16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (10/27)
| Triple (442:470)469 |
|---|
| Aln |
AGU |
AUG |
AUU |
GGG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.2 |
*51.5 |
14.2 |
0.4 |
29.5 |
3.2 |
32 |
-- |
-- |
0.41/0.29/-0.06 |
7009 |
| 3 |
1.2 |
*57.6 |
16.3 |
0.1 |
21.4 |
3.3 |
24 |
-- |
-- |
0.72/0.60/0.17 |
6019 |
| B |
1.6 |
*72.9 |
20.7 |
0.2 |
0.4 |
4.2 |
24 |
-- |
-- |
1.83/1.68/1.12 |
4752 |
| A |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.00/0.00/0.00 |
237 |
| C |
4.8 |
*83.0 |
6.7 |
-- |
1.8 |
3.6 |
8 |
0.86 |
-- |
1.77/1.58/1.17 |
165 |
| E |
-- |
-- |
0.1 |
-- |
99.9 |
-- |
1 |
-- |
-- |
-0.01/-0.01/-0.02 |
1030 |
| M |
-- |
0.7 |
0.4 |
*2.1 |
94.2 |
2.7 |
16 |
0.58 |
0.58 |
-0.32/-0.39/-0.31 |
826 |
| Triple (481:530)399 |
|---|
| Aln |
AAG |
CAG |
GAG |
UAA |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
12.2 |
1.0 |
*35.4 |
0.5 |
20.9 |
27.8 |
2.2 |
20 |
-- |
-- |
-0.49/1.89/0.73 |
6610 |
| 3 |
14.2 |
1.1 |
41.1 |
0.1 |
21.8 |
19.6 |
2.2 |
17 |
-- |
-- |
-0.30/1.92/1.29 |
5623 |
| B |
17.9 |
0.6 |
52.6 |
-- |
24.5 |
1.8 |
2.7 |
15 |
-- |
-- |
0.41/1.91/1.84 |
4388 |
| A |
7.3 |
18.0 |
0.5 |
-- |
74.1 |
-- |
-- |
4 |
-- |
-- |
0.90/2.00/2.00 |
205 |
| C |
0.6 |
-- |
1.9 |
0.6 |
93.8 |
1.2 |
1.9 |
6 |
-- |
-- |
1.64/1.94/1.82 |
162 |
| E |
-- |
-- |
0.1 |
0.3 |
-- |
99.3 |
0.3 |
3 |
-- |
-- |
-0.05/1.91/1.66 |
1030 |
| M |
0.5 |
0.1 |
*3.8 |
3.6 |
0.2 |
88.9 |
2.9 |
12 |
0.35 |
-- |
-0.48/1.77/-0.86 |
826 |
| Triple (485:526)492 |
|---|
| Aln |
AUA |
CGA |
GCA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*37.5 |
25.9 |
33.2 |
1.8 |
0.3 |
1.3 |
26 |
-- |
-- |
0.30/0.31/1.93 |
6460 |
| 3 |
*40.8 |
29.0 |
26.8 |
1.8 |
0.3 |
1.4 |
22 |
-- |
-- |
0.32/0.33/1.93 |
5477 |
| B |
*47.8 |
37.0 |
11.0 |
2.2 |
0.3 |
1.6 |
21 |
-- |
-- |
0.46/0.47/1.92 |
4274 |
| A |
6.9 |
-- |
91.6 |
-- |
-- |
1.5 |
3 |
-- |
-- |
1.64/1.65/1.89 |
203 |
| C |
94.4 |
1.9 |
-- |
3.7 |
-- |
-- |
3 |
-- |
-- |
1.64/1.65/2.00 |
162 |
| E |
18.0 |
0.6 |
81.0 |
-- |
0.1 |
0.3 |
4 |
-- |
-- |
1.26/1.24/2.00 |
1000 |
| M |
4.3 |
10.0 |
*82.4 |
1.7 |
0.4 |
1.3 |
12 |
-- |
-- |
1.10/1.13/1.94 |
822 |
Last modified on 01 November 2002.