23S rRNA Model Base Pair Collective Scoring Data for Helical Element 375
| Base Pair (375:399)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
30 |
28 |
14 |
0.48 |
0.35 |
0.67 |
1.02 |
0.49 |
0.99 |
-0.11 |
-0.40 |
0.00 |
0.65 |
893 |
| 3 |
21 |
22 |
11 |
0.51 |
0.37 |
0.65 |
1.02 |
0.54 |
0.99 |
1.05 |
0.44 |
0.00 |
0.85 |
538 |
| B |
13 |
10 |
7 |
0.61 |
0.83 |
0.94 |
1.78 |
0.34 |
1.00 |
0.89 |
0.92 |
0.00 |
0.86 |
280 |
| A |
3 |
2 |
1 |
0.40 |
0.46 |
0.81 |
1.27 |
0.78 |
0.95 |
0.85 |
0.73 |
0.00 |
0.90 |
37 |
| C |
3 |
1 |
1 |
0.50 |
0.17 |
0.00 |
0.17 |
0.06 |
1.00 |
1.63 |
1.92 |
0.00 |
0.97 |
100 |
| E |
5 |
10 |
3 |
0.40 |
0.10 |
0.00 |
0.10 |
0.76 |
0.99 |
1.74 |
1.04 |
0.00 |
0.84 |
221 |
| M |
6 |
5 |
2 |
0.36 |
0.50 |
0.82 |
1.32 |
0.82 |
0.97 |
-0.52 |
-0.50 |
0.00 |
0.12 |
255 |
| |
| Base Pair (376:398)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
35 |
39 |
27 |
0.73 |
0.83 |
0.90 |
1.73 |
0.90 |
1.00 |
-0.54 |
-0.59 |
0.00 |
0.65 |
894 |
| 3 |
23 |
27 |
15 |
0.60 |
0.74 |
0.88 |
1.62 |
0.88 |
1.00 |
0.51 |
0.41 |
0.00 |
0.85 |
539 |
| B |
10 |
16 |
7 |
0.54 |
0.66 |
0.89 |
1.55 |
0.89 |
1.00 |
1.07 |
0.77 |
0.00 |
0.86 |
281 |
| A |
1 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.95 |
1.00 |
1.70 |
2.00 |
0.00 |
0.90 |
37 |
| C |
6 |
6 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.43 |
1.43 |
0.00 |
0.97 |
100 |
| E |
12 |
11 |
8 |
0.70 |
0.74 |
0.85 |
1.59 |
0.85 |
0.99 |
0.27 |
0.25 |
0.00 |
0.84 |
221 |
| M |
6 |
6 |
6 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
-0.51 |
-0.51 |
0.00 |
0.12 |
255 |
| |
| Base Pair (377:397)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
33 |
28 |
20 |
0.66 |
0.54 |
0.70 |
1.24 |
0.70 |
1.00 |
-0.24 |
-0.20 |
0.00 |
0.65 |
894 |
| 3 |
27 |
22 |
15 |
0.61 |
0.40 |
0.63 |
1.03 |
0.63 |
1.00 |
0.95 |
0.78 |
0.00 |
0.85 |
539 |
| B |
15 |
11 |
6 |
0.46 |
0.15 |
0.00 |
0.15 |
0.35 |
1.00 |
0.80 |
1.46 |
0.00 |
0.86 |
281 |
| A |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.60 |
0.60 |
0.00 |
0.90 |
37 |
| C |
3 |
2 |
2 |
0.80 |
0.71 |
0.98 |
1.69 |
0.98 |
0.98 |
1.57 |
1.67 |
0.00 |
0.97 |
100 |
| E |
10 |
9 |
7 |
0.74 |
0.60 |
0.92 |
1.53 |
0.92 |
0.99 |
1.34 |
1.18 |
0.00 |
0.84 |
221 |
| M |
3 |
4 |
3 |
0.86 |
0.80 |
0.95 |
1.75 |
0.95 |
1.00 |
-0.49 |
-0.46 |
0.00 |
0.12 |
255 |
| |
| Base Pair (378:396)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
25 |
15 |
11 |
0.55 |
0.10 |
0.00 |
0.10 |
0.55 |
0.99 |
-0.24 |
0.36 |
0.00 |
0.65 |
893 |
| 3 |
14 |
8 |
4 |
0.36 |
0.09 |
0.00 |
0.09 |
0.63 |
1.00 |
0.83 |
1.64 |
0.00 |
0.85 |
538 |
| B |
3 |
1 |
1 |
0.50 |
0.82 |
0.99 |
1.81 |
0.99 |
1.00 |
1.74 |
1.79 |
0.00 |
0.86 |
280 |
| A |
4 |
2 |
2 |
0.67 |
0.37 |
0.68 |
1.04 |
0.32 |
1.00 |
0.49 |
1.01 |
0.00 |
0.90 |
37 |
| C |
3 |
1 |
1 |
0.50 |
0.33 |
0.94 |
1.27 |
0.07 |
0.98 |
1.47 |
1.81 |
0.00 |
0.97 |
100 |
| E |
7 |
5 |
1 |
0.17 |
0.04 |
0.00 |
0.04 |
0.23 |
0.99 |
1.22 |
1.71 |
0.00 |
0.84 |
221 |
| M |
8 |
6 |
6 |
0.86 |
0.40 |
0.60 |
1.00 |
0.60 |
0.87 |
-0.54 |
-0.51 |
0.00 |
0.12 |
255 |
| |
| Base Pair (379:395)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
22 |
25 |
15 |
0.64 |
0.63 |
0.76 |
1.39 |
0.76 |
0.99 |
-0.42 |
-0.66 |
0.00 |
0.64 |
890 |
| 3 |
14 |
18 |
8 |
0.50 |
0.55 |
0.75 |
1.30 |
0.74 |
0.98 |
0.45 |
0.24 |
0.00 |
0.85 |
535 |
| B |
6 |
11 |
2 |
0.23 |
0.48 |
0.72 |
1.20 |
0.53 |
0.98 |
0.84 |
0.21 |
0.00 |
0.86 |
280 |
| A |
3 |
3 |
3 |
1.00 |
0.87 |
0.95 |
1.81 |
0.95 |
1.00 |
0.80 |
1.03 |
0.00 |
0.90 |
37 |
| C |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.61 |
1.61 |
0.00 |
0.97 |
100 |
| E |
5 |
4 |
3 |
0.67 |
0.84 |
0.98 |
1.82 |
0.98 |
0.99 |
1.37 |
1.35 |
0.00 |
0.83 |
218 |
| M |
6 |
5 |
5 |
0.91 |
0.40 |
0.68 |
1.08 |
0.49 |
1.00 |
-0.52 |
-0.54 |
0.00 |
0.12 |
255 |
| |
| Base Pair (380:394)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
27 |
31 |
18 |
0.62 |
0.84 |
0.96 |
1.80 |
0.96 |
1.00 |
-0.13 |
-0.18 |
0.00 |
0.64 |
892 |
| 3 |
21 |
25 |
13 |
0.56 |
0.82 |
0.95 |
1.77 |
0.95 |
1.00 |
0.92 |
0.83 |
0.00 |
0.85 |
537 |
| B |
10 |
13 |
5 |
0.43 |
0.79 |
0.93 |
1.72 |
0.93 |
1.00 |
1.09 |
1.00 |
0.00 |
0.86 |
281 |
| A |
3 |
4 |
2 |
0.57 |
0.90 |
0.95 |
1.84 |
0.95 |
1.00 |
1.00 |
0.75 |
0.00 |
0.90 |
37 |
| C |
2 |
2 |
2 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.76 |
1.76 |
0.00 |
0.97 |
100 |
| E |
8 |
8 |
6 |
0.75 |
0.86 |
0.98 |
1.84 |
0.98 |
0.99 |
1.18 |
1.15 |
0.00 |
0.83 |
219 |
| M |
4 |
4 |
3 |
0.75 |
0.91 |
0.94 |
1.85 |
0.94 |
1.00 |
-0.57 |
-0.56 |
0.00 |
0.11 |
255 |
| |
| Base Pair (381:393)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
35 |
24 |
19 |
0.64 |
0.69 |
0.84 |
1.53 |
0.79 |
0.99 |
-0.63 |
-0.48 |
0.00 |
0.64 |
893 |
| 3 |
28 |
17 |
14 |
0.62 |
0.69 |
0.82 |
1.51 |
0.74 |
1.00 |
0.16 |
0.46 |
0.00 |
0.85 |
538 |
| B |
10 |
10 |
10 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
1.20 |
1.21 |
0.00 |
0.86 |
280 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
1.00 |
1.00 |
0.68 |
0.68 |
0.00 |
0.90 |
37 |
| C |
4 |
4 |
4 |
1.00 |
0.90 |
0.99 |
1.89 |
0.99 |
0.99 |
1.52 |
1.36 |
0.01 |
0.96 |
100 |
| E |
17 |
6 |
3 |
0.26 |
0.14 |
0.00 |
0.14 |
0.38 |
0.99 |
0.82 |
1.44 |
0.00 |
0.84 |
221 |
| M |
3 |
3 |
1 |
0.33 |
0.84 |
0.91 |
1.75 |
0.91 |
0.94 |
-0.50 |
-0.50 |
0.00 |
0.10 |
255 |
| |
| Base Pair (382:392)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
28 |
18 |
7 |
0.30 |
0.17 |
0.00 |
0.17 |
0.37 |
0.52 |
-0.54 |
0.05 |
0.00 |
0.64 |
894 |
| 3 |
14 |
14 |
5 |
0.36 |
0.24 |
0.59 |
0.82 |
0.35 |
0.43 |
0.48 |
1.21 |
0.00 |
0.85 |
539 |
| B |
12 |
11 |
4 |
0.35 |
0.20 |
0.65 |
0.85 |
0.65 |
0.79 |
1.19 |
1.07 |
0.00 |
0.86 |
281 |
| A |
1 |
1 |
1 |
1.00 |
1.00 |
1.00 |
2.00 |
0.22 |
0.22 |
1.25 |
1.25 |
0.00 |
0.90 |
37 |
| C |
10 |
0 |
0 |
0.00 |
0.05 |
0.00 |
0.05 |
0.40 |
0.98 |
0.93 |
1.76 |
0.00 |
0.96 |
100 |
| E |
1 |
2 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
1.93 |
1.87 |
0.00 |
0.84 |
221 |
| M |
4 |
4 |
2 |
0.50 |
0.32 |
0.48 |
0.80 |
0.48 |
0.69 |
-0.47 |
-0.44 |
0.00 |
0.09 |
255 |
| |
| Base Pair (383:391) (Tertiary)
| Frequencies |
| Aln
| Xch
| Ych
| PE
| PES
| Cov1
| Cov3
| C1+C3
| WC
| WCGU
| XCons
| YCons
| DfDel
| PNuc
| Seq
|
|---|
| T |
5 |
18 |
2 |
0.17 |
0.27 |
0.97 |
1.24 |
0.01 |
0.02 |
-0.28 |
-0.04 |
0.26 |
0.37 |
894 |
| 3 |
3 |
15 |
2 |
0.22 |
0.67 |
0.99 |
1.66 |
0.01 |
0.02 |
-0.07 |
0.86 |
0.40 |
0.44 |
539 |
| B |
3 |
2 |
1 |
0.40 |
0.80 |
1.00 |
1.80 |
0.00 |
0.02 |
1.78 |
1.74 |
0.01 |
0.85 |
281 |
| A |
0 |
3 |
1 |
0.67 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.00 |
0.51 |
0.90 |
0.00 |
37 |
| C |
0 |
0 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.01 |
0.01 |
1.82 |
1.75 |
0.02 |
0.94 |
100 |
| E |
0 |
10 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
1.00 |
1.00 |
-0.03 |
0.46 |
0.84 |
0.00 |
221 |
| M |
2 |
3 |
0 |
0.00 |
0.00 |
0.00 |
0.00 |
0.18 |
0.18 |
-0.30 |
-0.40 |
0.06 |
0.04 |
255 |
| |
Last generated : Mon Jul 2 2001 (16 : 9)