16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (9/27)
| Triple (370:384)367 |
|---|
| Aln |
UAA |
UAC |
UAU |
UUC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.4 |
*97.1 |
0.9 |
0.1 |
1.1 |
0.4 |
18 |
-- |
-- |
1.94/1.94/1.77 |
7237 |
| 3 |
-- |
*99.0 |
0.3 |
0.1 |
0.2 |
0.4 |
12 |
-- |
-- |
1.96/1.96/1.94 |
6208 |
| B |
-- |
99.4 |
0.1 |
-- |
0.1 |
0.3 |
9 |
-- |
-- |
1.97/1.97/1.97 |
4952 |
| A |
-- |
95.7 |
-- |
2.2 |
2.2 |
-- |
2 |
-- |
-- |
1.81/1.85/1.87 |
230 |
| C |
-- |
100.0 |
-- |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
167 |
| E |
-- |
*97.7 |
1.2 |
-- |
0.3 |
0.9 |
8 |
-- |
-- |
1.93/1.95/1.84 |
1027 |
| M |
2.8 |
*83.1 |
5.7 |
-- |
7.4 |
1.0 |
11 |
-- |
-- |
1.82/1.81/0.97 |
863 |
| Triple (400:482)529 |
|---|
| Aln |
GAU |
UAA |
UAG |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.4 |
*39.8 |
25.0 |
21.3 |
12.3 |
1.2 |
16 |
-- |
-- |
1.24/1.28/0.41 |
6076 |
| 3 |
-- |
43.9 |
29.6 |
25.3 |
0.3 |
1.0 |
10 |
-- |
-- |
1.97/1.97/0.40 |
5089 |
| B |
-- |
50.7 |
34.1 |
14.0 |
0.3 |
1.0 |
8 |
-- |
-- |
1.99/1.96/0.50 |
3880 |
| A |
-- |
28.6 |
69.0 |
1.0 |
0.5 |
1.0 |
5 |
-- |
-- |
1.91/1.96/1.05 |
203 |
| C |
-- |
95.7 |
4.3 |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.75 |
162 |
| E |
-- |
20.9 |
4.3 |
73.6 |
0.3 |
1.0 |
6 |
-- |
-- |
1.93/1.97/0.93 |
1006 |
| M |
3.1 |
*4.0 |
0.7 |
0.7 |
88.9 |
2.5 |
10 |
0.40 |
-- |
-0.88/-0.33/0.73 |
826 |
| Triple (406:425)409 |
|---|
| Aln |
AAA |
AAU |
UAA |
UCA |
UGA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*68.6 |
0.5 |
0.4 |
0.1 |
0.4 |
28.3 |
1.7 |
26 |
-- |
-- |
0.49/0.46/0.47 |
7141 |
| 3 |
*77.4 |
0.1 |
0.2 |
-- |
-- |
20.8 |
1.5 |
14 |
-- |
-- |
0.83/0.79/0.76 |
6150 |
| B |
*97.5 |
0.2 |
0.2 |
-- |
-- |
0.2 |
1.9 |
14 |
-- |
-- |
1.94/1.90/1.86 |
4883 |
| A |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.00/0.00/0.00 |
237 |
| C |
65.1 |
0.6 |
10.2 |
2.4 |
17.5 |
0.6 |
3.6 |
8 |
-- |
-- |
0.88/1.09/1.83 |
166 |
| E |
0.2 |
-- |
-- |
-- |
-- |
99.8 |
-- |
1 |
-- |
-- |
-0.02/-0.02/-0.02 |
1031 |
| M |
*4.1 |
2.9 |
0.1 |
-- |
-- |
89.7 |
3.1 |
16 |
0.42 |
-- |
-0.39/-0.40/-0.42 |
826 |
| Triple (410:423)408 |
|---|
| Aln |
AGG |
AGU |
CGG |
GCG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*55.1 |
0.2 |
15.6 |
0.3 |
27.9 |
0.8 |
28 |
-- |
-- |
-0.01/0.51/0.52 |
7246 |
| 3 |
61.5 |
0.2 |
17.6 |
-- |
20.4 |
0.4 |
14 |
-- |
-- |
0.25/0.85/0.83 |
6254 |
| B |
77.1 |
0.2 |
22.0 |
-- |
0.2 |
0.4 |
14 |
-- |
-- |
1.21/1.96/1.95 |
4987 |
| A |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.00/0.00/0.00 |
237 |
| C |
71.9 |
3.0 |
18.0 |
-- |
0.6 |
6.6 |
9 |
-- |
-- |
1.05/1.61/1.55 |
167 |
| E |
0.2 |
-- |
-- |
-- |
99.8 |
-- |
1 |
-- |
-- |
-0.02/-0.02/-0.02 |
1031 |
| M |
*3.9 |
-- |
0.5 |
2.8 |
89.8 |
3.0 |
14 |
0.54 |
-- |
-0.47/-0.47/-0.41 |
826 |
Last modified on 01 November 2002.