16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (13/27)
| Triple (579:627)578 |
|---|
| Aln |
AUA |
AUC |
AUU |
CGA |
CGG |
GCA |
UUA |
UUG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*54.4 |
1.7 |
0.6 |
2.0 |
*10.6 |
0.8 |
0.2 |
0.2 |
27.6 |
1.8 |
38 |
0.90 |
0.90 |
-0.02/-0.03/-0.06 |
7233 |
| 3 |
*62.3 |
2.0 |
0.7 |
2.4 |
*12.7 |
1.0 |
0.1 |
0.1 |
17.3 |
1.5 |
31 |
0.91 |
0.91 |
0.31/0.29/0.24 |
6039 |
| B |
*75.0 |
2.1 |
0.8 |
2.9 |
*16.0 |
1.0 |
0.1 |
0.2 |
0.1 |
1.8 |
30 |
0.91 |
0.91 |
1.16/1.14/1.08 |
4765 |
| A |
*81.0 |
9.1 |
0.9 |
1.7 |
*0.4 |
5.2 |
-- |
-- |
-- |
1.7 |
10 |
-- |
-- |
1.54/1.48/1.42 |
232 |
| C |
*84.2 |
1.2 |
2.9 |
-- |
-- |
-- |
5.8 |
4.7 |
-- |
1.2 |
7 |
0.85 |
-- |
1.50/1.91/1.39 |
171 |
| E |
0.1 |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
99.8 |
0.1 |
2 |
-- |
-- |
-0.02/-0.03/-0.02 |
1042 |
| M |
*3.1 |
0.1 |
0.1 |
-- |
-- |
-- |
0.1 |
-- |
92.8 |
3.8 |
18 |
0.73 |
0.73 |
-0.33/-0.37/-0.38 |
1024 |
| Triple (637:735)737 |
|---|
| Aln |
GAC |
GGC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.1 |
*71.9 |
27.5 |
0.5 |
15 |
-- |
-- |
0.58/0.65/0.70 |
7223 |
| 3 |
-- |
*82.0 |
17.4 |
0.6 |
12 |
-- |
-- |
0.97/1.28/1.33 |
6030 |
| B |
-- |
99.1 |
0.2 |
0.7 |
10 |
-- |
-- |
1.95/1.98/1.95 |
4768 |
| A |
-- |
99.5 |
0.5 |
-- |
1 |
-- |
-- |
2.00/1.95/2.00 |
219 |
| C |
4.7 |
94.7 |
-- |
0.6 |
3 |
-- |
-- |
1.95/1.73/2.00 |
170 |
| E |
-- |
*0.5 |
99.3 |
0.2 |
3 |
0.86 |
0.86 |
-0.05/1.23/1.56 |
1044 |
| M |
0.1 |
*8.7 |
91.0 |
0.2 |
4 |
0.98 |
-- |
-0.32/-0.46/-0.59 |
1024 |
| Triple (659:697)760 |
|---|
| Aln |
AAA |
AAC |
ACC |
AGA |
AGC |
AGU |
AUA |
AUC |
GAC |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.6 |
1.2 |
0.4 |
*84.8 |
3.4 |
2.6 |
2.2 |
1.5 |
*0.3 |
1.3 |
1.6 |
35 |
-- |
-- |
1.83/1.41/1.41 |
7135 |
| 3 |
-- |
-- |
-- |
92.8 |
3.9 |
3.0 |
-- |
-- |
-- |
0.1 |
0.1 |
8 |
-- |
-- |
1.99/1.99/1.55 |
6042 |
| B |
-- |
-- |
-- |
99.8 |
-- |
-- |
-- |
-- |
-- |
0.1 |
0.1 |
4 |
-- |
-- |
1.98/1.99/1.98 |
4793 |
| A |
-- |
-- |
-- |
51.8 |
47.7 |
0.5 |
-- |
-- |
-- |
-- |
-- |
3 |
-- |
-- |
2.00/2.00/0.96 |
220 |
| C |
-- |
-- |
-- |
97.6 |
0.6 |
-- |
-- |
-- |
-- |
0.6 |
1.2 |
4 |
-- |
-- |
1.90/1.94/1.91 |
169 |
| E |
-- |
-- |
0.1 |
69.1 |
12.6 |
17.6 |
0.1 |
-- |
-- |
0.3 |
0.2 |
7 |
-- |
-- |
1.99/1.95/0.80 |
1030 |
| M |
5.0 |
9.5 |
2.9 |
*30.4 |
1.1 |
0.5 |
16.9 |
11.2 |
*2.2 |
8.4 |
11.9 |
35 |
0.36 |
-- |
1.20/-0.21/0.79 |
925 |
| Triple (670:686)683 |
|---|
| Aln |
AAA |
AAC |
AAG |
AAU |
ACU |
AGA |
AGG |
AGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.3 |
0.2 |
1.8 |
1.7 |
0.1 |
2.3 |
*63.1 |
16.0 |
13.8 |
0.6 |
19 |
-- |
-- |
1.71/0.88/0.53 |
7359 |
| 3 |
0.1 |
0.3 |
2.0 |
2.0 |
0.1 |
2.5 |
73.6 |
18.9 |
0.1 |
0.5 |
15 |
-- |
-- |
1.98/1.72/1.05 |
6082 |
| B |
-- |
-- |
2.3 |
-- |
-- |
2.8 |
91.3 |
3.4 |
-- |
0.3 |
9 |
-- |
-- |
1.98/1.83/1.60 |
4819 |
| A |
2.1 |
6.9 |
3.9 |
52.8 |
3.0 |
2.1 |
12.0 |
16.7 |
-- |
0.4 |
9 |
-- |
-- |
2.00/0.93/0.77 |
233 |
| C |
-- |
-- |
0.6 |
-- |
-- |
5.3 |
*88.3 |
2.3 |
-- |
3.5 |
8 |
0.89 |
-- |
1.95/1.73/1.44 |
171 |
| E |
-- |
-- |
0.4 |
-- |
-- |
1.4 |
4.9 |
91.5 |
0.4 |
1.5 |
6 |
-- |
-- |
1.96/1.95/1.49 |
1031 |
| M |
1.3 |
-- |
0.5 |
0.3 |
-- |
0.8 |
2.0 |
2.7 |
91.4 |
1.0 |
10 |
-- |
-- |
0.64/-0.43/-0.62 |
1107 |
Last modified on 01 November 2002.