16S rRNA Thermus thermophilus Comparative/Crystal Structure Base Triple Frequencies (25/27)
| Triple (1338:1347)952 |
|---|
| Aln |
AAU |
AGA |
AGG |
AGU |
AUG |
CGG |
GAA |
GCG |
UAG |
UGG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
1.3 |
*55.7 |
5.0 |
11.8 |
0.6 |
0.3 |
5.9 |
*14.5 |
1.7 |
0.5 |
0.3 |
2.4 |
38 |
0.70 |
-- |
1.01/0.88/0.64 |
6638 |
| 3 |
-- |
*66.8 |
6.0 |
-- |
0.7 |
0.4 |
4.5 |
*17.7 |
2.1 |
0.6 |
0.1 |
1.0 |
21 |
0.85 |
0.85 |
1.00/0.90/1.14 |
5416 |
| B |
-- |
85.9 |
7.7 |
-- |
-- |
-- |
5.8 |
-- |
-- |
-- |
0.2 |
0.5 |
10 |
-- |
-- |
1.63/1.62/1.59 |
4210 |
| A |
-- |
-- |
-- |
-- |
2.0 |
6.1 |
-- |
58.4 |
33.5 |
-- |
-- |
-- |
4 |
-- |
-- |
0.66/0.66/2.00 |
197 |
| C |
1.8 |
4.2 |
-- |
-- |
-- |
-- |
89.7 |
-- |
-- |
-- |
1.8 |
2.4 |
6 |
-- |
-- |
1.54/1.69/1.69 |
165 |
| E |
-- |
*0.1 |
0.2 |
-- |
3.5 |
0.9 |
-- |
*83.7 |
4.7 |
3.2 |
0.4 |
3.5 |
14 |
-- |
-- |
1.18/1.11/1.93 |
1010 |
| M |
7.7 |
7.2 |
0.8 |
*73.9 |
0.2 |
-- |
-- |
-- |
-- |
-- |
0.5 |
9.8 |
24 |
-- |
-- |
1.45/1.36/1.41 |
1057 |
| Triple (1384:1477)1376 |
|---|
| Aln |
CAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
99.0 |
0.3 |
0.7 |
9 |
-- |
-- |
1.94/1.94/1.97 |
3764 |
| 3 |
99.2 |
0.3 |
0.5 |
7 |
-- |
-- |
1.95/1.95/1.98 |
2835 |
| B |
99.3 |
0.2 |
0.5 |
5 |
-- |
-- |
1.95/1.95/1.97 |
1867 |
| A |
98.1 |
1.9 |
-- |
1 |
-- |
-- |
2.00/1.83/2.00 |
106 |
| C |
100.0 |
-- |
-- |
1 |
-- |
-- |
2.00/2.00/2.00 |
144 |
| E |
99.3 |
0.2 |
0.5 |
4 |
-- |
-- |
1.96/1.96/1.99 |
861 |
| M |
98.3 |
0.3 |
1.4 |
5 |
-- |
-- |
1.88/1.91/1.96 |
787 |
| Triple (1385:1475)773 |
|---|
| Aln |
CAA |
CUA |
UAA |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.5 |
*96.5 |
0.9 |
1.2 |
1.0 |
11 |
-- |
-- |
1.88/1.83/1.91 |
3712 |
| 3 |
0.4 |
98.6 |
-- |
0.5 |
0.6 |
6 |
-- |
-- |
1.96/1.91/1.96 |
2795 |
| B |
0.4 |
98.6 |
-- |
0.5 |
0.5 |
5 |
-- |
-- |
1.96/1.91/1.97 |
1834 |
| A |
-- |
98.1 |
-- |
1.9 |
-- |
1 |
-- |
-- |
2.00/1.83/1.96 |
106 |
| C |
2.0 |
97.3 |
-- |
0.7 |
-- |
2 |
-- |
-- |
1.93/1.86/2.00 |
147 |
| E |
0.4 |
98.5 |
-- |
0.4 |
0.8 |
6 |
-- |
-- |
1.98/1.93/1.93 |
855 |
| M |
0.5 |
*89.1 |
4.3 |
3.4 |
2.7 |
8 |
0.94 |
-- |
1.59/1.63/1.65 |
771 |
| Triple (1385:1475)774 |
|---|
| Aln |
CAG |
CUG |
UAG |
gap |
Other |
N |
Cov1 |
Cov2 |
Conservation |
Seq |
|---|
| T |
0.5 |
96.8 |
1.2 |
1.0 |
0.5 |
9 |
-- |
-- |
1.88/1.83/1.95 |
3705 |
| 3 |
0.4 |
98.9 |
-- |
0.3 |
0.4 |
5 |
-- |
-- |
1.96/1.91/1.99 |
2788 |
| B |
0.4 |
98.9 |
-- |
0.3 |
0.4 |
5 |
-- |
-- |
1.96/1.91/1.98 |
1828 |
| A |
-- |
98.1 |
-- |
1.9 |
-- |
1 |
-- |
-- |
2.00/1.83/2.00 |
106 |
| C |
2.0 |
96.6 |
-- |
0.7 |
0.7 |
3 |
-- |
-- |
1.93/1.86/1.95 |
147 |
| E |
0.4 |
99.1 |
-- |
0.2 |
0.4 |
4 |
-- |
-- |
1.98/1.93/2.00 |
854 |
| M |
0.5 |
89.4 |
5.7 |
3.4 |
1.0 |
6 |
-- |
-- |
1.59/1.63/1.76 |
771 |
Last modified on 01 November 2002.