16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (19/27)
| Triple (974:1026)969 |
|---|
| Aln |
AAU |
GAU |
GCU |
UAA |
UAU |
UGU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.7 |
0.1 |
1.5 |
0.1 |
*59.9 |
3.2 |
33.3 |
1.1 |
30 |
0.01 |
-- |
0.21/0.08/0.57 |
6940 |
| 3 |
-- |
0.1 |
1.8 |
0.1 |
*70.8 |
3.9 |
22.1 |
1.1 |
25 |
0.92 |
-- |
0.62/0.41/0.70 |
5629 |
| B |
-- |
0.1 |
2.3 |
0.1 |
*90.8 |
5.0 |
0.3 |
1.4 |
25 |
0.92 |
-- |
1.73/1.47/1.85 |
4393 |
| A |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.00/0.00/0.00 |
204 |
| C |
1.2 |
3.6 |
-- |
2.4 |
*86.8 |
-- |
1.8 |
4.2 |
8 |
0.89 |
-- |
1.42/1.58/1.63 |
167 |
| E |
-- |
-- |
-- |
-- |
0.1 |
-- |
99.9 |
-- |
1 |
-- |
-- |
-0.01/-0.01/-0.01 |
1029 |
| M |
*3.7 |
0.1 |
0.2 |
-- |
2.6 |
0.3 |
92.7 |
0.5 |
10 |
0.51 |
-- |
-0.38/-0.31/0.72 |
1145 |
| Triple (980:1020)981 |
|---|
| Aln |
AUG |
AUU |
CGG |
CGU |
GCA |
GCG |
GCU |
GUG |
UAG |
UGG |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
11.3 |
3.7 |
4.8 |
*3.7 |
1.5 |
*16.1 |
2.6 |
2.4 |
11.9 |
1.8 |
34.1 |
6.1 |
53 |
0.31 |
-- |
-0.87/-0.90/-0.34 |
6937 |
| 3 |
13.7 |
*4.6 |
4.6 |
4.4 |
1.8 |
*19.9 |
3.1 |
3.0 |
14.6 |
2.0 |
22.1 |
6.2 |
48 |
0.33 |
-- |
-0.69/-0.72/-0.05 |
5626 |
| B |
17.6 |
*5.8 |
5.9 |
5.6 |
2.4 |
*25.4 |
4.0 |
3.8 |
18.6 |
2.6 |
0.3 |
8.0 |
48 |
0.33 |
-- |
0.09/ 0.02/ 0.90 |
4393 |
| A |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.00/ 0.00/ 0.00 |
204 |
| C |
6.6 |
0.6 |
*44.3 |
5.4 |
0.6 |
3.0 |
0.6 |
-- |
3.6 |
4.8 |
3.0 |
27.5 |
23 |
0.52 |
-- |
0.26/ 0.43/ 0.46 |
167 |
| E |
-- |
-- |
-- |
-- |
-- |
0.1 |
-- |
-- |
-- |
-- |
99.9 |
-- |
1 |
-- |
-- |
-0.01/-0.01/-0.01 |
1029 |
| M |
-- |
-- |
-- |
0.2 |
-- |
*0.1 |
0.1 |
-- |
-- |
-- |
97.5 |
2.2 |
9 |
0.55 |
-- |
-0.31/-0.23/-0.25 |
1145 |
| Triple (1004:1017)982 |
|---|
| Aln |
CGA |
CGC |
CGU |
GAA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
6.5 |
*4.5 |
2.6 |
*19.4 |
1.4 |
61.1 |
4.6 |
43 |
0.62 |
-- |
-0.72/-0.63/-0.34 |
6940 |
| 3 |
8.0 |
*5.6 |
3.1 |
*22.0 |
1.7 |
54.5 |
5.2 |
37 |
0.61 |
-- |
-0.69/-0.59/-0.07 |
5630 |
| B |
10.2 |
*7.1 |
4.0 |
*28.2 |
2.1 |
41.8 |
6.6 |
37 |
0.61 |
-- |
-0.58/-0.43/0.79 |
4397 |
| A |
-- |
-- |
-- |
-- |
-- |
100.0 |
-- |
0 |
-- |
-- |
0.00/0.00/0.00 |
204 |
| C |
-- |
-- |
1.2 |
*64.5 |
3.0 |
18.7 |
12.7 |
14 |
0.81 |
-- |
0.26/0.65/0.80 |
166 |
| E |
-- |
-- |
-- |
0.1 |
-- |
99.9 |
-- |
1 |
-- |
-- |
-0.01/-0.01/-0.01 |
1029 |
| M |
-- |
-- |
-- |
0.1 |
-- |
99.5 |
0.4 |
4 |
0.67 |
-- |
-0.05/-0.04/-0.19 |
1145 |
Last modified on 01 November 2002.