Group IIB Intron RNA Base Pair Frequencies for Helical Element 447

Base Pair (447:479)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T -- 0.2 1.6 0.7 -- 0.7 20.6* -- 0.2 6.8 0.2 2.1* -- 0.3* 0.9* 0.2 65.5572
Base Pair (448:478)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T -- 0.3 26.0* 1.9* -- 0.3 -- 0.2 -- 0.9 -- 0.2 0.3 0.7* 1.4 1.7 65.9572
 
Base Pair (449:477)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 0.3 0.2 0.9* 2.1* 0.7 0.2 0.9 0.2 0.5 -- 0.2* 0.3 1.2 25.3* -- 0.9 66.1573
 
Base Pair (450:476)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 0.9* -- 18.5* 0.7* 0.2 0.7 0.3 0.3 -- 0.2 0.3 -- 0.7 0.5 0.5 2.4 73.6573
 
Base Pair (451:475)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T -- 0.2 12.7* 1.9* -- 1.4 2.1 0.5 0.7 -- -- -- 1.0 0.5* 4.2 0.5 74.1573
 
Base Pair (452:474)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T -- -- 1.4 0.9* -- 1.6* 0.5 0.3 0.3 0.2 0.2* -- 0.7* 0.2 0.2 1.2 92.4573
 
Base Pair (453:473)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 0.5 -- 0.5 0.5 0.7 0.2 0.9* 0.3 0.5 0.2 -- -- -- 1.0* 0.7 2.1* 91.7572
 
Base Pair (454:472)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 0.9* 0.3 0.2 1.2* 0.2 1.0* 0.7 0.3 0.9 0.2* -- 0.7 0.3 -- 0.9 0.9 91.3572
 
Base Pair (455:471)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T 0.9 -- 0.7 2.6 -- 0.5 1.6 11.7* 0.9 0.2* 0.4 0.5 -- 0.4* 3.9 1.6* 74.3571
 
Base Pair (456:470)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T -- -- 1.4* 12.8* 0.4 -- 0.7 0.4 8.6 -- -- 0.2 -- -- 0.4 1.8 73.7571
 
Base Pair (457:469)
Aln GC CG UA AU GU UG AA AC AG CA CC CU GA GG UC UU gap Seq
T -- 0.2 0.9 1.2 1.9* 0.2 0.4 4.0 -- 1.1* 0.9 0.2 0.2 -- 31.7* 2.8 54.6571
 
Last generated : Thu Oct 5 2000 (16 : 12)