16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (18/27)
| Triple (962:1201)935 |
|---|
| Aln |
CGA |
GCA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*97.5 |
0.3 |
1.0 |
0.4 |
0.8 |
18 |
-- |
-- |
1.86/1.83/1.94 |
6575 |
| 3 |
98.5 |
0.4 |
0.5 |
0.3 |
0.4 |
11 |
-- |
-- |
1.91/1.89/1.98 |
5269 |
| B |
99.6 |
-- |
-- |
0.2 |
0.2 |
7 |
-- |
-- |
1.99/1.99/1.97 |
4088 |
| A |
97.8 |
-- |
0.5 |
-- |
1.6 |
3 |
-- |
-- |
1.86/1.96/2.00 |
185 |
| C |
97.6 |
-- |
-- |
1.2 |
1.2 |
2 |
-- |
-- |
1.88/1.81/1.88 |
166 |
| E |
94.4 |
2.1 |
2.4 |
0.4 |
0.7 |
6 |
-- |
-- |
1.66/1.63/1.99 |
992 |
| M |
*93.2 |
-- |
3.3 |
0.8 |
2.7 |
14 |
0.94 |
-- |
1.70/1.61/1.83 |
1141 |
| Triple (963:1200)992 |
|---|
| Aln |
AUA |
AUC |
AUU |
CGA |
GCA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*38.4 |
1.7 |
2.0 |
2.9 |
1.0 |
29.5 |
21.1 |
3.3 |
38 |
0.50 |
-- |
0.63/0.61/0.47 |
6834 |
| 3 |
*37.2 |
0.1 |
0.3 |
3.1 |
0.3 |
35.5 |
22.5 |
1.0 |
19 |
-- |
-- |
0.65/0.64/0.72 |
5528 |
| B |
*47.9 |
0.2 |
0.4 |
4.0 |
0.4 |
45.7 |
0.1 |
1.3 |
19 |
-- |
-- |
0.75/0.74/1.88 |
4290 |
| A |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.52/0.52/0.00 |
204 |
| C |
*90.4 |
-- |
4.8 |
-- |
-- |
1.2 |
2.4 |
1.2 |
5 |
0.93 |
-- |
1.70/1.79/1.49 |
166 |
| E |
-- |
-- |
-- |
-- |
-- |
0.1 |
99.9 |
-- |
1 |
-- |
-- |
1.50/1.49/-0.01 |
1029 |
| M |
*36.9 |
9.8 |
10.2 |
2.5 |
4.6 |
4.6 |
16.7 |
14.7 |
36 |
0.48 |
-- |
0.66/0.65/-0.21 |
1141 |
| Triple (964:1199)993 |
|---|
| Aln |
AUA |
AUG |
AUU |
CGA |
CGC |
CGU |
GCA |
GCG |
UAA |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*6.7 |
18.4 |
0.7 |
2.2 |
*1.8 |
2.8 |
8.2 |
*29.4 |
0.5 |
*3.7 |
21.7 |
3.8 |
48 |
0.53 |
-- |
0.45/0.44/-0.27 |
6828 |
| 3 |
*8.0 |
22.7 |
-- |
0.7 |
-- |
-- |
7.7 |
*36.1 |
0.1 |
-- |
22.5 |
2.0 |
23 |
0.57 |
-- |
0.93/0.91/0.19 |
5521 |
| B |
*10.4 |
29.3 |
-- |
1.0 |
-- |
-- |
10.0 |
*46.6 |
0.1 |
-- |
0.1 |
2.6 |
23 |
0.57 |
-- |
0.85/0.85/1.21 |
4281 |
| A |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
1.96/1.70/0.00 |
204 |
| C |
6.0 |
0.6 |
*1.2 |
-- |
-- |
-- |
*76.5 |
10.2 |
-- |
-- |
2.4 |
3.0 |
8 |
0.80 |
-- |
1.36/1.47/1.09 |
166 |
| E |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
0.1 |
-- |
-- |
99.9 |
-- |
1 |
-- |
-- |
1.80/1.65/-0.01 |
1029 |
| M |
0.4 |
*0.2 |
4.2 |
9.4 |
*10.9 |
16.5 |
*0.7 |
0.2 |
2.2 |
*22.4 |
20.5 |
12.4 |
36 |
0.43 |
-- |
0.39/0.36/-0.29 |
1142 |
| Triple (973:1027)970 |
|---|
| Aln |
ACG |
UAA |
UCG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*62.3 |
*1.5 |
0.7 |
33.0 |
2.6 |
22 |
0.95 |
-- |
0.19/0.62/0.79 |
6961 |
| 3 |
*73.4 |
*1.8 |
0.1 |
22.0 |
2.8 |
18 |
0.96 |
0.96 |
0.56/0.47/0.68 |
5650 |
| B |
*94.0 |
*2.2 |
0.1 |
0.1 |
3.6 |
18 |
0.96 |
0.96 |
1.68/1.61/1.82 |
4413 |
| A |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.00/2.00/0.00 |
204 |
| C |
89.8 |
-- |
1.8 |
4.2 |
4.2 |
7 |
-- |
-- |
1.49/1.62/1.66 |
167 |
| E |
0.1 |
-- |
-- |
99.9 |
-- |
1 |
-- |
-- |
-0.01/-0.02/-0.01 |
1029 |
| M |
3.5 |
0.3 |
*3.7 |
91.1 |
1.5 |
10 |
0.42 |
-- |
-0.39/1.39/1.57 |
1145 |
Last modified on 01 November 2002.