 |
1.65 |
0.03 |
0.98 |
1.68 |
1.63 |
0.00 |
0.97 |
306 |
| |
| Base Pair (2461:2489)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
28 |
26 |
19 |
0.70 |
0.59 |
0.85 |
1.44 |
0.81 |
0.99 |
0.45 |
0.57 |
0.00 |
0.78 |
827 |
| 3 |
9 |
7 |
4 |
0.50 |
0.65 |
0.81 |
1.46 |
0.67 |
1.00 |
0.46 |
0.69 |
0.00 |
0.66 |
419 |
| B |
8 |
7 |
4 |
0.53 |
0.95 |
0.98 |
1.94 |
0.98 |
1.00 |
0.70 |
0.65 |
0.01 |
0.73 |
240 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.92 |
1.92 |
0.00 |
0.99 |
102 |
| E |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.04 |
1.00 |
1.77 |
2.00 |
0.00 |
0.53 |
138 |
| M |
18 |
17 |
14 |
0.80 |
0.82 |
0.95 |
1.78 |
0.95 |
0.97 |
0.57 |
0.61 |
0.00 |
0.95 |
306 |
| |
| Base Pair (2462:2488)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
36 |
37 |
30 |
0.82 |
0.93 |
0.96 |
1.89 |
0.96 |
0.97 |
0.09 |
0.02 |
0.00 |
0.78 |
828 |
| 3 |
14 |
12 |
12 |
0.92 |
0.90 |
0.94 |
1.85 |
0.94 |
0.94 |
0.26 |
0.14 |
0.00 |
0.67 |
420 |
| B |
11 |
9 |
9 |
0.90 |
0.82 |
0.90 |
1.72 |
0.90 |
0.90 |
0.49 |
0.25 |
0.00 |
0.74 |
241 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.64 |
0.64 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.92 |
1.92 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.53 |
138 |
| M |
21 |
24 |
17 |
0.76 |
0.90 |
0.96 |
1.85 |
0.96 |
0.99 |
0.29 |
0.34 |
0.00 |
0.95 |
306 |
| |
| Base Pair (2463:2487)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
37 |
38 |
31 |
0.83 |
0.91 |
0.96 |
1.87 |
0.96 |
0.99 |
0.70 |
0.71 |
0.00 |
0.78 |
829 |
| 3 |
5 |
5 |
5 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.41 |
1.44 |
0.00 |
0.67 |
421 |
| B |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.22 |
1.22 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.83 |
1.83 |
0.00 |
1.00 |
41 |
| C |
6 |
6 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.08 |
1.08 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.92 |
2.00 |
0.00 |
0.53 |
138 |
| M |
26 |
27 |
20 |
0.76 |
0.79 |
0.90 |
1.68 |
0.90 |
0.98 |
0.41 |
0.29 |
0.00 |
0.94 |
306 |
| |
| Base Pair (2464:2486)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
50 |
49 |
41 |
0.83 |
0.96 |
0.98 |
1.95 |
0.98 |
0.99 |
0.02 |
0.05 |
0.00 |
0.78 |
829 |
| 3 |
21 |
20 |
18 |
0.88 |
0.99 |
0.99 |
1.99 |
0.99 |
1.00 |
0.25 |
0.26 |
0.00 |
0.67 |
421 |
| B |
14 |
13 |
12 |
0.89 |
0.99 |
1.00 |
1.99 |
1.00 |
1.00 |
0.80 |
0.81 |
0.00 |
0.74 |
242 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.56 |
0.56 |
0.00 |
1.00 |
41 |
| C |
3 |
3 |
2 |
0.67 |
0.60 |
0.98 |
1.58 |
0.98 |
1.00 |
1.55 |
1.76 |
0.01 |
0.98 |
102 |
| E |
5 |
5 |
4 |
0.80 |
0.98 |
0.99 |
1.97 |
0.99 |
0.99 |
0.65 |
0.67 |
0.00 |
0.53 |
138 |
| M |
26 |
26 |
21 |
0.81 |
0.94 |
0.96 |
1.90 |
0.96 |
0.99 |
-0.15 |
-0.13 |
0.00 |
0.93 |
306 |
| |
| Base Pair (2465:2485)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
29 |
33 |
28 |
0.90 |
0.84 |
0.91 |
1.76 |
0.83 |
1.00 |
0.23 |
0.11 |
0.00 |
0.78 |
829 |
| 3 |
7 |
10 |
7 |
0.82 |
0.72 |
0.87 |
1.59 |
0.69 |
1.00 |
0.77 |
0.54 |
0.00 |
0.67 |
421 |
| B |
6 |
6 |
6 |
1.00 |
0.95 |
1.00 |
1.94 |
1.00 |
1.00 |
1.50 |
1.51 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.40 |
1.40 |
0.00 |
1.00 |
41 |
| C |
6 |
6 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.52 |
1.52 |
0.00 |
0.99 |
102 |
| E |
0 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.07 |
1.00 |
2.00 |
1.65 |
0.00 |
0.53 |
138 |
| M |
16 |
17 |
15 |
0.91 |
0.88 |
0.98 |
1.86 |
0.98 |
0.99 |
0.85 |
0.80 |
0.00 |
0.93 |
306 |
| |
| Base Pair (2466:2484)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
19 |
14 |
0.67 |
0.89 |
0.96 |
1.85 |
0.96 |
0.99 |
0.65 |
0.67 |
0.00 |
0.78 |
829 |
| 3 |
3 |
2 |
2 |
0.80 |
0.91 |
0.99 |
1.90 |
0.99 |
1.00 |
1.35 |
1.32 |
0.00 |
0.67 |
421 |
| B |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
1.96 |
2.00 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.92 |
1.92 |
0.00 |
0.99 |
102 |
| E |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
0.97 |
1.00 |
1.47 |
1.47 |
0.00 |
0.53 |
138 |
| M |
19 |
15 |
11 |
0.65 |
0.80 |
0.92 |
1.72 |
0.92 |
0.97 |
0.42 |
0.47 |
0.00 |
0.93 |
306 |
| |
|
| Base Pair (2470:2480)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
13 |
14 |
7 |
0.52 |
0.35 |
0.96 |
1.30 |
0.96 |
0.99 |
1.60 |
1.45 |
0.00 |
0.78 |
829 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.67 |
421 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
0 |
0.00 |
0.67 |
0.99 |
1.66 |
0.97 |
0.98 |
1.86 |
1.81 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.53 |
138 |
| M |
12 |
13 |
7 |
0.56 |
0.37 |
0.89 |
1.26 |
0.89 |
0.98 |
1.15 |
0.87 |
0.00 |
0.93 |
306 |
| |
| Base Pair (2471:2479)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
6 |
6 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.13 |
1.13 |
0.00 |
0.78 |
829 |
| 3 |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.07 |
1.07 |
0.00 |
0.67 |
421 |
| B |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.79 |
1.75 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.85 |
1.85 |
0.00 |
0.53 |
138 |
| M |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.52 |
1.52 |
0.00 |
0.93 |
306 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)