23S rRNA Model Base Pair Collective Scoring Data for Helical Element 2520
| Base Pair (2520:2545)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
5 |
5 |
2 |
0.40 |
0.80 |
0.99 |
1.79 |
0.99 |
0.99 |
1.63 |
1.61 |
0.00 |
0.78 |
822 |
| 3 |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.97 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.92 |
0.00 |
0.51 |
135 |
| M |
5 |
5 |
2 |
0.40 |
0.80 |
0.98 |
1.78 |
0.98 |
0.98 |
1.20 |
1.19 |
0.00 |
0.94 |
302 |
| |
| Base Pair (2521:2544)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
13 |
12 |
9 |
0.72 |
0.64 |
0.92 |
1.56 |
0.92 |
0.93 |
0.95 |
0.87 |
0.00 |
0.78 |
823 |
| 3 |
4 |
6 |
4 |
0.80 |
0.63 |
0.88 |
1.51 |
0.88 |
0.88 |
0.98 |
0.75 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.83 |
1.83 |
0.00 |
1.00 |
41 |
| C |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.81 |
1.81 |
0.00 |
0.99 |
102 |
| E |
3 |
5 |
3 |
0.75 |
0.14 |
0.00 |
0.14 |
0.64 |
0.64 |
1.53 |
0.81 |
0.00 |
0.51 |
135 |
| M |
8 |
5 |
4 |
0.61 |
0.66 |
0.95 |
1.61 |
0.95 |
0.96 |
1.02 |
1.07 |
0.00 |
0.94 |
303 |
| |
|
| Base Pair (2523:2540)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
36 |
32 |
28 |
0.82 |
0.78 |
0.89 |
1.67 |
0.89 |
0.91 |
0.26 |
0.41 |
0.00 |
0.77 |
822 |
| 3 |
7 |
6 |
5 |
0.77 |
0.53 |
0.84 |
1.37 |
0.84 |
0.84 |
0.58 |
0.91 |
0.00 |
0.65 |
418 |
| B |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.65 |
1.58 |
0.01 |
0.73 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.97 |
0.97 |
1.62 |
1.83 |
0.05 |
0.95 |
41 |
| C |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.17 |
1.09 |
0.01 |
0.97 |
102 |
| E |
5 |
4 |
3 |
0.67 |
0.48 |
0.73 |
1.21 |
0.51 |
0.51 |
0.87 |
0.20 |
0.01 |
0.51 |
135 |
| M |
25 |
22 |
19 |
0.81 |
0.84 |
0.93 |
1.77 |
0.93 |
0.99 |
0.29 |
0.39 |
0.00 |
0.94 |
302 |
| |
| Base Pair (2524:2539)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
32 |
26 |
25 |
0.86 |
0.92 |
0.97 |
1.89 |
0.97 |
0.99 |
0.59 |
0.59 |
0.00 |
0.78 |
822 |
| 3 |
5 |
5 |
5 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.50 |
1.52 |
0.00 |
0.66 |
418 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
1.95 |
0.00 |
0.74 |
242 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.34 |
1.34 |
0.00 |
1.00 |
41 |
| C |
1 |
2 |
1 |
0.67 |
0.60 |
0.98 |
1.58 |
0.98 |
1.00 |
1.81 |
1.72 |
0.00 |
0.99 |
102 |
| E |
4 |
4 |
4 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.05 |
1.08 |
0.00 |
0.51 |
135 |
| M |
26 |
19 |
19 |
0.84 |
0.78 |
0.93 |
1.70 |
0.93 |
0.96 |
0.50 |
0.61 |
0.00 |
0.94 |
302 |
| |
| Base Pair (2525:2538)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
47 |
39 |
35 |
0.81 |
0.90 |
0.94 |
1.85 |
0.94 |
0.98 |
0.21 |
0.17 |
0.00 |
0.78 |
823 |
| 3 |
15 |
13 |
11 |
0.79 |
0.90 |
0.96 |
1.86 |
0.96 |
0.99 |
0.42 |
0.44 |
0.00 |
0.66 |
418 |
| B |
2 |
2 |
2 |
1.00 |
0.92 |
1.00 |
1.91 |
1.00 |
1.00 |
1.72 |
1.73 |
0.00 |
0.74 |
242 |
| A |
5 |
4 |
3 |
0.67 |
0.86 |
0.93 |
1.79 |
0.93 |
1.00 |
0.40 |
0.70 |
0.00 |
1.00 |
41 |
| C |
10 |
9 |
9 |
0.95 |
0.81 |
0.92 |
1.73 |
0.92 |
1.00 |
0.95 |
0.82 |
0.01 |
0.98 |
102 |
| E |
8 |
7 |
6 |
0.80 |
0.79 |
0.91 |
1.70 |
0.91 |
0.97 |
0.33 |
0.45 |
0.01 |
0.51 |
135 |
| M |
22 |
17 |
15 |
0.77 |
0.74 |
0.93 |
1.66 |
0.93 |
0.96 |
0.57 |
0.65 |
0.00 |
0.95 |
303 |
| |
| Base Pair (2526:2537)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
25 |
21 |
12 |
0.52 |
0.17 |
0.00 |
0.17 |
0.25 |
0.97 |
1.28 |
0.94 |
0.00 |
0.78 |
825 |
| 3 |
9 |
10 |
8 |
0.84 |
0.18 |
0.00 |
0.18 |
0.41 |
0.99 |
1.35 |
0.71 |
0.01 |
0.66 |
420 |
| B |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.88 |
2.00 |
0.01 |
0.73 |
242 |
| A |
6 |
6 |
6 |
1.00 |
0.96 |
0.98 |
1.94 |
0.98 |
1.00 |
0.33 |
0.26 |
0.00 |
1.00 |
41 |
| C |
2 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.87 |
1.45 |
2.00 |
0.00 |
0.99 |
102 |
| E |
3 |
4 |
2 |
0.57 |
0.62 |
0.96 |
1.58 |
0.96 |
0.96 |
1.40 |
1.50 |
0.00 |
0.52 |
137 |
| M |
14 |
11 |
4 |
0.32 |
0.15 |
0.00 |
0.15 |
0.11 |
0.98 |
1.30 |
1.35 |
0.00 |
0.95 |
303 |
| |
| Base Pair (2527:2536)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
22 |
16 |
0.65 |
0.91 |
0.95 |
1.86 |
0.95 |
0.97 |
0.29 |
0.29 |
0.00 |
0.78 |
826 |
| 3 |
9 |
6 |
5 |
0.67 |
0.91 |
0.96 |
1.88 |
0.96 |
0.98 |
0.65 |
0.64 |
0.00 |
0.67 |
421 |
| B |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.96 |
1.96 |
0.00 |
0.74 |
242 |
| A |
3 |
3 |
3 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.20 |
1.20 |
0.00 |
1.00 |
41 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
2.00 |
2.00 |
0.00 |
0.99 |
102 |
| E |
5 |
2 |
1 |
0.29 |
0.47 |
0.94 |
1.41 |
0.89 |
0.93 |
1.27 |
1.54 |
0.00 |
0.53 |
138 |
| M |
18 |
16 |
11 |
0.65 |
0.59 |
0.91 |
1.50 |
0.91 |
0.97 |
0.79 |
0.71 |
0.00 |
0.93 |
303 |
| |
| Base Pair (2528:2535)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
23 |
24 |
13 |
0.55 |
0.67 |
0.90 |
1.58 |
0.27 |
0.97 |
0.68 |
0.76 |
0.00 |
0.78 |
826 |
| 3 |
7 |
5 |
4 |
0.67 |
0.74 |
0.92 |
1.66 |
0.30 |
0.99 |
0.85 |
1.14 |
0.00 |
0.67 |
421 |
| B |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
0.00 |
1.00 |
1.96 |
1.92 |
0.00 |
0.74 |
242 |
| A |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
2.00 |
2.00 |
0.00 |
1.00 |
41 |
| C |
9 |
10 |
8 |
0.84 |
0.81 |
0.93 |
1.74 |
0.65 |
0.95 |
0.87 |
0.77 |
0.01 |
0.98 |
102 |
| E |
6 |
4 |
3 |
0.60 |
0.71 |
0.91 |
1.63 |
0.91 |
0.97 |
0.90 |
1.05 |
0.00 |
0.53 |
138 |
| M |
7 |
9 |
1 |
0.12 |
0.03 |
0.00 |
0.03 |
0.09 |
0.96 |
1.38 |
1.24 |
0.01 |
0.94 |
303 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)