16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (24/27)
| Triple (1296:1300)1341 |
|---|
| Aln |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
*98.5 |
0.3 |
1.2 |
15 |
-- |
-- |
1.95/1.94/1.92 |
6990 |
| 3 |
99.3 |
0.1 |
0.6 |
9 |
-- |
-- |
1.99/1.97/1.96 |
5757 |
| B |
99.4 |
0.1 |
0.5 |
8 |
-- |
-- |
1.99/1.97/1.97 |
4529 |
| A |
98.6 |
-- |
1.4 |
3 |
-- |
-- |
2.00/1.96/1.92 |
207 |
| C |
98.3 |
0.6 |
1.2 |
3 |
-- |
-- |
1.88/1.94/1.95 |
172 |
| E |
99.1 |
0.1 |
0.8 |
4 |
-- |
-- |
1.98/1.99/1.93 |
1020 |
| M |
*94.2 |
1.1 |
4.7 |
15 |
-- |
-- |
1.80/1.83/1.75 |
1063 |
| Triple (1296:1300)1342 |
|---|
| Aln |
UAA |
UAC |
UAG |
UAU |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
2.3 |
1.9 |
*78.1 |
16.6 |
0.4 |
0.7 |
20 |
-- |
-- |
1.95/1.94/1.03 |
7033 |
| 3 |
2.1 |
1.6 |
78.8 |
17.0 |
0.1 |
0.3 |
10 |
-- |
-- |
1.99/1.97/1.07 |
5800 |
| B |
0.1 |
0.2 |
98.9 |
0.3 |
0.1 |
0.3 |
8 |
-- |
-- |
1.99/1.97/1.92 |
4573 |
| A |
40.3 |
19.9 |
13.6 |
25.7 |
-- |
0.5 |
5 |
-- |
-- |
2.00/1.96/0.11 |
206 |
| C |
0.6 |
-- |
95.9 |
1.7 |
1.2 |
0.6 |
4 |
-- |
-- |
1.88/1.94/1.76 |
172 |
| E |
3.3 |
4.0 |
2.2 |
90.1 |
0.2 |
0.2 |
6 |
-- |
-- |
1.98/1.99/1.38 |
1020 |
| M |
3.9 |
3.9 |
*71.5 |
16.5 |
1.7 |
2.6 |
18 |
-- |
-- |
1.80/1.83/0.78 |
1063 |
| Triple (1329:1356)1328 |
|---|
| Aln |
UAG |
UUG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
99.0 |
0.4 |
0.1 |
0.4 |
10 |
-- |
-- |
1.98/1.92/1.98 |
6877 |
| 3 |
99.1 |
0.4 |
0.1 |
0.3 |
8 |
-- |
-- |
1.98/1.93/1.98 |
5737 |
| B |
99.7 |
0.1 |
-- |
0.2 |
7 |
-- |
-- |
1.99/1.98/1.99 |
4506 |
| A |
99.5 |
-- |
0.5 |
-- |
1 |
-- |
-- |
2.00/2.00/1.95 |
205 |
| C |
100.0 |
-- |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
172 |
| E |
96.6 |
2.0 |
0.3 |
1.1 |
4 |
-- |
-- |
1.95/1.76/1.97 |
1025 |
| M |
98.1 |
0.6 |
0.2 |
1.0 |
6 |
-- |
-- |
1.97/1.88/1.95 |
970 |
| Triple (1333:1352)1268 |
|---|
| Aln |
CGA |
gap |
Other |
N |
CovT1 |
CovT2 |
Conservation |
Seq |
|---|
| T |
*68.5 |
29.8 |
1.6 |
15 |
-- |
-- |
1.14/ 1.16/ 0.50 |
7046 |
| 3 |
*80.4 |
17.8 |
1.8 |
14 |
-- |
-- |
1.72/ 1.73/ 0.94 |
5731 |
| B |
97.9 |
0.1 |
2.0 |
9 |
-- |
-- |
1.88/ 1.89/ 1.94 |
4502 |
| A |
95.5 |
-- |
4.5 |
4 |
-- |
-- |
1.82/ 1.86/ 2.00 |
202 |
| C |
97.1 |
2.9 |
-- |
1 |
-- |
-- |
2.00/ 2.00/ 1.75 |
172 |
| E |
*0.9 |
98.6 |
0.5 |
6 |
0.71 |
-- |
1.25/ 1.26/-0.09 |
1026 |
| M |
4.8 |
94.2 |
1.0 |
4 |
-- |
-- |
0.06/ 0.03/-0.24 |
1145 |
| Triple (1337:1348)952 |
|---|
| Aln |
AUA |
AUG |
AUU |
CGG |
GCA |
GCG |
GCU |
GUA |
UAG |
UGG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
12.8 |
*9.7 |
4.5 |
2.7 |
*46.4 |
5.6 |
8.3 |
1.3 |
2.8 |
1.8 |
0.3 |
3.8 |
39 |
0.56 |
-- |
0.64/0.62/0.64 |
6627 |
| 3 |
14.6 |
*11.8 |
-- |
3.3 |
*53.6 |
6.8 |
-- |
1.6 |
3.4 |
2.2 |
0.1 |
2.7 |
22 |
0.65 |
-- |
0.62/0.59/1.14 |
5419 |
| B |
18.7 |
0.8 |
-- |
2.8 |
*68.8 |
0.2 |
-- |
2.0 |
*3.9 |
-- |
0.2 |
2.7 |
18 |
0.73 |
-- |
0.79/0.75/1.59 |
4217 |
| A |
-- |
-- |
-- |
21.2 |
-- |
21.2 |
-- |
-- |
3.1 |
54.4 |
-- |
-- |
4 |
-- |
-- |
0.62/0.93/2.00 |
193 |
| C |
9.7 |
-- |
*1.2 |
-- |
*86.1 |
-- |
1.8 |
-- |
-- |
-- |
1.2 |
-- |
4 |
0.88 |
-- |
1.52/1.52/1.69 |
165 |
| E |
0.1 |
*60.1 |
-- |
2.0 |
*0.4 |
32.0 |
-- |
-- |
1.2 |
1.2 |
0.1 |
3.0 |
13 |
-- |
-- |
0.74/0.77/1.93 |
1010 |
| M |
*3.9 |
0.5 |
28.7 |
-- |
3.0 |
-- |
*52.7 |
0.2 |
*0.1 |
0.1 |
0.6 |
10.3 |
28 |
0.57 |
-- |
0.72/0.80/1.41 |
1043 |
Last modified on 01 November 2002.