16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (12/27)
| Triple (553:843)840 |
|---|
| Aln |
AGU |
CGG |
GCA |
GCC |
GCG |
GCU |
UAA |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.1 |
2.6 |
5.6 |
4.3 |
0.7 |
*64.5 |
0.3 |
*19.6 |
1.1 |
1.2 |
30 |
0.85 |
0.85 |
1.03/1.01/0.53 |
6748 |
| 3 |
-- |
3.0 |
4.3 |
1.5 |
0.4 |
*66.8 |
0.3 |
*22.5 |
0.7 |
0.4 |
16 |
0.90 |
0.90 |
1.02/1.03/0.76 |
5706 |
| B |
-- |
-- |
5.5 |
1.9 |
0.6 |
*85.2 |
0.2 |
*5.3 |
0.8 |
0.4 |
14 |
0.91 |
0.91 |
1.64/1.67/1.16 |
4474 |
| A |
-- |
*79.0 |
-- |
-- |
-- |
-- |
*2.7 |
16.0 |
2.3 |
-- |
3 |
0.84 |
-- |
1.33/1.32/1.63 |
219 |
| C |
4.2 |
-- |
0.6 |
0.6 |
-- |
91.6 |
-- |
-- |
1.2 |
1.8 |
5 |
-- |
-- |
1.68/1.51/1.78 |
166 |
| E |
-- |
-- |
-- |
-- |
-- |
*0.1 |
-- |
*99.5 |
-- |
0.4 |
4 |
-- |
-- |
1.99/1.98/1.96 |
1013 |
| M |
-- |
0.3 |
14.9 |
23.0 |
2.7 |
*44.4 |
0.3 |
*4.8 |
3.5 |
5.9 |
24 |
0.53 |
-- |
1.30/1.13/0.03 |
877 |
| Triple (558:857)559 |
|---|
| Aln |
ACC |
AUA |
AUC |
GCA |
GCC |
GCG |
GCU |
GUG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.5 |
*9.7 |
5.9 |
18.4 |
*34.5 |
27.8 |
0.7 |
0.5 |
0.6 |
1.6 |
35 |
0.44 |
-- |
1.29/1.26/0.34 |
6638 |
| 3 |
-- |
*11.3 |
6.2 |
17.0 |
*34.5 |
29.2 |
0.1 |
0.6 |
0.4 |
0.7 |
23 |
0.46 |
-- |
1.31/1.27/0.40 |
5596 |
| B |
-- |
-- |
0.4 |
21.7 |
*39.8 |
36.8 |
0.1 |
-- |
0.6 |
0.6 |
19 |
-- |
-- |
1.91/1.88/0.43 |
4375 |
| A |
-- |
-- |
2.8 |
-- |
85.2 |
12.0 |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
1.81/1.82/1.47 |
216 |
| C |
-- |
-- |
-- |
10.8 |
*77.7 |
3.6 |
4.8 |
-- |
1.8 |
1.2 |
6 |
0.80 |
-- |
1.91/1.79/0.91 |
166 |
| E |
-- |
*62.6 |
32.3 |
0.3 |
*0.4 |
-- |
-- |
3.0 |
-- |
1.4 |
10 |
-- |
-- |
1.77/1.90/0.85 |
1005 |
| M |
3.3 |
1.8 |
*4.7 |
*28.5 |
26.8 |
23.0 |
3.8 |
-- |
1.1 |
7.0 |
26 |
0.34 |
-- |
1.18/1.30/0.11 |
877 |
| Triple (560:747)712 |
|---|
| Aln |
AUA |
GCA |
GCC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.9 |
*96.4 |
0.3 |
0.3 |
1.1 |
23 |
-- |
-- |
1.80/1.79/1.90 |
6944 |
| 3 |
1.7 |
97.6 |
-- |
0.2 |
0.6 |
12 |
-- |
-- |
1.85/1.84/1.98 |
5903 |
| B |
1.7 |
97.6 |
-- |
0.3 |
0.5 |
12 |
-- |
-- |
1.84/1.84/1.99 |
4663 |
| A |
8.2 |
90.9 |
-- |
-- |
0.9 |
4 |
-- |
-- |
1.52/1.56/2.00 |
220 |
| C |
1.8 |
97.0 |
-- |
1.2 |
-- |
2 |
-- |
-- |
1.87/1.87/1.88 |
166 |
| E |
0.1 |
98.9 |
-- |
0.1 |
0.9 |
4 |
-- |
-- |
1.99/1.97/1.93 |
1020 |
| M |
3.8 |
*88.8 |
2.2 |
0.7 |
4.6 |
18 |
0.90 |
-- |
1.56/1.51/1.56 |
876 |
| Triple (561:746)711 |
|---|
| Aln |
AUA |
CAA |
CGA |
CGG |
GCA |
UAA |
UAC |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
6.1 |
13.1 |
*40.5 |
0.2 |
0.5 |
36.3 |
0.4 |
*1.4 |
0.4 |
1.2 |
30 |
0.42 |
-- |
0.68/0.65/1.78 |
6942 |
| 3 |
7.1 |
15.3 |
*46.9 |
0.2 |
0.5 |
27.7 |
0.1 |
*0.9 |
0.3 |
1.0 |
22 |
0.48 |
-- |
0.72/0.62/1.87 |
5904 |
| B |
9.0 |
0.2 |
*58.2 |
-- |
0.5 |
29.5 |
0.1 |
*1.1 |
0.3 |
1.0 |
19 |
0.60 |
-- |
0.64/0.64/1.88 |
4654 |
| A |
-- |
0.9 |
15.9 |
*5.9 |
2.3 |
*74.1 |
-- |
-- |
0.9 |
-- |
5 |
0.81 |
-- |
1.05/1.11/1.63 |
220 |
| C |
-- |
0.6 |
7.2 |
-- |
-- |
91.0 |
-- |
-- |
0.6 |
0.6 |
4 |
-- |
-- |
1.61/1.63/1.88 |
166 |
| E |
-- |
*86.6 |
2.3 |
-- |
-- |
9.3 |
-- |
0.2 |
0.3 |
1.3 |
11 |
-- |
-- |
1.52/1.73/1.93 |
1030 |
| M |
-- |
0.2 |
3.6 |
-- |
0.2 |
*84.1 |
2.9 |
5.4 |
0.7 |
3.0 |
20 |
-- |
-- |
1.60/1.58/1.31 |
873 |
Last modified on 01 November 2002.