16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (7/27)
| Triple (287:303)300 |
|---|
| Aln |
AUG |
GCA |
GCG |
GCU |
GUG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
6.2 |
1.4 |
*70.1 |
0.7 |
7.1 |
13.4 |
1.1 |
23 |
-- |
-- |
0.81/0.72/1.09 |
7297 |
| 3 |
7.5 |
1.5 |
80.2 |
0.8 |
8.6 |
0.4 |
1.1 |
19 |
-- |
-- |
1.55/1.33/1.75 |
6082 |
| B |
0.2 |
1.6 |
96.7 |
0.7 |
0.1 |
0.1 |
0.6 |
13 |
-- |
-- |
1.93/1.95/1.80 |
4828 |
| A |
-- |
6.1 |
88.2 |
5.2 |
-- |
-- |
0.4 |
4 |
-- |
-- |
2.00/2.00/1.34 |
229 |
| C |
-- |
2.4 |
96.4 |
0.6 |
-- |
-- |
0.6 |
4 |
-- |
-- |
1.95/2.00/1.79 |
169 |
| E |
43.2 |
-- |
0.4 |
0.1 |
50.4 |
1.9 |
4.0 |
12 |
-- |
-- |
0.87/1.75/1.70 |
1026 |
| M |
-- |
0.6 |
*7.4 |
-- |
-- |
91.3 |
0.7 |
7 |
0.88 |
-- |
-0.31/-0.37/-0.38 |
1047 |
| Triple (287:303)591 |
|---|
| Aln |
GCA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
68.7 |
30.6 |
0.7 |
13 |
-- |
-- |
0.81/0.72/0.57 |
6767 |
| 3 |
80.4 |
18.9 |
0.7 |
13 |
-- |
-- |
1.55/1.33/0.99 |
5528 |
| B |
99.1 |
0.1 |
0.8 |
12 |
-- |
-- |
1.93/1.95/1.98 |
4279 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
207 |
| C |
98.8 |
0.6 |
0.6 |
2 |
-- |
-- |
1.95/2.00/1.81 |
164 |
| E |
0.1 |
99.8 |
0.1 |
2 |
-- |
-- |
0.87/1.75/-0.02 |
1042 |
| M |
3.7 |
95.4 |
0.8 |
5 |
-- |
-- |
-0.31/-0.37/-0.22 |
1076 |
| Triple (292:295)548 |
|---|
| Aln |
AGU |
CGU |
CUU |
GAU |
GUU |
UAU |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.9 |
3.0 |
0.3 |
*69.5 |
2.6 |
0.7 |
7.2 |
14.0 |
1.6 |
26 |
-- |
-- |
0.54/1.08/1.38 |
6771 |
| 3 |
1.1 |
3.7 |
0.4 |
80.8 |
3.2 |
0.8 |
8.8 |
0.2 |
1.0 |
16 |
-- |
-- |
1.23/1.23/1.97 |
5562 |
| B |
-- |
-- |
-- |
98.5 |
-- |
0.5 |
-- |
0.3 |
0.7 |
9 |
-- |
-- |
1.87/1.97/1.97 |
4350 |
| A |
-- |
-- |
-- |
99.5 |
-- |
-- |
-- |
-- |
0.5 |
2 |
-- |
-- |
2.00/2.00/1.96 |
208 |
| C |
-- |
-- |
-- |
96.3 |
-- |
0.6 |
-- |
1.2 |
1.8 |
5 |
-- |
-- |
1.86/1.95/1.83 |
163 |
| E |
6.1 |
20.5 |
2.2 |
0.2 |
17.7 |
2.5 |
48.6 |
0.1 |
2.1 |
12 |
-- |
-- |
0.34/1.00/1.99 |
1004 |
| M |
0.1 |
-- |
-- |
*5.4 |
-- |
0.2 |
-- |
89.1 |
5.2 |
19 |
0.54 |
-- |
-0.48/0.45/-0.09 |
1047 |
| Triple (313:330)1415 |
|---|
| Aln |
AUA |
GAA |
GCA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.1 |
15.8 |
*64.2 |
18.4 |
1.4 |
20 |
-- |
-- |
1.19/0.61/1.05 |
5860 |
| 3 |
-- |
20.1 |
*77.8 |
0.4 |
1.8 |
18 |
-- |
-- |
1.96/1.29/1.87 |
4603 |
| B |
-- |
-- |
98.8 |
0.3 |
0.9 |
11 |
-- |
-- |
1.96/1.92/1.97 |
3436 |
| A |
-- |
-- |
97.7 |
2.3 |
-- |
1 |
-- |
-- |
2.00/2.00/1.80 |
174 |
| C |
2.0 |
-- |
97.3 |
-- |
0.7 |
3 |
-- |
-- |
1.87/1.87/1.95 |
148 |
| E |
-- |
*93.1 |
1.5 |
0.4 |
5.0 |
12 |
-- |
-- |
1.93/1.78/1.64 |
993 |
| M |
0.1 |
-- |
*4.1 |
95.7 |
0.2 |
4 |
0.96 |
-- |
-0.39/-0.33/-0.22 |
1110 |
Last modified on 01 November 2002.