16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (15/27)
| Triple (770:778)677 |
|---|
| Aln |
ACA |
ACG |
ACU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
89.7 |
8.2 |
0.3 |
0.4 |
1.4 |
13 |
-- |
-- |
1.86/1.94/1.51 |
7077 |
| 3 |
90.0 |
8.5 |
-- |
0.1 |
1.4 |
10 |
-- |
-- |
1.89/1.99/1.53 |
6021 |
| B |
87.5 |
10.6 |
-- |
0.1 |
1.8 |
10 |
-- |
-- |
1.86/1.98/1.45 |
4765 |
| A |
98.6 |
1.4 |
-- |
-- |
-- |
2 |
-- |
-- |
2.00/2.00/1.90 |
221 |
| C |
99.4 |
-- |
-- |
-- |
0.6 |
2 |
-- |
-- |
2.00/1.95/2.00 |
170 |
| E |
99.5 |
0.3 |
-- |
-- |
0.2 |
4 |
-- |
-- |
1.99/2.00/1.96 |
1036 |
| M |
86.1 |
8.2 |
2.0 |
2.3 |
1.4 |
11 |
-- |
-- |
1.77/1.74/1.39 |
887 |
| Triple (810:849)836 |
|---|
| Aln |
CAA |
CAC |
CAG |
CGA |
UAA |
UAC |
UAG |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.7 |
2.1 |
0.4 |
*0.5 |
18.4 |
*32.1 |
9.4 |
20.2 |
12.9 |
2.3 |
39 |
0.38 |
-- |
1.22/1.37/-0.43 |
7177 |
| 3 |
1.5 |
2.6 |
0.5 |
*0.6 |
20.7 |
*38.5 |
11.2 |
22.0 |
0.4 |
2.0 |
34 |
0.39 |
-- |
1.59/1.81/0.11 |
5916 |
| B |
1.3 |
2.6 |
-- |
-- |
17.1 |
*42.9 |
11.4 |
23.9 |
0.3 |
0.4 |
12 |
-- |
-- |
1.73/1.95/0.15 |
4667 |
| A |
-- |
-- |
-- |
-- |
32.0 |
34.2 |
4.3 |
29.4 |
-- |
-- |
4 |
-- |
-- |
2.00/2.00/0.23 |
231 |
| C |
-- |
-- |
-- |
-- |
14.1 |
2.4 |
2.9 |
75.3 |
2.9 |
2.4 |
7 |
-- |
-- |
1.87/1.78/0.83 |
170 |
| E |
2.8 |
2.9 |
2.6 |
3.3 |
*34.8 |
19.3 |
12.1 |
11.5 |
1.0 |
9.7 |
32 |
0.37 |
-- |
1.07/1.34/0.15 |
1018 |
| M |
3.0 |
0.1 |
-- |
0.4 |
*6.7 |
2.0 |
0.7 |
1.6 |
82.0 |
3.5 |
19 |
0.40 |
-- |
-0.06/-0.13/-0.58 |
1092 |
| Triple (868:884)867 |
|---|
| Aln |
UAC |
UAG |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
15.3 |
82.7 |
1.1 |
0.2 |
0.7 |
17 |
-- |
-- |
1.95/1.94/1.27 |
6884 |
| 3 |
2.1 |
96.7 |
0.4 |
0.1 |
0.7 |
16 |
-- |
-- |
1.94/1.96/1.78 |
5572 |
| B |
2.7 |
96.3 |
0.4 |
0.2 |
0.4 |
13 |
-- |
-- |
1.95/1.97/1.77 |
4362 |
| A |
-- |
99.1 |
-- |
-- |
0.9 |
2 |
-- |
-- |
2.00/2.00/1.93 |
218 |
| C |
1.2 |
96.4 |
1.2 |
1.2 |
-- |
3 |
-- |
-- |
1.88/1.88/1.70 |
168 |
| E |
0.1 |
98.9 |
0.1 |
0.2 |
0.7 |
5 |
-- |
-- |
1.98/1.93/1.98 |
992 |
| M |
81.4 |
11.7 |
4.8 |
0.4 |
1.7 |
8 |
-- |
-- |
1.94/1.90/1.08 |
1145 |
| Triple (899:1377)1380 |
|---|
| Aln |
GCA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
99.2 |
0.4 |
0.4 |
9 |
-- |
-- |
1.94/1.99/1.97 |
5964 |
| 3 |
99.4 |
0.2 |
0.3 |
7 |
-- |
-- |
1.96/1.99/1.98 |
4937 |
| B |
99.4 |
0.3 |
0.3 |
7 |
-- |
-- |
1.96/1.99/1.98 |
3789 |
| A |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
172 |
| C |
98.7 |
1.3 |
-- |
1 |
-- |
-- |
1.88/2.00/2.00 |
158 |
| E |
99.4 |
0.3 |
0.3 |
3 |
-- |
-- |
1.95/1.99/1.98 |
976 |
| M |
98.3 |
0.9 |
0.8 |
5 |
-- |
-- |
1.91/1.97/1.91 |
870 |
Last modified on 01 November 2002.