23S rRNA Model Base Pair Collective Scoring Data for Helical Element 2507
| Base Pair (2507:2582) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.11 |
1.14 |
0.00 |
0.74 |
778 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.97 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.94 |
97 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.36 |
1.32 |
0.00 |
0.84 |
263 |
| |
|
| Base Pair (2508:2580)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
1.91 |
2.00 |
0.00 |
0.74 |
778 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.95 |
2.00 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.94 |
97 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
1.81 |
2.00 |
0.00 |
0.84 |
263 |
| |
| Base Pair (2509:2579)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
16 |
18 |
16 |
0.94 |
0.93 |
0.99 |
1.93 |
0.99 |
1.00 |
1.52 |
1.57 |
0.00 |
0.74 |
779 |
| 3 |
6 |
7 |
6 |
0.92 |
0.89 |
0.99 |
1.88 |
0.99 |
0.99 |
1.72 |
1.71 |
0.00 |
0.66 |
418 |
| B |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.77 |
1.77 |
0.00 |
0.74 |
242 |
| A |
2 |
3 |
2 |
0.80 |
0.80 |
0.98 |
1.78 |
0.98 |
0.98 |
1.54 |
1.38 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.76 |
1.85 |
0.01 |
0.93 |
97 |
| E |
1 |
1 |
1 |
1.00 |
0.75 |
0.99 |
1.74 |
0.99 |
0.99 |
1.81 |
1.85 |
0.00 |
0.51 |
135 |
| M |
9 |
10 |
9 |
0.95 |
0.95 |
0.99 |
1.94 |
0.99 |
1.00 |
1.29 |
1.33 |
0.00 |
0.85 |
264 |
| |
| Base Pair (2510:2578)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
11 |
10 |
5 |
0.48 |
0.89 |
0.97 |
1.85 |
0.97 |
0.99 |
0.95 |
1.09 |
0.00 |
0.74 |
779 |
| 3 |
1 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.96 |
0.99 |
1.79 |
1.94 |
0.00 |
0.66 |
418 |
| B |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.96 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.63 |
0.98 |
1.07 |
1.83 |
0.00 |
1.00 |
41 |
| C |
3 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.95 |
0.99 |
1.76 |
1.92 |
0.00 |
0.95 |
98 |
| E |
0 |
1 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
2.00 |
1.94 |
0.00 |
0.51 |
135 |
| M |
7 |
7 |
5 |
0.71 |
0.93 |
0.98 |
1.92 |
0.98 |
0.99 |
1.20 |
1.22 |
0.00 |
0.84 |
263 |
| |
| Base Pair (2511:2577)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.93 |
2.00 |
0.00 |
0.74 |
778 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.66 |
417 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
241 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.95 |
98 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
0.97 |
1.84 |
2.00 |
0.00 |
0.84 |
263 |
| |
|
| Base Pair (2512:2574) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
15 |
14 |
10 |
0.69 |
0.67 |
0.97 |
1.64 |
0.97 |
0.99 |
1.53 |
1.58 |
0.00 |
0.75 |
781 |
| 3 |
3 |
3 |
3 |
1.00 |
0.40 |
0.99 |
1.39 |
0.99 |
0.99 |
1.92 |
1.79 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.99 |
0.99 |
1.95 |
1.82 |
0.00 |
0.74 |
243 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.46 |
1.46 |
0.00 |
1.00 |
41 |
| C |
5 |
4 |
3 |
0.67 |
0.70 |
0.97 |
1.67 |
0.97 |
1.00 |
1.51 |
1.63 |
0.00 |
0.96 |
99 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.98 |
0.98 |
2.00 |
1.85 |
0.00 |
0.51 |
135 |
| M |
7 |
7 |
4 |
0.57 |
0.72 |
0.95 |
1.67 |
0.95 |
1.00 |
1.24 |
1.37 |
0.00 |
0.85 |
264 |
| |
|
| Base Pair (2513:2571)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
22 |
16 |
0.65 |
0.84 |
0.94 |
1.78 |
0.94 |
0.98 |
0.68 |
0.76 |
0.00 |
0.75 |
788 |
| 3 |
8 |
8 |
7 |
0.88 |
0.93 |
0.96 |
1.90 |
0.96 |
1.00 |
0.42 |
0.49 |
0.00 |
0.66 |
418 |
| B |
7 |
7 |
6 |
0.86 |
0.75 |
0.93 |
1.68 |
0.93 |
1.00 |
1.08 |
1.24 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.34 |
1.34 |
0.00 |
1.00 |
41 |
| C |
10 |
4 |
3 |
0.43 |
0.32 |
0.83 |
1.15 |
0.83 |
0.86 |
0.82 |
1.39 |
0.01 |
0.95 |
99 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
9 |
10 |
6 |
0.63 |
0.42 |
0.95 |
1.36 |
0.95 |
0.99 |
1.56 |
1.63 |
0.00 |
0.87 |
271 |
| |
| Base Pair (2514:2570)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
16 |
17 |
10 |
0.61 |
0.84 |
0.95 |
1.79 |
0.34 |
0.99 |
0.79 |
0.78 |
0.00 |
0.76 |
794 |
| 3 |
4 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.04 |
0.99 |
1.80 |
1.86 |
0.00 |
0.66 |
418 |
| B |
2 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.03 |
0.99 |
1.90 |
1.81 |
0.00 |
0.74 |
242 |
| A |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.24 |
1.00 |
1.20 |
2.00 |
0.00 |
1.00 |
41 |
| C |
2 |
3 |
2 |
0.80 |
0.67 |
0.99 |
1.66 |
0.03 |
1.00 |
1.86 |
1.78 |
0.00 |
0.96 |
99 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.00 |
2.00 |
1.94 |
0.00 |
0.51 |
135 |
| M |
10 |
11 |
8 |
0.76 |
0.72 |
0.92 |
1.65 |
0.89 |
0.99 |
0.81 |
0.70 |
0.00 |
0.89 |
277 |
| |
| Base Pair (2515:2569)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
7 |
6 |
5 |
0.77 |
0.98 |
0.99 |
1.98 |
0.99 |
1.00 |
0.90 |
0.95 |
0.00 |
0.76 |
794 |
| 3 |
1 |
1 |
0 |
0.00 |
0.64 |
0.99 |
1.63 |
0.99 |
1.00 |
1.82 |
1.88 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
0 |
0.00 |
0.64 |
0.90 |
1.54 |
0.90 |
1.00 |
1.16 |
1.34 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.96 |
99 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.51 |
135 |
| M |
6 |
5 |
5 |
0.91 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.07 |
1.04 |
0.00 |
0.89 |
277 |
| |
| Base Pair (2516:2568)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
37 |
35 |
33 |
0.92 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.22 |
0.22 |
0.00 |
0.76 |
793 |
| 3 |
11 |
11 |
10 |
0.91 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.27 |
0.28 |
0.00 |
0.66 |
418 |
| B |
10 |
10 |
10 |
1.00 |
0.98 |
0.99 |
1.97 |
0.99 |
1.00 |
0.64 |
0.63 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
7 |
7 |
7 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.81 |
0.85 |
0.00 |
0.96 |
99 |
| E |
1 |
1 |
0 |
0.00 |
0.50 |
0.98 |
1.49 |
0.98 |
1.00 |
1.77 |
1.89 |
0.00 |
0.51 |
135 |
| M |
19 |
17 |
16 |
0.89 |
0.92 |
0.99 |
1.91 |
0.99 |
0.99 |
1.13 |
1.09 |
0.00 |
0.89 |
276 |
| |
| Base Pair (2517:2567)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
21 |
18 |
13 |
0.67 |
0.89 |
0.97 |
1.87 |
0.97 |
0.97 |
1.01 |
1.04 |
0.00 |
0.76 |
794 |
| 3 |
4 |
4 |
4 |
1.00 |
0.97 |
0.99 |
1.96 |
0.99 |
0.99 |
1.01 |
1.09 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.54 |
1.54 |
0.00 |
1.00 |
41 |
| C |
3 |
2 |
2 |
0.80 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.76 |
1.80 |
0.00 |
0.96 |
99 |
| E |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
0.97 |
0.97 |
1.81 |
1.81 |
0.00 |
0.51 |
135 |
| M |
14 |
12 |
7 |
0.54 |
0.72 |
0.94 |
1.66 |
0.93 |
0.94 |
0.98 |
0.95 |
0.00 |
0.89 |
277 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)