Group IIB Intron RNA Base Pair Frequencies for Helical Element 1


Base Pair (1:259)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 0.3* -- -- -- -- -- 0.5* -- -- -- -- -- -- -- -- 0.2* 98.9573
 
Base Pair (2:258)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 0.5 0.5* 10.0* 0.5 2.7* 1.8 0.9 2.3* 2.3 2.7 -- 0.9 3.2 0.9 -- -- 70.9219
 
Base Pair (3:257)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 2.2 2.2 10.1 1.4 7.2* 10.8* 1.4 -- 7.9 2.2* 2.2 0.7 -- -- 2.9 7.2 41.7139
 
Base Pair (4:256)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 19.6* 3.6* 33.0* 1.8* 5.4 1.8 1.8 -- 0.9 8.0 -- -- 0.9 1.8 -- 3.6 17.8112
 
Base Pair (5:255)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 26.8* 11.6* 14.3* 10.7* 6.2 -- -- 2.7 -- 1.8 2.7 0.9 0.9 3.6 5.4 0.9 11.7112
 
Base Pair (6:254)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 15.2* 8.9* 28.6* 9.8* 4.5 0.9 1.8 -- 8.9 -- 0.9 -- 1.8 -- -- 3.6 15.2112
 

Last generated : Thu Oct 5 2000 (16 : 12)